BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg479258
Length=1263
Score E
Sequences producing significant alignments: (Bits) Value
AT3G19470.1 | Symbols: | F-box and associated interaction doma... 1273 0.0
AT3G25225.1 | Symbols: | pseudogene, hypothetical protein | ch... 1186 0.0
AT3G22770.1 | Symbols: | F-box associated ubiquitination effec... 1153 0.0
AT3G24580.1 | Symbols: | F-box and associated interaction doma... 481 8e-135
AT5G28527.1 | Symbols: | pseudogene, hypothetical protein | ch... 329 3e-89
AT3G23420.1 | Symbols: | F-box and associated interaction doma... 268 7e-71
AT4G17200.1 | Symbols: | F-box and associated interaction doma... 102 8e-21
AT5G36730.1 | Symbols: | F-box and associated interaction doma... 100 3e-20
AT5G36820.1 | Symbols: | F-box and associated interaction doma... 100 3e-20
AT3G49510.1 | Symbols: | F-box family protein | chr3:18353842-... 76.8 5e-13
AT3G04250.1 | Symbols: | F-box associated ubiquitination effec... 73.1 6e-12
AT5G60560.1 | Symbols: | F-box and associated interaction doma... 67.6 3e-10
AT3G25090.1 | Symbols: | F-box associated ubiquitination effec... 67.6 3e-10
AT3G18330.1 | Symbols: | F-box family protein | chr3:6291127-6... 63.9 4e-09
AT3G23680.1 | Symbols: | F-box associated ubiquitination effec... 60.2 5e-08
> AT3G19470.1 | Symbols: | F-box and associated interaction domains-containing
protein | chr3:6749524-6751014 FORWARD LENGTH=1388
Length=1388
Score = 1273 bits (689), Expect = 0.0
Identities = 874/961 (91%), Gaps = 21/961 (2%)
Strand=Plus/Plus
Query 313 ATCATCATGTATAAAACGCGAAGCTAAACTTATTGGCTTAGGCGATGATGAA-CTTGATA 371
|||||||||||||||||| ||||||||||||||| ||||||||||||| ||| | |||||
Sbjct 406 ATCATCATGTATAAAACGTGAAGCTAAACTTATTAGCTTAGGCGATGAAGAAGC-TGATA 464
Query 372 TATCTCAAGTCTTTCACTGCGACGGTTTATTGTTATGCATCAGCATCACCAAAGACAAGA 431
||||||||||||||||||| |||||||||||||||||||||||||||||| || |||||
Sbjct 465 TATCTCAAGTCTTTCACTGTGACGGTTTATTGTTATGCATCAGCATCACCGAATCCAAGA 524
Query 432 CTAGGCTCGTGGTTTGGAACCCCTATTGGGGGCATACCC-GTCCAATCGAGCCCACACAT 490
|||||||||| ||||||||||| |||||||||||||||| || | ||||||||||||||
Sbjct 525 CTAGGCTCGTTGTTTGGAACCCGTATTGGGGGCATACCCGGT-TATTCGAGCCCACACAT 583
Query 491 CAATTCAACAAACTCGATAGCTATTCGTATGCTCTCGGATACGACAAGAGCAGCAAATCC 550
|||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 584 CAATTCAACAAATTCGATAGCTATTCGTATGCTCTCGGATACGACAAGAGCCGCAAATCC 643
Query 551 CACAAAATCTTGAGGGGTATTACTTGTTTGAAGCCCTTCAAAATCTACGATTTTAACTCT 610
|||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||
Sbjct 644 CACAAAATCTTGAGGGGTATTACTTGTTTGGATCCCTTCAAAATCTACGATTTTAACTCT 703
Query 611 GA-TTCATGGAGGGTTCTTGATGTCACTCCAGACTGGCACTTAAGGAC-TATTCACCATG 668
|| || |||||||| ||||||||| ||||| || ||||||||| || | || | |||||
Sbjct 704 GACTT-ATGGAGGGATCTTGATGTAACTCCGGAGTGGCACTTATGG-CAAATGCTCCATG 761
Query 669 GCGTGTCTCTCAAGGGAAATGCGTACTGGTTTGCTGA-AGAGAAGTATTCCGAAACCA-G 726
|||||||||||||||||||||| |||||||||||| | |||||| ||| ||||||| | |
Sbjct 762 GCGTGTCTCTCAAGGGAAATGCCTACTGGTTTGCT-AGAGAGAATTATACCGAAACAATG 820
Query 727 AGAAATAGACGATTTTTTCTTAGTCTGTTTTGATTTCACAAGAGAGACATTTGGGCCGCC 786
|| | |||| ||||||||||| ||||||||||||||||||| |||||||||||||||||
Sbjct 821 -GACACAGACCATTTTTTCTTACTCTGTTTTGATTTCACAAGCGAGACATTTGGGCCGCC 879
Query 787 TTTGCCTCTTCCGTTTGAGTTTGCTGTTTCTGAAGATGCTATGAGTGTATCTAGTGTTAG 846
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 880 TTTGCCTCTTCCGTTTGAGTTTGCTGTTTCTGAAGATACTATGAGTGTATCTAGTGTTAG 939
Query 847 AGAAGAGCAGCTTGCTGTTTTATATCAGCCGTGGGATACATTAA-AGATGGAGATCTGGG 905
|||||||||||||| ||| |||||||||||||||||| ||| | || |||| |||||||
Sbjct 940 AGAAGAGCAGCTTGTTGTATTATATCAGCCGTGGGATT-ATTTACAGTTGGACATCTGGG 998
Query 906 TTACGTCTAAGATTGAGCCCAACGCGGTCTCCTGGAACAGCAAGGTGTTCTTATCAGTGA 965
| ||||||||||||||||||||||| || || ||||||||||||||||||||||||||||
Sbjct 999 TGACGTCTAAGATTGAGCCCAACGCTGTGTCGTGGAACAGCAAGGTGTTCTTATCAGTGA 1058
Query 966 GTTTAAAACAACTCATTGGCCCTCAGTTTCATTTTTA-TTTGGGGAGTTTCTTCATTGAC 1024
|||||||||||||| | ||||||||||||| || | ||| |||||||||||||| |||
Sbjct 1059 GTTTAAAACAACTCGTCAGCCCTCAGTTTCAGTTA-ACTTTTGGGAGTTTCTTCATCGAC 1117
Query 1025 GAGGAGAAGAAAGTCGCTGTGGTTTTTGATAAAGACTACAA-AGATAAGCGCAACATGGC 1083
||||||||||||||||||||||||||||||||||||||| | | ||||||||||||| ||
Sbjct 1118 GAGGAGAAGAAAGTCGCTGTGGTTTTTGATAAAGACTACGATA-ATAAGCGCAACATAGC 1176
Query 1084 TTACATCATTGGAGTGGATGGATCCTTTAAAGAAGTGGATCTTGGAGAATCAGAC-GTAA 1142
||||||| |||||||||||||||||||||||| ||| ||||| ||||| |||||| | ||
Sbjct 1177 TTACATCTTTGGAGTGGATGGATCCTTTAAAGCAGTTGATCTCGGAGATTCAGACCGAAA 1236
Query 1143 GGTGTTACCCACTCGTGTGCTCTTATGTTCCAAGTCTAGTGAAACTTAATTAGTCGACCA 1202
| |||| ||||| ||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 1237 G-TGTTTTCCACTTGTGTGCTCTTATGTTCCAAGTCTAGTGCAACTTAATTAGTCGACCA 1295
Query 1203 TCTATTTCTTGCTTGtttttttttCTTTCTCTTTTGTCATCTTCTTTGAACAAGATCATT 1262
|||||| ||||||| ||||||| ||| ||||||||||||||||||||||||||||||||
Sbjct 1296 TCTATTCCTTGCTTACTTTTTTT-CTTCCTCTTTTGTCATCTTCTTTGAACAAGATCATT 1354
Query 1263 A 1263
|
Sbjct 1355 A 1355
Score = 475 bits (257), Expect = 4e-133
Identities = 290/305 (95%), Gaps = 6/305 (2%)
Strand=Plus/Plus
Query 22 TATATATCGAGAGGCCGAAGAAATCGGTAATCACAGAGAGAGGAAAAATAAGAAGAAGAT 81
||||||||||||||||||||||||| ||||||||||| |||||||||||||||| |||||
Sbjct 82 TATATATCGAGAGGCCGAAGAAATCTGTAATCACAGACAGAGGAAAAATAAGAATAAGAT 141
Query 82 GTCCAATCTTCCAAGAGATTTGTCGGAGGAGGTGCTCTGTAGAATTCCGTTGACATCTCT 141
|| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 142 GTACAATCTTCCAAGAGATTTGCCGGAGGAGGTGCTCTGTAGAATTCCGTTGACATCTCT 201
Query 142 GAGGCCTGTCCGATCTACTTGCAAAAAGTGGAGCACTTTATCCAAATGTGGGAGCTTTGC 201
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 202 GAGGCCTGTCCGATCTACTTGCAAAAAGTGGAGCACTTTATCCAAATGTGGGAGCTTTGC 261
Query 202 AAAGAAGCACCTTGCTCAAGCAAAAGTA---GCAGAAGCAAAGGAGTTCATGGTGGTCAT 258
|||||||||||||||||||||||||||| ||||| ||||||||||| ||||||||| |
Sbjct 262 AAAGAAGCACCTTGCTCAAGCAAAAGTACTAGCAGACGCAAAGGAGTTTATGGTGGTCTT 321
Query 259 GATGAAGAATTTTAGGGTTTATTTGATGAGAGTCAATCTTCAAAACA-CG--GTTGAATC 315
||||| ||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct 322 GATGATGAATTTTAGGGTTTATTTGATGAGAGTCAATCTTCAAAACAACGTTGTTGAATC 381
Query 316 ATCAT 320
|||||
Sbjct 382 ATCAT 386
> AT3G25225.1 | Symbols: | pseudogene, hypothetical protein |
chr3:9184970-9186171 FORWARD LENGTH=1202
Length=1202
Score = 1186 bits (642), Expect = 0.0
Identities = 991/1148 (86%), Gaps = 69/1148 (6%)
Strand=Plus/Plus
Query 77 AAGATGTCCAATCTTCCAAGAGATTTGTCGGAGGAGGTGCTCTGTAGAATTCCGTTGACA 136
||||| |||||||||||||| |||||| |||| ||||||||||||||||||||||||||
Sbjct 48 AAGATATCCAATCTTCCAAGGGATTTGGCGGAAGAGGTGCTCTGTAGAATTCCGTTGACG 107
Query 137 TCTCTGAGGCCTGTCCGATCTACTTGCAAAAAGTGGAGCACTTTATCCAAATGTGGGAGC 196
|||||||| |||| ||||| ||||||||| ||||| ||| |||||||||| || ||||
Sbjct 108 TCTCTGAGAACTGTTTGATCTTCTTGCAAAACGTGGAACACGTTATCCAAATATGAGAGC 167
Query 197 TTTGCAAAGAAGCACC-T--TGCTCAAGCAAAAGTAGCAG--AAGCAAAG-GAGTTCATG 250
|||||||||||| ||| | || |||||||||| |||| | ||| |||| ||||| |||
Sbjct 168 TTTGCAAAGAAGTACCTTGGTGATCAAGCAAAATTAGCTGCAAAGGAAAGAGAGTTTATG 227
Query 251 GTGGTCATGATGAAGAATTTTAGGGTTTATTTGATGAGAGTCAATCTTCAAAACACGGTT 310
||||| |||||| ||||||||||||||| ||||||||||||||||||||||||| ||||
Sbjct 228 ATGGTCGTGATGATGAATTTTAGGGTTTAATTGATGAGAGTCAATCTTCAAAACAAGGTT 287
Query 311 GAATCATCATGTATAAAACGCGAAGCTAAACTTATTGGCTTAGGCGATGATGAACTTGAT 370
|||||||||||||||||||| ||||||||||||||| | |||||| |||||| |||||
Sbjct 288 GAATCATCATGTATAAAACGTGAAGCTAAACTTATTAGTTTAGGC---GATGAAGTTGAT 344
Query 371 ATATCTCAAGTCTTTCACTGCGACGGTTTATTGTTATGCATCAGCATCACCAAAGACAAG 430
||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||
Sbjct 345 ATATCTCAAGTCTTTCACTGCAACGGTTTATTGTTATTCATCAGCATCACCAAAGACAAG 404
Query 431 ACTAGGCTCGTGGTTTGGAACCC--CT-ATTGGGGGCATACCCGTCCAATCGAGCCCACA 487
|||||||| |||||||||||||| | ||||||| ||||||||| | ||||| ||||||
Sbjct 405 ACTAGGCTAGTGGTTTGGAACCCGTATGATTGGGGACATACCCGTACGATCGAACCCACA 464
Query 488 CATCAA-TTCAACAAACTCGATA-G-CT-AT-T-CGTATGCTCTCGGATACGACAAGAGC 541
||| || | | ||| | || ||| | | || | |||||||||||||||| ||||||||
Sbjct 465 CAT-AACTGCCACATATTCAATAGGTATAATATATGTATGCTCTCGGATACAACAAGAGC 523
Query 542 -AGCA---AATCCCACAAAATCTTGAGG---GGTA-TTACT---T----GTT-T-GAAGC 584
|||| |||||||||||||||||||| | || ||||| | ||| | || |
Sbjct 524 TAGCAGCTAATCCCACAAAATCTTGAGGTTTGTTACTTACTGGATGAGGGTTATGGATG- 582
Query 585 CCTTCAAAATCTACGATTTTAACTCTGATTCATGGAGGGTTCTTGATGTCACTCCAGACT 644
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 583 AGTTCATAATCTACGATTTTAACTCTGATTCATGGAGGGTTCTTGATGTCACTCCAGATT 642
Query 645 GGCAC-TTAAG-GACTATTCACCATGGCGTGTCTCTCAAGGGAAATGCGTACTGGTTTGC 702
|| || |||| | ||| ||| |||||||||||||||||||||||| |||||||||||
Sbjct 643 GG-ACGATAAGTTA-TATGAACCTTGGCGTGTCTCTCAAGGGAAATGCATACTGGTTTGC 700
Query 703 TGA-AGAGAAG-TATTCCGAAACCAGAGAAATAGACGATTTTTTCTTAGTCTGTTTTGAT 760
| | ||| || |||||||||| | |||||||| |||||||||||||||||||
Sbjct 701 T-ACTGAG-AGATATTCCGAAA-C--------AGACGATTATTTCTTAGTCTGTTTTGAT 749
Query 761 TTCACAAGAGAGACATTTGGGCCGCCTTTGCCTCTTCCGTTTGAGTTTGCTGTTTCTGAA 820
||||||||||||||||||||||| | |||| |||||||||||| ||||| | ||||||
Sbjct 750 TTCACAAGAGAGACATTTGGGCCTCTTTTGACTCTTCCGTTTGTGTTTGTTAAATCTGAA 809
Query 821 GATGCTATGAGTGTATCTAGTGTTAGAGAAGAGCAGCTTGCTGTTTTATATCAGCCGTGG 880
|||| |||| ||||||||| ||||||||||||||||||||| ||||||||||||||||||
Sbjct 810 GATGTTATGTGTGTATCTAATGTTAGAGAAGAGCAGCTTGCGGTTTTATATCAGCCGTGG 869
Query 881 GATACATTAAAGATGGAGATCTGGGTTACGTCTAAGATTGAGCCCAACGCGGTCTCCTGG 940
|||| || |||||||||||||||| ||||||||| |||||||||||||||||| || |||
Sbjct 870 GATAAATAAAAGATGGAGATCTGGATTACGTCTACGATTGAGCCCAACGCGGTGTCGTGG 929
Query 941 AACAGCAAGGTGTTCTTATCAGTGAGTTTAA-AACAACTCATTGGCCCTCAGTTTCATTT 999
||||||||||||||||||||||||||| ||| || ||||||||||||||| |||||| ||
Sbjct 930 AACAGCAAGGTGTTCTTATCAGTGAGTATAAGAA-AACTCATTGGCCCTCCGTTTCAGTT 988
Query 1000 TTATTTGGGGAGTTTCTTCATTGACGAGGAGAAGAAAGTCGCTGTGGTTTTTGATAAAGA 1059
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 989 TTGTTTGGGGAGTTTCTTCATTGACGAGGAGAAGAAAGTCGCTGTGGTTTTTGATAAAGA 1048
Query 1060 CTACAAAGATAAGCGCAACATGGCTTACATCATTGGAG--T--GGA-T-G--G-ATCCTT 1110
||||||||||||||||||||| |||||||||||||||| | ||| | | | ||||||
Sbjct 1049 CTACAAAGATAAGCGCAACATAGCTTACATCATTGGAGACTTTGGAGTCGATGGATCCTT 1108
Query 1111 TAAAGAAGTGGATCTTGGAGAATCAG---ACGTAAGGTGTTACCCACTCGTGTGCTCTTA 1167
|||||||| |||||| |||||||||| ||| || |||||||||||| ||||||||||
Sbjct 1109 TAAAGAAG-GGATCTCGGAGAATCAGCCTACGCAATGTGTTACCCACTTATGTGCTCTTA 1167
Query 1168 TGTTCCAA 1175
||||||||
Sbjct 1168 TGTTCCAA 1175
> AT3G22770.1 | Symbols: | F-box associated ubiquitination effector
family protein | chr3:8047684-8048667 REVERSE LENGTH=984
Length=984
Score = 1153 bits (624), Expect = 0.0
Identities = 875/989 (88%), Gaps = 46/989 (5%)
Strand=Plus/Plus
Query 248 ATGGTGGTCATGATGAAGAATTTTAGGGTTTATTTGATGAGAGTCAATCTTCAAAAC-AC 306
|||||||||||||||| |||||||||||||||||||||||||||||||||| | ||| ||
Sbjct 1 ATGGTGGTCATGATGATGAATTTTAGGGTTTATTTGATGAGAGTCAATCTTGATAACAAC 60
Query 307 G--GTTG----------------A--ATCATCATGTATAAAACGCGAAGCTAAACTTATT 346
| |||| | |||||||||||||||||| ||||||||| |||||
Sbjct 61 GTCGTTGAATCATCATCATCATCATCATCATCATGTATAAAACGTGAAGCTAAAGTTATT 120
Query 347 GGCTTAGGCGATGATGAACTTGATATATCTCAAGTCTTTCACTGCGACGGTTTATTGTTA 406
|||||||||| || | ||||||||||||||||||||||||||||||||||||||||
Sbjct 121 AGCTTAGGCGACGAAGTTGATGATATATCTCAAGTCTTTCACTGCGACGGTTTATTGTTA 180
Query 407 TGCATCAGCATCACCAAAGACAAGACTAGGCTCGTGGTTTGGAACCCCTATTGGGGGCAT 466
||||||||||||||| ||| ||||||||||||||||||||||||||| ||||||||||||
Sbjct 181 TGCATCAGCATCACCCAAGCCAAGACTAGGCTCGTGGTTTGGAACCCGTATTGGGGGCAT 240
Query 467 ACCC-GTCCAATCGAGCCCACACATCAATTCAACAAACTCGATAGCTATTCGTATGCTCT 525
|||| || ||||||||||||||||||| ||||||||| |||| |||||||| ||||||||
Sbjct 241 ACCCGGT-CAATCGAGCCCACACATCAGTTCAACAAATTCGACAGCTATTCTTATGCTCT 299
Query 526 CGGATACGACAAGAGCAGCAAATCCCACAAAATCTTGAGGGGTATTACTTGTTTGA-AGC 584
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | |
Sbjct 300 CGGATACGACAAGAGCAGCAAATCCCACAAAATCTTGAGGTGTATTACTTGTTTGAGACC 359
Query 585 CC---TTC---A----A-AATCTACGATTTTAACTCTGATTCATGGAGGGTTCTTGATGT 633
|| ||| | | ||||||||||||||||||| |||||||||||||| || ||||
Sbjct 360 CCATTTTCATGAGTTCATAATCTACGATTTTAACTCTAATTCATGGAGGGTTTTTCATGT 419
Query 634 CACTCCAGACTGGCACTTAAGGACTATTCACCA-TGGCGTGTCTCTCAAGGGAAATGCGT 692
||||||||||||||| ||| |||||||| | | |||||||||||||||||||||||| |
Sbjct 420 CACTCCAGACTGGCAATTAGGGACTATT-AATAGTGGCGTGTCTCTCAAGGGAAATGCCT 478
Query 693 ACTGGTTTGCTGAAGAGAAGTATTCCGAAACCAGAG-AA-ATA-GACGATTTTTTCTTAG 749
|||| |||||||||||||||||| |||||| || | || | | || || |||||||||
Sbjct 479 TCTGGGTTGCTGAAGAGAAGTATTACGAAACAAGTGAAACAAACGAAGAGTTTTTCTTAC 538
Query 750 TCTGTTTTGATTTCACAAGAGAGACATTTGGGCCGCCTTTGCCTCTTCCGTTTGAGTTTG 809
||| ||||||||||||||||||||||||||| || | |||||||||||||||| ||||||
Sbjct 539 TCTCTTTTGATTTCACAAGAGAGACATTTGGACCACTTTTGCCTCTTCCGTTTCAGTTTG 598
Query 810 CTGTTTCTGAAGATGCTATGAGTGTATCTAGTGTTAGAGAAGAGCAGCTTGCTGTTTTAT 869
|| |||||||||||| |||||||||| | ||||||||| |||||||||||||||||||
Sbjct 599 TTGAATCTGAAGATGCTTTGAGTGTATCCAATGTTAGAGACGAGCAGCTTGCTGTTTTAT 658
Query 870 ATCAGCCGTGGGATACATTAAAGATGGAGATCTGGGTTACGTCTAAGATTGAGCCCAACG 929
||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||
Sbjct 659 ATCAGCCGTGGGATACATTAATGATGGAGATCTGGGTCACGTCTAAGATTGAGCCCAACG 718
Query 930 CGGTCTCCTGGAACAGCAAGGTGTTCTTATCAGTGAGTTTAA-AACAACTCATTGGCCCT 988
|||| || |||||||||||||||||||||||||||||| ||| || ||||||||||||||
Sbjct 719 CGGTGTCTTGGAACAGCAAGGTGTTCTTATCAGTGAGTATAAGAA-AACTCATTGGCCCT 777
Query 989 CAGTTTCATTTTTATTTGGGGAGTTTCTTCATTGACGAGGAGAAGAAAGTCGCTGTGGTT 1048
|||||||| |||| |||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 778 CAGTTTCAGTTTTGTTTGGGGAGTTTCTTCATTGACGAGGAGAAGAAAGTCGCTGTTGTT 837
Query 1049 TTTGATAAAGACTACAAAGATA-AGCGCAACATGGCTTACATCATTGGAGTGGATGGATC 1107
|||||||||| ||||| | ||| ||||| |||| ||||||||||||||||||||||||||
Sbjct 838 TTTGATAAAGGCTACAGA-ATACAGCGCTACATAGCTTACATCATTGGAGTGGATGGATC 896
Query 1108 CTTTAAAGAAGTGGATCTTGGAGAATCAGAC-GTAAGGTGTTACCCACTCGTGTGCTCTT 1166
| | ||||||||||||||||||||||||||| | ||||||||||||| | ||||| ||||
Sbjct 897 CATGAAAGAAGTGGATCTTGGAGAATCAGACAG-AAGGTGTTACCCAATTGTGTGGTCTT 955
Query 1167 ATGTTCCAAGTCTAGTGAAACTTAATTAG 1195
||||||||||||||||| |||||||||||
Sbjct 956 ATGTTCCAAGTCTAGTGCAACTTAATTAG 984
> AT3G24580.1 | Symbols: | F-box and associated interaction domains-containing
protein | chr3:8969162-8970298 FORWARD LENGTH=1137
Length=1137
Score = 481 bits (260), Expect = 8e-135
Identities = 890/1175 (76%), Gaps = 119/1175 (10%)
Strand=Plus/Plus
Query 76 GAAGATGTCCAATCTTCC-AAGAGATTTGTCGGAGGAGGTGCTCTGTAGAATTCCGTTGA 134
||||||||| ||||| || || |||||| |||| |||||||||| ||| || |||| |
Sbjct 6 GAAGATGTCTAATCTCCCTAA-TGATTTGGCGGAAGAGGTGCTCTCTAGGGTTTCGTTAA 64
Query 135 CATCTCTGAG-GCCTGTCCGATC-TACTTGCAAAAAGTGGAGCACTTTATCCAAATGTGG 192
|||||||||| | |||||| | |||||| ||| | |||| |||||||| ||| |||
Sbjct 65 CATCTCTGAGAAAC-GTCCGA-CTTACTTGTAAAGATTGGAATACTTTATCTAAAGGTGA 122
Query 193 GAGCTTTGCAAAGAAGCACCTT-G--CTCAAGCAAAAGTAGCA--GAA-GCAAAGGAGTT 246
||||||||||||||| |||||| | |||||||| ||||||| ||| | ||| |||||
Sbjct 123 GAGCTTTGCAAAGAATCACCTTGGTTATCAAGCAATAGTAGCAGCGAAGGAAAAAGAGTT 182
Query 247 CATGGTGGTCATGATGAAGAATTTTAGGGTTTATTTGATGAGAGTCAATC-TTCAAAAC- 304
||| ||||| |||||| | ||||||||||||||||||| ||||||| | |||| ||
Sbjct 183 TATGATGGTCCTGATGATGGATTTTAGGGTTTATTTGATTCGAGTCAA-CGTTCACAATG 241
Query 305 ACGGTTGAATCATCATGTATAAAACGC-GAAGCTAAACTTATTGGCTTAGGCGATGATGA 363
|| |||| || | |||| || | | |||| | | |||||| |||| |||||||| |
Sbjct 242 ACA-TTGAGTCGT---GTATTAAGC-CTGAAGGTGAGCTTATTAGCTTGGGCGATGAAGT 296
Query 364 ACTTGATATATCTCAAGTCTTTCACTGCGACGGTTTATTGTTATGCATCA-GCA---TCA 419
| ||| |||||||||||||||||||||||||||||||| ||||||||| | | | |
Sbjct 297 -C--GATGTATCTCAAGTCTTTCACTGCGACGGTTTATTGCTATGCATCACGGAAGATAA 353
Query 420 CCAAAGACAA-GACTA-GGCTCGTGGTTTGGAACCCCTATTGGGGGCATACCCG-TCCAA 476
| || || || | ||| || |||| |||||||||| ||||||||||| || || | |
Sbjct 354 CGAA-GATAACG-CTAAGG-TCGTTCTTTGGAACCCGTATTGGGGGCAAACACGGTGGA- 409
Query 477 TCGAGCCCACACATCAATT-CAACAAACTCGATA-GCTATTCGTATGCTCTCGGATACGA 534
||||| | ||| || |||| | ||||| | || | | ||| ||||||||||||||||| |
Sbjct 410 TCGAGTCTACAAAT-AATTTCCACAAATTGGACATG-TATACGTATGCTCTCGGATACAA 467
Query 535 CAAGAGCAGCAAATC---CC--A-C-A-AAA-TCTTGAGGGGTATT-ACTTGTT-TGA-A 582
|||||||||||||| || | | | ||| ||||||| |||| | || || | |
Sbjct 468 GAAGAGCAGCAAATCAAGCCGCAGCTACAAAATCTTGAGATTTATTGATTT-TTCTCCCA 526
Query 583 ---GCCCT---T-CAAAATCTACGATTTTAACTCTGATTCATGGAGGGTTCTTGATGTCA 635
| || | |||||||||| || | |||||||||||||||| ||||||||||||
Sbjct 527 CTTGTTCTGAGTTCAAAATCTACAATATCAACTCTGATTCATGGAAGGTTCTTGATGTGT 586
Query 636 CTCCAGACTGGCACTTAAGGACTATTC-AC-CATGGCGTGTCTCTCAAGGGAAATGCGTA 693
||||||||||| | || | | | || | | |||||||||||||||||||||| | ||
Sbjct 587 CTCCAGACTGGAAGATA-G-ATTCTTATATTCGTGGCGTGTCTCTCAAGGGAAATACATA 644
Query 694 CTGGTTTGCT-GAAGAGAAGTATTCCGAAACCAGAGAAATAGACGATTTTTTCTTAGTCT 752
|||| ||||| || |||| | | | || || | | ||| | ||| ||||||||
Sbjct 645 CTGGATTGCTAGA-GAGAGGCA--CGGATAC--G-GCCATA--C--TTT---CTTAGTCT 691
Query 753 GTTTTGATTTCACAAGAGAGACATTTGGGCCGCCTTTGCCTCTTCCGTTTGAGTT-TGCT 811
||||||||||||||||||||| |||| || ||| ||| ||||| ||| | || || |
Sbjct 692 GTTTTGATTTCACAAGAGAGAGATTTAGGTCGCGTTTACCTCTGCCGAGTCAGCCGTG-T 750
Query 812 GTTTCTGAAGATGCTATGAGTGTATCTAGTGTTAGAGAAGAGCAGCTTGCTGTTTTATAT 871
|||| | | ||| | ||||| |||||||||||||||||||||||||||||||||||| |
Sbjct 751 GTTT-T-A-GATACCGTGAGTCTATCTAGTGTTAGAGAAGAGCAGCTTGCTGTTTTATTT 807
Query 872 CAGC-CGTGG-GATACATTAAAGATGGAGATCTGGGTTACGTCTAAGATTGAGCCCAACG 929
||| | | | |||||| ||||| |||||||||| || | || ||||||||||| |
Sbjct 808 CAGTGC-TCAAG-TACATTGGAGATGCAGATCTGGGTAACAACCAAAATTGAGCCCAATG 865
Query 930 CGGTCTCCTGGAACAGCAAGGTGTTCTTATCAGTGAGTTTAAAACAACTCA-TTG-GCCC 987
|||| | ||||||||||||||||||||| | ||| | | | || |||| || |
Sbjct 866 CGGTGTTGTGGAACAGCAAGGTGTTCTTAGCTGTG-GAT-ATG-CA-CTCACTTAAGTT- 920
Query 988 TCAGTTTCATTTTT-AT-TTGGGGAGTTTCTTCATTGACGAGGAGAAGAAAGTCGCTGTG 1045
||||||||| || | || | |||||||| || ||||||||||||| ||| | |||
Sbjct 921 TCAGTTTCAAGTTAGAGCTTCG--AGTTTCTTTATCGACGAGGAGAAGAGAGTTGTTGTT 978
Query 1046 GTTTTTGATAAAGACTACAAA-GATA---AGCG-C-------AACATGGCTTACATCATT 1093
|||||||||||||| | ||| | || |||| | |||| ||||||||| ||
Sbjct 979 GTTTTTGATAAAGA--A-AAACGTTATTTAGCGTCCTCTCGCAACAAAGCTTACATCGTT 1035
Query 1094 GGAGTGGATGGATCCTTTAAAGAAGTGGATCTTGGAGAA-TC---AGACGTAAGGTGTT- 1148
|||||||||||| ||| || ||||||| |||||| | || |||| || ||||
Sbjct 1036 GGAGTGGATGGAACCTGGGAACAAGTGGACCTTGGA-ATGTCTGTAGACA-AATTTGTTT 1093
Query 1149 ACCCACTCGTGTGCTCTTATGTTCCAAGTCTAGTG 1183
||||||| ||||||||||||||||||||| |||||
Sbjct 1094 ACCCACTTGTGTGCTCTTATGTTCCAAGTTTAGTG 1128
> AT5G28527.1 | Symbols: | pseudogene, hypothetical protein |
chr5:10513366-10514577 FORWARD LENGTH=1212
Length=1212
Score = 329 bits (178), Expect = 3e-89
Identities = 707/945 (75%), Gaps = 105/945 (11%)
Strand=Plus/Plus
Query 316 ATCATGTATAAAACGCGAAGCTAAACTTATTGGCTTAGGCGA-T--GATGAACTTGATA- 371
||||||||| | | ||||||||||||||| || ||| ||| | ||||| | | |
Sbjct 301 ATCATGTATCGAGCATGAAGCTAAACTTATTAGCCTAGACGATTCATATGAAGTCCA-AG 359
Query 372 TATCTCAAGTCTTTCACTGCGACGGTTTATTGTTATGCATCAGCATCACCAAAGACAAGA 431
||||| |||| ||||||||||||||||||||||||||||| | || | || ||| | |
Sbjct 360 TATCTAAAGTTTTTCACTGCGACGGTTTATTGTTATGCATTA-CA--A--AA-GACCATA 413
Query 432 CTAGGCTCGTGGTTTGGAACCCCTATTGGGGGCATACCC-GTCCAATCGAGCCCACACAT 490
||| |||| | ||||||||||| |||||||| || ||| || | |||| |||| ||||
Sbjct 414 CTAAGCTCCTAGTTTGGAACCCGTATTGGGGTCAAACCAAGTGGA-TCGAACCCATACAT 472
Query 491 CAATTCA-ACAAACTCGA-TAGCTATTCGTATGCTCTCGGATACGACAAGAGCAGCAA-A 547
| |||| || |||| || | | ||||||||||| | |||||||||||||||||| |
Sbjct 473 -ACTTCATACCAACTGGAATTG-TATTCGTATGCGATTGGATACGACAAGAGCAGCCGCA 530
Query 548 TCCCACAAAATCTTGAGGG-----G-T--AT-T-ACT----TG--TTTGAAGCCCTTCAA 591
| ||||||||||||| | | || | || | |||| | | |||
Sbjct 531 GCT-ACAAAATCTTGAGTTTCCTTGATTCATATTACCCAACTACCTTTGTTGATAT-CAA 588
Query 592 AATCTACGATTTTAACTCTGATTCATGGAGGGTTCTTGATGTCACT-C-C-AGACTGGCA 648
||||||||| | |||||||| |||||||||||| ||||||||| || | | |||| ||||
Sbjct 589 AATCTACGAGTGTAACTCTGGTTCATGGAGGGTACTTGATGTCGCTGCTCCAGACGGGCA 648
Query 649 CTTA-AGGACTATTCACCATGGCGTGTCTCTCAAGGGAAATGCGTACTGGTTTGCTGAAG 707
|| | || ||| | ||| || ||||||||||||||| | |||||||||| | |||
Sbjct 649 GGTAGATGATTATG-AGGGTGGAGTCTCTCTCAAGGGAAATACTTACTGGTTTGTTAAAG 707
Query 708 AGAAGTATTCCGAAACCAGAGAAA-T-AG-ACGATTTTTTCTTAGTCTGTTTTGATTTCA 764
||||| ||| ||||| | || | | || |||| | ||||||||| |||||||||||||
Sbjct 708 AGAAGCCTTCAGAAACAACAGTAGGTGAGGACGACTCTTTCTTAGTATGTTTTGATTTCA 767
Query 765 CAAGAGAGACATTTGGGCCGCCTTTGCCTCTTCCGTTTGAGTTTGCTGTTTC-TGAAGAT 823
||| ||||| ||||||||||| ||||||||| |||||||||| | || || |||||||
Sbjct 768 CAAAAGAGAGATTTGGGCCGCTTTTGCCTCTACCGTTTGAGT--G--GTATCCTGAAGAT 823
Query 824 GCTATGAGTGTATCTAGTGTTAGAGAAGAGCAGCTTGCTGTTTTATATCAGCCG-TGGGA 882
| | | |||||||||||||||| ||||||||||| ||||||| | ||| | |||||
Sbjct 824 ACCGCCACTCTATCTAGTGTTAGAGAGGAGCAGCTTGCGGTTTTATTTTAGC-GATGGGA 882
Query 883 TACATTAAAGATGG-AGAT-CTGGGTTACGT-CTAAGATTGAGCCCAACGCGGTCTCCTG 939
|||| | | ||| |||| | || | || | |||||||||||||||||||||| || ||
Sbjct 883 CACATCGATG-TGGGAGATAC-GGATAAC-TACTAAGATTGAGCCCAACGCGGTGTCGTG 939
Query 940 GAACAGCAAGGT-GTTCTTATCAGTGAGTTTAAAACA---ACT--CATTGGCCCTCAG-T 992
|| | | | ||||||| |||||| | | |||| ||| | ||||| | | |
Sbjct 940 GA---G---G-TCGTTCTTAACAGTGAATG-AGAACACTCACTTGCTTTGGCTTTG-GCT 990
Query 993 TTCA-TTT----TTATTTGG-GGA-GTTTCTTCATTGACGAGGAGAAGAAAGTCGCTGTG 1045
|||| ||| ||| || ||| ||||||| ||||||||||||||| ||||||| |||
Sbjct 991 TTCAATTTGCGGTTACA-GGTGGAAGTTTCTTTATTGACGAGGAGAAGGAAGTCGCGGTG 1049
Query 1046 GTTTTTGATAAAGACTACAAAGAT-AAGC-G------CAA-C-ATGGCT-T-ACA--T-- 1089
||||||| ||||| ||||||||| || | ||| | | ||| | ||| |
Sbjct 1050 GTTTTTGGTAAAGTCTACAAAGACGAAAATGGTTATACAAACCACCGCTCTCACAACTTA 1109
Query 1090 -CA-TTGGAGTGGATGGATCCTTTAAAGAAGTGGATCTTGGAGAATC---AGAC-GTAAG 1143
|| ||||||||||||| ||||| ||| ||||| || |||||||||| |||| | ||
Sbjct 1110 GCAGTTGGAGTGGATGGTTCCTTGAAAAAAGTGTATGTTGGAGAATCTCCAGACTGAAAT 1169
Query 1144 GTGTTACCCACTCGTGTGCTCTTATGTTCCAAGTCTAGTGAAACT 1188
||||| ||||| || |||||||||||||||||| ||||| ||||
Sbjct 1170 -TGTTATCCACTTGT-TGCTCTTATGTTCCAAGTTTAGTGCAACT 1212
> AT3G23420.1 | Symbols: | F-box and associated interaction domains-containing
protein | chr3:8386273-8387324 REVERSE LENGTH=858
Length=858
Score = 268 bits (145), Expect = 7e-71
Identities = 377/482 (78%), Gaps = 44/482 (9%)
Strand=Plus/Plus
Query 105 CGGAGGAGGTGCTCTGTAGAATTCCGTTGACATCTCT--GAGGCCTGTCCGATCTACTTG 162
||||||||||||| | ||| ||||| |||||||||| || | | |||||| ||||||
Sbjct 5 CGGAGGAGGTGCTTTCTAGGGTTCCGATGACATCTCTAAGAAGAC--TCCGATTTACTTG 62
Query 163 CAAAAAGTGGAGCACTTTATCCAAATGTGGGAGCTTTGCAAAGAAGCACCTTG---CTCA 219
||||||||||| ||||||||| | |||| |||||||||||||||||||||||| |||
Sbjct 63 CAAAAAGTGGAACACTTTATCTAGATGTAGGAGCTTTGCAAAGAAGCACCTTGTTTGTCA 122
Query 220 AGCAAAAGTAGCAG--AAGCAAAG-GAGT-TCATGGTGGTCATGATGAAGAATTTTAGGG 275
|||||||||||| | ||| |||| |||| | | |||||||||||||| | |||||||||
Sbjct 123 AGCAAAAGTAGCTGCAAAGAAAAGAGAGTAT-AAGGTGGTCATGATGATGGATTTTAGGG 181
Query 276 TTTATTTGATGAG-AGTCAATCTTCAAAAC-ACGGTTGAATCATCATGTATAAAACGCGA 333
||||||||||| | | | |||||||| ||| || ||||||| | |||||||| || ||
Sbjct 182 TTTATTTGATGCGCA-TAAATCTTCAGAACAAC-GTTGAAT--T-GTGTATAAAGCGTGA 236
Query 334 AGC-TAAACTTATTGGCTTAGGCG-AT--GATGAACTTGATATAT-C-TCAAGTCTTTCA 387
| | | ||||| || | | || | ||| || || || | | ||| ||||||||
Sbjct 237 A-CGTGAACTTCTTTTCCCCGACGCTTCAGATCAAATT--TACGTCCGTCACGTCTTTCA 293
Query 388 CTGCGACGGTTTATTGTTATGCATCAGCATCACCAAAGACAAGACTAGGCTCGTGGTTTG 447
|||||||||||||||||||||||| ||| |||||||| ||||||| ||||||||
Sbjct 294 CTGCGACGGTTTATTGTTATGCAT---CAT---GAAAGACAACCCTAGGCTTGTGGTTTG 347
Query 448 GAACCCCTATTGGGGGCATACCC-GTCCAATCGAGCCCACACATCAATTCAACA-A-ACT 504
||||| ||| | || || |||| || |||||| | ||| || || || || | | |
Sbjct 348 TAACCCGTATAGTGGACAAACCCGGT-GGATCGAGACTACAAAT-AA-TCCTCAGAGATT 404
Query 505 CGATAGC-TATTCGTATGCTCTCGGATACGACAAG-AGCAGCAAATCCCACAAAATCTTG 562
||| || ||||||||||||||||||||| | | | || | |||||||||||||||||||
Sbjct 405 AGAT-GCATATTCGTATGCTCTCGGATACAATA-GCAGTACCAAATCCCACAAAATCTTG 462
Query 563 AG 564
||
Sbjct 463 AG 464
> AT4G17200.1 | Symbols: | F-box and associated interaction domains-containing
protein | chr4:9651108-9652253 FORWARD LENGTH=1146
Length=1146
Score = 102 bits (55), Expect = 8e-21
Identities = 363/502 (72%), Gaps = 59/502 (12%)
Strand=Plus/Plus
Query 591 AAATCTACGATTTTAACTCTGATTCATGGAGGGTTCTTGATGTCACTCCAGACTGGCACT 650
|||||||||| |||| ||||||||||||||||||||||||||||| ||| ||||| || |
Sbjct 491 AAATCTACGACTTTAGCTCTGATTCATGGAGGGTTCTTGATGTCAGTCCCGACTGCCA-T 549
Query 651 -TAAGGACT-ATTCACCATG-GCGTGTCTCTCAAGGGAAATGCGTACTGGT-TTGCTGAA 706
|| | | || || || | |||||||| | || ||||| | || | | ||||| ||
Sbjct 550 ATACCGTTTCAT-CAACA-GAGCGTGTCTTTGAATGGAAACACTTATTT-TCTTGCTCAA 606
Query 707 GAGAAG-TA-TTCCG-AA--ACCAGA-GAA-A--TAG-ACGAT----TT------TTTCT 746
|||||| || || | || | ||| ||| | ||| | ||| || ||| |
Sbjct 607 GAGAAGATAATTGTGGAAGGAGAAGAAGAAGAAGTAGTA-GATGAGATTGAAAAGTTT-T 664
Query 747 TAGTCTGTTTTGATTTCACAAGAGAGACATTTGGGCCGCCT-TTGCCTCTTCCGTTTGAG 805
|| ||||||||||||| || | ||||| ||||| |||| | || ||||| || ||| |
Sbjct 665 TACTCTGTTTTGATTTTACTACAGAGAGGTTTGGACCGCGTCTT-CCTCTGCCATTTCAC 723
Query 806 TTTGCTGTTTCTG-AAGATGCTATGAG-TGTATCTAGTGTTAGAGAAGAGCAGCTTGCTG 863
| || ||||| || || | || || | | ||||| |||||||||| || |||||||| |
Sbjct 724 TCTGATGTTT-TGGAA-A--CTGTG-GCTATATCTTGTGTTAGAGATGATCAGCTTGCGG 778
Query 864 TTTTATATCAGCCGTGGGATACATTAAAGATGGAGATCTGGGTTACGTCTAAGATTGAGC 923
| |||||||||| || || |||| | |||||| ||||| || ||||||| || |
Sbjct 779 TGTTATATCAGCGGTTTGAAACAT----G--GGAGATTTGGGTAACCACTAAGATCGATC 832
Query 924 CCAAC-GCGGTCTCCTGGAACAGCAAGGTGTTCTTATCAGTGAGTT-TAAAACAACTCAT 981
||| | ||||| ||||||| ||| | | || || |||||| | | | ||| || ||
Sbjct 833 CCA-CTGCGGTGTCCTGGA---GCATG-T-TT-TTGTCAGTG-GATATGGAACCACCCAC 884
Query 982 TGGCCCTCAGTTTC-ATTTTTATT-TGGGGAGTTTCTTCATTGACGAGGAGAAGAAAGTC 1039
||| |||||| | || | | |||| || ||||| |||||||| ||||| ||||||
Sbjct 885 TGGTTGTCAGTT-CGATGATGAAGCTGGG-AGCTTCTTTATTGACGAAGAGAACAAAGTC 942
Query 1040 GCTGTGGTTTTTGATAAAGACT 1061
||||| ||||| || |||||
Sbjct 943 GCTGTATTTTTTAATTCAGACT 964
> AT5G36730.1 | Symbols: | F-box and associated interaction domains-containing
protein | chr5:14436317-14437549 FORWARD LENGTH=1233
Length=1233
Score = 100 bits (54), Expect = 3e-20
Identities = 172/227 (76%), Gaps = 16/227 (7%)
Strand=Plus/Plus
Query 79 GATGTCCAATCTTCCAAGAGATTTGTCGGAGGAGGTGCTCTGTAGAATTCCGTTGACA-T 137
|||||||||||||||||||||||||| ||||||||| |||| ||| ||||| | | | |
Sbjct 6 GATGTCCAATCTTCCAAGAGATTTGTTGGAGGAGGTACTCTCTAGGGTTCCGGT-AAAGT 64
Query 138 CTCTGAGGC--CTGTCCGATCTACTTGCAAAAAGTGGAGCACTTTATCCAAATGTGGGAG 195
|| | | || | || |||| ||||| ||||| |||| | ||||| || | || |||
Sbjct 65 CTAT-A-GCAGCAGTGAGATCCACTTGTAAAAATTGGAACTCTTTAACCTACGGTCAGAG 122
Query 196 CTTTGCAAAGAAGCACCT-TGCTCAAGCAAAAGTAGCAGAA-GCAAAGGAG-TTCATGGT 252
||| | ||||||| || || | || ||| | | || || | ||||||| ||| ||||
Sbjct 123 CTTCACGAAGAAGC-TCTATGGTAAAACAATGGCAACA-AAGGAAAAGGAGTTTC-TGGT 179
Query 253 GGTCATGA-TGAAGAATTTTAG-GGTTTATTTGATGAGAGTCAATCT 297
|||||||| | | | | ||| | ||||||||| ||||| ||||||||
Sbjct 180 GGTCATGACT-ATGGA-TTTGGAGGTTTATTTAATGAGGGTCAATCT 224
> AT5G36820.1 | Symbols: | F-box and associated interaction domains-containing
protein | chr5:14495617-14496849 FORWARD LENGTH=1233
Length=1233
Score = 100 bits (54), Expect = 3e-20
Identities = 172/227 (76%), Gaps = 16/227 (7%)
Strand=Plus/Plus
Query 79 GATGTCCAATCTTCCAAGAGATTTGTCGGAGGAGGTGCTCTGTAGAATTCCGTTGACA-T 137
|||||||||||||||||||||||||| ||||||||| |||| ||| ||||| | | | |
Sbjct 6 GATGTCCAATCTTCCAAGAGATTTGTTGGAGGAGGTACTCTCTAGGGTTCCGGT-AAAGT 64
Query 138 CTCTGAGGC--CTGTCCGATCTACTTGCAAAAAGTGGAGCACTTTATCCAAATGTGGGAG 195
|| | | || | || |||| ||||| ||||| |||| | ||||| || | || |||
Sbjct 65 CTAT-A-GCAGCAGTGAGATCCACTTGTAAAAATTGGAACTCTTTAACCTACGGTCAGAG 122
Query 196 CTTTGCAAAGAAGCACCT-TGCTCAAGCAAAAGTAGCAGAA-GCAAAGGAG-TTCATGGT 252
||| | ||||||| || || | || ||| | | || || | ||||||| ||| ||||
Sbjct 123 CTTCACGAAGAAGC-TCTATGGTAAAACAATGGCAACA-AAGGAAAAGGAGTTTC-TGGT 179
Query 253 GGTCATGA-TGAAGAATTTTAG-GGTTTATTTGATGAGAGTCAATCT 297
|||||||| | | | | ||| | ||||||||| ||||| ||||||||
Sbjct 180 GGTCATGACT-ATGGA-TTTGGAGGTTTATTTAATGAGGGTCAATCT 224
> AT3G49510.1 | Symbols: | F-box family protein | chr3:18353842-18356508
FORWARD LENGTH=2038
Length=2038
Score = 76.8 bits (41), Expect = 5e-13
Identities = 267/370 (72%), Gaps = 39/370 (11%)
Strand=Plus/Plus
Query 596 TACGATTTTAACTCTGATTCATGGAGGGTTCTTGATGTCACTCCAGACTG-GCACT-TAA 653
|||||||||| ||||||||||||||||||||||||||||| ||| ||||| | | | ||
Sbjct 581 TACGATTTTAGCTCTGATTCATGGAGGGTTCTTGATGTCAATCCTGACTGTG-A-TATAC 638
Query 654 GGACT-ATTCA--CCATGGCGTGTCTCTCAAGGGAAATGCGTACTGGTTTGCTGAAGAGA 710
| | || || || || |||||| | ||||||||| | |||| || | | |||| |
Sbjct 639 CGTTTTAT-CAGACC--GGAGTGTCTTTGAAGGGAAATACTTACTTCTTCGGTCAAGA-A 694
Query 711 AGT-ATTCC-GAAACCAGAGAAATAGACGATTTT---TTCTT-AGTCTGTTTTGATTTCA 764
|| | | | || | || || ||| |||| || || | ||||||||||||| |
Sbjct 695 -GTGACACAAGCGACGAAAGTAACAGA-GATTGAAACTTGTTTACTCTGTTTTGATTTTA 752
Query 765 CAAGAGAGACATTTGGGCCGCCTTTGCCTCTTCCGTTTGAGT-T---TG-C-T-GTTTCT 817
||| ||||| |||||| ||| ||||||||| | |||| | | || | | |||| |
Sbjct 753 CAACAGAGAGATTTGGACCGTGTTTGCCTCTGCTGTTTTACCCTCCCTGTCCTAGTTT-T 811
Query 818 GAAGATGCTATGAGTGTATCTAGTGTTAGAGAAGAGCAGCTTGCTGTTTTATATCAGCCG 877
||| | || ||| | ||||| | |||||||| ||| |||| ||||| ||||| || ||
Sbjct 812 GAA-A--CTGTGACTCTATCTTGGGTTAGAGATGAGAAGCTCGCTGTGTTATA-CAACCA 867
Query 878 -TGGGAT-ACAT-TAA-AG-ATGGAGATCTGGG-TTACGTCTAAGATTGAGCCCAACGCG 931
| | | ||| | | | || ||||| | || || || |||||||||| ||||| |||
Sbjct 868 CTACG-TCACAGCTGAGATTATAGAGAT-TAGGATTTCGACTAAGATTGAACCCAATGCG 925
Query 932 GTCTCCTGGA 941
|| |||||||
Sbjct 926 GTATCCTGGA 935
> AT3G04250.1 | Symbols: | F-box associated ubiquitination effector
family protein | chr3:1121950-1122828 FORWARD LENGTH=879
Length=879
Score = 73.1 bits (39), Expect = 6e-12
Identities = 45/48 (94%), Gaps = 0/48 (0%)
Strand=Plus/Plus
Query 1007 GGGAGTTTCTTCATTGACGAGGAGAAGAAAGTCGCTGTGGTTTTTGAT 1054
||||||||||||||||||||||||||||||||| | |||||||||||
Sbjct 538 GGGAGTTTCTTCATTGACGAGGAGAAGAAAGTCTCCATGGTTTTTGAT 585
> AT5G60560.1 | Symbols: | F-box and associated interaction domains-containing
protein | chr5:24345949-24347172 FORWARD LENGTH=1125
Length=1125
Score = 67.6 bits (36), Expect = 3e-10
Identities = 38/39 (97%), Gaps = 0/39 (0%)
Strand=Plus/Plus
Query 1010 AGTTTCTTCATTGACGAGGAGAAGAAAGTCGCTGTGGTT 1048
|||||||||||||||||||||||||||||||| ||||||
Sbjct 934 AGTTTCTTCATTGACGAGGAGAAGAAAGTCGCCGTGGTT 972
> AT3G25090.1 | Symbols: | F-box associated ubiquitination effector
family protein | chr3:9140039-9141094 REVERSE LENGTH=978
Length=978
Score = 67.6 bits (36), Expect = 3e-10
Identities = 52/59 (88%), Gaps = 3/59 (5%)
Strand=Plus/Plus
Query 998 TTTTATTTG-GGGAGTTTCTTCATTGACGAGGAGAAGAAAGTCGC-TGTGGTTTTTGAT 1054
|||||| | || |||||||||||||||||||||||||||||||| | ||||||| |||
Sbjct 729 TTTTATAAGTGGAAGTTTCTTCATTGACGAGGAGAAGAAAGTCGCCTTTGGTTTT-GAT 786
> AT3G18330.1 | Symbols: | F-box family protein | chr3:6291127-6292257
REVERSE LENGTH=1131
Length=1131
Score = 63.9 bits (34), Expect = 4e-09
Identities = 36/37 (97%), Gaps = 0/37 (0%)
Strand=Plus/Plus
Query 596 TACGATTTTAACTCTGATTCATGGAGGGTTCTTGATG 632
||||||||||||||||||||||||||||||||| |||
Sbjct 526 TACGATTTTAACTCTGATTCATGGAGGGTTCTTAATG 562
> AT3G23680.1 | Symbols: | F-box associated ubiquitination effector
family protein | chr3:8526366-8527173 REVERSE LENGTH=708
Length=708
Score = 60.2 bits (32), Expect = 5e-08
Identities = 39/42 (93%), Gaps = 1/42 (2%)
Strand=Plus/Plus
Query 1010 AGTTTCTTCATTGACGAGGAGAAGAAAGTCGCTGT-GGTTTT 1050
|||||||||||||||||||||||||||||||| | ||||||
Sbjct 430 AGTTTCTTCATTGACGAGGAGAAGAAAGTCGCCATTGGTTTT 471
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 62098074165
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5