BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg479312
Length=1395
Score E
Sequences producing significant alignments: (Bits) Value
AT3G18180.1 | Symbols: | Glycosyltransferase family 61 protein... 1421 0.0
AT3G18170.1 | Symbols: | Glycosyltransferase family 61 protein... 1066 0.0
> AT3G18180.1 | Symbols: | Glycosyltransferase family 61 protein
| chr3:6230270-6231878 FORWARD LENGTH=1413
Length=1413
Score = 1421 bits (769), Expect = 0.0
Identities = 930/1008 (92%), Gaps = 10/1008 (1%)
Strand=Plus/Plus
Query 393 ACCTTATGCGAGAAAAGACCAAGGTGCGGCCATGAAACGCGTGAGAGAATGGACGGTGAA 452
||||||||||||||||||||||| | | ||||||||||||||||||||||||||||||||
Sbjct 411 ACCTTATGCGAGAAAAGACCAAGTTCCTGCCATGAAACGCGTGAGAGAATGGACGGTGAA 470
Query 453 ATTAATACAAAACGCTAGTTTATCACGTTGCGTTAAGAATCACAGCGTTCCGGCGATTCT 512
|||| |||||||||||||||||||||| ||||||| ||||||||||||||||||||||||
Sbjct 471 ATTAGTACAAAACGCTAGTTTATCACGCTGCGTTAGGAATCACAGCGTTCCGGCGATTCT 530
Query 513 TTTCTCCCTCGGAGGCTTCTCGTTGAACAATTTCCATGATTTCACGGACATCGTGATTCC 572
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 531 TTTCTCTCTCGGAGGCTTCTCGTTGAACAATTTCCATGATTTCACGGACATCGTGATTCC 590
Query 573 TCTGTACACGACGGCGCGTAGATTC-GACGGTGAAGTTCAATTCCTCGTGACGAACAAGA 631
||||||||||||||||||||||||| | |||||||||||| |||||||||||||||||||
Sbjct 591 TCTGTACACGACGGCGCGTAGATTCAG-CGGTGAAGTTCAGTTCCTCGTGACGAACAAGA 649
Query 632 ATCCATGGTGGATCAGCAAATTTAAGGGATTAGTGAGGAAATTTTCGAATTATGAAGTGA 691
||| | |||||||| ||||||||||| ||||||||||||| | || ||||| |||||||
Sbjct 650 ATCTTTTGTGGATCAACAAATTTAAGGAATTAGTGAGGAAACTCTCTAATTACGAAGTGA 709
Query 692 TTTACATCGACGAAGAAGACGAAACGCATTGTTTCGGCAGCGTCATTGTCGGTCTCAATC 751
||||||||||||||||||||||||||||||||||| |||||||||| || ||||||||||
Sbjct 710 TTTACATCGACGAAGAAGACGAAACGCATTGTTTCAGCAGCGTCATCGTTGGTCTCAATC 769
Query 752 GCCACCGTGATTATGACAAAGAACTAACGA-TCGATCTTTCGAATTCGGAGTGTTCCATG 810
|||||||||||||||||||||| ||||||| | |||| |||||||||||||| ||| |||
Sbjct 770 GCCACCGTGATTATGACAAAGAGCTAACGACT-GATCCTTCGAATTCGGAGTATTCAATG 828
Query 811 TCCGATTTCCGGAAATATC-TCAGAGACGCATACTCGTTGAGAAACGCCGCCGTGTCTAC 869
|||||||||||||||| || |||||||| ||||||| ||||||||| |||||||| ||||
Sbjct 829 TCCGATTTCCGGAAAT-TCCTCAGAGACACATACTCATTGAGAAACTCCGCCGTGACTAC 887
Query 870 GTGGCGGAGGCCACGGCTTCTAATTTTGTCGAGGAGCATATCGCGAGCGTTTGTGAACGC 929
| |||||| ||||||| |||| |||||||| ||||||| |||||||||||||||||||||
Sbjct 888 GAGGCGGAAGCCACGGATTCTGATTTTGTCTAGGAGCAGATCGCGAGCGTTTGTGAACGC 947
Query 930 TGATGAAATCGCTAGAGCGGCGAGACAGATGGGATTCAATGTCGTGGTGGTGGAAGCAAA 989
| |||||||||||||||||||||||| || ||||| || |||||||||| |||||||||
Sbjct 948 GGGTGAAATCGCTAGAGCGGCGAGACAAATCGGATTTAAAGTCGTGGTGGCGGAAGCAAA 1007
Query 990 CACCGAAATTGCGAGTTTCGCACA-AACTGTGAATTCCTGTGACGTGATGCTTGGCGTTC 1048
||| ||||| |||||||||||| | ||||||||| ||||||||||||||||| |||||||
Sbjct 1008 CACGGAAATCGCGAGTTTCGCA-ATAACTGTGAACTCCTGTGACGTGATGCTCGGCGTTC 1066
Query 1049 ACGGCGCGGG-ACTGACGAACATGGTGTTCTTACCAGAGAACGCGGTCGTGATTCAGATT 1107
|||||||||| | |||||||||||||||||||||| || |||||| ||||||||||||||
Sbjct 1067 ACGGCGCGGGGA-TGACGAACATGGTGTTCTTACCTGATAACGCGATCGTGATTCAGATT 1125
Query 1108 CTTCCGATCGGTGGATTCGAGTGGCTTGCGAACACGGATTTCGAGGATCCGTCGAAGGGA 1167
||||||||||||||||||||||||||||| || | |||||||||| |||||||||||||
Sbjct 1126 CTTCCGATCGGTGGATTCGAGTGGCTTGCAAAGATGGATTTCGAGTATCCGTCGAAGGGC 1185
Query 1168 ATGAATCTGAGGTATTTGGAGTATAAGATCGCGGCGGAGGAGAGTACGCTGGCGAAGCAG 1227
||||||||||||||||||||||| |||||| ||||||||||||| || |||| |||||||
Sbjct 1186 ATGAATCTGAGGTATTTGGAGTACAAGATCACGGCGGAGGAGAGCACACTGGTGAAGCAG 1245
Query 1228 TACGGACGTGATCACGAGATCGTTAGAGATCCATCGGCGGTTGCAAAACGCGGGTGGGGA 1287
|||||||| ||||||||| ||||||||||||||| ||| |||||||||||||||||||||
Sbjct 1246 TACGGACGCGATCACGAGTTCGTTAGAGATCCATTGGCCGTTGCAAAACGCGGGTGGGGA 1305
Query 1288 ACGTTCAAGTCGGTTTATTTGGTACAGCAGAACGTGAGCGTTGATATAAACCGGTTCAAG 1347
|| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 1306 ACTTTCAAGTCGGTTTATTTGGTACAGCAGAACGTTAGCGTTGATATAAACCGGTTCAAG 1365
Query 1348 CCGGTTCTTGTCAAAGCTCTTGAGTTATTACATAATCAGTCGGTGTAA 1395
| |||||||||||||||||||||| |||| ||||||||||| ||||||
Sbjct 1366 CTGGTTCTTGTCAAAGCTCTTGAGCTATTGCATAATCAGTCAGTGTAA 1413
Score = 241 bits (130), Expect = 2e-62
Identities = 148/157 (94%), Gaps = 0/157 (0%)
Strand=Plus/Plus
Query 1 ATGACAAAGAAGGATCTTCTTTACGATTCAATACTTGCTCGTAGCTTTAGCAAAACTGAT 60
||||||||||||||| ||||||||||| || ||||||||||||| |||||||||||||||
Sbjct 1 ATGACAAAGAAGGATATTCTTTACGATACAGTACTTGCTCGTAGTTTTAGCAAAACTGAT 60
Query 61 CAGATGAGACTTGGCTTTGGAGCTTTCATTGCCTCTCTTCTCTTTGTCTTCACTCTTTGC 120
|||| ||||||| ||| ||||||||||||||||||||||||||| ||| |||||||||||
Sbjct 61 CAGAAGAGACTTTGCTGTGGAGCTTTCATTGCCTCTCTTCTCTTGGTCCTCACTCTTTGC 120
Query 121 ACTGTCGTTAAACCTTATCTCAGCCCTTTACCAATCG 157
|||||||||||||||||||||||||||||||||||||
Sbjct 121 ACTGTCGTTAAACCTTATCTCAGCCCTTTACCAATCG 157
Score = 207 bits (112), Expect = 2e-52
Identities = 119/122 (98%), Gaps = 2/122 (2%)
Strand=Plus/Plus
Query 253 ACTACCAACACTACAATCTCCAAAGAAGAAGTTATTTCAGAGTGCAATAAAATGGAGAAA 312
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 214 ACTACCAACACTACAATCTCCAAAGAAGAAGTTATTTCAGAGTGCAATAAAATGGAGAAA 273
Query 313 CCTATCTGTCACTGTAACA-AGCTAGGAAGCAAAGAGTTTTGCGATCTAAGCGGCGACGT 371
||||||||||||||||||| | |||||||||||||||||||||||| |||||||||||||
Sbjct 274 CCTATCTGTCACTGTAACACA-CTAGGAAGCAAAGAGTTTTGCGATGTAAGCGGCGACGT 332
Query 372 AA 373
||
Sbjct 333 AA 334
> AT3G18170.1 | Symbols: | Glycosyltransferase family 61 protein
| chr3:6228342-6229662 FORWARD LENGTH=1321
Length=1321
Score = 1066 bits (577), Expect = 0.0
Identities = 814/929 (88%), Gaps = 14/929 (2%)
Strand=Plus/Plus
Query 461 AAAACGCTAGTTTATCACGTTGCGTTAAGAATCACAGCGTTCCGGCGATTCTTTTCTCCC 520
||||||||| ||| || |||||||||| ||||||||||||||||||||| ||||||| |
Sbjct 275 AAAACGCTAATTTCTCGCGTTGCGTTAGGAATCACAGCGTTCCGGCGATGATTTTCTCTC 334
Query 521 TCGGAGGCTTCTCGTTGAACAATTTCCATGATTTCACGGACATCGTGATTCCTCTGTACA 580
||||||||| |||| ||||||||||||| |||||||| || || ||||||||||||||||
Sbjct 335 TCGGAGGCTACTCGATGAACAATTTCCACGATTTCACCGATATAGTGATTCCTCTGTACA 394
Query 581 CGACGGCGCGTAGATTCGACGGTGAAGTTCAATTCCTCGTGACGAACAAGAATCCATGGT 640
||||||||||| ||||| |||| ||||| || || |||||||||||||||| ||||| ||
Sbjct 395 CGACGGCGCGTCGATTCAACGGAGAAGTACAGTTTCTCGTGACGAACAAGAGTCCATCGT 454
Query 641 GGATCAGCAAATTTAAGGGATTAGTGAGGAAATTTTCGAATTATGAAGTGATTTACATCG 700
|||||| ||||||||||| ||||||||||||| | || ||||| ||||||||||||||||
Sbjct 455 GGATCAACAAATTTAAGGAATTAGTGAGGAAACTCTCTAATTACGAAGTGATTTACATCG 514
Query 701 ACGAAGAAGACGAAACGCATTGTTTCGGCAGCGTCATTGTCGGTCTCAATCGCCACCGTG 760
|||||||||||||||||||||||||| ||||||||| |||||||||| |||||||||||
Sbjct 515 ACGAAGAAGACGAAACGCATTGTTTCAGCAGCGTCACCGTCGGTCTCACTCGCCACCGTG 574
Query 761 ATTATGACAAAGAACTAACGATCGATCTTTCGAATTCGGAGTGTTCCATGTCCGATTTCC 820
| ||| |||||| | |||||||||| |||||||||||||| ||| |||||||||||||
Sbjct 575 AGTATTTCAAAGAGTTGACGATCGATCCTTCGAATTCGGAGTATTCAATGTCCGATTTCC 634
Query 821 GGAAATATCTCAGAGACGCATACTCGTTGAGAAACGCCGCCGT-G-T-C--TAC-G-T-- 871
||| | ||| |||||| | |||||||||||||||| |||||| | | | || | |
Sbjct 635 GGAGTTTTCTAAGAGACACCTACTCGTTGAGAAACGACGCCGTGGCTACGAGACAGATCC 694
Query 872 ---GGCGGAGGCCACGGCTTCTAATTTTGTCGAGGA-GCATATCGCGAGCGTTTGTGAAC 927
|||||||||||||| |||| |||||| | | || ||| |||||||||||| || |||
Sbjct 695 GGCGGCGGAGGCCACGGATTCTGATTTTGGCTA-GAGGCAGATCGCGAGCGTTCGTAAAC 753
Query 928 GCTGATGAAATCGCTAGAGCGGCGAGACAGATGGGATTCAATGTCGTGGTGGTGGAAGCA 987
| | |||||||| ||||||||||||||||| |||||||| |||||||||| ||||||
Sbjct 754 ACCGGCGAAATCGCGAGAGCGGCGAGACAGATCGGATTCAAAGTCGTGGTGGCGGAAGCG 813
Query 988 AACACCGAAATTGCGAGTTTCGCACAAACTGTGAATTCCTGTGACGTGATGCTTGGCGTT 1047
|||| || ||| |||| ||||| ||||| ||||||||||| ||||||||||| ||||||
Sbjct 814 AACATCGGAATCGCGAAATTCGCGCAAACGGTGAATTCCTGCGACGTGATGCTCGGCGTT 873
Query 1048 CACGGCGCGGGACTGACGAACATGGTGTTCTTACCAGAGAACGCGGTCGTGATTCAGATT 1107
||||||||||| |||||||||||||||||||| || ||||||||||| ||||||||| ||
Sbjct 874 CACGGCGCGGGGCTGACGAACATGGTGTTCTTGCCGGAGAACGCGGTGGTGATTCAGGTT 933
Query 1108 CTTCCGATCGGTGGATTCGAGTGGCTTGCGAACACGGATTTCGAGGATCCGTCGAAGGGA 1167
|||||||||||||||||||||||||||||||| |||||||| ||| | || ||| |||||
Sbjct 934 CTTCCGATCGGTGGATTCGAGTGGCTTGCGAAAACGGATTTTGAGAAACCTTCGGAGGGA 993
Query 1168 ATGAATCTGAGGTATTTGGAGTATAAGATCGCGGCGGAGGAGAGTACGCTGGCGAAGCAG 1227
|||||||||||||| |||||||| |||||||||| ||||||||| ||||||| |||| ||
Sbjct 994 ATGAATCTGAGGTACTTGGAGTACAAGATCGCGGTGGAGGAGAGCACGCTGGTGAAGAAG 1053
Query 1228 TACGGACGTGATCACGAGATCGTTAGAGATCCATCGGCGGTTGCAAAACGCGGGTGGGGA 1287
|||||||| || ||||| ||||| ||||||||||||||||||||||||| |||||||| |
Sbjct 1054 TACGGACGCGACCACGAAATCGTGAGAGATCCATCGGCGGTTGCAAAACACGGGTGGGAA 1113
Query 1288 ACGTTCAAGTCGGTTTATTTGGTACAGCAGAACGTGAGCGTTGATATAAACCGGTTCAAG 1347
| |||||| ||||||||||||||||| ||||||||||| ||||||||||||||||||||
Sbjct 1114 ATGTTCAAATCGGTTTATTTGGTACAACAGAACGTGAGTATTGATATAAACCGGTTCAAG 1173
Query 1348 CCGGTTCTTGTCAAAGCTCTTGAGTTATT 1376
|||||||||||||||||||||||||||||
Sbjct 1174 CCGGTTCTTGTCAAAGCTCTTGAGTTATT 1202
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 68724546105
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5