BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg479327
Length=4339
Score E
Sequences producing significant alignments: (Bits) Value
AT3G18290.1 | Symbols: EMB2454, BTS | zinc finger protein-relat... 7131 0.0
> AT3G18290.1 | Symbols: EMB2454, BTS | zinc finger protein-related
| chr3:6273995-6280510 FORWARD LENGTH=4414
Length=4414
Score = 7131 bits (3861), Expect = 0.0
Identities = 4215/4379 (96%), Gaps = 51/4379 (1%)
Strand=Plus/Plus
Query 1 TTTCCAGATAAACATTAATAAAACGATaaaaaggc-aaaaa-aaaaaagaaaagaaagca 58
||||||||||||||||||||||||||| ||||||| ||||| ||||||||||||||||||
Sbjct 20 TTTCCAGATAAACATTAATAAAACGAT-AAAAGGCAAAAAATAAAAAAGAAAAGAAAGCA 78
Query 59 aaagcaaaatcaaaaTCGATATATCAGACAACGCCTCGA-C---CTTTC------T--TT 106
||||||||||||||||||||||||||||||||||||||| | ||||| | ||
Sbjct 79 AAAGCAAAATCAAAATCGATATATCAGACAACGCCTCGACCTTTCTTTCTTTTTTTCCTT 138
Query 107 CTCATCGTCTCCGTTGAACAACA-C-CAC--ACA-C-GAAGAAAACCAGATAATTCCCAT 160
||||||||||||||||||||||| | ||| ||| | |||||| ||||||||||||||||
Sbjct 139 CTCATCGTCTCCGTTGAACAACACCACACAAACACCAGAAGAACACCAGATAATTCCCAT 198
Query 161 GGTGAACCGAGCTCAGATTTGAAAATTGAAGGTCGTAGACGAATCACAAGGATATAGAGA 220
|||||||||||||||||||||||||||||||||||||||||||||| ||||| | |||||
Sbjct 199 GGTGAACCGAGCTCAGATTTGAAAATTGAAGGTCGTAGACGAATCATAAGGAAAGAGAGA 258
Query 221 AGTGCTGTGAGATTTC-TTTTTCACGGACGAAAACGGAGATAAGCTTCGGGGGAAATGGC 279
|||| | ||||||||| ||||| |||||||||||||||||||||||| ||||||||||||
Sbjct 259 AGTGGTTTGAGATTTCTTTTTTGACGGACGAAAACGGAGATAAGCTTTGGGGGAAATGGC 318
Query 280 GACGCCGTTACCAGATTTTGAGACGGCGAGAGGCGGCGGAGGAGTGGCGTCTTCTTCAAC 339
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 319 GACGCCGTTACCAGATTTTGAGACGGCGAGAGGCGGCGGAGCAGTGGCGTCTTCTTCAAC 378
Query 340 CACGGTGCTTACGAGTTCTGTGTC-TC--CCTCTTCTTCCTCTCGTCCGTTGCCTGTGGC 396
|||||| ||| ||||||||||||| || | |||||||| ||||||||||||||||||||
Sbjct 379 CACGGTTCTTCCGAGTTCTGTGTCTTCTTCTTCTTCTTCATCTCGTCCGTTGCCTGTGGC 438
Query 397 GAATTCGTTCTCGGAAGACGCGGAAGAGATTTCTCCGATCCTGATTTTCTTGTTCTTTCA 456
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 439 GAATTCGTTCTCGGATGACGCGGAAGAGATTTCTCCGATCCTGATTTTCTTGTTCTTTCA 498
Query 457 TAAGGCAGTATGTAGTGAGCTTGAAGCTCTTCATAGATTGGCGCTGGAGTTTGCTACTGG 516
|||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||
Sbjct 499 TAAGGCAGTATGTAGTGAGCTTGAAGCTCTTCATAGATTGGCTCTTGAGTTTGCTACTGG 558
Query 517 TCACCATGTCGATCTCCGGCTGCTTCGTGAACGGTACCGGTTCTTGAGATCCATCTATAA 576
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 559 TCACCATGTCGATCTCCGGCTGCTTCGTGAACGGTACCGGTTCTTGAGATCCATCTATAA 618
Query 577 GCATCACTGCAATGCCGAAGACGAGGTGATATTTTCAGCTCTTGACATACGTGTGAAGAA 636
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 619 GCATCACTGCAATGCCGAAGACGAGGTGATATTTTCAGCTCTTGACATACGTGTGAAGAA 678
Query 637 TGTAGCGCAAACATATTCTCTTGAACACAAGGGGGAAAGCAATCTTTTCGATCATCTCTT 696
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 679 TGTAGCGCAAACATATTCTCTTGAACACAAGGGGGAAAGCAATCTTTTCGATCATCTCTT 738
Query 697 TGAGCTGCTGAATTCTGCCACGGAAACTGATGAAAGTTACCAAAGGGAGTTGGCTCGTTC 756
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 739 TGAGCTGCTGAATTCTGCCACGGAAACTGATGAAAGTTACCGAAGGGAGTTGGCTCGTTC 798
Query 757 TACTGGAGCACTTCAGACTTCTGTTAGCCAGCACTTGGCAAAAGAACAGAAGCAGGTGTT 816
||| ||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||
Sbjct 799 TACCGGAGCACTTCAGACTTCTGTTAGCCAGCACTTGGCGAAAGAACAGAAACAGGTGTT 858
Query 817 CCCCTTACTTATTGAGAAATTCAAGTATGAGGAGCAAGCTTACATAGTCTGGCGGTTTCT 876
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 859 CCCCTTACTTATTGAGAAATTCAAGTATGAGGAGCAAGCTTACATAGTCTGGCGGTTTCT 918
Query 877 CTGCAGTATTCCTGTGAATATGCTTGCTGTGTTCCTGCCATGGATTTCTTCCTCCATTTC 936
|||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||
Sbjct 919 CTGCAGTATTCCTGTGAATATGCTTGCTGTGTTCTTGCCATGGATTTCTTCTTCCATTTC 978
Query 937 AGTAGATGAAAGCAAGGAGATGCAAACGTGCTTAAAGAAGATAGTTCCAGGCGAGAAGCT 996
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 979 AGTAGATGAAAGCAAGGAGATGCAAACGTGCTTAAAGAAGATAGTTCCAGGCGAGAAGCT 1038
Query 997 CCTTCAGCAGGTTATTTTCACCTGGTTGGGAGGGAAAAGCAATACTGTGGCTTCGTGTCG 1056
||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||
Sbjct 1039 CCTTCAGCAGGTTATTTTCACCTGGCTGGGAGGGAAAAGCAATACCGTGGCTTCGTGTCG 1098
Query 1057 CATTGAAGATTCTATGTTCCAGTGCTGTCTAGATTCTTCTAGCAGCATGCTTCCTTGTAA 1116
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1099 CATTGAAGATTCTATGTTCCAGTGCTGTCTAGATTCTTCTAGCAGCATGCTTCCTTGTAA 1158
Query 1117 AGCAAGTAGAGAACAGTGCGCATGTGAGGGGTCCAAGATTGGGAAGAGAAAGTACCCAGA 1176
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1159 AGCAAGTAGAGAACAGTGCGCATGTGAGGGTTCCAAGATTGGGAAGAGAAAGTACCCAGA 1218
Query 1177 GCTTACTAAGTTTGGTTCATCTGATACTCAGATGCACCCAGTTGATGAGATAAAGCTCTG 1236
||||||||| ||||| ||||||||||||| ||||||||||||||||||||||||||||
Sbjct 1219 GCTTACTAACTTTGGCTCATCTGATACTC---TGCACCCAGTTGATGAGATAAAGCTCTG 1275
Query 1237 GCACAAGTCAATCAACAAGGAGATGAAAGAAATAGCCGATGAGGCTAGGAAGATCCAGCT 1296
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1276 GCACAAGTCAATCAACAAGGAGATGAAAGAAATAGCCGATGAGGCTAGGAAGATTCAGCT 1335
Query 1297 ATCTGGAGATTTTTCGGATTTATCTGCATTTGATGAACGCTTACAATATATTGCTGAAGT 1356
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1336 GTCTGGAGATTTTTCGGATTTATCGGCATTTGATGAACGCTTACAATATATTGCTGAAGT 1395
Query 1357 GTGCATCTTCCACAGTCTTGCAGAGGACAAGATCATATTTCCAGCAGTAGATGGGGAGTT 1416
|||||||||||| |||||||||||||||||||||||||||||||| |||||||| |||||
Sbjct 1396 GTGCATCTTCCATAGTCTTGCAGAGGACAAGATCATATTTCCAGCTGTAGATGGAGAGTT 1455
Query 1417 TTCATTTTCTGAGGAGCACAATGAAGAAGAAAATCAGTTTAACGAGTTTCGATGCTTAAT 1476
|||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1456 TTCATTTTCTGAAGAGCACGATGAAGAAGAAAATCAGTTTAACGAGTTTCGATGCTTAAT 1515
Query 1477 TGAAAATATCAAGAGTGCTGGAGCCTCTTCTACTTCTGCTGCTGAATTTTACACCAAGTT 1536
|||||||||||||||||||||||||||||||||||| ||||| ||||||||||| ||| |
Sbjct 1516 TGAAAATATCAAGAGTGCTGGAGCCTCTTCTACTTCCGCTGCCGAATTTTACACTAAGCT 1575
Query 1537 GTGCTCACATGCTGATCAAATAATGGAAACTATTCAAAGACACTTCCACAACGAGGAAAT 1596
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 1576 GTGCTCACATGCTGATCAAATAATGGAAACTATTCAAAGACACTTCCATAACGAGGAAAT 1635
Query 1597 TCAGGTGCTACCCCTTGCACGAAAGAACTTCAGCTTTAAAAAACAACAAGAACTTCTCTA 1656
|||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||
Sbjct 1636 TCAGGTGCTACCCCTTGCACGAAAGAACTTCAGCTTCAAAAGACAACAAGAACTTCTCTA 1695
Query 1657 CCAAAGCCTGTGTATAATGCCATTGAGACTAATTGAACGAGTTTTGCCATGGTTGACGGC 1716
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1696 CCAAAGCCTGTGTATAATGCCATTGAGACTAATTGAACGAGTTTTGCCATGGTTGACGGC 1755
Query 1717 ATCTTTAACAGAAGATGAAGCTAAGAATTTTCTGAAGAACTTGCAAGCTGGAGCACCTAA 1776
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1756 ATCTTTAACAGAAGATGAAGCTAAGAATTTTCTGAAGAACTTGCAAGCTGGAGCACCTAA 1815
Query 1777 ATCAGATGTTGCTCTCATTACTCTTTTCTCTGGTTGGGCATGCAAAGGACGCAAAGCCGG 1836
||| |||||||||||| |||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1816 ATCGGATGTTGCTCTCGTTACTCTTTTCTCTGGTTGGGCTTGCAAAGGACGCAAAGCCGG 1875
Query 1837 GGAATGCTTGTCTCCAAACGGGAATGGTTTATGCCCTGTTAAAACACTAAGCAACATTAA 1896
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1876 GGAATGCTTGTCTCCAAACGGGAATGGTTTATGCCCTGTGAAAACACTAAGCAACATTAA 1935
Query 1897 AGAAGTCAACCTTCAGTCATGTAATACTTGTGCGTCTGTTCCATGCACGAGTAGGAGTAC 1956
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1936 AGAAGTCAACCTTCAGTCATGTAATGCTTGTGCGTCTGTTCCATGCACGAGTAGGAGTAC 1995
Query 1957 AGAATCGTGTTGCCAGCATCAAGATAAAAGGCCAGCTAAGCGAACTGCTGTATTGTCTTG 2016
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1996 AAAATCGTGTTGCCAGCATCAAGATAAAAGGCCAGCTAAGCGAACTGCTGTATTGTCTTG 2055
Query 2017 TGaaaaaaaaaCCACCACGCACTCGTCAGAAGTTGCAAATGGGTGCAAGCCATCTGGAAA 2076
|||||||||||||||| | |||||| ||||||||||||||||||||||||||||||||||
Sbjct 2056 TGAAAAAAAAACCACCCCTCACTCGACAGAAGTTGCAAATGGGTGCAAGCCATCTGGAAA 2115
Query 2077 TGGTAGGTCATGCTGTGTTCCGGATCTCGGAGTTAACAATAATTGTCTGGAACTTGGTTC 2136
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2116 TGGTAGGTCATGCTGTGTTCCGGATCTCGGAGTTAACAATAATTGTCTGGAACTTGGTTC 2175
Query 2137 TCTTCCAGCAGCTAAAGCTATGAGATCTTCTTCGCTAAACTCTGCTGCACCCGCTCTTAA 2196
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2176 TCTTCCAGCAGCTAAAGCTATGAGATCTTCTTCGCTAAACTCTGCTGCACCCGCTCTTAA 2235
Query 2197 TTCCAGCCTCTTTATTTGGGAAATGGATAGTAACAGCTTTGTTACTGGACATGCCGAGCG 2256
||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||
Sbjct 2236 TTCCAGCCTCTTTATTTGGGAAATGGATAGTAACAGCTTTGGTACTGGACATGCTGAGCG 2295
Query 2257 GCCAGTTGCTACAATATTCAAGTTTCACAAGGCCATAAGCAAAGATCTAGAGTTTCTTGA 2316
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2296 GCCAGTTGCTACAATATTCAAGTTTCACAAGGCCATAAGCAAAGATCTAGAGTTTCTTGA 2355
Query 2317 TGTTGAATCTAGAAAGCTCATTGATTGCGATGGGACATTTATTCGTCAATTTATCGGTCG 2376
|||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 2356 TGTTGAATCTGGAAAGCTCATTGATTGCGATGGAACATTTATTCGTCAATTTATCGGTCG 2415
Query 2377 ATTTCACCTACTCTGGGGTTTCTACAAGGCTCATAGTAATGCAGAAGATGACATCCTATT 2436
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2416 ATTTCACCTACTCTGGGGTTTCTACAAGGCTCATAGTAATGCAGAAGATGACATCCTATT 2475
Query 2437 TCCAGCTCTGGAATCGAAGGAGACGCTTCACAATGTCAGTCACTCTTACACGCTCGACCA 2496
||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 2476 TCCAGCTCTAGAATCGAAGGAGACACTTCACAATGTCAGTCACTCTTACACGCTCGACCA 2535
Query 2497 TAAACAGGAGGAGAAGTTGTTTGGTGATATTTATAGTGTCCTTACTGAACTTTCAATTCT 2556
|||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||
Sbjct 2536 TAAACAGGAGGAGAAGTTGTTTGGAGATATTTATAGTGTCCTTACCGAACTTTCAATTCT 2595
Query 2557 TCATGAGAAGTTACAGAGTGATTCTGTGATGGGGGACATAGCTCAGACTGACACTGTTCA 2616
||||||||||||||||||||||||| |||||| |||||||||||| |||||||||||||
Sbjct 2596 TCATGAGAAGTTACAGAGTGATTCTATGATGGAGGACATAGCTCAAACTGACACTGTTCG 2655
Query 2617 GACTGATATCGATAACAGTGACTGCAAGAAGAAGTACAATGAACTGGCTACAAAGCTACA 2676
||| |||||||||||| |||||||||| ||||| ||||||||||||||||||||||||||
Sbjct 2656 GACGGATATCGATAACGGTGACTGCAACAAGAAATACAATGAACTGGCTACAAAGCTACA 2715
Query 2677 AGGGATGTGCAAATCCATTAAAATCACTTTGGATCAGCATATTTTCTTGGAGGAACTGGA 2736
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 2716 GGGGATGTGCAAATCCATTAAAATCACTTTGGATCAGCACATTTTCTTGGAGGAACTGGA 2775
Query 2737 GCTATGGCCTCTATTTGACAAACACTTCTCCATTCAGGAGCAAGACAAGATTGTGGGTCG 2796
||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 2776 GCTTTGGCCTCTATTTGACAAACACTTCTCCATTCAAGAGCAAGACAAGATTGTGGGTCG 2835
Query 2797 TATAATCGGAACAACGGGTGCTGAAGTTCTCCAATCTATGTTACCATGGGTGACGTCTGC 2856
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 2836 TATAATCGGAACAACGGGTGCTGAAGTTCTTCAATCTATGTTACCATGGGTGACGTCTGC 2895
Query 2857 CCTTTCTGAAGATGAGCAAAACAGAATGATGGATACCTGGAAGCAGGCAACCAAGAACAC 2916
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2896 CCTTTCTGAAGATGAGCAAAACAGAATGATGGATACCTGGAAGCAGGCAACCAAGAACAC 2955
Query 2917 AATGTTTGATGAATGGCTTAATGAATGCTGGAAAGGATCACCTGACTCATCCTCAACAGA 2976
|||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 2956 AATGTTCGATGAATGGCTTAATGAATGCTGGAAAGGATCACCCGACTCATCCTCAACAGA 3015
Query 2977 AACATCCAAACCTAGTTCACAGAAAGATAATGATCATCAAGAAATCTTGGACCAAACTGG 3036
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||
Sbjct 3016 AACATCCAAACCTAGTCCACAGAAAGATAATGATCATCAAGAAATCTTGGACCAAAGTGG 3075
Query 3037 TGAACTATTTAAGCCGGGGTGGAAAGATATTTTCCGCATGAATCAGAACGAACTAGAGGC 3096
||||||||||||||| |||||||||||||||||||||||||| ||||| |||||||||||
Sbjct 3076 TGAACTATTTAAGCCAGGGTGGAAAGATATTTTCCGCATGAACCAGAATGAACTAGAGGC 3135
Query 3097 TGAAATCAGGAAGGTTTATCAGGACTCAACACTTGATCCGAGGAGAAAAGATTATCTCGT 3156
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3136 TGAAATCAGGAAGGTCTATCAGGACTCAACACTTGATCCGAGGAGAAAAGATTATCTCGT 3195
Query 3157 ACAAAATTGGAGGACCAGTCGATGGATTGCGGCTCAGCAAAAGTTACCAAAGGAAACAGA 3216
||| |||||||||||||||||||||||||||||||||||||||||||| |||||| ||||
Sbjct 3196 ACAGAATTGGAGGACCAGTCGATGGATTGCGGCTCAGCAAAAGTTACCTAAGGAAGCAGA 3255
Query 3217 AACTGCATTAAATGGTGAAGTTGAACTTGGATGTTCCCCGTCTTTTCGAGATCCCGAGAA 3276
||||||| |||||||||| ||||||||||||||||||||||||||||| |||||||||||
Sbjct 3256 AACTGCAGTAAATGGTGATGTTGAACTTGGATGTTCCCCGTCTTTTCGGGATCCCGAGAA 3315
Query 3277 ACAGATATATGGATGCGAGCATTACAAGCGTAACTGCAAGCTTCGAGCTGCTTGTTGTGA 3336
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3316 GCAGATATATGGATGCGAGCATTACAAGCGTAACTGCAAGCTTCGAGCTGCTTGTTGTGA 3375
Query 3337 TCAGTTGTTCACTTGTAGGTTTTGCCATGACAAAGTAAGCGACCACTCCATGGATAGAAA 3396
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3376 TCAGTTGTTCACTTGTAGGTTTTGCCATGACAAAGTAAGCGACCACTCCATGGATAGAAA 3435
Query 3397 ATTGGTGACGGAAATGCTCTGTATGCGGTGCCTCAAGGTGCAACCTGTTGGTCCCATCTG 3456
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3436 ATTGGTGACGGAAATGCTCTGTATGCGGTGCCTCAAGGTGCAACCTGTTGGTCCCATCTG 3495
Query 3457 CACAACACCTTCATGCGACGGATTCCCAATGGCAAAGCACTATTGCAGTATTTGCAAACT 3516
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3496 CACAACACCTTCATGCGACGGATTCCCAATGGCAAAGCACTATTGCAGTATTTGCAAACT 3555
Query 3517 TTTTGATGATGAAAGGGCTGTTTACCACTGTCCATTCTGCAACCTTTGCCGGGTCGGGGA 3576
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 3556 TTTTGATGATGAAAGGGCCGTTTACCACTGTCCATTCTGCAACCTTTGCCGGGTCGGGGA 3615
Query 3577 AGGACTAGGAATCGATTTTTTCCATTGCATGACATGTAACTGTTGCCTGGGGATGAAACT 3636
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
Sbjct 3616 AGGACTAGGAATCGATTTTTTCCATTGCATGACATGTAACTGTTGCCTAGGGATGAAATT 3675
Query 3637 AGTAAACCACAAGTGCCTCGAGAAGAGCCTCGAGACAAATTGTCCCATTTGCTGCGAATT 3696
|||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||
Sbjct 3676 AGTAAACCACAAGTGCCTCGAGAAGAGCCTCGAGACAAATTGCCCCATCTGCTGCGAATT 3735
Query 3697 TCTTTTCACATCGAGTGAAGCAGTTAGAGCCTTACCATGTGGTCACTACATGCACTCAGC 3756
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3736 TCTTTTCACATCGAGTGAAGCAGTTAGAGCCTTACCATGTGGTCACTACATGCACTCAGC 3795
Query 3757 TTGCTTCCAGGCTTACACTTGCAGCCACTACACATGTCCAATCTGTGGAAAATCATTAGG 3816
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 3796 TTGCTTCCAGGCTTACACTTGCAGTCACTACACATGTCCAATCTGTGGAAAATCATTAGG 3855
Query 3817 AGATATGGCTGTTTATTTCGGTATGCTTGATGCACTGTTAGCTGCAGAAGAACTTCCAGA 3876
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 3856 AGATATGGCTGTTTATTTTGGTATGCTTGATGCACTGTTAGCTGCAGAAGAACTTCCAGA 3915
Query 3877 GGAATATAAAAATCGCTGTCAGGACATTCTATGTAATGATTGTGAACGCAAAGGAACTAC 3936
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3916 GGAATACAAAAATCGCTGTCAGGACATTCTATGTAATGATTGTGAACGCAAAGGAACTAC 3975
Query 3937 ACGGTTCCATTGGTTGTACCATAAATGCGGGAGCTGTGGTTCTTACAATACCCGTGTGAT 3996
||||||||||||||||||||||||||| || ||||||||||||||||||||||| |||||
Sbjct 3976 ACGGTTCCATTGGTTGTACCATAAATGTGGTAGCTGTGGTTCTTACAATACCCGGGTGAT 4035
Query 3997 CAAGTCCGAAACAAcccccccAGACTGCTCAACCTCATCCTGAAAACACTAAGAGGTTTC 4056
|||||||||||||| |||||| ||||||||||||||||||||||||||| ||||||||||
Sbjct 4036 CAAGTCCGAAACAATCCCCCCGGACTGCTCAACCTCATCCTGAAAACACCAAGAGGTTTC 4095
Query 4057 ACTCACTTTTTACTCTC-------Cttt--ttttt--GGGTTTTACTTTCTGTTTAGCAC 4105
|||||||| |||||||| |||| ||||| ||||||||| ||||||| ||||
Sbjct 4096 ACTCACTTGTTACTCTCTTTTTTTCTTTCCTTTTTTCGGGTTTTACCCTCTGTTTCGCAC 4155
Query 4106 AACAATTTGAAGAAGCCCGTTGGTAGATTTTTATTT-GTATAGTCTCTGAGATATTAAGA 4164
|||||| ||||||||||||||| ||||||||| ||| |||||||||||||||||||||||
Sbjct 4156 AACAATGTGAAGAAGCCCGTTGATAGATTTTTTTTTTGTATAGTCTCTGAGATATTAAGA 4215
Query 4165 TTTTGAAGAGTCTTTATTTAGGTTACCTTTCCTTACTATACATTTTGGCTTGGACAAAGC 4224
||||||||||||||||||||||||||||| |||||||||||||||||| |||||||
Sbjct 4216 TTTTGAAGAGTCTTTATTTAGGTTACCTT-----ACTATACATTTTGGCTTGAACAAAGC 4270
Query 4225 CAAAAA-T--CGTTTGTTTCTGGAACATCCCATACCATT-TCGTCCTTCTCTTCCTCATA 4280
|||||| | |||||||||||||||||||||||||| | || || || |||||| ||||
Sbjct 4271 CAAAAAATTTCGTTTGTTTCTGGAACATCCCATACCGTCATCCTC-TT-TCTTCCACATA 4328
Query 4281 ATCCGCTATTTGTTTTTGCATTAAGCTGAGACTTTTTCTTTGAAGAGTGTAAATAGTTA 4339
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4329 ATCCGCTATTTGTTTTTGCATTAAGCTGAGACTTTTTCTTTGAAGAGTGTAAATAGTTA 4387
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 216319858216
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5