BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg479364

Length=567
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  AT3G18590.1 | Symbols: ENODL5, AtENODL5 | early nodulin-like pr...   915    0.0  


> AT3G18590.1 | Symbols: ENODL5, AtENODL5 | early nodulin-like 
protein 5 | chr3:6398670-6399337 FORWARD LENGTH=567
Length=567

 Score =  915 bits (495),  Expect = 0.0
 Identities = 544/568 (96%), Gaps = 2/568 (0%)
 Strand=Plus/Plus

Query  1    ATGGATTCATCGAAGAAGATCATTCTCGTTACGTTTATTGTATCATTTTACATGTTTTCA  60
            ||||||||||| |||||||||||| |||||| |||| ||||| |||||||||||||||||
Sbjct  1    ATGGATTCATCAAAGAAGATCATTATCGTTATGTTTCTTGTAACATTTTACATGTTTTCA  60

Query  61   TGTGTATCAAGCACTGAATTTGAAGTTGGAGGAGAAGATGGTTGGATCGTACCAAAGTCT  120
            ||||| |||||||||||||||||||||||||||||| ||||||||||||||||||| |||
Sbjct  61   TGTGTTTCAAGCACTGAATTTGAAGTTGGAGGAGAAAATGGTTGGATCGTACCAAAATCT  120

Query  121  AAGACTCTTGGAGATGCGTTTAACCAATGGGCTTCAGATAACCGGTTTAAAGTTGGCGAC  180
            |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||
Sbjct  121  AAGACTCTTGGAGATGCGTTTAACCAATGGGCGTCAGATAACCGGTTTAAAGTTGGTGAC  180

Query  181  ACTCTCCGTTTCAAGTACACGAAAGACTCAGTGTTAGTGGTGTCAGAAGAAGAGTACAAG  240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  181  ACTCTCCGTTTCAAGTACACGAAAGACTCAGTGTTAGTGGTGTCAGAAGAAGAGTACAAG  240

Query  241  AAATGCAAAGCGACCAAACCGCAACTCTACTCAAACAACGAAGACACTGTTTTCAAACTA  300
            |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct  241  AAATGCAAAGCGACCAAACCACAACTCTACTCAAACAACGAAGACACTGTTTTCAAACTA  300

Query  301  GACCGACCCGGTTTGTTTTACTTCATCAGCGGTGTCTCTGGCCACTGCGAAAAGGGTCAG  360
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  301  GACCGACCCGGTTTGTTTTACTTCATCAGCGGTGTCTCTGGCCACTGCGAAAAGGGTCAG  360

Query  361  AAGATGATCGTAAAAGTTATGGAGACTGAGTCTTCCACAGAGTCTCCTCCTCcttcatct  420
            |||||||||||||||||||||||||| |||||||| ||||||||||||||||| || |||
Sbjct  361  AAGATGATCGTAAAAGTTATGGAGACGGAGTCTTCTACAGAGTCTCCTCCTCCATCCTCT  420

Query  421  tcatcttcatcttcgtcatcatcatctcttcCGGCTTCAACTCCCAAGGCCAAGAAGAGC  480
            || ||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct  421  TCTTCTTCTTCTTCGTCATCATCATCTCTTCCGGCGTCAACTCCCAAGGCCAAGAAGAGC  480

Query  481  AATGCCTACAAAACCGCGGTCCagttcagtagttccggttttgttgtctttgccgttctt  540
            ||||||| ||||||||| ||||||||||||||||||||||||||||||| ||| ||||| 
Sbjct  481  AATGCCTTCAAAACCGCAGTCCAGTTCAGTAGTTCCGGTTTTGTTGTCTCTGCTGTTCT-  539

Query  541  g-ttgtttcagtttttggtttggtttAG  567
            | ||||||||||||||||||||||||||
Sbjct  540  GATTGTTTCAGTTTTTGGTTTGGTTTAG  567



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 27226907674


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5