BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg479297
Length=1637
Score E
Sequences producing significant alignments: (Bits) Value
AT3G18080.1 | Symbols: BGLU44 | B-S glucosidase 44 | chr3:61915... 2534 0.0
AT3G18070.1 | Symbols: BGLU43 | beta glucosidase 43 | chr3:6187... 1491 0.0
> AT3G18080.1 | Symbols: BGLU44 | B-S glucosidase 44 | chr3:6191557-6194452
FORWARD LENGTH=1896
Length=1896
Score = 2534 bits (1372), Expect = 0.0
Identities = 1495/1555 (96%), Gaps = 5/1555 (0%)
Strand=Plus/Plus
Query 1 ATGAGATACATCAtctcacctccatggcctctcctccttctccttctcctcctctcttct 60
|||||| || | | ||||||||||||||||||||||||||| | |||||||||||||||
Sbjct 30 ATGAGACACCTTAGCTCACCTCCATGGCCTCTCCTCCTTCT-C--CTCCTCCTCTCTTCT 86
Query 61 ttcacctccggcgaatcctctccGTCCGCAGAAAAAGTCAAACTCG-ACACCGGTGGTCT 119
|||||||||||||||||||||| ||||||||||||| |||| | | |||||||||||||
Sbjct 87 TTCACCTCCGGCGAATCCTCTCTGTCCGCAGAAAAAAACAAA-TTGCACACCGGTGGTCT 145
Query 120 CAGTAGACAGAGTTTTCCTAAAGGATTCTTGTTTGGAACCGCCACGTCAGCTTATCAGGT 179
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||
Sbjct 146 CAGTAGACAGAGTTTTCCTAAAGGATTCGTGTTTGGAACCGCCACGTCAGCTTATCAAGT 205
Query 180 CGAAGGCGAGACTCATCAAGACGGTCGTGGCCCAAGCATTTGGGATGCCTTTGTCAAGAT 239
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 206 CGAAGGCGAGACTCATCAAGACGGTCGTGGCCCAAGCATTTGGGATGCCTTCGTCAAGAT 265
Query 240 TCCTGGGACTATCGCCAAGAATGCGACGGCTGAGATAACAGTGGACCAGTATCACCGTTA 299
|||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 266 TCCTGGGAAGATCGCCAAGAATGCCACGGCTGAGATAACAGTGGACCAGTATCACCGTTA 325
Query 300 CAAGGAAGATGTGGATTTGATGAAGAAACTGAACTTTGATGCTTACAGATTTTCCATTTC 359
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 326 CAAGGAAGATGTGGATTTGATGAAGAAACTGAACTTCGATGCTTACAGATTTTCCATTTC 385
Query 360 ATGGTCCAGAATATTCCCTGAGGGGAGTGGTAAAGTCAACTGGAAAGGAGTTGCTTATTA 419
||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 386 ATGGTCCAGGATATTCCCTGAGGGAAGTGGTAAAGTCAACTGGAAAGGAGTTGCTTATTA 445
Query 420 CAATAGATTGATTGATTACTTGGTCCAAAAAGGGATTACACCTTATGCAAATCTATACCA 479
||||||||||||||||||| |||| ||||||||||||||||||||||| ||||| |||||
Sbjct 446 CAATAGATTGATTGATTACATGGTTCAAAAAGGGATTACACCTTATGCTAATCTGTACCA 505
Query 480 CTACGATCTTCCATTGGCTCTGGAAAAGAAGTATAAAGGCTTGCTTGGTAGACAAGTAGT 539
||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||
Sbjct 506 CTACGATCTTCCATTGGCTTTGGAAAACAAGTATAAAGGCTTGCTTGGTAGACAAGTAGT 565
Query 540 GAACGATTTTGCGGATTACGCAGAGTTTTGTTTCAAGACATTTGGAGATAGAGTGAAAAA 599
||| ||||||||||||||||| |||||||||| |||||||||||| ||||||||||||||
Sbjct 566 GAAAGATTTTGCGGATTACGCTGAGTTTTGTTACAAGACATTTGGTGATAGAGTGAAAAA 625
Query 600 TTGGATGACGTTCAACGAGCCGCGTGTGGTAGCTGCTTTAGGTTATGATAACGGTATTTT 659
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 626 TTGGATGACGTTCAACGAGCCGCGTGTGGTAGCTGCTTTAGGTTATGATAATGGTATTTT 685
Query 660 CGCACCGGGTAGATGCTCTAAAGCATTTGGAAATTGCACTGAAGGAAACTCTGCGACCGA 719
|||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| ||
Sbjct 686 CGCACCGGGTAGATGCTCAAAAGCATTTGGAAATTGCACTGAAGGAAACTCCGCGACAGA 745
Query 720 GCCATACATAGTTTCTCATCACCTTATCTTGGCCCACGCAGCAGCAGTCCAAAGATACCG 779
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 746 GCCATACATAGTTACTCATCACCTTATCTTGGCCCACGCAGCAGCAGTCCAAAGATACCG 805
Query 780 CAAATATTACCAAGCGAAACAAAAGGGAAGAATTGGGATACTTTTAGATTTCGTTTGGTA 839
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 806 CAAATATTACCAAGCGAAACAAAAGGGAAGGGTTGGGATACTTTTAGATTTCGTTTGGTA 865
Query 840 TGAGCCACTTACTAGAAGTAAAGCAGATAATCTTGCAGCTCAAAGAGCAAGAGACTTCCA 899
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 866 TGAGCCGCTTACTAGAAGTAAAGCAGATAATCTTGCAGCTCAAAGAGCAAGAGACTTCCA 925
Query 900 TATAGGATGGTTTATTCACCCAATAGTATATGGAGAGTATCCAAAGACAATGCAGAACAT 959
||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 926 TATCGGATGGTTTATTCACCCATTAGTATATGGAGAGTATCCAAAGACAATGCAGAACAT 985
Query 960 TGTGAAAGAGAGGCTTCCAAAATTCACGAAGGAAGAAGTGAAAATGGTGAAAGGTTCCAT 1019
||||||||||||||||||||| |||||| || ||||||||||||||||||||||||||||
Sbjct 986 TGTGAAAGAGAGGCTTCCAAAGTTCACGGAGAAAGAAGTGAAAATGGTGAAAGGTTCCAT 1045
Query 1020 AGATTTCGTGGGAATAAACCAATACACAACTTATTACATGTCCGAACCACATCCCACCAC 1079
|||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1046 AGATTTTGTGGGAATAAACCAATACACGACTTATTACATGTCCGAACCACATCCCACCAC 1105
Query 1080 CAAACCTAAGGCTTTGGGTTATCAACAAGATTGGAATGTGGATTTTGGCTTTGCTAAGTT 1139
||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 1106 CAAACCTAAGGATTTGGGTTATCAACAAGATTGGAATGTGGAATTTGGCTTTGCTAAGTT 1165
Query 1140 GGGGAAGCCAATTGGTCCAAGGGCTTACTCGTATTGGTTATACAACGTACCATGGGGAAT 1199
|||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1166 GGGGAAGCCAATAGGTCCAAGGGCTTACTCGTCTTGGTTATACAACGTACCATGGGGAAT 1225
Query 1200 GTACAAGGCCTTGATGTATATGAAGGAACGTTACGGCAACCCAACTATGATTCTCTCTGA 1259
|||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||
Sbjct 1226 GTACAAGGCCTTGATGTATATGAAGGAACGTTACGGCAACCCTACTATGATCCTCTCTGA 1285
Query 1260 AAACGGTATGGATGACCCGGGAAACGTCACTCTAGCTCAAGGACTACACGACACGACGAG 1319
||||||||||||||||||||||||||| |||||||||||||||||||| ||||| |||||
Sbjct 1286 AAACGGTATGGATGACCCGGGAAACGTTACTCTAGCTCAAGGACTACATGACACCACGAG 1345
Query 1320 AATCAAGTATTACAAAGATTACTTAACCAACCTTAAGAAAGCTAGGGATGATGGAGCCAA 1379
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1346 AATCAAGTATTACAAAGATTACTTAACCAACCTTAAGAAAGCTAGGGATGATGGAGCCAA 1405
Query 1380 TGTGGTTGGATATTTTGCGTGGTCTTTGCTTGATAATTTTGAATGGTTATCAGGATATAC 1439
|||||||||||||||||||||||| ||||| |||||||| ||||||||||||||||||||
Sbjct 1406 TGTGGTTGGATATTTTGCGTGGTCATTGCTAGATAATTTCGAATGGTTATCAGGATATAC 1465
Query 1440 TTCAAGGTTTGGGATCGTTTATGTTGATTACAAAACATTGAAGAGGTACCCCAAGATGTC 1499
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1466 TTCAAGGTTTGGGATCGTTTATGTTGATTACAAAACATTGAAGAGGTACCCCAAGATGTC 1525
Query 1500 TGCTCAATGGTTTAAGCAACTTCTGAAACGAAACAACAAATGATCTCAATGTATC 1554
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1526 TGCTCAGTGGTTTAAGCAACTTCTGAAACGAAACAACAAATGATCTCAATGTATC 1580
> AT3G18070.1 | Symbols: BGLU43 | beta glucosidase 43 | chr3:6187294-6189947
FORWARD LENGTH=1506
Length=1506
Score = 1491 bits (807), Expect = 0.0
Identities = 1286/1515 (85%), Gaps = 42/1515 (3%)
Strand=Plus/Plus
Query 46 ctcctcctctcttctttcac-ctccggcgaatcctctccGTCCGCAGAAAAAGTCAAACT 104
|||||||||||| | ||| | |||||||||| || ||||||| ||| ||| | |
Sbjct 16 CTCCTCCTCTCTGC-TTCCCGCTCCGGCGAAGAGTCGCCGTCCGGAGACGCCGTCCCATT 74
Query 105 CGACACCGGTGGTCTCAGTAGACAGAGTTTTCCTAAAGGATTCTTGTTTGGAACCGCCAC 164
| |||||| ||||| | ||| |||||||||| ||||||||||||| |||||||||||
Sbjct 75 GGCCACCGGCGGTCTTAACAGAAAGAGTTTTCCGGAAGGATTCTTGTTCGGAACCGCCAC 134
Query 165 GTCAGCTTATCAGGTCGAAGGCGAGACTCATCAAGACGGTCGTGGCCCAAGCATTTGGGA 224
||||||||| ||||||||||||||||| || ||||| |||||||| ||||||||||||||
Sbjct 135 GTCAGCTTACCAGGTCGAAGGCGAGACCCACCAAGATGGTCGTGGTCCAAGCATTTGGGA 194
Query 225 TGCCTTTGTCAAGATTCCTGGGACTATCGCCAAGAATGCGACGGCTGAGATAACAGTGGA 284
||| || |||||||||||||| | || ||||| ||||| || |||||||||||||||||
Sbjct 195 TGCATTCGTCAAGATTCCTGGTAAGATTGCCAACAATGCCACTGCTGAGATAACAGTGGA 254
Query 285 CCAGTATCACCGTTACAAGGAAGATGTGGATTTGATGAAGAAACTGAACTTTGATGCTTA 344
||| ||||| ||||||||||||||||| ||||||||| |||| |||||| ||||||| ||
Sbjct 255 CCAATATCATCGTTACAAGGAAGATGTAGATTTGATGCAGAACCTGAACATTGATGCCTA 314
Query 345 CAGATTTTCCATTTCATGGTCCAGAATATTCCCTGAGGGGAGT--GGTAAAGTCAACTGG 402
||||||||||||||||||||| |||||||||||||| |||| | |||||| |||||| |
Sbjct 315 CAGATTTTCCATTTCATGGTCTAGAATATTCCCTGA-GGGA-TCCGGTAAAATCAACTCG 372
Query 403 AAAGGAGTTGCTTATTACAATAGATTGATTGATTACTTGGTCCAAAAAGGGATTACACCT 462
|| |||||||||||||||||||||||||| ||||||||| || ||||||||||||||||
Sbjct 373 AATGGAGTTGCTTATTACAATAGATTGATCGATTACTTGATCGAAAAAGGGATTACACCG 432
Query 463 TATGCAAATCTATACCACTACGATCTTCCATT-GGCTCTGGAA-AAGAAGTATAAAGGCT 520
||||| ||||| |||||||| || ||||| || | || ||||| || |||||| |||||
Sbjct 433 TATGCTAATCTGTACCACTATGACCTTCCTTTAGCCT-TGGAACAA-AAGTATCAAGGCC 490
Query 521 TGCTTGGTAGACAAGTAGTGAACGATTTTGCGGATTACGCAGAGTTTTGTTTCAAGACAT 580
||||| ||| || | || ||| |||||||||||||||||||||||||||||||| ||||
Sbjct 491 TGCTTAGTAAAC-A--AG-GAA-GATTTTGCGGATTACGCAGAGTTTTGTTTCAA-ACAT 544
Query 581 TTGGAGATAGAGTGAAAAATTGGATGACGTTCAACGAGCCGCGTGTGGTAGCTGCTTTAG 640
|||||||||||||||| || ||||||||||| |||||||| ||||| ||||||||| |||
Sbjct 545 TTGGAGATAGAGTGAAGAACTGGATGACGTTTAACGAGCCTCGTGTAGTAGCTGCTCTAG 604
Query 641 GTTATGATAACGGTATTTTCGCACCGGGTAGATGCTCTAAAGCATTTGGAAATTGCACTG 700
||||||||||||| ||||| || ||||||||||||||| ||||||||||||| |||||||
Sbjct 605 GTTATGATAACGGCATTTTTGCGCCGGGTAGATGCTCTGAAGCATTTGGAAACTGCACTG 664
Query 701 AAGGAAACTCTGCGACCGAGCCATACATAGTTTCTCATCACCTTATCTTGGCCCACGCAG 760
| ||||||||||| || || |||||||| ||| | ||||||||||||||||| || ||||
Sbjct 665 ATGGAAACTCTGCAACTGAACCATACATTGTTGCACATCACCTTATCTTGGCACATGCAG 724
Query 761 CAGCAGTCCAAAGATACCG-CAAATATTACCAAGCGAAACAAAAGGGAAGAATTGGGATA 819
|||| ||||| |||||||| |||| |||| || | ||||||||||||||| |||||||
Sbjct 725 CAGCCGTCCAGAGATACCGCCAAA-ATTATCAGGAGAAACAAAAGGGAAGGGTTGGGATT 783
Query 820 CTTTTAGATTTCGTTTGGTATGAGCCACTTACTAGAAGTAAAGCAGATAATCTTGCAGCT 879
|| | ||||| ||||||| |||||||||||| || ||| ||||||| ||| || |||
Sbjct 784 CTACTGGATTTTGTTTGGTTTGAGCCACTTACGAGTAGTCAAGCAGACAATGACGCTGCT 843
Query 880 CAAAGAGCAAGAGACTTCCATATAGGATGGTTTATTCACCCAATAGTATATGGAGAGTAT 939
||||||||||||||||||||| | ||||||||||||||||||||||| |||||||||||
Sbjct 844 CAAAGAGCAAGAGACTTCCATGTTGGATGGTTTATTCACCCAATAGTGTATGGAGAGTAC 903
Query 940 CCAAAGACAATGCAGAACATTGTGAAAGAGAGGCTTCCAAAATTCA-CGAAGGAAGAAGT 998
||||| || |||| ||||| ||||| ||||| ||||| || |||| || ||||||||||
Sbjct 904 CCAAATACGTTGCAAAACATCGTGAAGGAGAGACTTCCGAAGTTCACCG-AGGAAGAAGT 962
Query 999 GAAAATGGTGAAAGGTTCCATAGATTTCGTGGGAATAAACCAATACACAACTTATTACAT 1058
|||||||||||||||||||||||| |||||||| |||||||||||||||||||||| |||
Sbjct 963 GAAAATGGTGAAAGGTTCCATAGACTTCGTGGGGATAAACCAATACACAACTTATTTCAT 1022
Query 1059 GTCCGAACC-ACA-TCCC-ACCACCAAACCTAAGGCTTTGGGTTATCAACAAGATTGGAA 1115
||| || || | | | | ||||| | ||||| | ||||||||||||||||||||||||
Sbjct 1023 GTCTGATCCTAAAATATCTACCAC-A--CCTAAAGATTTGGGTTATCAACAAGATTGGAA 1079
Query 1116 TGTGGA-TTTTGGCTTTGCTAAGT-TGGGGA-AGCCAATTGGTCCAAGGGCTTACTC-GT 1171
|| | |||| |||||| ||| |||| | | ||||||||||||||||| | || |
Sbjct 1080 CGTC-ACTTTTAACTTTGCAAAGAATGGG-ACA-CCAATTGGTCCAAGGGCACATTCAGA 1136
Query 1172 ATTGGTTATACAACGTACCATGGGGAATGTACAAGGCCTTGATGTATAT-GAAGGAACGT 1230
|| |||||||||| || ||||||||||||||||| || || ||||| || || |||||||
Sbjct 1137 AT-GGTTATACAATGTCCCATGGGGAATGTACAAAGCTTTAATGTACATTGA-GGAACGT 1194
Query 1231 TACGGCAACCCAACTATGATTCTCTCTGAAAACGGTATGGATGACCCGGGAAACGTCACT 1290
|| ||||||||||||||||||||||| ||||||||||||||||| ||||| ||| | |||
Sbjct 1195 TATGGCAACCCAACTATGATTCTCTCCGAAAACGGTATGGATGATCCGGGCAACATAACT 1254
Query 1291 CTAGCTCAAGGACTACACGACACGACGAGAATCAAGTATTACAAAGATTACTTAAC-CAA 1349
||| ||||||||||| | || || || ||| |||||||||| | ||| || ||| ||
Sbjct 1255 CTAACTCAAGGACTAAATGATACAACAAGAGTCAAGTATTATAGAGACTATTTAGTGCAG 1314
Query 1350 CCTTAAGAAAGCTAGG-GATGATGGAGCCAATGTGGTTGGATATTTTGCGTGGTCTTTGC 1408
| |||| ||||| || || |||||||||||| | |||||||||||||||||| ||||
Sbjct 1315 C-TTAAAAAAGC-AGTAGACGATGGAGCCAATCTAACTGGATATTTTGCGTGGTCGTTGC 1372
Query 1409 TTGATAATTTTGAATGGTTATCAGGATATACTTCAAGGTTTGGGATCGTTTATGTTGATT 1468
| |||||||| |||||||||||||||||||||||||||||||| || || || |||||||
Sbjct 1373 TAGATAATTTCGAATGGTTATCAGGATATACTTCAAGGTTTGGAATAGTGTACGTTGATT 1432
Query 1469 ACAAA-ACATTGAAGAGGTACCCCAAGATGTCTGCTCAATGGTTTAAGCAACTTCTGAAA 1527
|||| || |||||||| |||||||||||||||||| ||||||||| |||||| |||||
Sbjct 1433 ACAAGGAC-TTGAAGAGATACCCCAAGATGTCTGCTTTATGGTTTAAACAACTTTTGAAA 1491
Query 1528 CGAAACAACAAATGA 1542
|| || | ||||||
Sbjct 1492 CGGGACCAGAAATGA 1506
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 80873077995
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5