BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg479349 Length=575 Score E Sequences producing significant alignments: (Bits) Value AT3G18470.1 | Symbols: | PLAC8 family protein | chr3:6334822-6... 717 0.0 > AT3G18470.1 | Symbols: | PLAC8 family protein | chr3:6334822-6335822 REVERSE LENGTH=704 Length=704 Score = 717 bits (388), Expect = 0.0 Identities = 458/492 (93%), Gaps = 4/492 (1%) Strand=Plus/Plus Query 25 CTACTTTACAATGGAAAAGCAATGGACTTCTGGTCTTTTCAGCTGCATGGAAGACAGCGA 84 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 115 CTACTTTACAATGGAAAAGCAATGGACTTCTGGTCTTTTCAGCTGCATGGAAGACAGTGA 174 Query 85 AAATGCTTGCCTCACATGTTTCTGCCCGTGCGTCACTTTCGGACGGATCGCGAATATTGC 144 || |||||||||||||||||||||||| |||||||||||||||||||||||| | ||| | Sbjct 175 AACTGCTTGCCTCACATGTTTCTGCCCATGCGTCACTTTCGGACGGATCGCGGACATTTC 234 Query 145 CGATGAAGGAAGGACAGGTTGTGGGAGTTGTGGGGTTTTTTACGGGCTGATATGTTTTGT 204 ||| ||||||||||| ||||||||||| |||||||| ||||||||||| ||||||| ||| Sbjct 235 CGACGAAGGAAGGACCGGTTGTGGGAGATGTGGGGTATTTTACGGGCTAATATGTTGTGT 294 Query 205 GGTCGGCTTGCCTTGCTTGTTCTCATGTACTTACCGGACCAAGATCCGAAGCAAATTTGG 264 ||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| || Sbjct 295 GGTCGGCTTACCTTGCTTGTTCTCATGCACTTACCGGACCAAGATCCGAAGCAAATTCGG 354 Query 265 GTTACCGGAGTCTCCAGCTTCGGATTGCCTCACTCACTGCTTTTGTGAATGTTGTGCTCT 324 |||||||||||||||| ||||||||||| ||||||||| ||||||||||||||||||||| Sbjct 355 GTTACCGGAGTCTCCAACTTCGGATTGCGTCACTCACTTCTTTTGTGAATGTTGTGCTCT 414 Query 325 TTGCCAAGAATACCGTGAACTCAAAACCCGTGGTCTTGACCCCTCTCTTGGATGGAATGG 384 |||||||||| ||||||||||||||||||||||||||||||||||| |||| |||| ||| Sbjct 415 TTGCCAAGAACACCGTGAACTCAAAACCCGTGGTCTTGACCCCTCTATTGGGTGGAGTGG 474 Query 385 AAACATGCAACGGACGATGGCTCCTCCTATGAGTCAGCAGATGATGGGTTGATTTAA-AA 443 ||| |||||||||||||||||||||||||||||||||||||||||||||||||| || || Sbjct 475 AAATATGCAACGGACGATGGCTCCTCCTATGAGTCAGCAGATGATGGGTTGATT-AAGAA 533 Query 444 GATAAATGATTTTCAATATGATTTAAATTAAACTAGG-GGTTCACAAAAACAGCACTTTT 502 ||| |||||| ||||||||||| ||||||| || | ||||||| |||||||||||||| Sbjct 534 GATTTCTGATTTGCAATATGATTTGAATTAAA-TAAGTGGTTCACGAAAACAGCACTTTT 592 Query 503 AAGTGTAGtttt 514 |||||||||||| Sbjct 593 AAGTGTAGTTTT 604 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 27628780850 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5