BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg479510 Length=1380 Score E Sequences producing significant alignments: (Bits) Value AT3G19920.1 | Symbols: | unknown protein; BEST Arabidopsis tha... 2089 0.0 > AT3G19920.1 | Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G64230.1); Has 217 Blast hits to 217 proteins in 16 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 215; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr3:6929711-6931806 REVERSE LENGTH=1415 Length=1415 Score = 2089 bits (1131), Expect = 0.0 Identities = 1302/1383 (94%), Gaps = 17/1383 (1%) Strand=Plus/Plus Query 1 ACAACAAAAAGAGAGAACAATGTCGTCGTCGAGGGAGCTACAATACTTGGAGTACACATA 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 17 ACAACAAAAAGAGAGAACAATGTCGTCGTCGAGGGAGCTACAATACTTGGAGTACACATA 76 Query 61 CAGGAACAACCGTCCCACGACGGGTCTCCTCAACTCCATCTTCATGACCACCGTCAACAC 120 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 77 CAGAAACAACCGTCCCACGACGGGTCTCCTCAACTCCATCTTCATGACCACCGTCAACAC 136 Query 121 GGCCGCTCGTTCTCTCGTCTCCGTCGCCTCCACCGCCTCCACACCGGAGATTCCTTCTAG 180 ||||||||||||||||||||||||||| ||||||||||| ||||| |||||||||||||| Sbjct 137 GGCCGCTCGTTCTCTCGTCTCCGTCGCTTCCACCGCCTCTACACCAGAGATTCCTTCTAG 196 Query 181 GCGGTGGTCGGCTTCGGACCACCTCAGTTTCGCTTCGGGTCTTCTTACCACGGCGGCGGA 240 ||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 197 GCGATGGTCGGCTTCGGACCACCTCAGTTTCGCTTCGGGTCTTCTTACCACGGCTGCGGA 256 Query 241 GAACGCGTTGGTCCCCGCTAAGGCTTCCCCGTCGTCGTTCACGTCATCAACGGCGTTGGT 300 ||||||||||||||| |||||||||||| ||||||||| |||||||||||| |||||||| Sbjct 257 GAACGCGTTGGTCCCGGCTAAGGCTTCCTCGTCGTCGTCCACGTCATCAACTGCGTTGGT 316 Query 301 GAAGTATTCAGGGTCGTCGGATTTGGGTATGATGATTTGCGACGGCGTTGATGAGCCTTC 360 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 317 GAAGTATTCAGGGTCGTCAGATTTGGGTATGATGATTTGCGACGGCGTTGATGAGCCTTC 376 Query 361 CGTTAACTCTCTCGGTAGAGCACTTTGTCACGCATTAGCGCTCATGAACGAGATTCCAGT 420 |||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| Sbjct 377 TGTTAACTCTCTCGGTAGAGCTCTTTGTCACGCATTAGCGCTTATGAACGAGATTCCAGT 436 Query 421 AACCTCAAGAAAATACCAATTTGCCATGGGAATGGCTGAGAAGATCATGGAAGACAACGC 480 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 437 AACCTCAAGAAAATATCAATTTGCCATGGGAATGGCTGAGAAGATCATGGAAGACAACGC 496 Query 481 CCAGAGCGGCCACGTCGATTTACTCGACGTCAATAGAGCGGCCCTCGCTTCCTCCTTTGC 540 |||||||||||||| |||||||| |||||||| ||||||||||| |||||||||||||| Sbjct 497 TCAGAGCGGCCACGTGGATTTACTAGACGTCAACAGAGCGGCCCTAGCTTCCTCCTTTGC 556 Query 541 ACGCACCACTGCGCGTTTGCAGGACTGCTTGAAACGATCTCGAACCGCAGACGAGCCCTT 600 ||||| |||||||| |||||||||||||||||||| ||||||||||| ||||||||||| Sbjct 557 GCGCACTACTGCGCGATTGCAGGACTGCTTGAAACGCTCTCGAACCGCTGACGAGCCCTT 616 Query 601 CGGTGGTTTGCCGCTGCGTGTGGTCAGCGCCCTCCCTCTAGGTGGCTACGTTGCCTCCTA 660 |||||||||||| ||||||||||||||||||||||||| || ||||||||||||||||| Sbjct 617 CGGTGGTTTGCCTTTGCGTGTGGTCAGCGCCCTCCCTCTGGGCGGCTACGTTGCCTCCTA 676 Query 661 CGTGAGAGGGTTAACCGCATGTATCAACACGGTCAGGTCCTTAGCAGACATGACTGGGAA 720 |||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||| Sbjct 677 CGTGAGAGGGTTAAGTGCATGTATCAACACCGTCAGGTCCTTAGCAGACATGACTGGGAA 736 Query 721 CTTGTTATCGCAGAGTAGGAGGAGAGAGTCTGCCGTGGTGAGAGCGGGTGGTATCCTAGA 780 |||||||||||||| |||||||||||||||||| |||||||||||||||||||||| ||| Sbjct 737 CTTGTTATCGCAGACTAGGAGGAGAGAGTCTGCGGTGGTGAGAGCGGGTGGTATCCAAGA 796 Query 781 AAATGAGGCTGAACTAGCAGTCGAGAAGCTTGCGGAGGAGCTGTTGTGGATGACAGAGAA 840 |||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||| Sbjct 797 AAATGAGGCTGAACTAGCGGTCGAGAAGCTTGCGGAGGAGCTGCTGTGGATGACAGAGAA 856 Query 841 GCTTAGGCGTTACGGTGCGGTGGCAGAAGGGATTAAGCGGTGGAGCTACGCTTCCGGTTT 900 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 857 GCTTAGGCGTTATGGTGCGGTGGCAGAAGGGATTAAGCGGTGGAGCTACGCTTCCGGTTT 916 Query 901 AGCTTCCTTGTCTCTCACGGCTGCTCCCAGGGTTCAAGGCCTCATGGTTAAGATTTCGGC 960 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 917 AGCTTCCTTGTCTCTCACGGCTGCTCCCAGGGTTCAAGGCCTCATGGTTAAGATTTCGGC 976 Query 961 GCTCTTAATTGGAGAGTTAGCAAGAGACAGCACACAAGTCCCGGGACAAGTGACATTTAG 1020 ||||||||||||||||||||||||||||||||||||||| || |||||||||||||| || Sbjct 977 GCTCTTAATTGGAGAGTTAGCAAGAGACAGCACACAAGTTCCAGGACAAGTGACATTCAG 1036 Query 1021 GCTCCTTGCAAACTGGCTACCATTGTTTAGTCACGCAAGGAACGGGCTAGCGTTCCCCGT 1080 |||||||||||||||||| ||| ||||||||||||||||||||||||| ||||| ||||| Sbjct 1037 GCTCCTTGCAAACTGGCTCCCACTGTTTAGTCACGCAAGGAACGGGCTTGCGTTTCCCGT 1096 Query 1081 GCTGACGGGATATGAGAGGGTTGAGGTGGAACGAGCAATAGACAAAGCAATCTCGACTTT 1140 |||||||| |||||||| ||||||||||||||||| ||||||||||| ||||||||||| Sbjct 1097 ACTGACGGGTTATGAGAGAGTTGAGGTGGAACGAGCCATAGACAAAGCCATCTCGACTTT 1156 Query 1141 GCCTGCGCTTG-ACCAAGAAATCCTACTTACAAACTGGCTGCAAGATTTCTCAGTCTCGG 1199 ||||| ||| ||||||||||| |||| || |||||||| ||||||||||||||||||| Sbjct 1157 ACCTGCA-TTGGACCAAGAAATCTTACTCACTAACTGGCTCCAAGATTTCTCAGTCTCGG 1215 Query 1200 CATCTGAGTGGCCCAATCTCCAGCCAGCATATGACCGTTGGTGCCACTCCACTCGCCAAC 1259 | || |||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 1216 CCTCCGAGTGGCCCAATCTTCAGCCAGCATATGACCGTTGGTGCCACTCCACTCGCCAAC 1275 Query 1260 TTTTCATGTAGACGACCAATACAATTTAGTCATGATGGTCATGTTCCAAAGAGAA--CAT 1317 |||||||||||||||||||||| ||| | | ||||||||||||||||| ||| Sbjct 1276 TTTTCATGTAGACGACCAATAC--------CAT-A-G-TCATGTTCCAAAGAGAAAACAT 1324 Query 1318 GGATATGCTTGTCGTACTTTTCTTTGCTACGAGTTTTGATAATACCTTCTGTGTCCACAC 1377 | | || |||| |||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 1325 GAAAAT--TTGTTGTACTTTTCTTTGCTACGAGTTTTGATATTACCTTCTGTGTCCACAT 1382 Query 1378 ATT 1380 ||| Sbjct 1383 ATT 1385 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 67971537930 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5