BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg479268
Length=2240
Score E
Sequences producing significant alignments: (Bits) Value
AT3G17840.1 | Symbols: RLK902 | receptor-like kinase 902 | chr3... 3249 0.0
AT1G48480.1 | Symbols: RKL1 | receptor-like kinase 1 | chr1:179... 1031 0.0
> AT3G17840.1 | Symbols: RLK902 | receptor-like kinase 902 | chr3:6106028-6108675
FORWARD LENGTH=2253
Length=2253
Score = 3249 bits (1759), Expect = 0.0
Identities = 2113/2274 (93%), Gaps = 63/2274 (3%)
Strand=Plus/Plus
Query 1 AAACCACACACAGAGCTTCTTCACTGAGAGCtttttttCTAGGGTttctctcttcgtttc 60
|||||||||||| |||||||||||||||||| |||||||||||||||||||||| |||||
Sbjct 1 AAACCACACACACAGCTTCTTCACTGAGAGC-TTTTTTCTAGGGTTTCTCTCTTTGTTTC 59
Query 61 ttacaatg-g------------a--g--aa---cc--tct-t-cgtattcctctccattc 96
|||||||| | | | || || ||| | | ||||| |||| ||||
Sbjct 60 TTACAATGCGACTCTTCTTCACACCGTCAATGTCCAATCTCTCCATATTCTTCTCGATTC 119
Query 97 ttctcctctctcttcctcttccttcAATCGGAGATCTCGCCGCCGACAAATCCGCTCTTC 156
||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 120 TTCTCCTTTCTCTTCCTCTTCCGTCAATCGGAGATCTCGCCGCCGACAAATCCGCTCTTC 179
Query 157 TCTCTCTTCGTTCCGCCGTCGGTGGTCGCACATTACTCTGGGACGTCAAACAAACCTCAC 216
||||| |||||||||||||||||||||| |||||||||||||||||||| ||||||||||
Sbjct 180 TCTCTTTTCGTTCCGCCGTCGGTGGTCGTACATTACTCTGGGACGTCAAGCAAACCTCAC 239
Query 217 CATGCAACTGGACCGGCGTCGTATGCGAAGGTGGTCGTGTTACCGCTCTTCGTCTTCCCG 276
|||||||||||||||||||| ||||||| |||||||||||||| ||||||||||||||||
Sbjct 240 CATGCAACTGGACCGGCGTCTTATGCGACGGTGGTCGTGTTACTGCTCTTCGTCTTCCCG 299
Query 277 GCGAAAAGCTCTCCGGTCATATACCGGAGGGTATTTTCGGTAATTTAACTCAGCTACGTA 336
| |||| |||||||||||||||||||||||||||||| ||||||||||||||||| || |
Sbjct 300 GTGAAACGCTCTCCGGTCATATACCGGAGGGTATTTTTGGTAATTTAACTCAGCTCCGGA 359
Query 337 CGCTTAGCCTCCGTCTCAATGGTCTTACTGGTACTCTTCCTTTGGATCTTGGAAGCTGCT 396
||||||| |||||||||||||||||||||||| |||||||||||||||| ||||||||||
Sbjct 360 CGCTTAGTCTCCGTCTCAATGGTCTTACTGGTTCTCTTCCTTTGGATCTCGGAAGCTGCT 419
Query 397 CCGATCTTCGGCGTTTGTACCTGCAAGGTAACAGATTCTCCGGTGAGATTCCGGAGGTTT 456
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 420 CCGATCTTCGGCGTTTGTACCTGCAGGGTAACAGATTCTCCGGTGAGATTCCGGAGGTTT 479
Query 457 TGTTTAGTCTTAGTAACCTTGTTAGGTTGAATCTAGCGGAGAATGAATTTACCGGCGAGA 516
||||||||||||||||||||||||||||||||||||| ||||||||||||| || ||||
Sbjct 480 TGTTTAGTCTTAGTAACCTTGTTAGGTTGAATCTAGCTGAGAATGAATTTAGTGGAGAGA 539
Query 517 TCTCTTCAGGGTTTAAAAACCTTACTAGGCTTAAGACTCTGTACTTGGAAAATAACAAGC 576
|||| ||||||||||||||||||||||||||||||||||||||| |||| ||||||||||
Sbjct 540 TCTCGTCAGGGTTTAAAAACCTTACTAGGCTTAAGACTCTGTACCTGGAGAATAACAAGC 599
Query 577 TCTCTGGCTCTCTTCTT-GA-TATGGATTTGCCTTTGGATCAGTTCAACGTTTCTAATAA 634
|||||||||||||| || || | |||||||| ||||||||||||||||||||||||||||
Sbjct 600 TCTCTGGCTCTCTT-TTAGACT-TGGATTTGTCTTTGGATCAGTTCAACGTTTCTAATAA 657
Query 635 CTTGTTGAACGGATCTATACCTAAGAGTCTGCAGAAATTTGATTCTGATTCGTTTGTGGG 694
|||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||
Sbjct 658 CTTGTTGAACGGATCTATACCTAAGAGTTTGCAGAAGTTTGATTCTGATTCGTTTGTGGG 717
Query 695 AACTTCACTCTGTGGCAAACCGCTTGTTGTCTGCTCTAATGAAGGAACTGTGCCTAGCCA 754
|||||| ||||| ||||||||||||||||||||||||||||| ||||||||||| |||||
Sbjct 718 AACTTCTCTCTGCGGCAAACCGCTTGTTGTCTGCTCTAATGAGGGAACTGTGCCAAGCCA 777
Query 755 GCCAATTTCTGTTGGAAATATTCCCGGAACTGTTGAAGGAAGTAAGGGGGAGAAGAAAAA 814
||||||||||||||| ||||||||||||||||||||||||||| ||| | |||||||||
Sbjct 778 GCCAATTTCTGTTGGCAATATTCCCGGAACTGTTGAAGGAAGTGAGGAGAAGAAGAAAAG 837
Query 815 TAAGAAGCTTTCCGGTGGAGCAATAGCTGGAATAGTGATTGGATGTGTTGTTGGTTTCTC 874
||||||||||| |||||||| |||||||||||||||||||||||||| |||||||| ||
Sbjct 838 GAAGAAGCTTTCTGGTGGAGCTATAGCTGGAATAGTGATTGGATGTGTGGTTGGTTTGTC 897
Query 875 CCTGATTGTTCTGGTTTTGATGGTTCTCTTTAGGAAAAAGGGGAACGAAAGAACAAGGGG 934
|||||||||| || |||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 898 CCTGATTGTTATGATTTTGATGGTTCTCTTTAGGAAAAAGGGGAACGAGAGAACAAGGGC 957
Query 935 CATCGACATTGCAACCATCAAGCAGCGTGAAGTTGAAATTCCTGGCGAGAAAGCGGCCGT 994
||| ||| |||||||||||||||| | |||||||||||||||||||||||||||||||||
Sbjct 958 CATTGACCTTGCAACCATCAAGCACCATGAAGTTGAAATTCCTGGCGAGAAAGCGGCCGT 1017
Query 995 GGAAGCACAGGAGAATAGGAGCTATGGAAATGAGTACTCCCCGGCTGCGA-TGAAAGCGG 1053
|||||||| ||||||||||||||||| |||||||||||| ||| |||| | ||||||| |
Sbjct 1018 GGAAGCACCGGAGAATAGGAGCTATGTAAATGAGTACTCTCCGTCTGC-AGTGAAAGCTG 1076
Query 1054 TGGAAGTGAACAGTTCAGGGATGAAGAAATTAGTGTTTTTTGGGAATGCGACAAAGGTTT 1113
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
Sbjct 1077 TGGAAGTGAACAGTTCAGGGATGAAGAAGTTAGTGTTTTTTGGGAATGCGACAAAGGTCT 1136
Query 1114 TCGATCTTGAGGATCTGTTGAGAGCTTCGGCGGAGGTTCTGGGGAAAGGAACGTTCGGGA 1173
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 1137 TCGATCTTGAGGATCTGTTGAGAGCTTCAGCGGAGGTTCTGGGGAAAGGAACGTTCGGGA 1196
Query 1174 CAGCTTATAAAGCGGTGCTTGACGCGGTGACATTGGTGGCTGTGAAGAGACTGAAGGATG 1233
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1197 CAGCTTATAAAGCGGTGCTTGACGCGGTGACATTGGTGGCTGTGAAGAGACTGAAGGATG 1256
Query 1234 TGACGATGGCGGACAGAGAGTTCAAGGAGAAGATCGAGGTTGTTGGGGCGATGGACCATG 1293
| |||||||||||||||||||| ||||||||||| |||||||||||||||||||| ||||
Sbjct 1257 TAACGATGGCGGACAGAGAGTTTAAGGAGAAGATTGAGGTTGTTGGGGCGATGGATCATG 1316
Query 1294 AGAACTTGGTGCCCTTGAGAGCGTACTATTACAGTGGAGACGAGAAGCTGCTTGTCTATG 1353
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1317 AGAACTTGGTGCCCTTGAGAGCGTACTATTACAGTGGAGACGAGAAGCTGCTTGTCTATG 1376
Query 1354 ACTTCATGCCTATGGGAAGCTTGTCAGCTCTCTTACACGGAAACAAAGGCGCAGGCCGGC 1413
|||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||
Sbjct 1377 ACTTCATGCCTATGGGAAGCTTATCAGCTCTCTTACACGGAAACAAAGGTGCAGGCCGGC 1436
Query 1414 CTCCATTGAACTGGGAAGTCAGATCAGGCATCGCCCTTGGAGCTGCTCGTGGCTTAGACT 1473
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1437 CTCCATTGAACTGGGAAGTCAGATCAGGCATCGCCCTTGGAGCTGCTCGTGGCTTAGACT 1496
Query 1474 ATCTTCACTCACAAGACCCACTGAGCTCTCACGGAAACGTCAAGTCCTCCAATATCCTTT 1533
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 1497 ATCTTCACTCACAAGACCCACTGAGCTCTCACGGAAACGTCAAGTCCTCCAATATCCTCT 1556
Query 1534 TAACAAACTCCCATGACGCACGAGTGTCTGATTTTGGCCTGGCTCAGCTTGTAAGCGCCT 1593
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 1557 TAACAAACTCCCATGACGCACGAGTGTCTGATTTCGGCCTGGCTCAGCTTGTAAGCGCCT 1616
Query 1594 CATCCACTACCCCAAACCGGGCCACTGGGTACCGTGCGCCAGAAGTAACTGACCCAAGGC 1653
||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1617 CATCCACAACCCCAAACCGGGCCACTGGGTACCGTGCGCCAGAAGTAACTGACCCGAGGC 1676
Query 1654 GTGTCTCACAGAAAGCGGACGTGTACAGCTTTGGTGTGGTATTGCTGGAGCTT-CTCACT 1712
|||||||||||||||||||||||||||||||||||||||| ||||| ||| || |||||
Sbjct 1677 GTGTCTCACAGAAAGCGGACGTGTACAGCTTTGGTGTGGTGTTGCTAGAG-TTGCTCACC 1735
Query 1713 GGAAAAGCGCCATCTAACTCGGTGATGAATGAGGAAGGAATGGATTTGGCGAGGTGGGTG 1772
|||||||| || ||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1736 GGAAAAGCTCCGTCTAACTCGGTGATGAACGAGGAAGGAATGGATTTGGCGAGGTGGGTG 1795
Query 1773 CATTCAGTGGCGAGAGAGGAGTGGAGGAATGAGGTTTTTGACTCGGAGCTGATGAGTATC 1832
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1796 CATTCAGTGGCGAGAGAGGAGTGGAGGAATGAGGTTTTTGACTCGGAGCTGATGAGTATC 1855
Query 1833 GAGACAGTGGTCTCGGTGGAAGAAGAGATGGCGGAAATGCTGCAGCTGGGCATTGACTGT 1892
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1856 GAGACAGTTGTCTCGGTGGAAGAAGAGATGGCGGAAATGCTGCAGCTGGGCATTGACTGT 1915
Query 1893 ACAGAGCAGCACCCAGACAAGCGGCCAGTAATGGTGGAGGTGGTGAGGAGGATCCAGGAG 1952
||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||
Sbjct 1916 ACAGAGCAGCACCCAGACAAGCGGCCAGTTATGGTGGAGGTGGTGAGAAGGATCCAGGAG 1975
Query 1953 TTGCGCCAATCGGGTTCAGATCGGGTGGGGTAAGAACCATCAGATGAAAGGAGACTTT-G 2011
||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||| |
Sbjct 1976 TTGCGCCAATCGGGTGCAGATCGGGTGGGGTAAGA-CCATCAGATGAAAGGAGACTTGAG 2034
Query 2012 CTCATGGGT-TCGTTCGATGATATGAAACGACGGCGTTTTCGGTGTTTGATGATTAAGTG 2070
|||| || | |||||||||| |||| || || ||||||| |||||| | | || |
Sbjct 2035 A-CATGAGTCT-GTTCGATGATCTGAAGCGGCGACGTTTTCAGTGTTT-A-G-TT---T- 2085
Query 2071 TTTAGTTTAAGAATATGGCGGGAATTTGAGTTAGGGTC---AGTTAGATGtttttaattt 2127
| | | |||||||||||||||| ||||| ||||| | |||||||||||||||||
Sbjct 2086 T--A----A-GAATATGGCGGGAATTAGAGTTGGGGTCGTTAATTAGATGTTTTTAATTT 2138
Query 2128 tggtgtttttttttcttttcttttttttttCTTGTGTGGGCACTGATGATGAGGAGTT-C 2186
|||| ||||||||| || ||| ||| | |||||||||||||||||||||||||| |
Sbjct 2139 TGGT-TTTTTTTTT-TTGG-TTTCTTT---CATGTGTGGGCACTGATGATGAGGAGTTTC 2192
Query 2187 GTTGTGGTTGTAATTATTAGTGCTTTTAACTTTTAACTTTATTTTCAATATTGT 2240
|| |||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 2193 GTGGTGGTTGTAATTATTAGTGCTTTTAACTTT-AACTTTATTTTCAATATTGT 2245
> AT1G48480.1 | Symbols: RKL1 | receptor-like kinase 1 | chr1:17918391-17920985
FORWARD LENGTH=2294
Length=2294
Score = 1031 bits (558), Expect = 0.0
Identities = 1507/1952 (77%), Gaps = 117/1952 (6%)
Strand=Plus/Plus
Query 84 ttcctctccattcttctcctctctcttcctcttccttcAA-TCGGAGATCTCGCCGCCGA 142
||||||||| | |||||||||||||| |||||||| |||| || ||||||| ||||||
Sbjct 133 TTCCTCTCCCTCCTTCTCCTCTCTCTCCCTCTTCCATCAACTC-AAGATCTCAACGCCGA 191
Query 143 CA-AATCCGCTCTTCTCTCTCTTCGTTCCGCCGTCGGTGGTCGCACATTACTCTGGGACG 201
|| || |||||||||||||||| || ||||||||||| || || ||||| | |||| ||
Sbjct 192 CAGAA-CCGCTCTTCTCTCTCTCCGCTCCGCCGTCGGAGGCCGTACATTTCGCTGGAACA 250
Query 202 TCAAACAAACCTCACCATGCAACTGGACCGGCGTCGTATGCGAAG-GTGGTC-GTGTTAC 259
||||||||||||| || || |||||| |||| ||| ||||| || || | | || ||
Sbjct 251 TCAAACAAACCTCGCCGTGTAACTGGGCCGGTGTCAAATGCG-AGAGT-AACAGAGTCAC 308
Query 260 CGCTCTTCGTCTT-CCCGGCGAAAAGCTCTCCGGTCATATACCGGAGGGTATTTTCGGTA 318
|||||| || ||| ||||||| ||||||||| | || || ||||||||||||||||
Sbjct 309 CGCTCTCCG-CTTACCCGGCGTTGCTCTCTCCGGTGACATTCCAGAGGGTATTTTCGGTA 367
Query 319 ATTTAACTCAGCTACGTACGCTTAGCCTCCGTCTCAATGGTCT-TACTGG-TACTCTTCC 376
| ||||||||||| ||||| |||||||| |||||||||| ||| | |||| | | || ||
Sbjct 368 ACTTAACTCAGCTCCGTACACTTAGCCTTCGTCTCAATGCTCTCT-CTGGCT-CACTCCC 425
Query 377 TTTGGATCTTGGAAGCTGC-TCCGATCTTCGGC-GTTTGTACCTGCAAGGTAACAGATTC 434
| ||||| | | || | ||| |||| || | || ||| | ||||| |||||||||
Sbjct 426 TAAAGATCTCAGTACCT-CTTCCAATCTCCGACACCTT-TACTTACAAGGAAACAGATTC 483
Query 435 TCCGGTGAGATTCCGGAGGTTTTGTTTAGTCTTAGTAACCTTGTTAGG-TTGAATCTAGC 493
||||| ||||| || || |||||||| ||||| ||| |||| || ||| || ||||| ||
Sbjct 484 TCCGGCGAGATACCTGAAGTTTTGTTCAGTCTCAGTCACCTCGTGAGGCTT-AATCTCGC 542
Query 494 GGAGAATGA-ATTTACCGGCGAGATCTCTTCAGGGTTT-AAAAACCTTACTAGGCTTAAG 551
|| | || ||||| || ||||||||| ||||| | ||||| || | ||| |||
Sbjct 543 TTCCAA-CAGCTTCACCGGAGAAATCTCTTCA-GGTTTCACGAACCTCACGAAGCTAAAG 600
Query 552 ACTCTG-TACTTGGAAAATAA-CAAGCTCTCTGGCTCTCTTCTTGA-TATGGATTTGCCT 608
|||||| | | | || ||||| ||| |||||||| || | | ||| | | ||||| |||
Sbjct 601 ACTCTGTTTC-TAGAGAATAATCAA-CTCTCTGGTTCAATCCCTGACT-TAGATTTACCT 657
Query 609 TTGGATCAGTTCAACGTTTCTAATAACTTGTTGAACGGATCTATACCTAAGAGTCTGCAG 668
|||| ||| ||||||||||| ||||||| ||||||||| ||||||||||||| ||| |||
Sbjct 658 TTGGTTCAATTCAACGTTTCGAATAACTCGTTGAACGGTTCTATACCTAAGAATCTTCAG 717
Query 669 AAATTTGATTCTGATTCGTTTGTGGGA-ACTTCACTCTGTGGCAAACCGCTTGTTGTCTG 727
| ||||| |||||||||||| | | |||||||| ||||||||||||||| | ||
Sbjct 718 AGGTTTGAGTCTGATTCGTTTCT-ACAGACTTCACTTTGTGGCAAACCGCTTAAACTTTG 776
Query 728 CT-CTAATGAAGGAACTGTGCCTAGCCAGCCAATTTCTGTTGG-AA-A-TATTCC-CGGA 782
| || |||||| |||||| ||||| ||||| | ||||| ||| || | | || | |
Sbjct 777 -TCCTGATGAAGAAACTGTACCTAGTCAGCCTACTTCTGGTGGAAACAGAACACCACCG- 834
Query 783 ACTGTTGAAGGAAGT-AAGGGGGAGAAGAAAAATAAGAAGCTTTCCGGTGGAGCAATAGC 841
| ||||||||||||| || | | |||||||||| || || |||||||||||||| || ||
Sbjct 835 AGTGTTGAAGGAAGTGAA-GAGAAGAAGAAAAAGAACAAACTTTCCGGTGGAGCTATTGC 893
Query 842 TGGAATAGTGATTGGATGTGTTGTTGGTTTCTCCCTGATTGTTCTGGTTTTGATGGTTCT 901
||||| ||||| |||||||| ||||||||| | |||||||| || | | ||||| ||
Sbjct 894 CGGAATTGTGATCGGATGTGTGGTTGGTTTCGCTTTGATTGTTTTGATACTAATGGTGCT 953
Query 902 CTTTAGGAAAAAGGGGAACGAA-AGAACAAGGGGC-ATCGACAT-TGCAACCATCAAGCA 958
|| | |||||||| | || || ||| ||| | || | || || | |||| ||||| ||
Sbjct 954 CTGTCGGAAAAAGAGTAA-TAAGAGATCAA-GAGCTGTTGATATCT-CAACAATCAAACA 1010
Query 959 GCGTGAAGTTGAAATTCCTGGCGAGAAAGCGGCCGTGG--AA--GCACA-GGAGAATAGG 1013
|| ||| |||||||||||| || |||| || |||| || | | | | | | ||
Sbjct 1011 GCAAGAACCTGAAATTCCTGGAGATAAAGAAGCGGTGGATAATGGTA-ATGTCTACTCGG 1069
Query 1014 AGCTATGGAAATG-AGTACT-CCCCG--G-CT-GCGA-TG-AAAG-CGGTGGAAGTGAAC 1064
| | || || || || | || | || | | | |||| | || |||| ||||
Sbjct 1070 TG-TCTGCTGCTGCAG--CTGCGGCGATGACTGGAAACGGAAAAGCCAGT-GAAGGGAAC 1125
Query 1065 AGTTCAGGGATGAAGAA-ATTAGTGTTTTTTGGGAATGCGACAAAGGTTTTCGATCTTGA 1123
|| ||| || |||||| || ||||| ||||| || ||||| |||||||| ||||||||
Sbjct 1126 GGTCCAGCGACGAAGAAGCTT-GTGTTCTTTGGTAACGCGACTAAGGTTTTTGATCTTGA 1184
Query 1124 GGATC-TGTTGAGAGCTTCGGCGGAGGTTCTGGGGAAAGGAACGTTCGGGACAGCTTATA 1182
|| | ||||||||||||| ||||||||||| |||||||||||||| ||||| || ||||
Sbjct 1185 AGA-CTTGTTGAGAGCTTCTGCGGAGGTTCTTGGGAAAGGAACGTTTGGGACGGCGTATA 1243
Query 1183 AAGCGGTGCTTGACGCGGTGAC-ATTGGTGGCTGTGAAGAGACTGAAGGATGTGACGATG 1241
| || ||||||||||||||||| || ||||| |||||||| |||||||||||| ||||
Sbjct 1244 AGGCAGTGCTTGACGCGGTGACGGTT-GTGGCGGTGAAGAGGTTGAAGGATGTGATGATG 1302
Query 1242 GCGGACAGAGAGTTCAAGGAGAAGATCGAGGTT-GTTGGGGCGATGGACCATGAGAACTT 1300
|| || | |||||| ||||||||||| || ||| ||||| |||||||| |||||||||||
Sbjct 1303 GCTGATAAAGAGTTTAAGGAGAAGATTGA-GTTGGTTGGTGCGATGGATCATGAGAACTT 1361
Query 1301 GGTGCCCTTGAGAGCGTACTATTACAGTGGAGACGAGAAGCTGCTTGTCTATGACTTCAT 1360
|||||| |||||||| ||||||| ||| |||| ||||| || |||||||||||||||||
Sbjct 1362 GGTGCCATTGAGAGCTTACTATTTCAGCAGAGATGAGAAACTTCTTGTCTATGACTTCAT 1421
Query 1361 GCCTATGGGAAGCTTGTCAGCTCTCTTACACGGAAACAAAGGCGCAGGCCGGCCTCCATT 1420
||||||||||||||| |||||||||||||| ||||||| ||| || || || |||| |
Sbjct 1422 GCCTATGGGAAGCTTATCAGCTCTCTTACATGGAAACAGAGGAGCGGGAAGGAGTCCACT 1481
Query 1421 GAACTGGGAAGTCAGATCAGGCATCGCCCTTGGAGCTGCTCGTGG-CTTAGACTATCTTC 1479
|||||||| || |||||| | || || |||| || |||||||| || |||||| ||||
Sbjct 1482 AAACTGGGATGTTAGATCAAGAATTGCTATTGGTGCAGCTCGTGGTCT-AGACTACCTTC 1540
Query 1480 ACTCACAAGACCCACTG-AGC-TCTCACGGAAACGTCAAGTCCTCCAATATCCTTTTAAC 1537
||||||||| | ||| | | |||||||| ||| |||| ||||| || ||||| |||||
Sbjct 1541 ACTCACAAGGC--ACTTCAACATCTCACGGCAACATCAAATCCTCAAACATCCTCTTAAC 1598
Query 1538 -AAACTCCCATGACGC-ACGAGTGTCTGATTTTGGCCTGGCTCAGCTTGTAAGCGCCTCA 1595
||| ||||| ||||| | ||| || || |||||| | || ||||| || | | |||
Sbjct 1599 GAAA-TCCCACGACGCTAA-AGTCTCAGACTTTGGCTTAGCCCAGCTCGTGGGATCATCA 1656
Query 1596 TCCACTACCCCAAACCGGGCCACTGGGT-ACCGTGCGCCAGAAGTAACTGACCC-AAG-G 1652
| || | |||||||| || || |||| ||||||| ||||||||||| || || || |
Sbjct 1657 GCAACAAATCCAAACCGCGCTAC-GGGTTACCGTGCTCCAGAAGTAACCGATCCGAAACG 1715
Query 1653 CGTGTCTCACAGAAAGCG-GACGTGTACAGCTTT-GGTGTGGTATTGCTGGAGCTTCTCA 1710
|||||| || ||| | | ||||||||||| ||| || ||||| ||||| ||||| |||
Sbjct 1716 CGTGTCGCA--GAAGG-GTGACGTGTACAG-TTTCGGAGTGGTGTTGCTTGAGCTGATCA 1771
Query 1711 CTGGAAAAGCGCCATCTAACTCGGTGATGAATGAGGAAGGAATGGATTTGGCGAGGTGGG 1770
| || ||||| || || |||||||||||||| ||||||||| | |||||| |||| ||||
Sbjct 1772 CGGGTAAAGCTCCTTCGAACTCGGTGATGAACGAGGAAGGAGTTGATTTGCCGAGATGGG 1831
Query 1771 TGCATTCAGTGGCGAGAGAGGAGTGGAGGA-ATGAGGTTTTTGACTCGGAGCTGATGAGT 1829
| | || ||||||||||| |||||||||| | || ||||| ||||||||| || | |||
Sbjct 1832 TTAAATCGGTGGCGAGAGATGAGTGGAGGAGA-GAAGTTTTCGACTCGGAGTTGCTTAGT 1890
Query 1830 ATCGAGACAGTGGTCTCGGTGGAAGAAGA-GATGGCGGAAATGCTGCAGCT-GGGCATTG 1887
| | ||| | | | | | |||| || ||||||||| ||| ||||||| |||| |||
Sbjct 1891 TTGGCGAC-G-GAT---GAAG-AAGA-GATGATGGCGGAGATGGTGCAGCTAGGGC-TTG 1942
Query 1888 ACTGTACAG--AGCAGCACCCAGACAAGCGGCCAGTA-ATGGT-GGAGGTGGTGAGGAGG 1943
| ||||| | | ||||| || ||| || |||| | | ||| | ||| ||||| |||| |
Sbjct 1943 AGTGTAC-GTCA-CAGCATCCGGACCAGAGGCCGG-AGATG-TCGGAAGTGGTTAGGAAG 1998
Query 1944 ATCCAGGAGTTGCG-CCA-AT-CGGGTTCAGA 1972
|| || | ||||| || || | ||||||||
Sbjct 1999 ATGGAGAATTTGCGACCTTATTCTGGTTCAGA 2030
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 111144006630
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5