BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg479190

Length=1437
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  AT3G17180.1 | Symbols: scpl33 | serine carboxypeptidase-like 33...  2322    0.0  


> AT3G17180.1 | Symbols: scpl33 | serine carboxypeptidase-like 
33 | chr3:5855861-5859157 REVERSE LENGTH=1437
Length=1437

 Score = 2322 bits (1257),  Expect = 0.0
 Identities = 1378/1438 (96%), Gaps = 2/1438 (0%)
 Strand=Plus/Plus

Query  1     ATGAATTTGACTCTTCCGATGAAAAAACAAAATTTTCTGCTAATCATCTCATTATTGATA  60
             ||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct  1     ATGAATTTGACACTTCCGATGAAAAAACAAAAATTTCTGCTAATCATCTCATTATTGATA  60

Query  61    TTATTATCATTACTTCATCAAGATTATCACATTGACGCTCAGAATTCAGACAAAGTAGTG  120
             ||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| 
Sbjct  61    TTATTATCATTACTTCATCAAGATTATCACATTGAAGCTCAAAATTCAGACAAAGTAGTC  120

Query  121   AATCTTCCTCAACAACCATTGAATCCTAAGATCTCTCACGTCTCAGGATATATCAACGTG  180
             ||||||||| |||||||| |||| || |||||||||||  ||||||| ||| ||||||| 
Sbjct  121   AATCTTCCTGAACAACCACTGAACCCAAAGATCTCTCATTTCTCAGGTTATGTCAACGTC  180

Query  181   AATCAAGAAAATACACGATCACTCTTCTTTTGGTTCTTCGAAGCCTTGTCTGAATCTCCT  240
             |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct  181   AATCAAGAAAATACACGATCACTCTTCTTTTGGTTCTTCGAAGCATTGTCTGAATCTCCT  240

Query  241   TCAACAAGACCTCTAGTTCTCTGGCTCAACGGAGGTCCTGGATGTTCATCTATTGGATAT  300
             ||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||
Sbjct  241   TCAACAAGACCTCTAGTTCTCTGGCTCAATGGAGGTCCTGGATGTTCATCGATTGGATAT  300

Query  301   GGAGCAGCATCTGAATTAGGACCTTTTCGTGTTGTTGAAAATGGGACAAGCCTTAGTTTC  360
             |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct  301   GGAGCAGCATCTGAATTAGGACCTTTTCGTGTTGTTGAAAATGGGACAAGTCTTAGTTTC  360

Query  361   AATCAATATTCTTGGGTCCAAGAAGCGAATATATTGTTTTTAGAATCACCAGTTGGAGTA  420
             |||||||| ||||||||||||||||||||||| |||||||||||||||||||| ||||||
Sbjct  361   AATCAATACTCTTGGGTCCAAGAAGCGAATATGTTGTTTTTAGAATCACCAGTCGGAGTA  420

Query  421   GGGTTTTCGTACACGAACTCATCTTCCGATTTGGACAACCTCAACGACGCTTTCGTTGCG  480
             ||||||||||||||||||||||| || |||||||| ||||||||||||||||||||||||
Sbjct  421   GGGTTTTCGTACACGAACTCATCATCTGATTTGGAAAACCTCAACGACGCTTTCGTTGCG  480

Query  481   GAAGATGCATACAACTTTATGGTTGCTTGGTTTGCAAGGTATCCCCAATATAAGTCTCGT  540
             ||||||||||||||||| |||||||||||||||||||||||||| || ||||||||||||
Sbjct  481   GAAGATGCATACAACTTCATGGTTGCTTGGTTTGCAAGGTATCCTCAGTATAAGTCTCGT  540

Query  541   GATTTCTTCATAGCTGGTGAAAGCTATGCCGGTCACTACGCACCTCAGCTAGCCGAGCTT  600
             ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct  541   GATTTCTTCATAGCTGGTGAAAGCTATGCCGGTCACTACTCACCTCAGCTAGCCGAGCTT  600

Query  601   ATATACGATCGGAACAAAGTTAAGCCAAAGGACTCCTTCATTAATCTCAAAGGCTTCATC  660
             ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct  601   ATATACGATCGGAACAAAGTTCAGCCAAAGGACTCCTTCATTAATCTCAAAGGCTTCATC  660

Query  661   GTGGGAAATCCGTTGACGGATGATGAATACGATAACAAAGGGATTCTAGAATACGCATGG  720
             ||||||||||| |||||||| ||||| |||||||||||||||||||||||||||||||||
Sbjct  661   GTGGGAAATCCATTGACGGACGATGAGTACGATAACAAAGGGATTCTAGAATACGCATGG  720

Query  721   AGCCATGCAGTGATCTCTGATGATCTCTACGACTCCGCAAAACGTAACTGCGACTTCAAG  780
             ||||||||||||||||||||| |||| |||||||||||||||| ||||||||||||||||
Sbjct  721   AGCCATGCAGTGATCTCTGATCATCTTTACGACTCCGCAAAACATAACTGCGACTTCAAG  780

Query  781   TCTTCGAATTGGTCAGAGCCCTGCAACGTTGCCATGAACACAGTGTTCACAAAATACAAA  840
             |||||||| ||||||||||| ||||||||||| |||||||||||||||||||||||||||
Sbjct  781   TCTTCGAACTGGTCAGAGCCATGCAACGTTGCTATGAACACAGTGTTCACAAAATACAAA  840

Query  841   GAGATTGATATTTATAACATATATGCTCCCAAGTGCATAGCTAATAGCTCATCAGGAGCT  900
             ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct  841   GAGATTGATATTTATAACATATATGCTCCCAAGTGCATATCTAATAGCTCATCAGGAGCT  900

Query  901   TCCTACTTAGATTCCGGAGTCAATCATAAGTCTCCGGCGGTCAAAGACTGGTTCAAGAGA  960
             |||||||||| || |||||||||| |||||||||||||||| ||||||||||||||||||
Sbjct  901   TCCTACTTAGGTTTCGGAGTCAATGATAAGTCTCCGGCGGTTAAAGACTGGTTCAAGAGA  960

Query  961   GTGAGATGGTTTGAAGGATACGATCCTTGTTACTCTAATTACGCTGAAGAATATTTCAAT  1020
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  961   GTGAGATGGTTTGAAGGATACGATCCTTGTTACTCTAATTACGCTGAAGAATATTTCAAT  1020

Query  1021  AGGGTCGATGTTCGATCGTCTCTTCATGCCACTACACGAAATGTAGCAAGATGGAAAGTT  1080
             || ||||||||||||| |||||||||||| |||||||||||||||||||| |||||||||
Sbjct  1021  AGAGTCGATGTTCGATTGTCTCTTCATGCTACTACACGAAATGTAGCAAGGTGGAAAGTT  1080

Query  1081  TGCAATGATTCGATATTGCAAACGTACCATTTTACAGTCTCCTCAATGTTGCCTACATAT  1140
             |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct  1081  TGCAATGATTCGATATTGCAAACGTACCATTTTACAGTCTCCTCAATGTTGCCTACTTAT  1140

Query  1141  AGTAAGCTCATCAAAGCTGGCCTCAAGATATGGGTTTATAGTGGAGATGCCGACGGGAGA  1200
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  1141  AGTAAGCTCATCAAAGCTGGCCTCAAGATATGGGTTTATAGTGGAGATGCCGACGGGAGA  1200

Query  1201  GTCCCAGTTATCGGAAGTCGGTATTGTGTTGAAGCTCTT-GGGCTTTCCGTCAAATCCGA  1259
             ||||| || ||||||||||||||||||||||||||| || ||| ||||||||||||| ||
Sbjct  1201  GTCCCGGTGATCGGAAGTCGGTATTGTGTTGAAGCT-TTAGGGATTTCCGTCAAATCGGA  1259

Query  1260  ATGGCGTTCTTGGTTCCACAATCATCAGGTGGGAGGGAGGATAACAGAGTACGAAGGAGG  1319
              |||||||||||||||||||||||||||||||||||||| ||||| |||||||| |||||
Sbjct  1260  GTGGCGTTCTTGGTTCCACAATCATCAGGTGGGAGGGAGAATAACGGAGTACGAGGGAGG  1319

Query  1320  GTTAACGTTCGTAACGGTGAGAGGAGCTGGACACTTGGTTCCTCTCAATAAACCTGAAGA  1379
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  1320  GTTAACGTTCGTAACGGTGAGAGGAGCTGGACACTTGGTTCCTCTCAATAAACCTGAAGA  1379

Query  1380  AGCTCTCGCGCTTTTCCGGTCCTTCCTTAACGGCCAAGAACTTCCGTCACGGCCCTAG  1437
             ||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||
Sbjct  1380  AGCTCTCGCGCTTTTCCGGTCCTTCCTTAACGGCCAAGAACTTCCGTCAAGCCCCTAG  1437



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 70832968995


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5