BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg479285 Length=973 Score E Sequences producing significant alignments: (Bits) Value AT3G17980.1 | Symbols: | Calcium-dependent lipid-binding (CaLB... 1378 0.0 AT1G48590.2 | Symbols: | Calcium-dependent lipid-binding (CaLB... 366 2e-100 > AT3G17980.1 | Symbols: | Calcium-dependent lipid-binding (CaLB domain) family protein | chr3:6152121-6153434 FORWARD LENGTH=1072 Length=1072 Score = 1378 bits (746), Expect = 0.0 Identities = 920/997 (92%), Gaps = 39/997 (4%) Strand=Plus/Plus Query 1 AGAAACCAAAGCGACCTGCCCTAATCTTTAGCGATGATAGTTTAAACGGAACGAAACT-T 59 ||||||||||| ||||||||||||| ||||||||||||||||| |||||||||||| | | Sbjct 53 AGAAACCAAAGAGACCTGCCCTAATATTTAGCGATGATAGTTTGAACGGAACGAAA-TCT 111 Query 60 GACG-AAGAAACTAAAGAGACACATTTGAATCATCTTCATagaaaataa-aaatataaaa 117 |||| |||||||||||||||| | ||||||| ||||||| | ||| ||| | |||| Sbjct 112 GACGAAAGAAACTAAAGAGAC-C-TTTGAATTATCTTCA-CGGCGTTAACAAA-AAAAAA 167 Query 118 ---tcgtagaaagtgag--a--aag----aa--a-g-a-attaaaaaaggaaatGACAAC 161 | |||||||||||| | ||| || | | | ||||| ||||||||||||||| Sbjct 168 GGGTTGTAGAAAGTGAGTAAGGAAGAAATAATCAGGAACATTAATAAAGGAAATGACAAC 227 Query 162 GGCGTGTCCGGCGAGGACAAGCTCACTAATGGACGATCTCTTGGGCCTCCTTAGAATCCG 221 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 228 GGCGTGTCCGGCGAGGACAAGCTCACTAATGGACGATCTCTTGGGCCTCCTTAGAATCCG 287 Query 222 CATCAAACGTGGCGTCAATTTAGCCGTCCGTGACATCAGTAGCAGCGATCCTTACGTCGT 281 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 288 TATCAAACGTGGCGTCAATTTAGCCGTCCGTGACATCAGTAGCAGCGATCCTTACGTCGT 347 Query 282 CGTCAAAATGGGCAAACAGAAATTGAAGACTCGTGTCATTAACAAAGATGTAAATCCAGA 341 |||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 348 CGTCAAGATGGGCAAACAGAAATTGAAGACTCGTGTCATTAACAAAGATGTTAATCCAGA 407 Query 342 ATGGAATGAAGATTTGACTCTCTCCGTCACAGACTCCAATCTTACCGTCCTCTTGACGGT 401 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 408 ATGGAATGAAGATTTGACTCTCTCCGTCACAGACTCCAATCTTACCGTCCTCTTGACGGT 467 Query 402 GTACGATCACGACATGTTTAGCAAAGACGATAAGATGGGTGATGCTGAGTTCGAGATAAA 461 ||| |||||||||||||||||||||||||| |||||||| |||||||||||||||||||| Sbjct 468 GTATGATCACGACATGTTTAGCAAAGACGACAAGATGGGCGATGCTGAGTTCGAGATAAA 527 Query 462 GCCGTATATTGAGGCTTTGAGGATGCAGCTTGATGGACTTCCTAGTGGAACCATTGTGAC 521 ||| ||||||||||||||||||||||| || ||||||||||||||||||||||||||||| Sbjct 528 GCCCTATATTGAGGCTTTGAGGATGCAACTCGATGGACTTCCTAGTGGAACCATTGTGAC 587 Query 522 CACGGTTAAGCCAAGTCGTCGCAACTGTCTTGCCGAGGAGTCACGTGTCACATGGGTCGA 581 ||||||||||||||||||||| |||||||| |||||||||||||||||||| |||||||| Sbjct 588 CACGGTTAAGCCAAGTCGTCGTAACTGTCTAGCCGAGGAGTCACGTGTCACCTGGGTCGA 647 Query 582 CGGCAAGCTCGTCCAGGATCTCGTTCTCAGATTGCGACATGTGGAATGCGGAGAGGTCGA 641 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 648 CGGCAAGCTCGTCCAGGATCTCGTTCTCAGATTGCGACATGTGGAATGCGGAGAGGTCGA 707 Query 642 GGCTCAACTTCAATGGATTGATCTCCCTGGCTCCAAGGGTCTATGAATCttttttctttt 701 |||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 708 GGCTCAGCTTCAATGGATTGACCTCCCTGGCTCCAAGGGTCTATGAATCTTTTTTCTTTT 767 Query 702 tttCTTATTCACCGTTACTTTGAGTTGTTTTCTTTCAAATTGAACTAAACCAAGTAACAG 761 |||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 768 ---CTTATTTACCGTTACTTTGAGTTGTTTTCTTTCAAATTGAACTAAACCAAGTAACAG 824 Query 762 CATGGaaaaaaaaaCAAGTA-TTTCAATCTTGAAGGATATAGCTAATGAACTATAAACGC 820 |||||||||||| |||||| ||||||||||||||||||||| | |||||| |||| | Sbjct 825 CATGGAAAAAAA--CAAGTAATTTCAATCTTGAAGGATATAG-T---GAACTAGAAACAC 878 Query 821 GTATTAATCCATGGGAATATAAGGATTAAGAACATTGAGGGAAGTTTTGTTCCCATATGG 880 |||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||| Sbjct 879 GTATTAATCCATGGAAATATAAGGATTAAGAACGTTGAGGGAAGTTTTGTTCCCATATGG 938 Query 881 TGATCGAGTCCAAGTCGAGTGAGTCATGGTGGGCATGTAAATGCGGTGTATTGTTGATGT 940 |||||||||||||||||||| || |||||| ||||||||| |||||||||||||||| Sbjct 939 TGATCGAGTCCAAGTCGAGTC-GTGGTGGTGGATATGTAAATGTGGTGTATTGTTGATGT 997 Query 941 GTAT--AT-TT-GGGCTAGCTATGCCTTAAAGAAGGC 973 |||| || || ||||||||||||||||||| ||||| Sbjct 998 GTATGTATATTTGGGCTAGCTATGCCTTAAATAAGGC 1034 > AT1G48590.2 | Symbols: | Calcium-dependent lipid-binding (CaLB domain) family protein | chr1:17962839-17964429 FORWARD LENGTH=805 Length=805 Score = 366 bits (198), Expect = 2e-100 Identities = 396/489 (81%), Gaps = 24/489 (5%) Strand=Plus/Plus Query 220 CGCATCAAACGTGGCGTCAATTTAGCCGTCCGTGA-CATCAGTAGCAGCGATCCTTACGT 278 ||||||||||| |||||||| | || |||||||| | ||| || || ||||||||||| Sbjct 186 CGCATCAAACGCGGCGTCAACCTCGCAGTCCGTGATC-TCAACAGTAGTGATCCTTACGT 244 Query 279 CGTCGTCAAAATGGGC-AAACAGAAATTGAAGACTCGTGTCATTAACAAAGATGTAAATC 337 ||||||||||| ||| |||||||||||||||||||| || ||| ||||| ||||||||| Sbjct 245 TGTCGTCAAAAT-GGCAAAACAGAAATTGAAGACTCGAGTTATTTACAAAAATGTAAATC 303 Query 338 CAGAATGGAATGAAGATTTGACTCTCTCCGTCACAGACTCCAATCTTACCGTCCTCTTGA 397 | || ||||||||||| ||||||||||| || ||||| ||||||||||||||||||||| Sbjct 304 CTGAGTGGAATGAAGACTTGACTCTCTCAGTTTCAGACCCCAATCTTACCGTCCTCTTGA 363 Query 398 CGGTGTACGATCACGACATGTTTAGCAAAGACGATAAGATGGGTGATGCTGAGTTCGAGA 457 ||||||| ||| | |||| ||| | ||||||||| |||||||| ||||| || |||| || Sbjct 364 CGGTGTATGATTATGACACGTTCACCAAAGACGACAAGATGGGAGATGCAGAATTCGGGA 423 Query 458 TAAAGCCGTATA-TTGAGGCTTTGAGGATGCAGCTTG-ATGGA-CTTCC-TAGTGGAACC 513 | ||||||| | || | || |||| |||||| ||| ||| | || || | ||| ||| Sbjct 424 TTAAGCCGT-TCGTTAATGCGTTGAAGATGCA-CTTACATG-ATCTCCCATC-TGGGACC 479 Query 514 ATTGTGACCACGGTTAAGCCAAGTCGTCG-CAACTGTCTTGCCGAGGAGTCACGTGTCAC 572 || || |||||||| |||| || || || |||||| || ||||||||||| || || | Sbjct 480 ATCGTAACCACGGTCCAGCCTAGCCG-CGACAACTGCCTAGCCGAGGAGTCTCGGGTTAT 538 Query 573 ATGGGTC-GACGGCAAGCTCGTCCAGGATCTCGTTCTCAGATTGCGACATGTGGAATGCG 631 |||| || || || |||||||| || ||| | ||||| || || ||||||| ||||| | Sbjct 539 ATGG-TCTGATGGTAAGCTCGTTCAAGATATAGTTCTTAGGCTGAGACATGTCGAATGTG 597 Query 632 GAGAGGTCGAGGCTCAACTTCAATGGATTGATCT-CCCTGGCTCCAAGGGTCTATGAATC 690 | ||||| |||||||||||||||||||||||||| ||| || |||||||||||| | Sbjct 598 GTGAGGTTGAGGCTCAACTTCAATGGATTGATCTTCCC-GGA---AAGGGTCTATGA-T- 651 Query 691 tt-ttttct 698 || |||||| Sbjct 652 TTGTTTTCT 660 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 47621971356 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5