BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg479420
Length=3046
Score E
Sequences producing significant alignments: (Bits) Value
AT3G19020.1 | Symbols: | Leucine-rich repeat (LRR) family prot... 2656 0.0
> AT3G19020.1 | Symbols: | Leucine-rich repeat (LRR) family protein
| chr3:6558973-6562119 REVERSE LENGTH=3147
Length=3147
Score = 2656 bits (1438), Expect = 0.0
Identities = 1707/1830 (93%), Gaps = 46/1830 (3%)
Strand=Plus/Plus
Query 1 TCATTATAGGCTTTCTCTCCACAACATTCATCTATTAAGCAAGCCATAGAGCCATTTCCA 60
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 TCATTATAGGCTTCCTCTCCACAACATTCATCTATTAAGCAAGCCATAGAGCCATTTCCA 60
Query 61 AGGTTTTTCATCACCATGACCCGAAGAACAATGGAGAAGCCTTTTGGCTGCTTCCTTCTC 120
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 61 AGTTTTTTCATCACCATGACCCGAAGAACAATGGAGAAGCCTTTTGGCTGCTTCCTTCTC 120
Query 121 CTCGtttt-tttCACCATCTCCATTTTCTTCTACTCCGCAGCAGCTCTCACCGATGAGGA 179
||| |||| |||||||||||||||||| ||||| |||||||| |||||||||||||||||
Sbjct 121 CTC-TTTTGTTTCACCATCTCCATTTTTTTCTATTCCGCAGCGGCTCTCACCGATGAGGA 179
Query 180 AGCTTCGTTTCTCACAAGACGCCAACTTTTGGCATTATCAGAAAACGGAGATCTTCCTGA 239
|||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 180 AGCTTCTTTTCTTACAAGACGCCAACTTTTGGCATTATCAGAAAACGGAGATCTTCCCGA 239
Query 240 CGACATGGAGTATGAAGTCGATTTAGACCTCAAATTTGCTAATAACCGACTCAAAAGGGC 299
|||||| ||||| ||||||||||||||||||||||||||||||||| |||| ||||||||
Sbjct 240 CGACATCGAGTACGAAGTCGATTTAGACCTCAAATTTGCTAATAACAGACTTAAAAGGGC 299
Query 300 TTACATTGCCCTTCAAGCTTGGAAAAAGGCATTCTACTCCGATCCGTTCAACACTGCGGC 359
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 300 TTACATTGCCCTTCAAGCTTGGAAAAAGGCATTCTACTCTGATCCGTTCAACACTGCGGC 359
Query 360 TAATTGGGTTGGTCCAGACGTGTGTTCTTACAAAGGAGTTTTCTGTGCACCAGCACTTGA 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 360 TAATTGGGTTGGTCCAGACGTGTGTTCTTACAAAGGAGTTTTCTGTGCACCAGCACTTGA 419
Query 420 CGACCCAAGCGTATTGGTTGTGGCGGGTATTGACCTTAACCATGCGGATATAGCCGGATA 479
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 420 CGACCCAAGCGTATTGGTTGTGGCGGGGATTGACCTTAACCATGCGGATATAGCCGGATA 479
Query 480 CTTGCCACCTGAGCTAGGTTTATTGACAGATGTCGCCTTGTTTCACATTAACTCCAACAG 539
|||||| |||||||||||||||||||| |||||||||||||||||| |||| ||||||||
Sbjct 480 CTTGCCGCCTGAGCTAGGTTTATTGACCGATGTCGCCTTGTTTCACGTTAATTCCAACAG 539
Query 540 GTTTTGCGGAGTTATTCCGAAAAGTCTTTCAAAGCTAACGTTAATGTACGAATTCGACGT 599
|||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||
Sbjct 540 GTTTTGCGGAGTTATTCCGAAAAGTCTTTCGAAGCTAACGTTAATGTATGAATTCGACGT 599
Query 600 GAGCAATAACCGGTTCGTTGGTCCGTTTCCGACAGTTGCTCTTTCTTGGCCGTCTTTGAA 659
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 600 CAGCAATAACCGTTTCGTTGGTCCGTTTCCGACAGTTGCTCTTTCTTGGCCGTCTTTGAA 659
Query 660 GTTCCTTGACATAAGATACAATGATTTTGAAGGGAAATTGCCACCAGAGATCTTTGATAA 719
|||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||
Sbjct 660 ATTCCTTGACATAAGATACAATGATTTTGAAGGGAAACTACCACCAGAGATCTTTGATAA 719
Query 720 AGATCTTGACGCCATCTTCTTGAACAACAATAGATTCGAGTCGACCATCCCCGAGACAAT 779
|||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 720 AGATCTCGACGCCATCTTCTTGAACAACAATAGATTTGAGTCGACCATCCCCGAGACAAT 779
Query 780 TGGTAAATCAACTGCTTCCGTCGTGACCTTCGCACACAATAAATTCAGCGGTTGCATCCC 839
|||||||||||| |||||||| || |||||||||||||||||||| ||||||||||||||
Sbjct 780 TGGTAAATCAACAGCTTCCGTTGTAACCTTCGCACACAATAAATTTAGCGGTTGCATCCC 839
Query 840 AAAAACCATTGGCCAGATGAAGAACCTCAACGAGATTGTTTTTATTGGGAACAACCTAAG 899
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 840 AAAAACCATTGGCCAGATGAAGAACCTCAACGAGATTGTGTTTATTGGGAACAACCTAAG 899
Query 900 TGGTTGCTTACCGAACGAAATCGGTTCGTTGAACAATGTGACTGTGTTTGATGCTAGCAG 959
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 900 TGGTTGCTTACCGAACGAAATCGGTTCGTTGAACAATGTGACTGTGTTTGATGCTAGCAG 959
Query 960 CAATGGGTTCGTCGGAAGTTTACCATCGACCTTGTCGGGCTTAGCCAACGTGGAACAAAT 1019
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 960 CAATGGGTTCGTCGGAAGTTTGCCATCGACCTTGTCGGGCTTAGCCAACGTGGAACAAAT 1019
Query 1020 GGATTTCTCGTACAATAAGTTCACCGGATTTGTCACAGACAATATCTGCAAGTTGCCCAA 1079
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1020 GGATTTCTCGTACAATAAGTTCACCGGATTTGTCACAGACAATATCTGCAAGTTGCCCAA 1079
Query 1080 ATTGTCGAACTTCACATTTTCTTACAATTTCTTCAATGGAGAAGCTCAAAGTTGTGTGCC 1139
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1080 ATTGTCAAACTTCACATTTTCTTACAATTTCTTCAATGGAGAAGCTCAAAGTTGTGTGCC 1139
Query 1140 TGGGTCGATCCAAGAGAAACAATTTGATGACACGAGCAATTGCTTACAGAATAGACCAAA 1199
||| |||| |||||||||||| ||||||||||||||||||||||||||||| ||||||||
Sbjct 1140 TGGATCGAGCCAAGAGAAACAGTTTGATGACACGAGCAATTGCTTACAGAACAGACCAAA 1199
Query 1200 TCAAAAGTCGGCTAAAGAATGTTTGCCGGTGGTAAGCCGTCCTGTGGATTGCAGTAAAGA 1259
|| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 1200 CCAGAAGTCGGCTAAAGAATGTTTGCCGGTGGTTAGCCGTCCTGTGGATTGCAGTAAAGA 1259
Query 1260 CAAGTGTGCTGGTGGTGATGGAGGTGGCGGTGGTTCAAACCCATCACCAAAACCAACGCC 1319
||||||||| ||||| | || ||||||||||||||||||||||||||||||||| ||
Sbjct 1260 CAAGTGTGCCGGTGG--A-GG---TGGCGGTGGTTCAAACCCATCACCAAAACCAACACC 1313
Query 1320 AA-A-----GGCACCGGAGCCTAAGAAAGAAATTAACCCACCAAAATTAGAAGAGCCATC 1373
|| | |||||||||||||||||||||||| ||||||||||| ||||||||||||||
Sbjct 1314 AACACCAAAGGCACCGGAGCCTAAGAAAGAAATAAACCCACCAAACTTAGAAGAGCCATC 1373
Query 1374 TAAGCCAAAACCAGAAGAATCTCCCAAACCACAACAGCCTAGTCCAAAGCCTGAGACACC 1433
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1374 TAAGCCAAAACCAGAAGAATCTCCCAAACCACAACAGCCTAGTCCAAAGCCTGAGACACC 1433
Query 1434 ATCACATGAGCCTTCCAACCCAAAGGAACCTATGCCAGAGTCACCAAAACAGGAATCTCC 1493
||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1434 ATCACATGAGCCTTCTAACCCAAAGGAACCTAAGCCAGAGTCACCAAAACAGGAATCTCC 1493
Query 1494 AAAACCGGAACAACCAAAACCTAAGCCTGAGTCACCAAAACAAGAGTCGCCTAAGCAAGA 1553
|||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1494 AAAAACGGAACAGCCAAAACCTAAGCCTGAGTCACCAAAACAAGAGTCGCCTAAGCAAGA 1553
Query 1554 G-CAACCAAAACCAGAACAGCCAAAACCCAAGCCTGAGTCACCAAAACAAGAGTC-TCCT 1611
| || ||||||||||||||||||||||| |||||||||||||||||||||||||| || |
Sbjct 1554 GGCA-CCAAAACCAGAACAGCCAAAACCTAAGCCTGAGTCACCAAAACAAGAGTCGTC-T 1611
Query 1612 AAGCAAGAGCCACCAAAACCC-AAG---C-C-TGAGTC--A-CC---AAAAC-A-AG-AG 1656
|||||||||||||||||||| ||| | | | | | | || ||||| | || ||
Sbjct 1612 AAGCAAGAGCCACCAAAACCAGAAGAATCTCCTAAACCGGAACCTCCAAAACCAGAGGAG 1671
Query 1657 TCGCCTAAGCAAGAGCCACCAAAACCAGAAAAATCTCCTAAACCGGA--AC-CTCCTAAA 1713
|| ||||||| | |||||||| | ||| | | | | ||||| || | | |||||
Sbjct 1672 TCACCTAAGCCTCAACCACCAAAGCAAGAGACA-C-CA-AAACCAGAGGAGTCACCTAAG 1728
Query 1714 CCAGAGACG-CCAAAACCAGAGATGCCAAAACCAGAGGAGTCACCTGAGCCTCAACCACC 1772
|| | || ||||| | ||||| ||||||||||||||||||||| |||||||||||||
Sbjct 1729 CCTCA-ACCACCAAAGCAAGAGACACCAAAACCAGAGGAGTCACCTAAGCCTCAACCACC 1787
Query 1773 AAAGCAAGAACAACCACCAAAGAC-AGAGG 1801
||||||||| | || ||||| || |||||
Sbjct 1788 AAAGCAAGAG-A-CC-CCAAA-ACCAGAGG 1813
Score = 1206 bits (653), Expect = 0.0
Identities = 1074/1264 (85%), Gaps = 81/1264 (6%)
Strand=Plus/Plus
Query 1470 AGAGTCACCAAAACAGGAATCTCCAAAACCGGAACAACCAAAACCTAAGCCTGAGTCACC 1529
|||||| || || || || | |||||||| ||||| |||||||||||||||||||||||
Sbjct 1536 AGAGTCGCCTAAGCAAGAGGCACCAAAACCAGAACAGCCAAAACCTAAGCCTGAGTCACC 1595
Query 1530 AAAACAAGAGTCGCCTAAGCAAGAGCAACCAAAACCAGAACAGCCAAAAC-CC-AAGCCT 1587
||||||||||||| |||||||||||| ||||||||||| | || || | || || ||
Sbjct 1596 AAAACAAGAGTCGTCTAAGCAAGAGCCACCAAAACCAG-A-AG---AATCTCCTAAACCG 1650
Query 1588 GAGTCACCAAAA-CA-A-GAGTCTCCTAAGCAAGAGCCACCAAAACCCAAGCCTGAGTCA 1644
|| | |||||| || | ||||| ||||||| | ||||| ||| ||| ||| ||
Sbjct 1651 GAACCTCCAAAACCAGAGGAGTCACCTAAGCCTCAACCACC-AAA-GCAA----GAGACA 1704
Query 1645 CCAAAA-CA-A-GAGTCGCCTAAGCAAGAGCCACCAAAACCAGAAAAATCTCCTAAACC- 1700
|||||| || | ||||| ||||||| | ||||| ||| || | | | | || |||||
Sbjct 1705 CCAAAACCAGAGGAGTCACCTAAGCCTCAACCACC-AAAGCA-AGAGA-CACCAAAACCA 1761
Query 1701 --GGAACCTCCTAAACCAGAGA-CGCCAAAACCAGAGATGCCAAAACCAGAGGAGTCACC 1757
||| | ||||| || | | | ||||| | ||||| ||||||||||||||||||||
Sbjct 1762 GAGGAGTCACCTAAGCCTCA-ACCACCAAAGCAAGAGACCCCAAAACCAGAGGAGTCACC 1820
Query 1758 TGAGCCTCAACCACCAAAGCAAGAACAACCACCAAAGACAGAGGCACCAAAAATGGGGTC 1817
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1821 TAAGCCTCAACCACCAAAGCAAGAACAACCACCAAAGACAGAGGCACCAAAAATGGGGTC 1880
Query 1818 GCCTCCATTGGAATCACCGGTACCAAATGATCCTTACGATGCATCTCCGATTAAAAAACG 1877
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1881 GCCTCCATTGGAATCACCGGTACCAAATGATCCTTACGATGCATCTCCGATTAAAAAACG 1940
Query 1878 TCGTCCTCAACCACCGTCACCATCAACAGAAGAGACAAAGACACCGTCGCCACAATCTCC 1937
||||||||||||||| ||||| || |||||||||||||||||| ||||||||||||||||
Sbjct 1941 TCGTCCTCAACCACCATCACCCTCGACAGAAGAGACAAAGACAACGTCGCCACAATCTCC 2000
Query 1938 AT-CAGTACACTCT------CCACCACCACCGGTTCATTCCCCACCGCCACCTGTATTTT 1990
| ||||||||||| ||||||||||||||||||||||||||||| ||||||||||
Sbjct 2001 -TCCAGTACACTCTCCACCACCACCACCACCGGTTCATTCCCCACCGCCGCCTGTATTTT 2059
Query 1991 CACCTCCTCCTCCGGTGCATTctcctccaccaccggtttactcgccaccacctcca-tcc 2049
|||||||||||||| |||||||||||||||||||||||||||| |||||||||||| | |
Sbjct 2060 CACCTCCTCCTCCGATGCATTCTCCTCCACCACCGGTTTACTCACCACCACCTCCAGTAC 2119
Query 2050 actctcct---cctccaccggtacactctcctcctccaccggtttactcgccaccacctc 2106
|||||||| || ||||| || ||||||||||| ||||| || | || |||||||| |
Sbjct 2120 ACTCTCCTCCACCACCACCAGTCCACTCTCCTCCACCACCAGTACATTCACCACCACCAC 2179
Query 2107 ctgtatactctccgccaccaccaccagtccactctccgcctccaccagtccactctcctc 2166
| || | | | | || || ||||| ||||| || || || |||||||||||||||||||
Sbjct 2180 CAGTCCA-T-T-CTCCTCCTCCACCGGTCCATTCACCACCACCACCAGTCCACTCTCCTC 2236
Query 2167 ctccaccggtacactctcctcctccaccggtccactctccaccaccaccaccagttttct 2226
||||||| || ||||||||||||||||||||||| || || |||||||||||||||||||
Sbjct 2237 CTCCACCAGTCCACTCTCCTCCTCCACCGGTCCAGTCACCTCCACCACCACCAGTTTTCT 2296
Query 2227 ctccaccaccgcctgcaccaatctactctcctcctccaccaccagtccactccccgcctc 2286
|||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||
Sbjct 2297 CTCCACCACCGCCTGCACCAATCTACTCACCTCCTCCTCCACCAGTCCACTCCCCGCCTC 2356
Query 2287 cacccgtgcactctccaccaccgccaccagtccactcaccgcctcctcctgttcactcac 2346
|||| || |||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 2357 CACCGGTCCACTCTCCACCACCGCCACCAGTCCACTCACCACCTCCTCCTGTTCACTCAC 2416
Query 2347 cgcctcctccagtacactctccaccacctccagttcattct---------cca--cca-- 2393
||||||||||||| ||||| || || |||||||| |||||| ||| |||
Sbjct 2417 CGCCTCCTCCAGTTCACTCCCCGCCGCCTCCAGTCCATTCTCCACCACCACCAGTCCACT 2476
Query 2394 --ccacca-----gt---c---c-actctccaccacctcc--ttttctcaccgccaccaA 2437
|||||| || | | ||||||| || ||||| |||||||||||||||| |
Sbjct 2477 CTCCACCACCTCCGTCACCTATCTACTCTCCTCCTCCTCCAGTTTTCTCACCGCCACCGA 2536
Query 2438 AACCTGTAACGCCTCTATCACCGGCAACAACACCAACGGCAAACGCTCCAACACC-T--T 2494
||||||||||||||||| |||| |||||| | |||| |||||||||||||||||| | |
Sbjct 2537 AACCTGTAACGCCTCTACCACCAGCAACATCGCCAATGGCAAACGCTCCAACACCTTCAT 2596
Query 2495 CATCAGAATCAGGAGAAATCTCATCACCGGTTCAAGCTCCGACCCCAGACTCTGAGGACA 2554
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 2597 CATCAGAATCAGGAGAAATCTCAACACCGGTTCAAGCTCCGACCCCAGACTCTGAGGACA 2656
Query 2555 TCGAAGCACCATCAGAATCAAATCATTCACCAGTGTTCAAATCAAGTCCTGCTCCATCAC 2614
|||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||
Sbjct 2657 TCGAAGCACCATCAGATTCAAATCATTCACCAGTGTTCAAATCAAGTCCAGCTCCATCAC 2716
Query 2615 CAGATTCCGAGCCA-AA-TC-ACTCCCCGGCT-CCAGTTTC-CGAACCAGAAGTTGAAGC 2669
|||||||||||||| || | | | || | | ||| | ||||||||||||||||||
Sbjct 2717 CAGATTCCGAGCCAGAAGTTGAAGCACCAG-TACCA-TCAAGCGAACCAGAAGTTGAAGC 2774
Query 2670 ACCA 2673
||||
Sbjct 2775 ACCA 2778
Score = 608 bits (329), Expect = 9e-173
Identities = 387/413 (94%), Gaps = 12/413 (3%)
Strand=Plus/Plus
Query 2644 CCAGTTTCCGAACCAGAAGTTGAAGCACCAGTTCCATCAAGCGAACCAGAAGTTGAAGCA 2703
|||| |||||| |||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 2716 CCAGATTCCGAGCCAGAAGTTGAAGCACCAGTACCATCAAGCGAACCAGAAGTTGAAGCA 2775
Query 2704 CCAGAACAATCAGCAGCCACACCC-TCGTCACCGA-CGCCATCTTCAAATCCATCACCAG 2761
||| ||||||||| |||||| ||| |||||| | | ||||||||||||||||||||||||
Sbjct 2776 CCAAAACAATCAGAAGCCAC-CCCTTCGTCATC-ACCGCCATCTTCAAATCCATCACCAG 2833
Query 2762 ATGTAACTGCACCACCATCGGAAGACAACGACGGCGGCGATAATTTCATCCTCCCACCAA 2821
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 2834 ATGTAACTGCACCACCATCGGAAGACAACGACGACGGCGATAATTTCATCCTCCCACCAA 2893
Query 2822 ACATTGGACACCAATATGCATCGCCACCACCACCGATGTTCCCAGGCTACTGAACCAAAC 2881
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 2894 ACATTGGACACCAATATGCATCGCCACCACCACCGATGTTCCCAGGCTACTGAACCATAC 2953
Query 2882 ATTTTTAATATTT-ACATTTTGGTCCAAAATTTTTCCGGTTAACCCAATTTGTAACAAG- 2939
||||||||||||| |||||||||||||| ||||||||||||||| |||||||||||||
Sbjct 2954 ATTTTTAATATTTTACATTTTGGTCCAACATTTTTCCGGTTAACGCAATTTGTAACAAAC 3013
Query 2940 aaaaaaa----TACATTTATAATTTGACCATT-GTAATCTGTAAGTAGATGATTTTTAGA 2994
||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 3014 AAAAAAAAAGATACATTTATAATTTGACCATTTGTAATCTGTAAGTAGATGATTTTTAGA 3073
Query 2995 AGTGAATATTTTCAAA-TTAACCGTTAACATATCTGTAACTCTATGTTTTATA 3046
|||||||||||||||| |||||| ||||||||||||||| |||| ||||||||
Sbjct 3074 AGTGAATATTTTCAAAATTAACCATTAACATATCTGTAATTCTAAGTTTTATA 3126
Score = 126 bits (68), Expect = 1e-27
Identities = 162/206 (79%), Gaps = 11/206 (5%)
Strand=Plus/Plus
Query 1577 AACCCAAGCCTGAGTCACCAAAACAAGAGTCTCCTAAGCAA--GAGCCA-CCAAAACCCA 1633
|||| ||||| |||||||||||||| || ||||| || || || || |||||||| |
Sbjct 1460 AACCTAAGCCAGAGTCACCAAAACAGGAATCTCC-AA-AAACGGA-ACAGCCAAAACCTA 1516
Query 1634 AGCCTGAGTCACCAAAACAAGAGTCGCCTAAGCAAGAGCCACCAAAACCAGAA-A---AA 1689
|||||||||||||||||||||||||||||||||||||| |||||||||||||| | ||
Sbjct 1517 AGCCTGAGTCACCAAAACAAGAGTCGCCTAAGCAAGAGGCACCAAAACCAGAACAGCCAA 1576
Query 1690 TCTCCTAAACCGGAACCTCCTAAACCAGAGACGCCAAAACCAGAGATGCCAAAACCAGAG 1749
||||| || || | || |||| |||| || | || | |||| |||||||||||
Sbjct 1577 AA-CCTAAGCCTGAGTCACCAAAACAAGAGTCGTCTAAGCAAGAGCCACCAAAACCAGAA 1635
Query 1750 GAGTCACCTGAGCCTCAACCACCAAA 1775
|| || ||| | || |||| |||||
Sbjct 1636 GAATCTCCTAAACCGGAACCTCCAAA 1661
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 151454000917
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5