BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg479538 Length=355 Score E Sequences producing significant alignments: (Bits) Value AT3G20180.1 | Symbols: | Copper transport protein family | chr... 590 4e-168 > AT3G20180.1 | Symbols: | Copper transport protein family | chr3:7043385-7043841 REVERSE LENGTH=357 Length=357 Score = 590 bits (319), Expect = 4e-168 Identities = 343/355 (97%), Gaps = 0/355 (0%) Strand=Plus/Plus Query 1 ATGCGTATCAAATTGTCAGTGAACAGTGAAAAATGCAGGAAGAAGGCAATGCAAGTGGCA 60 |||||||||||| |||||||||| |||||||||||||||||||||||||||||||| ||| Sbjct 1 ATGCGTATCAAACTGTCAGTGAATAGTGAAAAATGCAGGAAGAAGGCAATGCAAGTAGCA 60 Query 61 GTTGTTGCAAATGGTGTAACTTCAGTGGCGATGGAAGGGGAATTTCAGGATGAGCTTGTG 120 |||| |||| ||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct 61 GTTGCTGCAGATGGTGTAACTTCAGTGGCCATGGAAGGAGAATTTCAGGATGAGCTTGTG 120 Query 121 GTTGTTGGAGATGGAGTGGATGCAGCGTCTTTGATTATGGCCTTGAGGAAGAAAGCATGT 180 ||||||||||||||||||||| |||| ||||||||||||||||| ||||||||||||||| Sbjct 121 GTTGTTGGAGATGGAGTGGATTCAGCTTCTTTGATTATGGCCTTAAGGAAGAAAGCATGT 180 Query 181 CATGTCACTCTTGAGACTCTTGAAGAAGTGAAGAAGCCACAGGTCGAAGAGAAGTCTGTT 240 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 181 CATGTCACTCTTGAGACTCTTGAAGAAGTGAAGAAGCCACAGGTCGAAGAGAAGTCTATT 240 Query 241 ACACCGCATTGCTGCATAGCTCAATGTCCTGTGGTTAGCAATGAGCAGCCAAGGCCTGAG 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 241 ACACCGCATTGCTGCATAGCTCAATGTCCTGTGGTTAGCAATGAGCAGCCAAGGCCTGAG 300 Query 301 GTTTATAGAATAGTGCATGATTCTTATGGTCCAACTACTGGGTGCTTAGTTATGT 355 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 301 GTTTATAGAATAGTGCATGATTCTTATGGTCCAACCACTGGGTGCTTAGTTATGT 355 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 16638624919 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5