BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg479178 Length=1505 Score E Sequences producing significant alignments: (Bits) Value AT3G17090.1 | Symbols: | Protein phosphatase 2C family protein... 2377 0.0 > AT3G17090.1 | Symbols: | Protein phosphatase 2C family protein | chr3:5826803-5829633 FORWARD LENGTH=1642 Length=1642 Score = 2377 bits (1287), Expect = 0.0 Identities = 1438/1510 (95%), Gaps = 14/1510 (1%) Strand=Plus/Plus Query 1 ATCTTCCCTTCCATTAAGACCTAGGGTTTTCTCTCTCTCCCATCATTCTCTTCTCCCGAT 60 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 ATCATCCCTTCCATTAAGACCTAGGGTTTTCTCTCTCTCCCATCATTCTCTTCTCCCGAT 60 Query 61 CTCATTTCCATTACCCAATCCCGCTCCTTTATCTCTAATTTGTGAATCGAACCCTTAATA 120 |||||||||||||||||||||||||||||| ||||| |||| |||||||||||||||||| Sbjct 61 CTCATTTCCATTACCCAATCCCGCTCCTTT-TCTCTGATTT-TGAATCGAACCCTTAATA 118 Query 121 CCCAACAAATCTCACGGTTCCGAGGAGTGGGTTTT-GGGG-TTAGGGTTTTCGAGAGATG 178 |||| ||||||||||||||||||||||||||||| |||| ||||||||||||||||||| Sbjct 119 CCCAG-AAATCTCACGGTTCCGAGGAGTGGGTTTTTGGGGGTTAGGGTTTTCGAGAGATG 177 Query 179 TTGAATGTCAGGTTCATTGATGAATCTGTTTTCTCTCTGCTTCAAGCCATTCGGGCACAT 238 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 178 TTGAATGTCAGGTTCATTGATGAATCTGTTTTCTCTCTGCTTCAAGCCATTCGGGCACGT 237 Query 239 CTGTGATAATTCCGAAGCTGGATCGGGTGGTGGTGGTGGCGTTTCTGGTGGAAGCGGTGG 298 ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| || Sbjct 238 CTGTGATAATTCCGAAGCTGGATCGGGTGGTGGTGGTGGCGTTTCTGGTGGAACCGGCGG 297 Query 299 TGAAGGCAAAGACGGACTT-CTTTGGTTTCGTGATCTCGGTAAATATTGCGGCGGAGATT 357 |||||||||||||||| || |||||||| ||||||||||||||||||||||||||||||| Sbjct 298 TGAAGGCAAAGACGGA-TTGCTTTGGTTCCGTGATCTCGGTAAATATTGCGGCGGAGATT 356 Query 358 TCTCCATGGCTGTGATTCAAGCCAATCAGGTTCTTGAAGATCAGAGCCAGATCGAATCCG 417 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 357 TCTCCATGGCTGTGATTCAAGCCAATCAGGTTCTTGAAGATCAGAGCCAGGTCGAATCCG 416 Query 418 GTAATTTCGGGACTTTCGTTGGTGTTTACGATGGTCATGGTGGCCCTGAAGCTGCTCGTT 477 ||||||| |||||||| |||||||||||||||||||||||||| |||||||||||||||| Sbjct 417 GTAATTTTGGGACTTTTGTTGGTGTTTACGATGGTCATGGTGGTCCTGAAGCTGCTCGTT 476 Query 478 ATGTCTGTGATCATCTCTTTAACCATTTTCGAGAAATATCAGCGGAGACGCAAGGAGTTG 537 |||||||||||||||||||||||||||||||||||||||||||||| || |||||||||| Sbjct 477 ATGTCTGTGATCATCTCTTTAACCATTTTCGAGAAATATCAGCGGAAACACAAGGAGTTG 536 Query 538 TGACAAGAGAGACAATACAAAGAGCCTTTCATGCGACCGAAGAAGGATTTGCTTCCATTG 597 |||| |||||||| ||| ||||||||||||||||||| ||||||||||| |||||||||| Sbjct 537 TGACGAGAGAGACGATAGAAAGAGCCTTTCATGCGACAGAAGAAGGATTCGCTTCCATTG 596 Query 598 TGTCAGAGCTGTGGCAAGAAATACCAAATTTGGCAACTGTTGGCACTTGTTGTCTAGTTG 657 ||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||| Sbjct 597 TGTCAGAGCTGTGGCAAGAAATACCAAATTTGGCAACTGTTGGCACTTGTTGTTTGGTTG 656 Query 658 GAGTGATATATCAAAATACTCTTTTCGTGGCTAGCCTCGGAGATTCACGGGTTGTTCTTG 717 ||||||||||||||||||||||||| ||||| || || |||||||||||||||||||||| Sbjct 657 GAGTGATATATCAAAATACTCTTTTTGTGGCAAGTCTTGGAGATTCACGGGTTGTTCTTG 716 Query 718 GAAAGAAAGGCAACTGTGGCGGACTCTCTGCTATTCAGCTGTCGACTGAACACAATGCCA 777 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 717 GAAAGAAAGGCAACTGTGGCGGACTCTCTGCTATTCAGCTGTCGACTGAACACAATGCTA 776 Query 778 ACAACGAGGATATTCGTTGGGAACTCAAGGACTTACATCCTGATGACCCACAGATCGTTG 837 |||| || ||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 777 ACAATGAAGATATTCGTTGGGAACTCAAGGACTTACATCCTGATGACCCGCAGATCGTTG 836 Query 838 TGTTCAGGCATGGAGTTTGGAGAGTTAAAGGCATCATTCAGGTTTCGAGGTCTATAGGAG 897 |||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||| Sbjct 837 TGTTCAGGCATGGAGTTTGGAGAGTTAAGGGCATCATTCAGGTATCGAGGTCTATAGGAG 896 Query 898 ACATGTACATGAAACGGCCTGAATTTAACAAGGAGCCAATCAGTCAAAAGTTCAGACTTG 957 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||| Sbjct 897 ACATGTACATGAAACGGCCCGAATTTAACAAGGAGCCAATCAGTCAAAAGTTCAGAATTG 956 Query 958 CAGAGCCAATGAAGAGACCATTGATGTCTGCAACACCGACCATACTTTCTCATCCTCTGC 1017 ||||||||||||| ||||| ||||||||||||||||| || ||||| ||||||||||||| Sbjct 957 CAGAGCCAATGAAAAGACCCTTGATGTCTGCAACACCAACAATACTCTCTCATCCTCTGC 1016 Query 1018 ATCCTAATGATTCGTTTCTCATTTTTGCGTCGGATGGTCTTTGGGAACATTTGACTAACG 1077 | |||||||||||||||||||||||||| || |||||||||||||| ||||||||||||| Sbjct 1017 ACCCTAATGATTCGTTTCTCATTTTTGCATCTGATGGTCTTTGGGAGCATTTGACTAACG 1076 Query 1078 AAAAAGCAGTTGAGATTGTTCATAACCATCCCCGTGCTGGAAGCGCAAAGAGACTGATAA 1137 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1077 AAAAAGCAGTTGAGATTGTTCATAACCATCCCCGTGCTGGAAGCGCAAAGAGACTGATAA 1136 Query 1138 AAGCTGCTCTTCACGAGGCAGCGAGGAAACGTGAGATGAGATATTCAGATCTAAGGAAGA 1197 | || ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1137 AGGCGGCTCTTCACGAGGCAGCGAGGAAACGTGAGATGAGATATTCAGATCTAAGGAAGA 1196 Query 1198 TTGACAAGAAAGTGAGACGCCATTTTCACGATGACATCACGGTTATAGTGGTGTTCTTGA 1257 ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| Sbjct 1197 TTGACAAGAAAGTGAGACGACATTTTCATGATGACATCACGGTTATAGTGGTGTTCTTGA 1256 Query 1258 ACCATGACCTCATATCCAGAGGCCACATCAACACAACCCAAGACACAACAGTCTCTATAC 1317 |||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||| Sbjct 1257 ACCATGACCTCATATCGAGAGGCCACATCAACTCAACCCAAGACACAACAGTCTCTATAC 1316 Query 1318 GGAGTGCTCTTGAACACTGAAAA-CCAAAAACATTTTACAACAATGTTTCTTATTACTTG 1376 |||||||||||||||||||| || || ||| ||||||||||||||||||||| ||||||| Sbjct 1317 GGAGTGCTCTTGAACACTGAGAATCCCAAA-CATTTTACAACAATGTTTCTTCTTACTTG 1375 Query 1377 GTTATATGACTTTTGCCTAGAATGAATAAAAGCTAGGCAACATATGGaaaaaaaaaaaca 1436 |||||||||||||||||||||||||||||| ||||||||||||||||||| || Sbjct 1376 ATTATATGACTTTTGCCTAGAATGAATAAAAAAAAGGCAACATATGGAAAAAAC----CA 1431 Query 1437 aaaatgaaaaaa-CGACATCATTATCGTACGTAATGAGTTATCTCTTGTCTTAAGCGGCT 1495 |||||||||||| | ||||||||||||||||||||||||| |||||||| |||||||||| Sbjct 1432 AAAATGAAAAAAACAACATCATTATCGTACGTAATGAGTTCTCTCTTGTATTAAGCGGCT 1491 Query 1496 ATGTTTGACT 1505 |||||||||| Sbjct 1492 ATGTTTGACT 1501 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 74246606055 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5