BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg479516
Length=1515
Score E
Sequences producing significant alignments: (Bits) Value
AT3G19980.1 | Symbols: ATFYPP3, EMB2736, STPP, FYPP3 | flower-s... 2396 0.0
AT1G50370.1 | Symbols: | Calcineurin-like metallo-phosphoester... 1253 0.0
> AT3G19980.1 | Symbols: ATFYPP3, EMB2736, STPP, FYPP3 | flower-specific,
phytochrome-associated protein phosphatase 3 | chr3:6961736-6965108
FORWARD LENGTH=1531
Length=1531
Score = 2396 bits (1297), Expect = 0.0
Identities = 1465/1540 (95%), Gaps = 35/1540 (2%)
Strand=Plus/Plus
Query 1 AACGCAAAAGTGTGATTTGCGTTTGAAGCGGCAGAGATCGATCTGGGAtttttttttC-T 59
||||||||||| ||||||||||| ||||||||||||||||||||||||| |||||||| |
Sbjct 1 AACGCAAAAGTTTGATTTGCGTTGGAAGCGGCAGAGATCGATCTGGGATCTTTTTTTCTT 60
Query 60 TTTGCCGTA--TGTCATTTTGTGGAACTCGAACCTCTCATTATTCTCTCTTTCATCTCCT 117
||||||||| |||||||||||| |||||||||||||| |||||||||||||||||||
Sbjct 61 TTTGCCGTATGTGTCATTTTGTGAAACTCGAACCTCTC---ATTCTCTCTTTCATCTCCT 117
Query 118 CCGCTTACGTAACCCTAACGAAGTCGAAGATTCTCTGGTAGATCTATCTTGATTCGATTC 177
|| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 118 CCTCTTACGTAACCCTAACGAAGTCGAAGATTCTCTGGTAGATCTATCTCGATTCGATTC 177
Query 178 GATTCTTCTTTTTTCCCAGAAAAGTCGCTATTGAATTCGAACGAAAGAGGTT-TAGTTTT 236
||||| ||||||||||||||||||||||||||||| ||||||||||| ||| || ||
Sbjct 178 GATTCCTCTTTTTTCCCAGAAAAGTCGCTATTGAAATCGAACGAAAG-TGTTGAAG-ATT 235
Query 237 TTACCAGTCAGAGG------TATATAGATAG-G-GTTATGGATTTGGATCAATGGATTTC 288
|||||||||||||| |||||||| || | ||||||||||||||||||||||||||
Sbjct 236 TTACCAGTCAGAGGTATATATATATAGAGAGAGAGTTATGGATTTGGATCAATGGATTTC 295
Query 289 CAAGGTTAAAGATGGTCAGCATCTCTCCGAAGACGAGCTTCAGCTTCTCTGCGAATACGT 348
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 296 CAAGGTTAAAGATGGTCAGCATCTCTCCGAAGACGAGCTTCAGCTTCTCTGCGAATACGT 355
Query 349 GAAAGAGATTCTGATTGAGGAGTCTAACGTACAGCCTGTAAACAGTCCAGTCACAGTATG 408
|||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||
Sbjct 356 GAAAGAGATTCTGATTGAGGAGTCAAACGTACAGCCTGTAAACAGTCCAGTCACCGTATG 415
Query 409 TGGTGATATCCATGGCCAGTTTCATGATCTTATGAAGCTTTTTCAGACTGGAGGTCATGT 468
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 416 TGGTGATATCCATGGCCAGTTTCATGATCTTATGAAGCTTTTTCAGACCGGAGGTCATGT 475
Query 469 TCCCGACACCAATTACATTTTTATGGGGGACTTTGTGGATAGAGGTTACAACAGCCTTGA 528
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 476 TCCCGACACCAATTACATTTTTATGGGGGACTTCGTGGATAGAGGTTACAACAGCCTTGA 535
Query 529 AGTCTTCACTATTCTTTTACTTCTTAAAGCTAGATATCCAGCCAATATTACACTTTTGCG 588
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 536 AGTCTTCACTATTCTTTTACTTCTTAAAGCTAGATATCCAGCCAATATTACACTTTTGCG 595
Query 589 TGGAAATCATGAAAGTAGGCAGCTAACGCAGGTGTATGGTTTCTATGACGAATGCCAGAG 648
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 596 CGGAAATCATGAAAGTAGGCAGCTAACGCAGGTGTATGGTTTCTATGACGAATGCCAGAG 655
Query 649 GAAGTATGGTAACGCTAATGCTTGGCGATATTGCACAGATGTTTTTGACTATCTTACCCT 708
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 656 GAAGTATGGTAACGCTAATGCGTGGCGATATTGCACAGATGTTTTTGACTATCTTACCCT 715
Query 709 GTCAGCTATTATAGATGGCACAGTTCTATGTGTCCACGGGGGCCTTTCCCCGGATGTTCG 768
||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| ||
Sbjct 716 GTCAGCTATTATAGATGGCACAGTTCTATGTGTTCACGGTGGCCTTTCCCCGGATGTCCG 775
Query 769 GACAATTGATCAGATAAGACTGATCGAGCGAAATTGCGAAATTCCTCATGAAGGGCCCTT 828
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 776 GACAATTGATCAGATAAGACTGATCGAGCGAAATTGCGAAATTCCTCATGAAGGGCCCTT 835
Query 829 TTGCGATCTTATGTGGAGCGATCCTGAAGATATTGAAACATGGGCGGTTAGTCCACGTGG 888
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 836 TTGCGATCTTATGTGGAGTGATCCTGAAGATATTGAAACATGGGCGGTTAGTCCACGTGG 895
Query 889 AGCTGGTTGGCTTTTCGGATCCAGGGTTACCACTGAGTTTAACCATATCAACAAGCTTGA 948
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 896 AGCTGGTTGGCTTTTCGGATCCAGGGTTACCACTGAGTTTAACCATATCAACAAGCTGGA 955
Query 949 TCTAGTATGCCGCGCGCACCAGCTTGTACAAGAAGGTCTTAAGTACATGTTCCAAGATAA 1008
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 956 TCTAGTATGCCGCGCGCACCAACTTGTACAAGAAGGTCTTAAGTACATGTTCCAAGATAA 1015
Query 1009 AGGCCTTGTAACTGTATGGTCTGCACCTAATTACTGTTACCGCTGTGGGAATGTCGCATC 1068
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1016 AGGCCTTGTAACTGTATGGTCTGCACCTAATTACTGTTACCGCTGTGGGAATGTCGCTTC 1075
Query 1069 TATATTGAGTTTCAATGACAACATGGAAAGGGAAGTGAAGTTCTTCACAGAGACAGAAGA 1128
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1076 TATATTGAGTTTCAATGACAACATGGAAAGGGAAGTGAAGTTCTTCACAGAGACAGAAGA 1135
Query 1129 GAACAATCAAATGAGAGGGCCAAGGACTGGAGTTCCGTATTTCCTATGAAGAATCACACT 1188
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1136 GAACAATCAAATGAGAGGGCCAAGGACTGGAGTTCCGTATTTCCTATGAAGAATCACACT 1195
Query 1189 -ATTATATTTGCTGTGATGATGAAGCCATTGCTGCCATTGGCAATATGTTCAGTG---T- 1243
||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 1196 TATTATATTTGCTGTGATGATGAAGCCATTGCTGCCATTGGCAATATGTTCAGTTCAATG 1255
Query 1244 TG-AAAAGGTTAatatataattatatatattatCTATTGATGGGTTTCACTTACTATCAT 1302
|| ||||||||||||||| ||||||||||||||||| ||||||||||| |||||||||||
Sbjct 1256 TGGAAAAGGTTAATATATGATTATATATATTATCTACTGATGGGTTTCGCTTACTATCAT 1315
Query 1303 TATTTTTGTCCTTTAGGTTACATTTTCCTTATGAAAGTTATAAGTCAAAAACACTTTTGG 1362
||||||||||||||||||||||||| |||| ||||||||| |||||||| |||||| ||
Sbjct 1316 TATTTTTGTCCTTTAGGTTACATTTCCCTTGTGAAAGTTACAAGTCAAA--CACTTT-GG 1372
Query 1363 TATTAGTTTTAGTCATTTTGAGTCTCT-CTACTCTTCT-TTTCCCCCCAATCTTTCTTCT 1420
|| |||| ||||||||||||| ||||| || ||||| | |||||||| ||||||||||||
Sbjct 1373 TAATAGTCTTAGTCATTTTGATTCTCTGCT-CTCTTTTCTTTCCCCC-AATCTTTCTTCT 1430
Query 1421 GTAATGttttttttttCATTGTTCACTTGCACTGTTTCCTCTATTTTC-T-GTTGTTGT- 1477
|||||||| |||||||||||||||||||| |||||||||||| |||| | ||||||||
Sbjct 1431 GTAATGTTATTTTTTTCATTGTTCACTTGTACTGTTTCCTCTGTTTTTGTTGTTGTTGTT 1490
Query 1478 G--AAGATGACATTAATTCTAAAATAATCAAACATCGTTA 1515
| |||||||||||||||||||||||||||||||||||||
Sbjct 1491 GTGAAGATGACATTAATTCTAAAATAATCAAACATCGTTA 1530
> AT1G50370.1 | Symbols: | Calcineurin-like metallo-phosphoesterase
superfamily protein | chr1:18658647-18661974 FORWARD LENGTH=1461
Length=1461
Score = 1253 bits (678), Expect = 0.0
Identities = 835/913 (91%), Gaps = 2/913 (0%)
Strand=Plus/Plus
Query 266 ATGGATTTGGATCAATGGATTTCCAAGGTTAAAGATGGTCAGCATCTCTCCGAAGACGAG 325
|||||||| |||||||||||||||||||||||||| || || |||||||| || ||||||
Sbjct 248 ATGGATTTAGATCAATGGATTTCCAAGGTTAAAGACGGCCAACATCTCTCTGAGGACGAG 307
Query 326 CTTCAGCTTCTCTGCGAATACGTGAAAGAGATTCTGATTGAGGAGTCTAACGTACAGCCT 385
||||| ||||||||||||||||||||||| ||||| |||||||| || || ||||| |||
Sbjct 308 CTTCAACTTCTCTGCGAATACGTGAAAGAAATTCTTATTGAGGAATCAAATGTACAACCT 367
Query 386 GTAAACAGTCCAGTCACAGTATGTGGTGATATCCATGGCCAGTTTCATGATCTTATGAAG 445
|| |||||||| ||||| || ||||||||||||||||||||||||||||||||||||||
Sbjct 368 GTCAACAGTCCTGTCACCGTCTGTGGTGATATCCATGGCCAGTTTCATGATCTTATGAAA 427
Query 446 CTTTTTCAGACTGGAGGTCATGTTCCCGACACCAATTACATTTTTATGGGGGACTTT-GT 504
||||| ||||| ||||||||||||||||| ||||||||||| ||||||||||| ||| ||
Sbjct 428 CTTTTCCAGACCGGAGGTCATGTTCCCGAGACCAATTACATATTTATGGGGGA-TTTCGT 486
Query 505 GGATAGAGGTTACAACAGCCTTGAAGTCTTCACTATTCTTTTACTTCTTAAAGCTAGATA 564
||||||||||||||||| |||||||| ||||| |||||||| ||||||||||| ||| |
Sbjct 487 TGATAGAGGTTACAACAGTCTTGAAGTTTTCACCATTCTTTTGCTTCTTAAAGCAAGACA 546
Query 565 TCCAGCCAATATTACACTTTTGCGTGGAAATCATGAAAGTAGGCAGCTAACGCAGGTGTA 624
|||||||||||| || |||||||||||||||||||||||||| |||||||| ||||||||
Sbjct 547 TCCAGCCAATATCACTCTTTTGCGTGGAAATCATGAAAGTAGACAGCTAACTCAGGTGTA 606
Query 625 TGGTTTCTATGACGAATGCCAGAGGAAGTATGGTAACGCTAATGCTTGGCGATATTGCAC 684
||||||||||||||||||||| |||||||||||||| |||||||||||| ||||||||||
Sbjct 607 TGGTTTCTATGACGAATGCCAAAGGAAGTATGGTAATGCTAATGCTTGGAGATATTGCAC 666
Query 685 AGATGTTTTTGACTATCTTACCCTGTCAGCTATTATAGATGGCACAGTTCTATGTGTCCA 744
|||||||||||||||||||| || |||||||||||||||||||| ||||||||||| ||
Sbjct 667 GGATGTTTTTGACTATCTTACACTTTCAGCTATTATAGATGGCACTGTTCTATGTGTTCA 726
Query 745 CGGGGGCCTTTCCCCGGATGTTCGGACAATTGATCAGATAAGACTGATCGAGCGAAATTG 804
|| |||||||| || ||||| ||||||||||| ||||||||| |||| ||||| |||||
Sbjct 727 TGGTGGCCTTTCACCTGATGTACGGACAATTGACCAGATAAGATTGATTGAGCGGAATTG 786
Query 805 CGAAATTCCTCATGAAGGGCCCTTTTGCGATCTTATGTGGAGCGATCCTGAAGATATTGA 864
|||||| || |||||||| ||||| || |||||||||||||| |||||||||||||||||
Sbjct 787 CGAAATACCGCATGAAGGACCCTTCTGTGATCTTATGTGGAGTGATCCTGAAGATATTGA 846
Query 865 AACATGGGCGGTTAGTCCACGTGGAGCTGGTTGGCTTTTCGGATCCAGGGTTACCACTGA 924
||||||||| || ||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 847 AACATGGGCTGTCAGTCCACGTGGAGCTGGTTGGCTTTTCGGGTCCAGGGTTACCACTGA 906
Query 925 GTTTAACCATATCAACAAGCTTGATCTAGTATGCCGCGCGCACCAGCTTGTACAAGAAGG 984
|||||||||||| ||||| |||||||||||||| ||||| ||||||||||||||||||||
Sbjct 907 GTTTAACCATATTAACAATCTTGATCTAGTATGTCGCGCTCACCAGCTTGTACAAGAAGG 966
Query 985 TCTTAAGTACATGTTCCAAGATAAAGGCCTTGTAACTGTATGGTCTGCACCTAATTACTG 1044
||| ||||||||||||||||||||||| ||||||||||| |||||||| |||||||||||
Sbjct 967 TCTCAAGTACATGTTCCAAGATAAAGGTCTTGTAACTGTGTGGTCTGCGCCTAATTACTG 1026
Query 1045 TTACCGCTGTGGGAATGTCGCATCTATATTGAGTTTCAATGACAACATGGAAAGGGAAGT 1104
||||| ||||||||||| || ||||||||||||||||||||||||||||||||||||||
Sbjct 1027 CTACCGTTGTGGGAATGTGGCTTCTATATTGAGTTTCAATGACAACATGGAAAGGGAAGT 1086
Query 1105 GAAGTTCTTCACAGAGACAGAAGAGAACAATCAAATGAGAGGGCCAAGGACTGGAGTTCC 1164
|||||||||||| |||||||||||||||||||||||||||||||||||||| || |||||
Sbjct 1087 GAAGTTCTTCACGGAGACAGAAGAGAACAATCAAATGAGAGGGCCAAGGACAGGTGTTCC 1146
Query 1165 GTATTTCCTATGA 1177
|||||||| |||
Sbjct 1147 TTATTTCCTGTGA 1159
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 74748611505
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5