BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg479487
Length=3361
Score E
Sequences producing significant alignments: (Bits) Value
AT3G19700.1 | Symbols: IKU2 | Leucine-rich repeat protein kinas... 4193 0.0
AT3G19710.1 | Symbols: BCAT4 | branched-chain aminotransferase4... 248 2e-64
> AT3G19700.1 | Symbols: IKU2 | Leucine-rich repeat protein kinase
family protein | chr3:6843662-6847275 FORWARD LENGTH=3460
Length=3460
Score = 4193 bits (2270), Expect = 0.0
Identities = 2836/3105 (91%), Gaps = 56/3105 (2%)
Strand=Plus/Plus
Query 4 ATGTTCCGGCGATTATTTATCGTTCGCCTTCTCTTTTTAATTCCACTGGCTTCATCCAGA 63
||| |||||| | |||||||||||||||||||||||||||| ||||| |||||||| |||
Sbjct 1 ATGCTCCGGCTACTATTTATCGTTCGCCTTCTCTTTTTAATGCCACTAGCTTCATCGAGA 60
Query 64 TCCAACCATAGTCAAGAAGTAGATACTCTTCTCAAACTGAAATCCACCTTTGGAGAAACA 123
|||||||| ||| ||||||| || | ||||||||||||||||||||||||||||||||||
Sbjct 61 TCCAACCACAGTGAAGAAGTCGAGAATCTTCTCAAACTGAAATCCACCTTTGGAGAAACA 120
Query 124 ATATCCGGCGACGTCTTCAAGACCTGGACTCACCGGAACTCGGCATGCGAATTCTCCGGA 183
| ||||| ||||||||| |||||||||||||||||||| |||||||| |||||| |||||
Sbjct 121 AAATCCGACGACGTCTTTAAGACCTGGACTCACCGGAATTCGGCATGTGAATTCGCCGGA 180
Query 184 ATCGTATGCAATTCCGACGGAAACGTCACCGAGATCAATCTTGGAAGTCAGAGTTTGATC 243
|||||||| |||||||||||||||||| ||||||||| |||||||||| ||||||||||
Sbjct 181 ATCGTATGTAATTCCGACGGAAACGTCGTCGAGATCAACCTTGGAAGTCGGAGTTTGATC 240
Query 244 AATTGCGACGGCGACGGTAAAATT-ACAGATCTTCCTTTCGATTTAATCTGTGATTTGAA 302
|| | |||| ||||||| | || || |||||||||||||||| |||||| ||||||||
Sbjct 241 AACCGAGACGACGACGGT-AGGTTCACCGATCTTCCTTTCGATTCAATCTGCGATTTGAA 299
Query 303 GTTTTTGGAGAAGCTTGTTCTAGGAAACAACTCCTTGA-GCGGCCGGATTAGTAAGAATC 361
||| ||||||||||||||||||||||||||| ||| | | || | |||| ||| |||||
Sbjct 300 GTTGCTGGAGAAGCTTGTTCTAGGAAACAACT-CTTTACGTGGTCAGATTGGTACGAATC 358
Query 362 TCAGGG-AATGTAATCACCTGAGATACTTAGACCTCGGCACCAACAATTTCTCTGGTGAG 420
|| ||| ||||||||| | ||||||||||||||||||| | |||||||||||| ||||||
Sbjct 359 TC-GGGAAATGTAATCGCTTGAGATACTTAGACCTCGGGATCAACAATTTCTCCGGTGAG 417
Query 421 TTTCCGGCGATTGATTCATTACGATTGCTCAAGTTTTTGAGCTTAAACGGTTCTGGAATC 480
||||||||||||||||| |||| ||| ||| |||||||||||||||||| ||||||||||
Sbjct 418 TTTCCGGCGATTGATTCGTTACAATTACTCGAGTTTTTGAGCTTAAACGCTTCTGGAATC 477
Query 481 TCTGGAATATTCCCATGGAGTTCTCTAAAAAACCTCAAGA-GATTAAGTTTCTTAAGTGT 539
|||||||||||||||||||||||||||||| |||| || | |||| |||||| |||| ||
Sbjct 478 TCTGGAATATTCCCATGGAGTTCTCTAAAAGACCTGAA-ACGATTGAGTTTCCTAAGCGT 536
Query 540 TGGAGATAACCGATTC-GATCTGCATCCATTTCCTAAAGAGATTCTAAATCTCACTGCCT 598
|||||||||||||||| | || |||||||||||||| |||||||||||||||||||||||
Sbjct 537 TGGAGATAACCGATTCGGTTC-GCATCCATTTCCTAGAGAGATTCTAAATCTCACTGCCT 595
Query 599 TGAAAAGGGTTTTTCTGAGTAATAGCAGCATCACCGGTAAGATTCCAGAGGGAATCAAGA 658
|| || |||||| ||||||||| ||||||||||| ||||||||||||||||||||||| |
Sbjct 596 TGCAATGGGTTTATCTGAGTAACAGCAGCATCACTGGTAAGATTCCAGAGGGAATCAAAA 655
Query 659 ACCTTGTTCGTCTACAAAACCTT-GAGCTCTCTGATAATGAAATCTCTGGTGAAATTCCA 717
||||||||||||||||||| ||| ||||||||||||||| | ||||||||||||||||||
Sbjct 656 ACCTTGTTCGTCTACAAAA-CTTGGAGCTCTCTGATAATCAGATCTCTGGTGAAATTCCA 714
Query 718 AAGGGGATAGTTCATCTCAGAAACCTAAGGCAGCTTGAGATTTACAACAATTACTTGACT 777
|||| ||| ||||| |||| |||||||||||||||||||||||| | ||| |||||||
Sbjct 715 AAGGAGATTGTTCAGCTCAAAAACCTAAGGCAGCTTGAGATTTATAGTAATGACTTGACC 774
Query 778 GGTAAGTTACCATTCGGG-TTTCGGAATTTGACGAATTTGTGGAATTTCGACGCCTCTAA 836
|||||||||||||| ||| ||| |||||||||||||| || |||||||||||||||||||
Sbjct 775 GGTAAGTTACCATT-GGGTTTTAGGAATTTGACGAATCTGAGGAATTTCGACGCCTCTAA 833
Query 837 CAACTCCTTAGAAGGTGATTTGTCAGAGCTGAGGTTCTTAAAGAATCTTGTTTCTCTTGG 896
||||||||| ||||||||||| ||||||||| ||||||||||||||||||| ||||||||
Sbjct 834 CAACTCCTTGGAAGGTGATTTATCAGAGCTGCGGTTCTTAAAGAATCTTGTGTCTCTTGG 893
Query 897 ATTGTTCGAAAACCTATTGACCGGTGAGATTCCAAAAGAGTTTGGAGATTTCAAGAGTTT 956
| |||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 894 AATGTTCGAAAACCGATTAACCGGTGAGATTCCAAAAGAGTTTGGAGATTTCAAGAGTTT 953
Query 957 AGCTGCTTTGTCTCTTTACAGAAACCAACTTACTGGGAAGCTTCCGAACAGACTCGGATC 1016
||||||||||||||||||||||||||| || || ||||||||||||| |||||||| ||
Sbjct 954 AGCTGCTTTGTCTCTTTACAGAAACCAGCTCACAGGGAAGCTTCCGAGGAGACTCGGTTC 1013
Query 1017 TTGGACCGGTTTT-AGATACATCGACGTGTCTGAGAACTTCTTGGAAGGTCAGATTCCTC 1075
|||||| | |||| || |||||||||||||||||||||||||||||||||||||||||||
Sbjct 1014 TTGGACAGCTTTTAAG-TACATCGACGTGTCTGAGAACTTCTTGGAAGGTCAGATTCCTC 1072
Query 1076 CTGATATGTGCAAGAAAGGCGCAATGACGCATCTTCTGATGTTGCAGAACAGATTCATAG 1135
|| |||||||||||||||||| ||||||||||||||| ||||||||||||||||||| ||
Sbjct 1073 CTTATATGTGCAAGAAAGGCGTAATGACGCATCTTCTCATGTTGCAGAACAGATTCACAG 1132
Query 1136 GACAATTTCCAGAGAGCTATGCTAAATGCAAGACTCTGATTCGTCTTCGTGTGAGTAACA 1195
|||||||||||||||| ||||||||||| ||||||||||||||||||||||| |||||||
Sbjct 1133 GACAATTTCCAGAGAGTTATGCTAAATGTAAGACTCTGATTCGTCTTCGTGTAAGTAACA 1192
Query 1196 ACTTTCTCTCTGGTGTGATTCCTTCAGGGATTTGGGGGCTTCCTAATCTCCAGTTTCTTG 1255
||| ||||||||| |||||||||||||||||||||| ||||||||||| ||||||||||
Sbjct 1193 ACTCTCTCTCTGGAATGATTCCTTCAGGGATTTGGGGTCTTCCTAATCTACAGTTTCTTG 1252
Query 1256 ATCTTGCTTCAAACCGTTTTGAAGGAAACCTCACTGATGATATTGGCAATGCCAAGTCTC 1315
| |||||||||||| |||||||||||||||||||| ||||||||| |||||||||||||
Sbjct 1253 ACCTTGCTTCAAACTATTTTGAAGGAAACCTCACTGGTGATATTGGTAATGCCAAGTCTC 1312
Query 1316 TTGGCTCTTTGGATTTAAGCAACAATCGATTTTCAGGTTCTCTACCGTTTCAGATCTCAG 1375
| || ||||| ||||| ||||| ||| |||||||||||||||||||||||||||||||||
Sbjct 1313 TAGGTTCTTTAGATTTGAGCAATAATAGATTTTCAGGTTCTCTACCGTTTCAGATCTCAG 1372
Query 1376 GAGCTAACTCGTTAGTGTCGGTTAATCTTCGCATGAATAAGTTCTCCGGGATAGTTTCTG 1435
||||||||||||||||||||||||||||||| ||||||||||| |||||||||||| |||
Sbjct 1373 GAGCTAACTCGTTAGTGTCGGTTAATCTTCGAATGAATAAGTTTTCCGGGATAGTTCCTG 1432
Query 1436 ACTCTTTTGGTAAGCTTAAGGAGCTTTCAAGTCTCTA-TCTTGATCAGAATAATCTATCA 1494
| ||||||||||||||||||||||||||||||||| | |||||| ||||||||||||||
Sbjct 1433 AATCTTTTGGTAAGCTTAAGGAGCTTTCAAGTCTC-ATTCTTGACCAGAATAATCTATCT 1491
Query 1495 GGTGCTATACCAAAGTCACTAGGCTTATGCACATTTTTGG-TGTTTCTAAACCTTGCTGG 1553
|||||||||||||||||||||||||||||||||| ||||| || ||||||| |||||||
Sbjct 1492 GGTGCTATACCAAAGTCACTAGGCTTATGCACATCTTTGGTTG-ATCTAAACTTTGCTGG 1550
Query 1554 AAACTCACTCTCTGAAGAAATCCCGGAAAGTTTAGGATCTTTACAGTTATTGAATTCTCT 1613
||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||| ||
Sbjct 1551 AAACTCACTCTCTGAGGAAATCCCGGAAAGTTTAGGATCTTTAAAGTTATTGAATTCCCT 1610
Query 1614 GAATCTGTCAGGAAACAAACTGTCAGGAATGATTCCTGTTGGTTTATCGGCTCTGAAGCT 1673
||||||||||||||||||| | ||||||||||||||||||||||| ||||||||||||||
Sbjct 1611 GAATCTGTCAGGAAACAAATTATCAGGAATGATTCCTGTTGGTTTGTCGGCTCTGAAGCT 1670
Query 1674 AAGCTTACTTGACTTATCCAACAACCAGCTAACTGGTTCTGTTCCTGAATCTCTCGAAAG 1733
||||||||||||||||||||||||||| | || |||||||||||||||||||||| |||
Sbjct 1671 AAGCTTACTTGACTTATCCAACAACCAATTGACCGGTTCTGTTCCTGAATCTCTCGTAAG 1730
Query 1734 TGGAAACTTTGAAGGAAATTCAGGGCTATGCAGCTCAAAGATC-GCATATCTTCATCCAT 1792
||||| |||||||||||||||||| |||||||||||||||||| | |||||||| |||||
Sbjct 1731 TGGAAGCTTTGAAGGAAATTCAGGACTATGCAGCTCAAAGATCAG-ATATCTTCGTCCAT 1789
Query 1793 GTCCGCTTGGAAAACCTCGCAGCCAAGGGAAGAGGAAA-AGTTTTTC-TAAGTTCAACAT 1850
|||||||||||||||||| ||||||||||||||||||| | ||| || ||| || ||||
Sbjct 1790 GTCCGCTTGGAAAACCTCACAGCCAAGGGAAGAGGAAACA-TTTGTCAAAAG-TCGACAT 1847
Query 1851 TTGTTTAATCGTTGCAGCGGTACTTGCTCTGTTTTTATTATTCAGTTACGTGATCTTCAA 1910
||||| || ||||||||| |||||||||||||||| |||||||||||||||||||| ||
Sbjct 1848 GTGTTTCATTGTTGCAGCGATACTTGCTCTGTTTTTCTTATTCAGTTACGTGATCTTTAA 1907
Query 1911 GATAAGACGGGATAGGTCGAATCAAACGGCT-CAGAAGAAGAACAATTGGCAAGTGAGCT 1969
||||||||| |||| || |||| |||||| | |||||||||||| | |||||||||||||
Sbjct 1908 GATAAGACGAGATAAGTTGAATAAAACGG-TGCAGAAGAAGAACGACTGGCAAGTGAGCT 1966
Query 1970 CTTTTCGGTTACTTAACTTTAACGAAATGGAAATTATTGATGAGATCAAGTCAGAGAATC 2029
|||| |||||||| |||||||| |||||||||||||||||||||||||| |||||||||
Sbjct 1967 CTTTCCGGTTACTAAACTTTAATGAAATGGAAATTATTGATGAGATCAAATCAGAGAATA 2026
Query 2030 TCATAGGCAGAGGCGGTCAAGGGAATGTTTACAAAGTAACTCTAAGAAGCGGTGAAACAC 2089
||||||||||||| ||||| ||||||||||||||||||| ||||||||||||||||||||
Sbjct 2027 TCATAGGCAGAGGAGGTCAGGGGAATGTTTACAAAGTAAGTCTAAGAAGCGGTGAAACAC 2086
Query 2090 TAGCCGTTAAACACATCTGGTGTCAGTGTCAGGATAG-TCCCTGCGAAAGCTTTAGAAGC 2148
||||||||||||| |||||||||| | ||| || |||| ||||||||||||||||
Sbjct 2087 TAGCCGTTAAACATATCTGGTGTC-----C-GGAGAGTTCCC-ACGAAAGCTTTAGAAGC 2139
Query 2149 TCGACGGCAATGTTAAGTGACGGCAACAACAGAAGTAAGAGCCGG-GAATTTGAGGCAGA 2207
|| ||||||||||||||||||||||| ||||||||||| | ||| ||||| ||||||||
Sbjct 2140 TCAACGGCAATGTTAAGTGACGGCAATAACAGAAGTAATA-ACGGAGAATTCGAGGCAGA 2198
Query 2208 AGTCGGGACGCTAAGCAATTTAAAACATATAAACGTTGTGAAGTTGTTCTGCAGCATAAC 2267
||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 2199 AGTCGCGACGCTAAGCAATATAAAACATATAAACGTTGTGAAGTTGTTCTGCAGCATAAC 2258
Query 2268 GTGTGAGGATAGTATGCTGCTTGTATATGATTATATGCCTAATGGAAGCTTGTGGGAGCA 2327
||||||||| |||| ||||||||| ||||| |||||||||||||||||||||||||||||
Sbjct 2259 GTGTGAGGACAGTAAGCTGCTTGTCTATGAGTATATGCCTAATGGAAGCTTGTGGGAGCA 2318
Query 2328 GCTGCATGAGCGTCGTGGTGAGCAAGAGATTGGGTGGCGTGTGAGACAAGCATTAGCTTT 2387
||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||
Sbjct 2319 GCTGCATGAGCGTCGTGGTGAGCAAGAAATTGGGTGGCGTGTGAGACAAGCGTTAGCTTT 2378
Query 2388 AGGAGTTGCTAAAGGGCTGGAGTAT-TTGCACCATGGGTTAGATCGGCCGGTGATACATC 2446
||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||||
Sbjct 2379 AGGAGCTGCTAAAGGGCTGGAGTATCTT-CACCATGGGTTAGATCGGCCGGTGATACATC 2437
Query 2447 GGGACGTGAAGTCCAGCAATATATTGCTTGATGAGGAGTGGAGACCGAGGATTGCTGATT 2506
| ||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||
Sbjct 2438 GAGACGTGAAGTCCAGCAATATATTGCTTGATGAGGAATGGAGACCAAGGATTGCTGATT 2497
Query 2507 TTGGATTGGCTAAAATCATTCAGCCTGATTGGGTTCAACGAGATTCCTCGGCTCCTCTTG 2566
||||||||||||||||||||||| |||||| |||||||||||||| ||||||||||||||
Sbjct 2498 TTGGATTGGCTAAAATCATTCAGGCTGATTCGGTTCAACGAGATTTCTCGGCTCCTCTTG 2557
Query 2567 TTGAAGGAACTCTTGGTTACATTGCCCCCGAATACGCGTATACCACCAAAGTGAACGAGA 2626
| ||||||||||||||||||||||||||||||| || ||||| ||||||||||||||||
Sbjct 2558 TCAAAGGAACTCTTGGTTACATTGCCCCCGAATATGCATATACTACCAAAGTGAACGAGA 2617
Query 2627 AGAGTGATGTGTACAGCTTCGGGGTGGTGTTAATGGAGTTGGTAACAGGGAAGAAGCCGG 2686
|||| || ||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 2618 AGAGCGACGTGTACAGCTTCGGGGTGGTGTTAATGGAGTTGGTGACAGGGAAGAAGCCGT 2677
Query 2687 TGGAGACAGAGTTCGGCGAGAACAGTGACATAGTCATGTGGGTTTGGAGCATAAGCAAGG 2746
| |||||||| ||||||||||||| ||||||||||||||||||||||||| | |||||||
Sbjct 2678 TAGAGACAGATTTCGGCGAGAACAATGACATAGTCATGTGGGTTTGGAGCGTGAGCAAGG 2737
Query 2747 AGATGAACAGAGAAATGATGATGGAATTAGTCGATCCGAGTATAGAAGATGAATACAAGG 2806
||| ||||||||||||||||||| ||||| ||||| |||| |||||||||||||||||||
Sbjct 2738 AGACGAACAGAGAAATGATGATGAAATTAATCGATACGAGCATAGAAGATGAATACAAGG 2797
Query 2807 AGGATGCTCTTAAAGTTTTGACCATTGCTTTATTATGCACGGACAAGTCTCCTCAGGCTA 2866
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2798 AGGATGCTCTTAAAGTTTTGACCATTGCTTTATTATGCACGGACAAGTCTCCTCAGGCTA 2857
Query 2867 GACCGTTTATGAAATCAGTGGTTAGTATGCTAGAGAAAATAGAGCCTTCCTA---CAAGA 2923
||||||||||||||||||| |||||||||||||| ||||||||||||||||| |||||
Sbjct 2858 GACCGTTTATGAAATCAGTAGTTAGTATGCTAGAAAAAATAGAGCCTTCCTATAACAAGA 2917
Query 2924 ACAATGGAGAAGCAAGTTACGATGAGAGTGCTAATGATGAGATTGCTAAAGTTGTATAAC 2983
||| ||||||||||||||||| |||||||||||||||||||||| |||||||||||||||
Sbjct 2918 ACAGTGGAGAAGCAAGTTACGGTGAGAGTGCTAATGATGAGATTACTAAAGTTGTATAAC 2977
Query 2984 TCATA--TT--A-TT----A--A-TCGAGCTAAGGCTCAAGAATATTAAATTCTTGATTG 3031
||||| || | || | | ||||||||||||||||||||| ||||||||||||||
Sbjct 2978 TCATAGATTGCACTTGGTTATTAATCGAGCTAAGGCTCAAGAATAATAAATTCTTGATTG 3037
Query 3032 GTTTTATAATTATACAAAATTCTTAAGAGAAAGATTCTACGACCA 3076
|||||||| ||| | ||||||||| |||||||||||||| |||||
Sbjct 3038 GTTTTATACTTAAA-AAAATTCTTCAGAGAAAGATTCTAAGACCA 3081
Score = 248 bits (134), Expect = 2e-64
Identities = 231/275 (84%), Gaps = 17/275 (6%)
Strand=Plus/Plus
Query 3099 aaaaaaaagcaaaaaGATGAAGC--AAA-CCGTAGTTATTAAATAACTTACAGACCAA-A 3154
||||| || |||||||| |||| ||| || ||||||||||||||||||||||| || |
Sbjct 3191 AAAAATAATTAAAAAGATAAAGCAAAAAGCCATAGTTATTAAATAACTTACAGACGAACA 3250
Query 3155 TTTTATAAAATACATTGTAACGACATGATATGCATGATCATGATGACAAACACAAAGATC 3214
|||||||||||||| | ||||| | || |||||||||| || |||| ||||||||||
Sbjct 3251 -TTTATAAAATACATCGCAACGATAGGACATGCATGATC---ATCACAATCACAAAGATC 3306
Query 3215 AGAGACATCTTCAGATGTTTCTTACATATGTTTTGTATACACACACAT-CA-AGTTA-CA 3271
|||||||||||||||||||||||||||| |||||||||||||||||| || | ||| ||
Sbjct 3307 AGAGACATCTTCAGATGTTTCTTACATAAGTTTTGTATACACACACACACATATTTAGCA 3366
Query 3272 ----GTTTCAAGATTCAACCCTG-GTGGTAACGGTCAATCTCCACCGTCCATCCCTTGGT 3326
||| || | |||||| | | | |||||||||||||||||||||||||||||
Sbjct 3367 TCAAGTTACA-GTTTCAACTTTCAGCCCTGGCGGTCAATCTCCACCGTCCATCCCTTGGT 3425
Query 3327 ATCCTCGACCCGACCCGTCTGGATATCATTTAACG 3361
|||||||||||||||||||||||||||| ||||||
Sbjct 3426 ATCCTCGACCCGACCCGTCTGGATATCACTTAACG 3460
> AT3G19710.1 | Symbols: BCAT4 | branched-chain aminotransferase4
| chr3:6846969-6849497 REVERSE LENGTH=1366
Length=1366
Score = 248 bits (134), Expect = 2e-64
Identities = 231/275 (84%), Gaps = 17/275 (6%)
Strand=Plus/Minus
Query 3099 aaaaaaaagcaaaaaGATGAAGC--AAA-CCGTAGTTATTAAATAACTTACAGACCAA-A 3154
||||| || |||||||| |||| ||| || ||||||||||||||||||||||| || |
Sbjct 1329 AAAAATAATTAAAAAGATAAAGCAAAAAGCCATAGTTATTAAATAACTTACAGACGAACA 1270
Query 3155 TTTTATAAAATACATTGTAACGACATGATATGCATGATCATGATGACAAACACAAAGATC 3214
|||||||||||||| | ||||| | || |||||||||| || |||| ||||||||||
Sbjct 1269 -TTTATAAAATACATCGCAACGATAGGACATGCATGATC---ATCACAATCACAAAGATC 1214
Query 3215 AGAGACATCTTCAGATGTTTCTTACATATGTTTTGTATACACACACAT-CA-AGTTA-CA 3271
|||||||||||||||||||||||||||| |||||||||||||||||| || | ||| ||
Sbjct 1213 AGAGACATCTTCAGATGTTTCTTACATAAGTTTTGTATACACACACACACATATTTAGCA 1154
Query 3272 ----GTTTCAAGATTCAACCCTG-GTGGTAACGGTCAATCTCCACCGTCCATCCCTTGGT 3326
||| || | |||||| | | | |||||||||||||||||||||||||||||
Sbjct 1153 TCAAGTTACA-GTTTCAACTTTCAGCCCTGGCGGTCAATCTCCACCGTCCATCCCTTGGT 1095
Query 3327 ATCCTCGACCCGACCCGTCTGGATATCATTTAACG 3361
|||||||||||||||||||||||||||| ||||||
Sbjct 1094 ATCCTCGACCCGACCCGTCTGGATATCACTTAACG 1060
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 167256587962
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5