BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg479255
Length=3732
Score E
Sequences producing significant alignments: (Bits) Value
AT3G17740.1 | Symbols: | unknown protein; FUNCTIONS IN: molecu... 5611 0.0
AT3G17712.2 | Symbols: | unknown protein; FUNCTIONS IN: molecu... 1916 0.0
> AT3G17740.1 | Symbols: | unknown protein; FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown;
LOCATED IN: cellular_component unknown; EXPRESSED IN: 23
plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: Protein of unknown function DUF1740
(InterPro:IPR013633); BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G17712.1); Has 409 Blast hits
to 335 proteins in 133 species: Archae - 1; Bacteria - 0; Metazoa
- 140; Fungi - 188; Plants - 42; Viruses - 0; Other Eukaryotes
- 38 (source: NCBI BLink). | chr3:6067759-6072839
REVERSE LENGTH=3719
Length=3719
Score = 5611 bits (3038), Expect = 0.0
Identities = 3526/3755 (94%), Gaps = 60/3755 (2%)
Strand=Plus/Plus
Query 1 Gtttt-tttttCCCGGTGGATGTAATGTCGAATACATCAGAGGACGGCGACGGAGCATC- 58
||||| ||||| |||||||||||||||||||||||| |||| ||||||||||||||| |
Sbjct 2 GTTTTGTTTTTTCCGGTGGATGTAATGTCGAATACACCAGAAGACGGCGACGGAGCA-CA 60
Query 59 GGTAACTACAGGCGGCTTGTTCCCCGTCTTCCCTACTTCGGCGAACTCCGTCTCAGCTTT 118
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
Sbjct 61 GGTAACTACAGGCGGCTTGTTCCCCGTCTTCCCTACTTCGGCGAACTCCATCTCAGCTAT 120
Query 119 TTCTG-GTGCTCCTCAATGGCTTCGCAACGCCAGCTTCACGACGGATCTCTCCGTCATCA 177
||| | |||||||||||||||||||||||| |||||||| ||||||||||| |||||||
Sbjct 121 TTC-GAATGCTCCTCAATGGCTTCGCAACGCTAGCTTCACTACGGATCTCTCTGTCATCA 179
Query 178 ACGCTGCCGCTTCGACGGCTCCTTCCTTATCCGAGGTCGAGGCTGGAGACGAAGAAGATG 237
||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||
Sbjct 180 ACGCTGCCGCTTCGACGGCTCCTTCCTCATCCGAGGTCGAGGCTGGAGACGACGAAGATG 239
Query 238 AAAAAGGA-GATGCCGATAGG-AATATTGGTGAAGCTAATCAGCCTAGAGTATACAATTT 295
|| ||||| || || ||| || ||||| ||| |||||||||| |||| || || |||||
Sbjct 240 AAGAAGGAGGA-GCTGAT-GGAAATATCGGTTTAGCTAATCAGGCTAGGGTTTATAATTT 297
Query 296 GGTTGAAGAAGAAGAGTCTTTGGAGTCTGATGGCGACAAGGTAATGAGGAAGCGGGGGAA 355
|||||||||||||| ||||||||||||||||| ||||||||||| ||||||||| | |||
Sbjct 298 GGTTGAAGAAGAAGGGTCTTTGGAGTCTGATGACGACAAGGTAAAGAGGAAGCGAGAGAA 357
Query 356 AAAGAAGAAGCGGAAGAGTGGTAATTCTTCGGATGAATCTCGTTCAAGGAAATCCTCAGT 415
||||||||| |||||||||| |||| |||||||||||||||| | | ||| |
Sbjct 358 AAAGAAGAAACGGAAGAGTGATAATGCTTCGGATGAATCTCG-T--------T-CTC-G- 405
Query 416 TAAGGCATCTGATGAATACTATTCGAAACCTGTGAAGGATTATTATTTGGATACTCGTCC 475
||| ||||||||||||||||||||||||||||||||||||||| ||||| ||||||||
Sbjct 406 TAA---ATCTGATGAATACTATTCGAAACCTGTGAAGGATTATTACTTGGACACTCGTCC 462
Query 476 TGATCCAGATAATCTGGCTTATGGCTCTATTTACAGGATGAATGTTCCTCGTTATAAACT 535
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 463 TGATCCAGATAATCTGGCTTATGGCTCTATTTACAGGATGAATGTTCCTCGTTATAAACT 522
Query 536 TGACAATTCTCAGAGAGTTCCTGGTTCAGGTTCTCTGAGGTATTATTTGCGGAATCGGCG 595
||||||||||||||||||||| || |||||||||||||||| ||||||||||||||| ||
Sbjct 523 TGACAATTCTCAGAGAGTTCCAGGGTCAGGTTCTCTGAGGTTTTATTTGCGGAATCGACG 582
Query 596 TAGTTCTATGCTTGACACAGAGATTGATATTGATTCTTTGGAGGGGAGAGCAAAGTCTGA 655
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 583 TAGTTCTATGCTTGACACAGAGATTGATATTGATTCTTTGGAGGGGAGAGCAAAGTCTGA 642
Query 656 TACCCGATATTGGTATGCAAAACATGCTGCCTTGGAACGCAACAAGAATTTCAAGCGTAT 715
||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 643 TACCCGATACTGGTATGCAAAACATGCTGCCATGGAACGCAACAAGAATTTCAAGCGTAT 702
Query 716 TCGTTTATCTGCTTCAACTGAAGCTGTGGATTCGTCCTTTGATAATTTCATTCCACTGGA 775
||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||||
Sbjct 703 TCGTTTATCTGCTGCAAGTGAAGCTGTGGATTCTTCCTTTGATAATTTCATTCCACTGGA 762
Query 776 GGAAGATGAGACTG-TCCAAGAAAGTGACGAAGAAGATGTTTTATCAAAGGACTCAAAGA 834
|||||| | ||||| ||| |||||||||||||||||||||||||||||||||||||| ||
Sbjct 763 GGAAGACGTGACTGTTCC-AGAAAGTGACGAAGAAGATGTTTTATCAAAGGACTCAATGA 821
Query 835 TGGGAGCATCATGGGAGGATGAAGTGCTGAATAAAACGCGAGAGTTCAACAAAGTGACGA 894
| ||||||||||||||||||||||||||||||||||| || |||||||||| ||||||||
Sbjct 822 TTGGAGCATCATGGGAGGATGAAGTGCTGAATAAAACACGGGAGTTCAACAGAGTGACGA 881
Query 895 GGGAGCGTCCACATGATGAAAAGGCATGGCTGGCATTTGCTGATTTTCAAGACAAGGTTT 954
| || ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 882 GAGAACGTCCCCATGATGCAAAGGCATGGCTGGCATTTGCTGATTTTCAAGACAAGGTTT 941
Query 955 CAAGTATGCAATCTCAGAAAGGAGTTCGCCTGCAGACTTTAGAGAAAAAGATTAGTATAC 1014
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 942 CAAGTATGCAATCTCAGAAAGGAGTTCGCCTGCAGACTTTAGAGAAAAAGATTAGTATAC 1001
Query 1015 TTGAGAAGGCTTTTGAACTGAACCCAGATAGCGAAGAACTGTTGCTTGCTCTGCTCAAGG 1074
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 1002 TTGAGAAGGCTTTTGAGCTGAACCCAGATAGCGAAGAACTGTTGCTTGCTCTGCTCAAGG 1061
Query 1075 CATACCGACGCAGAGACAACGCGGAAGTACTAATCAGTAGGTGGGAAAAGGCACTTATGC 1134
|||||||| ||||||||||||| || ||||||||||||||||||||||||||||||||||
Sbjct 1062 CATACCGAAGCAGAGACAACGCTGATGTACTAATCAGTAGGTGGGAAAAGGCACTTATGC 1121
Query 1135 AAAATTCCGCAAGCTACAAGTTATGGAGAGAGTTTCTATGTGTTGTTCAAGGGGAGTTCT 1194
| ||||||||||||||||| |||||||| |||||| ||||||||||||||||||||||||
Sbjct 1122 AGAATTCCGCAAGCTACAAATTATGGAGGGAGTTTTTATGTGTTGTTCAAGGGGAGTTCT 1181
Query 1195 CCAGATTCAAAGTATCAGAAGTGAGGAAGCTGTATTCTTATGCGATCCAGGCTCTTTCTT 1254
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1182 CCAGATTCAAAGTATCAGAAGTGAGGAGGCTGTATTCTTATGCGATCCAGGCTCTTTCTT 1241
Query 1255 CTGCTTGCAGCAAGCGACATAGGCAGGTGGATACAACATCTGAACCGTTGGATTCTGCTG 1314
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 1242 CTGCTTGCAGCAAGCGACATAGGCAGGTGGATACAACATCTGAACCATTGGATTCTGCTG 1301
Query 1315 CCATCCAGCAGGAACTCGTTCTAGTCGATATGCTTGTTAGCCTCTGCAGGTTTGAGTGGC 1374
||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 1302 CCATCCAACAGGAACTCGTTCTAGTCGATATGCTAGTTAGCCTCTGCAGGTTTGAGTGGC 1361
Query 1375 AGGCTGGTTACCAGGAGCTCGCCACAGCGTTACTTCAAGCTGAAGTGGAATTTAGCATCT 1434
||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||
Sbjct 1362 AGGCTGGTTACCAGGAGCTGGCCACAGCGTTACTTCAAGCCGAAGTGGAATTTAGCATCT 1421
Query 1435 TTTCTCCATCTTTGTTGCTAACTGAACAGAGTAAATTAAGACTGTTTGAGCACTTTTGGA 1494
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 1422 TTTCTCCATCTTTGTTGCTAACTGAACAGAGTAAATTACGACTGTTTGAGCACTTTTGGA 1481
Query 1495 GCAGTAATGGTGCTAGAGTTGGAGAAGAAGGAGCTTTTGGATGGTTATTGTGGCTGGAGA 1554
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1482 GCAGTAATGGTGCTAGAGTTGGAGAAGAAGGAGCTTTTGGATGGTTATTGTGGCTGGAGA 1541
Query 1555 AAGAGGAGGAAAACAGGCAGAAAATTTTGAAAGAAGTATTCTCTGATGACAATGAGGTAG 1614
|||||||||||||||||||||||||||||||||||| || ||||||||||||||| ||||
Sbjct 1542 AAGAGGAGGAAAACAGGCAGAAAATTTTGAAAGAAGAATCCTCTGATGACAATGAAGTAG 1601
Query 1615 GTGGTTGGACAGGTTGGACAGAACAGGTCTCAGGTAGAAATGGAGAT-AT-T-GCTTCAG 1671
||||||||||||||||||||||||||||||||||||||||||||||| || | |||||||
Sbjct 1602 GTGGTTGGACAGGTTGGACAGAACAGGTCTCAGGTAGAAATGGAGATGATATTGCTTCAG 1661
Query 1672 CTAACACTGGAGAGGTCGATGTTGATCGTGA-GAGTCTGGATGAGGAAATGGAAGACGAG 1730
|||||||||||||||||||||||||||| || | ||||||||||||||||||||||||||
Sbjct 1662 CTAACACTGGAGAGGTCGATGTTGATCG-GAAGGGTCTGGATGAGGAAATGGAAGACGAG 1720
Query 1731 AATAGCAAACCGGAAGATGACACTGAAGCTATGCTGAAATTATTGGGCATTGATGTCAAT 1790
||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1721 AATAGCAAACCTGAAGATGACACCGAAGCTATGCTGAAATTATTGGGCATTGATGTCAAT 1780
Query 1791 GCTGCGGCCAGTGATGAGGTTAAAGATACATCAACTTGGGTAAAATGGTTTGAAGAAGAG 1850
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 1781 ACTGCGGCCAGTGATGAGGTTAAAGATACATCAACTTGGGTTAAATGGTTTGAAGAAGAG 1840
Query 1851 GTTTCTCGAGATCACAGTCAATGGATGCCTACTCGGAAAGCTGGTGGAGTCTCCAGTGTT 1910
|||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||
Sbjct 1841 GTTTCTCGAGATCACAGTCAATGGATGCCTACTCGGAAAGCTGGTGAATTCTCCAGTGTT 1900
Query 1911 GATGGAATAGGTGAGGGAGAAGATGAAGAGCAACTCTCAAGTGTTGTACTATATGAAGAT 1970
|| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1901 GAGGGAATGGGTGAGGGAGAAGATGAAGAGCAACTCTCAAGTGTTGTACTATATGAAGAT 1960
Query 1971 ATAAATGGATATCTATTTTCTTTATGTTCAAACGAGGCCCGCTTATCTCTGGTATACCAG 2030
|||||||||||||||||||| ||| ||||||| |||||||||||||||||||||||||||
Sbjct 1961 ATAAATGGATATCTATTTTCCTTACGTTCAAAGGAGGCCCGCTTATCTCTGGTATACCAG 2020
Query 2031 TTCATTGATTTCTTCGGTGCACATATCTCCCCATGGACTTCCAGCAACAGTTTGTCGTGG 2090
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2021 TTCATTGATTTCTTCGGTGCACATATCTCCCCATGGACTTCCAGCAACAGTTTGTCGTGG 2080
Query 2091 AGTGAGAAAATAAGTAGCCTTGAAACATTGTCAGATTCTATGCTAGAAAACTTGAGAAGT 2150
||||||||||||||||||||||||||||| |||||||| ||| |||||||||||||||||
Sbjct 2081 AGTGAGAAAATAAGTAGCCTTGAAACATTTTCAGATTCCATGTTAGAAAACTTGAGAAGT 2140
Query 2151 GTTCATGAATGTCTGTCGAAATCAGATAGTGCCAACTGCTTCAGCTTGGTATCTCTTTTA 2210
|||||||||||| ||||||||||||||||||||||||| |||||||||| ||||||| ||
Sbjct 2141 GTTCATGAATGTTTGTCGAAATCAGATAGTGCCAACTGTTTCAGCTTGGGATCTCTTCTA 2200
Query 2211 GGTGGCAGCTATGACATATCTATGCGGGCTGAGATGATGAAGTTTCTCCGCAATGCCATC 2270
|||||||||| |||| ||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 2201 GGTGGCAGCTGTGACTTATCTATGCGGACTGAGATGATGAAGTTTCTCCGCAATGCCATC 2260
Query 2271 TTGCTTTGTCTAAATGTTTTTCCGCGAAACTACATTCTGGAAGAAGCTGTGCTTGTTGCA 2330
|||||||||||||||||||| |||||||| |||||||| |||||||||||||||||||||
Sbjct 2261 TTGCTTTGTCTAAATGTTTTCCCGCGAAATTACATTCTCGAAGAAGCTGTGCTTGTTGCA 2320
Query 2331 GAAGAGTTATATGTAACAAATATGAAAACATGTGAGGTAGCAACTACGCCATGCCAAGCT 2390
||||| ||| ||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 2321 GAAGAACTATTTGTAACAAATATGAAAACATGTGAGGTAGCAACTATGCCATGCCAAGCT 2380
Query 2391 TTGGCCAAACGTCTCCTGAAAAGTGACCGGCAGGATCTACTACTTTGTGGAGTTTATGCA 2450
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2381 TTGGCCAAACGTCTCCTGAAAAGTGACCGGCAGGATCTACTACTTTGTGGAGTTTATGCA 2440
Query 2451 CAGCGAGAAGCTGCTTCTGGAAATATGAAACATGCAAGACGAGTTTTCGACATGGCACTG 2510
||| |||||||||||||||||||||||||||||||||| ||||| |||||||||||||||
Sbjct 2441 CAGAGAGAAGCTGCTTCTGGAAATATGAAACATGCAAGGCGAGTCTTCGACATGGCACTG 2500
Query 2511 ACTTCTATCTGTGGCCTCCCTCAGGAATTACAGTGTAACGCTCCTTTGCTATGTTTATGG 2570
||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||
Sbjct 2501 ACTTCTATCTGTGGCCTCCCTAAGGAATTACAGTGTAACACTCCTTTGCTATGTTTATGG 2560
Query 2571 TATGCTGAATTGGAAGTAGCCAATAGTAACGGCAGTGGTAGGGATACAGAATCATCATCT 2630
|||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 2561 TATGCTGAATCGGAAGTAGCCAATAGTAGCGGCAGTGGTAGGGATACAGAATCATCATCT 2620
Query 2631 CGTGCCATACATATTCTGTGCTACCTGGGAAGTGGTCTAGCTTATATTCCTTATACTTCC 2690
||||| || ||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 2621 CGTGCTATGCATATTCTGTGCTACCTGGGAAGTGGTCTAGCTTATAGTCCTTATACTTCC 2680
Query 2691 CAGTCTTCAAGTATGCAAATCCTTAGAGCACGCCAAGGGTTCAGAGAGAAGCTTAAGAAG 2750
||||||||||| |||||||| |||||||||||||| ||||||||||||||||||||||||
Sbjct 2681 CAGTCTTCAAGCATGCAAATTCTTAGAGCACGCCAGGGGTTCAGAGAGAAGCTTAAGAAG 2740
Query 2751 ATACAATCAACCTGGTCTCATGGTGTCACAGATGATCAATCAGCAGCGCTTGTTTGTTCG 2810
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2741 ATACAATCAACATGGTCTCATGGTGTCACAGATGATCAATCAGCAGCGCTTGTTTGTTCG 2800
Query 2811 GCAGCTCTATTTGAGGAGTTAACAAATGACCTTCCTGGTGCTGTTGAAATCCTAGAGCAC 2870
|||||||||||||||||||||||||||||||||||||||||| |||| ||| ||||||||
Sbjct 2801 GCAGCTCTATTTGAGGAGTTAACAAATGACCTTCCTGGTGCTCTTGAGATCTTAGAGCAC 2860
Query 2871 ATGTTCAGTTCTGTTCTTCCAGGAAGAAAAAGTCAAAGTCGTCAGCTTGAACTCTTGTTC 2930
|||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||
Sbjct 2861 ATGTTCAGTTCTGTTCTTCCAGGAAGAAAAAGTCAAAGTCATCAACTTGAACTCTTGTTC 2920
Query 2931 AATTATTATGTGAGAATGCTTCAGAGACACCAGGACGATTTAACTTTGTCACAACTTTGG 2990
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 2921 AATTATTATGTGAGAATGCTTCAGAGACACCAGGACGATCTAACTTTGTCACAACTTTGG 2980
Query 2991 AAGCCCATATCAGAGGGACTGCAACTGTATCCTCTCAATCCC-ATGCTTTATCGAGCTTT 3049
||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||
Sbjct 2981 AAGCCCATATCAGAGGGACTGCAACTGTATCCTCTCAATCCTGAA-CTTTATCGAGCTTT 3039
Query 3050 GGTGGACATCTGTAACCACCGTATGACATCCCATAGACTGAGAATGATGTTTGATGACTA 3109
||||||||| ||||| ||||| ||||||||||||| ||||||||||||||| ||||||||
Sbjct 3040 GGTGGACATTTGTAATCACCGGATGACATCCCATAAACTGAGAATGATGTTCGATGACTA 3099
Query 3110 CTCCCGCAAGAATTCATCTGTCGTTGTTTGGCTGTTTGCACTTTGTTATGAGTTGAGTAA 3169
||||||||||||||| ||||||||||||||||| |||||||||| |||||| ||||||||
Sbjct 3100 CTCCCGCAAGAATTCGTCTGTCGTTGTTTGGCTATTTGCACTTTCTTATGAATTGAGTAA 3159
Query 3170 AGGAGGCTCC-CTACACAGAATCCGTGGATTGTTTGAAAGGGCATTGGCCCAAGATACAC 3228
||||||||| | |||||||||||| ||||||||||||||||||||||| ||||||||||
Sbjct 3160 AGGAGGCTCATC-ACACAGAATCCGCGGATTGTTTGAAAGGGCATTGGCACAAGATACAC 3218
Query 3229 AAAACAACTCGGTTATTCTATGGCGTTGCTACATTGCATATGAGATCGACATCGCGCACA 3288
|||||||||| ||||||||||||||||||||||| ||||||||||||||||||||| |||
Sbjct 3219 AAAACAACTCAGTTATTCTATGGCGTTGCTACATAGCATATGAGATCGACATCGCGGACA 3278
Query 3289 ATCCATCAGCAGCTAGAAGGATTTACTTCCGAGCTATAAATGCATGCCCATGGTCaaaaa 3348
||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || |
Sbjct 3279 ATCCATCAGCAGCTAGAAGGATTTATTTCCGAGCTATAAATGCATGCCCATGGTCGAAGA 3338
Query 3349 aaCTATGGCTGGATGGGTATGGGAAGCTGAGCTCAGTCCTGACGGCAAAGGAGTTGTCAG 3408
|||||||||| ||||||| |||||||||| | |||||| |||||||||| ||| ||||||
Sbjct 3339 AACTATGGCTCGATGGGTTTGGGAAGCTGGGATCAGTCTTGACGGCAAAAGAGATGTCAG 3398
Query 3409 ATTTACAAGAAGTGATGCGGGACAAGGAACTGAACATTAGGACAGATATCTACGAGATTC 3468
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3399 ATTTACAAGAAGTGATGCGGGACAAGGAACTGAACATTAGGACAGATATCTACGAGATTC 3458
Query 3469 TTCTTATGCAGGGATGAGATCATTGA-GATGt-atattatcaaatattgtatagttatga 3526
| |||||||||||||||||||||| | | ||| | | || |||||||||| | || || |
Sbjct 3459 TGCTTATGCAGGGATGAGATCATTTAAG-TGTCA-ACTAACAAATATTGT-T-GTAAT-A 3513
Query 3527 tataa--gat-attttatatatttgtattCA--TCTA-GTTTAGTTTGCG-ATTTATGAG 3579
| || | | ||||| |||| | || || | || ||| | ||| | |||||||||
Sbjct 3514 TGGAAACG-TGATTTTCTATAAATA-AT-CAAGTATAAGTTCA-TTTAAGTATTTATGAG 3569
Query 3580 TGTGCGTCTCACTCGTTTAAGTTCATTGATTCCCTGGA-TTGGCCAATGCTGGCAGGTTT 3638
||||||||||||||| | ||||||||||| |||| | |||||||||| ||||||||||
Sbjct 3570 TGTGCGTCTCACTCGAT-AAGTTCATTGACTCCCCAAAATTGGCCAATGTTGGCAGGTTT 3628
Query 3639 AGGTGAATATGTTTCCTTGAACGGAAATTTGTATTGGACTTCTTACAATAAAGAGACTCG 3698
| |||||||||||||||||||||||||||||||||||||| ||||||| ||||||||
Sbjct 3629 AAGTGAATATGTTTCCTTGAACGGAAATTTGTATTGGACTGCTTACAA----GAGACTCG 3684
Query 3699 TGAGTGTTTT-CTCGGAAGCTTTGATTTCTCCACG 3732
||||| |||| |||||||||||||||| |||||||
Sbjct 3685 TGAGTATTTTTCTCGGAAGCTTTGATTCCTCCACG 3719
> AT3G17712.2 | Symbols: | unknown protein; FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown;
LOCATED IN: cellular_component unknown; CONTAINS InterPro
DOMAIN/s: Protein of unknown function DUF1740 (InterPro:IPR013633);
BEST Arabidopsis thaliana protein match is: unknown
protein (TAIR:AT3G17740.1). | chr3:6056870-6060287 FORWARD
LENGTH=2653
Length=2653
Score = 1916 bits (1037), Expect = 0.0
Identities = 1145/1197 (96%), Gaps = 8/1197 (1%)
Strand=Plus/Plus
Query 1186 GGGAGTTCTCCAGATTCAAAGTATCAGAAGTGAGGAAGCTGTATTCTTATGCGATCCAGG 1245
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1186 GGGAGTTCTCCAGATTCAAAGTATCAGAAGTGAGGAGGCTGTATTCTTATGCGATCCAGG 1245
Query 1246 CTCTTTCTTCTGCTTGCAGCAAGCGACATAGGCAGGTGGATACAACATCTGAACCGTTGG 1305
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1246 CTCTTTCTTCTGCTTGCAGCAAGCGACATAGGCAGGTGGATACAACATCTGAACCATTGG 1305
Query 1306 ATTCTGCTGCCATCCAGCAGGAACTCGTTCTAGTCGATATGCTTGTTAGCCTCTGCAGGT 1365
|||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||
Sbjct 1306 ATTCTGCTGCCATCCAACAGGAACTCGTTCTAGTCGATATGCTAGTTAGCCTCTGCAGGT 1365
Query 1366 TTGAGTGGCAGGCTGGTTACCAGGAGCTCGCCACAGCGTTACTTCAAGCTGAAGTGGAAT 1425
|||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||
Sbjct 1366 TTGAGTGGCAGGCTGGTTACCAGGAGCTGGCCACAGCGTTACTTCAAGCCGAAGTGGAAT 1425
Query 1426 TTAGCATCTTTTCTCCATCTTTGTTGCTAACTGAACAGAGTAAATTAAGACTGTTTGAGC 1485
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1426 TTAGCATCTTTTCTCCATCTTTGTTGCTAACTGAACAGAGTAAATTACGACTGTTTGAGC 1485
Query 1486 ACTTTTGGAGCAGTAATGGTGCTAGAGTTGGAGAAGAAGGAGCTTTTGGATGGTTATTGT 1545
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1486 ACTTTTGGAGCAGTAATGGTGCTAGAGTTGGAGAAGAAGGAGCTTTTGGATGGCTATTGT 1545
Query 1546 GGCTGGAGAAAGAGGAGGAAAACAGGCAGAAAATTTTGAAAGAAGTATTCTCTGATGACA 1605
||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||
Sbjct 1546 GGCTGGAGAAAGAGGAGGAAAACAGGCAGAAAATTTTGAAAGAAGAATCCTCTGATGACA 1605
Query 1606 ATGAGGTAGGTGGTTGGACAGGTTGGACAGAACAGGTCTCAGGTAGAAATGGAGAT-AT- 1663
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1606 ATGAAGTAGGTGGTTGGACAGGTTGGACAGAACAGGTCTCAGGTAGAAATGGAGATGATC 1665
Query 1664 T-GCTTCAGCTAACACTGGAGAGGTCGATGTTGATCGTGA-GAGTCTGGATGAGGAAATG 1721
| ||||||||||||||||||||||||||||||||||| || | |||||||||||||||||
Sbjct 1666 TTGCTTCAGCTAACACTGGAGAGGTCGATGTTGATCG-GAAGGGTCTGGATGAGGAAATG 1724
Query 1722 GAAGACGAGAATAGCAAACCGGAAGATGACACTGAAGCTATGCTGAAATTATTGGGCATT 1781
|||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||
Sbjct 1725 GAAGACGAGAATAGCAAACCTGAAGATGACACCGAAGCTATGCTGAAATTATTGGGCATT 1784
Query 1782 GATGTCAATGCTGCGGCCAGTGATGAGGTTAAAGATACATCAACTTGGGTAAAATGGTTT 1841
||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 1785 GATGTCAATACTGCGGCCAGTGATGAGGTTAAAGATACATCAACTTGGGTTGAATGGTTT 1844
Query 1842 GAAGAAGAGGTTTCTCGAGATCACAGTCAATGGATGCCTACTCGGAAAGCTGGTGGAGTC 1901
||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||
Sbjct 1845 GAAGAAGAGGTTTCTCGAGATCACAGTCAATGGATGCCTACTCGGAAAGCTGGTGAATTC 1904
Query 1902 TCCAGTGTTGATGGAATAGGTGAGGGAGAAGATGAAGAGCAACTCTCAAGTGTTGTACTA 1961
||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1905 TCCAGTGTTGAGGGAATGGGTGAGGGAGAAGATGAAGAGCAACTCTCAAGTGTTGTACTA 1964
Query 1962 TATGAAGATATAAATGGATATCTATTTTCTTTATGTTCAAACGAGGCCCGCTTATCTCTG 2021
||||||||||||||||||||||||||||| ||| ||||||| ||||||||||||||||||
Sbjct 1965 TATGAAGATATAAATGGATATCTATTTTCCTTACGTTCAAAGGAGGCCCGCTTATCTCTG 2024
Query 2022 GTATACCAGTTCATTGATTTCTTCGGTGCACATATCTCCCC-ATGGACTTCCAGCAACAG 2080
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 2025 GTATACCAGTTCATTGATTTCTTCGGTGCACATATCTCCCCCATGGACTTCCAGCAACAG 2084
Query 2081 TTTGTCGTGGAGTGAGAAAATAAGTAGCCTTGAAACATTGTCAGATTCTATGCTAGAAAA 2140
|| ||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||
Sbjct 2085 TT-GTCGTGGAGTGAGAAAATAAGTAGCCTTGAAACATTGTCAGATTCCATGTTAGAAAA 2143
Query 2141 CTTGAGAAGTGTTCATGAATGTCTGTCGAAATCAGATAGTGCCAACTGCTTCAGCTTGGT 2200
|||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||
Sbjct 2144 CTTGAGAAGTGTTCATGAATGTTTGTCGAAATCAGATAGTGCCAACTGTTTCAGCTTGGG 2203
Query 2201 ATCTCTTTTAGGTGGCAGCTATGACATATCTATGCGGGCTGAGATGATGAAGTTTCTCCG 2260
||||||| |||||||||||| |||| ||||||||||| ||||||||||||||||||||||
Sbjct 2204 ATCTCTTCTAGGTGGCAGCTGTGACTTATCTATGCGGACTGAGATGATGAAGTTTCTCCG 2263
Query 2261 CAATGCCATCTTGCTTTGTCTAAATGTTTTTCCGCGAAACTACATTCTGGAAGAAGCTGT 2320
|||||||||||||||||||||||||||||| |||| ||| ||||||| |||||||||||
Sbjct 2264 CAATGCCATCTTGCTTTGTCTAAATGTTTTCCCGCAAAATTACATTCCCGAAGAAGCTGT 2323
Query 2321 GCTTGTTGCAGAAGAGTTATATGTAACAAATATGAAAACATGTGAGGTAGCAACTAC 2377
||||||| ||||||| ||| |||||||||||||||||||||||||| | | |||||
Sbjct 2324 GCTTGTTACAGAAGAACTATTTGTAACAAATATGAAAACATGTGAGG-ATCTACTAC 2379
Score = 1596 bits (864), Expect = 0.0
Identities = 1037/1117 (93%), Gaps = 26/1117 (2%)
Strand=Plus/Plus
Query 1 Gtttt-tttttCCCGGTGGATGTAATGTCGAATACATCAGAGGACGGCGACGGAGCATC- 58
||||| ||||| |||||||||||||||||||||||| |||| ||||||||||||||| |
Sbjct 90 GTTTTGTTTTTTCCGGTGGATGTAATGTCGAATACACCAGAAGACGGCGACGGAGCA-CA 148
Query 59 GGTAACTACAGGCGGCTTGTTCCCCGTCTTCCCTACTTCGGCGAACTCCGTCTCAGCTTT 118
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
Sbjct 149 GGTAACTACAGGCGGCTTGTTCCCCGTCTTCCCTACTTCGGCGAACTCCATCTCAGCTAT 208
Query 119 TTCTG-GTGCTCCTCAATGGCTTCGCAACGCCAGCTTCACGACGGATCTCTCCGTCATCA 177
||| | |||||||||||||||||||||||| |||||||| ||||||||||| |||||||
Sbjct 209 TTC-GAATGCTCCTCAATGGCTTCGCAACGCTAGCTTCACTACGGATCTCTCTGTCATCA 267
Query 178 ACGCTGCCGCTTCGACGGCTCCTTCCTTATCCGAGGTCGAGGCTGGAGACGAAGAAGATG 237
||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||
Sbjct 268 ACGCTGCCGCTTCGACGGCTCCTTCCTCATCCGAGGTCGAGGCTGGAGACGACGAAGATG 327
Query 238 AAAAAGGA-GATGCCGATAGG-AATATTGGTGAAGCTAATCAGCCTAGAGTATACAATTT 295
|| ||||| || || ||| || ||||| ||| |||||||||| |||| || || |||||
Sbjct 328 AAGAAGGAGGA-GCTGAT-GGAAATATCGGTTTAGCTAATCAGGCTAGGGTTTATAATTT 385
Query 296 GGTTGAAGAAGAAGAGTCTTTGGAGTCTGATGGCGACAAGGTAATGAGGAAGCGGGGGAA 355
|||||||||||||| ||||||||||||||||| ||||||||||| ||||||||| | |||
Sbjct 386 GGTTGAAGAAGAAGGGTCTTTGGAGTCTGATGACGACAAGGTAAAGAGGAAGCGAGAGAA 445
Query 356 AAAGAAGAAGCGGAAGAGTGGTAATTCTTCGGATGAATCTCGTTCAAGGAAATCCTCAGT 415
||||||||| |||||||||| |||| |||||||||||||||| | | ||| |
Sbjct 446 AAAGAAGAAACGGAAGAGTGATAATGCTTCGGATGAATCTCG-T--------T-CTC-G- 493
Query 416 TAAGGCATCTGATGAATACTATTCGAAACCTGTGAAGGATTATTATTTGGATACTCGTCC 475
||| ||||||||||||||||||||||||||||||||||||||| ||||| ||||||||
Sbjct 494 TAA---ATCTGATGAATACTATTCGAAACCTGTGAAGGATTATTACTTGGACACTCGTCC 550
Query 476 TGATCCAGATAATCTGGCTTATGGCTCTATTTACAGGATGAATGTTCCTCGTTATAAACT 535
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 551 TGATCCAGATAATCTGGCTTATGGCTCTATTTACAGGATGAATGTTCCTCGTTATAAACT 610
Query 536 TGACAATTCTCAGAGAGTTCCTGGTTCAGGTTCTCTGAGGTATTATTTGCGGAATCGGCG 595
||||||||||||||||||||| || |||||||||||||||| ||||||||||||||| ||
Sbjct 611 TGACAATTCTCAGAGAGTTCCAGGGTCAGGTTCTCTGAGGTTTTATTTGCGGAATCGACG 670
Query 596 TAGTTCTATGCTTGACACAGAGATTGATATTGATTCTTTGGAGGGGAGAGCAAAGTCTGA 655
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 671 TAGTTCTATGCTTGACACAGAGATTGATATTGATTCTTTGGAGGGGAGAGCAAAGTCTGA 730
Query 656 TACCCGATATTGGTATGCAAAACATGCTGCCTTGGAACGCAACAAGAATTTCAAGCGTAT 715
||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 731 TACCCGATACTGGTATGCAAAACATGCTGCCATGGAACGCAACAAGAATTTCAAGCGTAT 790
Query 716 TCGTTTATCTGCTTCAACTGAAGCTGTGGATTCGTCCTTTGATAATTTCATTCCACTGGA 775
||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||||
Sbjct 791 TCGTTTATCTGCTGCAAGTGAAGCTGTGGATTCTTCCTTTGATAATTTCATTCCACTGGA 850
Query 776 GGAAGATGAGACTG-TCCAAGAAAGTGACGAAGAAGATGTTTTATCAAAGGACTCAAAGA 834
|||||| | ||||| ||| |||||||||||||||||||||||||||||||||||||| ||
Sbjct 851 GGAAGACGTGACTGTTCC-AGAAAGTGACGAAGAAGATGTTTTATCAAAGGACTCAATGA 909
Query 835 TGGGAGCATCATGGGAGGATGAAGTGCTGAATAAAACGCGAGAGTTCAACAAAGTGACGA 894
| ||||||||||||||||||||||||||||||||||| || |||||||||| ||||||||
Sbjct 910 TTGGAGCATCATGGGAGGATGAAGTGCTGAATAAAACACGGGAGTTCAACAGAGTGACGA 969
Query 895 GGGAGCGTCCACATGATGAAAAGGCATGGCTGGCATTTGCTGATTTTCAAGACAAGGTTT 954
| || ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 970 GAGAACGTCCCCATGATGCAAAGGCATGGCTGGCATTTGCTGATTTTCAAGACAAGGTTT 1029
Query 955 CAAGTATGCAATCTCAGAAAGGAGTTCGCCTGCAGACTTTAGAGAAAAAGATTAGTATAC 1014
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1030 CAAGTATGCAATCTCAGAAAGGAGTTCGCCTGCAGACTTTAGAGAAAAAGATTAGTATAC 1089
Query 1015 TTGAGAAGGCTTTTGAACTGAACCCAGATAGCGAAGAACTGTTGCTTGCTCTGCTCAAGG 1074
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 1090 TTGAGAAGGCTTTTGAGCTGAACCCAGATAGCGAAGAACTGTTGCTTGCTCTGCTCAAGG 1149
Query 1075 CATACCGACGCAGAGACAACGCGGAAGTACTAATCAG 1111
|||||||| ||||||||||||| || |||||||||||
Sbjct 1150 CATACCGAAGCAGAGACAACGCTGATGTACTAATCAG 1186
Score = 195 bits (105), Expect = 4e-48
Identities = 111/114 (97%), Gaps = 0/114 (0%)
Strand=Plus/Plus
Query 2422 AGGATCTACTACTTTGTGGAGTTTATGCACAGCGAGAAGCTGCTTCTGGAAATATGAAAC 2481
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 2368 AGGATCTACTACTTTGTGGAGTTTATGCACAGCGAGAAGCTGCCTCTGGAAATATGAAAC 2427
Query 2482 ATGCAAGACGAGTTTTCGACATGGCACTGACTTCTATCTGTGGCCTCCCTCAGG 2535
||||||||||||| |||||||||||||||||||||||||||||||||||| |||
Sbjct 2428 ATGCAAGACGAGTATTCGACATGGCACTGACTTCTATCTGTGGCCTCCCTAAGG 2481
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 185868523815
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5