BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg479539
Length=2237
Score E
Sequences producing significant alignments: (Bits) Value
AT3G20190.1 | Symbols: | Leucine-rich repeat protein kinase fa... 3428 0.0
AT1G50610.1 | Symbols: | Leucine-rich repeat protein kinase fa... 1014 0.0
> AT3G20190.1 | Symbols: | Leucine-rich repeat protein kinase
family protein | chr3:7044943-7047390 FORWARD LENGTH=2272
Length=2272
Score = 3428 bits (1856), Expect = 0.0
Identities = 2139/2271 (94%), Gaps = 38/2271 (2%)
Strand=Plus/Plus
Query 1 AAAAGAGGT-AGAATTGTTCTTGAAGAATCGA-TCTATAGCGCGTGTTAGCTGCAATGCT 58
||||||||| || ||||||||||||||||||| ||||||| ||||||||||| |||||||
Sbjct 1 AAAAGAGGTAAG-ATTGTTCTTGAAGAATCGATTCTATAGAGCGTGTTAGCTTCAATGCT 59
Query 59 AACTTGGGAGACCCCAGTTATGCTTGCAAGCAACACCGCCTCAACGAAAAAGCTTGCCTT 118
||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||
Sbjct 60 AACTTGGGAGACCCCAGTTATGCTTGCAAGCAACACCGCCTCAACCAAAAAGCTAGCCTT 119
Query 119 CATTACCACCTTCCTCATCATTGTGTTAT-TCCCGGACACAATGGTTATGTCTCAGCCGC 177
|||||||||||| |||||||||||||||| | |||| ||||||||| |||||||||||||
Sbjct 120 CATTACCACCTTTCTCATCATTGTGTTATGT-CCGGTCACAATGGTCATGTCTCAGCCGC 178
Query 178 AGGCGGACGTTGTGCCACTGCCAGGCTCAGACGCAGATTGTCTCTTGAAATTCAAAGATA 237
||||||| ||| |||||||||||| ||||||||||||||| ||||||| ||| |||||||
Sbjct 179 AGGCGGATGTTTTGCCACTGCCAGCCTCAGACGCAGATTGCCTCTTGAGATTTAAAGATA 238
Query 238 CTTTGGTTAATGCATCGTTCATTAGCAGTTGGGATCCTTCCATCTCCCCGTGTAAGCGAA 297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 239 CTTTGGTTAATGCATCGTTCATTAGCAGTTGGGATCCTTCCATCTCCCCGTGTAAGCGAA 298
Query 298 ACTCGGAGAATTGGTTCGGCGTTCTCTGTGTTACCGGTAATGTTTGGGGCCTACAACTCG 357
|||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 299 ACTCAGAGAATTGGTTCGGTGTTCTCTGTGTTACCGGTAATGTTTGGGGCCTACAACTCG 358
Query 358 AAGGAATGGGGTTAACCGGAAAGCTAGACCTTGAACCATTAGCTCCGATCAAGAATCTAC 417
|||||||||| |||||||| ||||| |||||||||||||||||| | |||||||||||||
Sbjct 359 AAGGAATGGGCTTAACCGGGAAGCTTGACCTTGAACCATTAGCTGCAATCAAGAATCTAC 418
Query 418 GAACCTTAAGCTTCATGAACAATAAATTTAACGGTTCAATGCCATCTGTCAAGAATCTCG 477
||||||| |||||||||||||| ||||||||||||||||||||||||||||||||| | |
Sbjct 419 GAACCTTGAGCTTCATGAACAACAAATTTAACGGTTCAATGCCATCTGTCAAGAATTTTG 478
Query 478 GTGCGTTGAAGTCATTGTACTTGTCTAACAACCGGTTTACAGGGGAGATACCCGCCGATG 537
|||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 479 GTGCGTTGAAATCATTGTACTTGTCTAACAACCGGTTTACAGGGGAGATACCCGCGGATG 538
Query 538 CGTTTGATGGTATGCATCATTTGAAGAAGCTTCTGTTGGCTAACAACGCATTTCGGGGGA 597
||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||
Sbjct 539 CGTTTGATGGTATGCATCATTTGAAGAAGCTTCTGTTGGCTAACAACGCGTTTCGAGGGA 598
Query 598 ACATCCCTTCTTCTTTAGCTTCTTTGCCAATGCTTTTAGAGTTGAGGGTAAATGGGAATC 657
||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||
Sbjct 599 GTATCCCTTCTTCTTTAGCTTATTTGCCAATGCTTTTAGAGTTGAGGCTAAATGGGAATC 658
Query 658 AGTTTCATGGGCAAATACCTGATTTTAAACAGAAGGATCTTAAGTTGGCTAGCTTCGAAA 717
||||||||||| |||||||| |||||||||| ||||| ||||||||||||||||||||||
Sbjct 659 AGTTTCATGGGGAAATACCTTATTTTAAACAAAAGGACCTTAAGTTGGCTAGCTTCGAAA 718
Query 718 ACAATGACCTCGAGGGACCTATACCGGGAAGCCTTAGCAATATGGATCCTGGCTCCTTTT 777
||||||||||||||||||||||||||| |||||||||||| |||||||||| ||||||||
Sbjct 719 ACAATGACCTCGAGGGACCTATACCGGAAAGCCTTAGCAACATGGATCCTGTCTCCTTTT 778
Query 778 CAGGGAACAAGAACTTGTGTGGACCTCCACTAAGCCCATGTTCGAGTGATTCGGGATCTT 837
|||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||
Sbjct 779 CAGGGAACAAGAACTTGTGTGGTCCTCCACTAAGCCCATGTTCGAGTGATTCAGGATCTT 838
Query 838 CTCCGGATCTCCCTTCTAGTCCCACGGAGAAGAACAAGAACCAATCTTTCTTCACCATTG 897
|||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||
Sbjct 839 CTCCGGATCTCCCTTCTAGTCCCACGGAAAAGAACAAGAACCAATCTTTCTTCATCATTG 898
Query 898 CTATTGTTCTGATTGTTATTGGGATAATACTGATGATCATTTCGCTTGTGGTCTGTATCC 957
| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 899 CAATTGTTCTGATTGTCATTGGGATAATACTGATGATCATTTCGCTTGTGGTCTGTATCC 958
Query 958 TTGATACCAGAAAACGGAA-ATCTTTGTCGGCCTATCCATCCGCGGGTCAGGACAGGACA 1016
|| ||||||||| ||| || | ||||||||| |||||||||||||||||||||||||||
Sbjct 959 TTCATACCAGAAGACGCAAGA-GTTTGTCGGCTTATCCATCCGCGGGTCAGGACAGGACA 1017
Query 1017 GAGAAATACAATTACGATCAATCCACGGACAAGGACAAAGCCGCAGATTCTGTCACGAGT 1076
||||||||||| ||||||||||| ||||||||||| ||||| ||||||||||| ||||||
Sbjct 1018 GAGAAATACAACTACGATCAATCTACGGACAAGGATAAAGCTGCAGATTCTGTAACGAGT 1077
Query 1077 TACACTAGTAGGAGGGGAGCAGTACCAGATCAGAATAAACTCTTGTTTTTGCAAGATGAC 1136
||||||||||| || ||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 1078 TACACTAGTAGAAGAGGAGCAGTACCGGATCAGAATAAACTCTTGTTTTTGCAAGATGAC 1137
Query 1137 ATTCAGAGATTTGACCTTCAAGATCTTCTTAGAGCCTCTGCTGAAGTTCTTGGGAGTGGA 1196
||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1138 ATTCAAAGATTTGACCTTCAAGATCTTCTTAGAGCCTCTGCTGAAGTTCTTGGGAGCGGA 1197
Query 1197 AGCTTTGG-TGCTTCTTATAAAACTGGGATAAATAGCGGACAGACGCTGGTCGTGAAGAG 1255
|||||||| | ||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 1198 AGCTTTGGCT-CTTCTTATAAAACTGGGATAAATAGCGGACAGATGCTGGTCGTGAAGAG 1256
Query 1256 GTATAAACATATGAACAATGTCGGAAGAGAGGAGTTTCATGACCATATGAGACGGTTAGG 1315
||||||||||||||||||||| |||||||| ||||||||||| |||||||||||||||||
Sbjct 1257 GTATAAACATATGAACAATGTTGGAAGAGATGAGTTTCATGAGCATATGAGACGGTTAGG 1316
Query 1316 GAGATTGAACCATCCAAATCTGTTGCCTATTGTGGCATACTATTACCGCAGAGAAGAGAA 1375
||||||||| ||||| |||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1317 GAGATTGAAACATCCGAATCTGTTGCCTATTGTGGCTTACTATTACCGCAGAGAAGAGAA 1376
Query 1376 GCTCTTGATCGCTGAGTTCATGCCAAATCGTAGCTTGGCAAGCCATCTTCACGCGAATCA 1435
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1377 GCTCTTGATCGCTGAGTTCATGCCAAATCGTAGCTTGGCAAGCCATCTTCACGCGAATCA 1436
Query 1436 TTCTGTTGATCAACCTGGATTGGATTGGCCAACAAGGGTAAAGATTATACAAGGAGTGGC 1495
|||||| |||||||| ||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 1437 TTCTGTGGATCAACCGGGATTGGATTGGCCAACAAGGCTAAAGATTATACAAGGAGTGGC 1496
Query 1496 TAAGGGTTTAGGTTACTTGTTCAACGAGCTAACAACCCTAACAATCCCTCACGGTCATCT 1555
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1497 TAAGGGTTTAGGTTACTTGTTCAACGAGCTAACAACCCTAACAATCCCTCACGGTCATCT 1556
Query 1556 CAAGTCATCGAACGTTGTATTGGACGAATCATTCGAGCCTCTCTTAACCGATTATGCACT 1615
||||||||||||||||||||||||||||||||| ||||| ||| ||||||||||||||||
Sbjct 1557 CAAGTCATCGAACGTTGTATTGGACGAATCATTTGAGCCACTCCTAACCGATTATGCACT 1616
Query 1616 AAGACCGGTGATGAACTCAGAGCAGTCTCACAATCTAATGATCTCATATAAATCACCAGA 1675
|||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1617 AAGACCAGTGATGAACTCAGAGCAGTCTCACAATCTAATGATCTCTTATAAATCACCAGA 1676
Query 1676 GTATAGCTTAAAGGGACATCTAACAAAAAAGACAGATGTTTGGTGCCTCGGGGTTTTGAT 1735
|||||||||||||||||||||||| ||||||||||||||||||||||| ||||| |||||
Sbjct 1677 GTATAGCTTAAAGGGACATCTAACTAAAAAGACAGATGTTTGGTGCCTGGGGGTATTGAT 1736
Query 1736 CTTGGAGCTATTAACAGGTAGGTTTCCGGAGAATTATCTAAGCCAAGGGTACGATGCTAA 1795
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1737 CTTGGAGCTTTTAACAGGTAGGTTTCCGGAGAATTATCTAAGCCAAGGGTACGATGCTAA 1796
Query 1796 CATGAGCCTCGTAACTTGGGTCAGCAACATGGTTAAGGAGAAGAAAACGGGTGACGTGTT 1855
||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||
Sbjct 1797 CATGAGCCTCGTAACTTGGGTGAGCAACATGGTTAAGGAGAAGAAAACAGGTGACGTGTT 1856
Query 1856 TGACAAGGAAATGACTGGGAAGAAGAACTGCAAAGCAGAGATGCTAAACCTTTTGAAAAT 1915
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1857 TGACAAGGAAATGACTGGGAAGAAAAACTGCAAAGCAGAGATGCTAAACCTTTTGAAAAT 1916
Query 1916 CGGGTTGAGTTGTTGCgaagaagatgaagaaaggaggatggagatgagagatgcggtgga 1975
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1917 CGGGTTGAGTTGTTGCGAAGAAGATGAAGAAAGGAGGATGGAGATGAGAGATGCTGTGGA 1976
Query 1976 gaagatagagaggttaaaagaaggagaaTTTGACAATGATTTCGCATCGACGACAAATAA 2035
||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||
Sbjct 1977 GAAGATAGAGAGGTTAAAAGAAGGAGAGTTTGACAATGATTTCGCATCGACGACACATAA 2036
Query 2036 TGTCTTCGCTTCTCGGTTGATAGATGACGATGACTTTGGTTTCGCCATGAATCGATGATG 2095
|||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 2037 TGTCTTTGCTTCTCGGTTGATAGACGACGATGACTTTGGTTTCGCCATGAATCGATGATG 2096
Query 2096 A---TGATCAGTCTTCTTCAGAAGAATGGAAAA-GCTAAACAATTTGTAATCTTTT-T-C 2149
| ||||||||||||| ||||| ||||||||| ||||||||||||||||||||| | |
Sbjct 2097 AAACTGATCAGTCTTCTCCAGAACAATGGAAAAAGCTAAACAATTTGTAATCTTTGATGC 2156
Query 2150 ----T-----G------TTTGTT---CTT-T--GTTATGTAACTTTTTCCATCCTTA-AA 2187
| | ||| || ||| | ||||||||||||||||||| |||| ||
Sbjct 2157 CAAATAAAAAGAAGAACTTTCTTTTTCTTCTTTGTTATGTAACTTTTTCCATTCTTATAA 2216
Query 2188 -TCACTCTCTTCGTGTAATTGTAAATCCATTTTGCAGAGTTTTGAAAGTTT 2237
||| |||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 2217 ATCATTCTCTTCGTGTAATTGTAAATCCATTTTGCAGAGTTTTGAAAATTT 2267
> AT1G50610.1 | Symbols: | Leucine-rich repeat protein kinase
family protein | chr1:18742135-18744725 FORWARD LENGTH=2321
Length=2321
Score = 1014 bits (549), Expect = 0.0
Identities = 1468/1893 (78%), Gaps = 137/1893 (7%)
Strand=Plus/Plus
Query 204 TCAGACGCAGATTGTCTCTTGAAATTCAAAGATACTTTGGTTAATGCATCGTTCA-TTAG 262
||||| ||||||||||||||| |||||||||||| || | |||| || | || |
Sbjct 172 TCAGATGCAGATTGTCTCTTGCGATTCAAAGATACATTAGCAAATGGTTC-AGAATTTCG 230
Query 263 CAGTTGGGATCC-TTCCATC-TCCCCGTGT-AAGCGAAACT-C-GGAGAATTGGTTCGGC 317
||||||||||| || ||| || || ||| ||| |||| | | | | |||||||| ||
Sbjct 231 TAGTTGGGATCCATT--ATCATCACCATGTCAAG-GAAA-TACAGCA-AATTGGTTTGGT 285
Query 318 GTTCTCTGTGTTACCGGTAATGTTTGGGGCCTACAACTCGAAGGAATGGGGTTAACC-GG 376
||||| | || || | | | |||||||| ||||||| || |||||||| || ||| ||
Sbjct 286 GTTCT-T-TG-TAGCAATTACGTTTGGGGATTACAACTTGAGGGAATGGGTTTGACCGGG 342
Query 377 AAAGCTAGACCTTGAACCATTAGCTCCGATCAAGAATCTACGAACCTTAAGCTTCATGAA 436
||| ||| |||| || ||||| | ||| || |||||||| |||||| |||||||||||||
Sbjct 343 AAA-CTAAACCTCGACCCATTGGTTCCAATGAAGAATCTGCGAACCATAAGCTTCATGAA 401
Query 437 CAATAAATTTAACGGTTCAATGCCATC-TGTCAAGA-ATCTCGGTGCGTTGAAGTCATTG 494
|||||| || || || ||||||| || || |||| | | | || |||| || |||
Sbjct 402 CAATAACTTCAATGGCCCAATGCC-TCAAGTTAAGAGGT-TTACTTCGCTGAAATCTTTG 459
Query 495 TACTTGTCTAACAACCGGTTTACAGGGGAGATACCCGCCGATGCGTTTGAT-GGTATG-C 552
|| |||||||| ||||||||| | |||||||||||||| ||||| ||| | |||||| |
Sbjct 460 TATTTGTCTAATAACCGGTTTTCGGGGGAGATACCCGCAGATGCATTT-CTAGGTATGCC 518
Query 553 ATCATTTGAAGAAGCTTCTGTTGGCTAACAACGCATTTCGGGGGAAC-ATCCCTTCTTCT 611
| | ||||||||| || || ||||||| |||||| ||| | ||||| || |||||||||
Sbjct 519 A-CTTTTGAAGAAAATTTTGCTGGCTAATAACGCA-TTCCGAGGAACAATTCCTTCTTCT 576
Query 612 TTAGCTTCTTTGCCAATGCTTTTAGAGTTGAGGGTAAATGGGAATCAGTTTCATGGGCAA 671
|||| ||||||||||||||||||||||||||| ||||||| ||||| ||||| ||||||
Sbjct 577 CTAGCCTCTTTGCCAATGCTTTTAGAGTTGAGGCTAAATGGTAATCAATTTCAAGGGCAA 636
Query 672 ATACC-TGATTTTAAACAGAAGGATCTTAAGTTGGCTAGCTTCGAAAACAATGACCTCGA 730
||||| | |||| |||||||||||||||| || |||||||| ||||||||||| |||||
Sbjct 637 ATACCAT-CTTTTCAACAGAAGGATCTTAAATTAGCTAGCTTTGAAAACAATGATCTCGA 695
Query 731 GGGACCTATACCGGGAAGCCTTAGCAATATGGATCCTGGCTCCTTTT-CAGGGAAC-AAG 788
||||| ||||| | ||| ||| | || |||||||| |||| ||||| |||| ||| |||
Sbjct 696 TGGACCGATACCTGAAAGTCTTCGAAACATGGATCCAGGCT-CTTTTGCAGGTAACAAAG 754
Query 789 AACTTGTGTGGA-CCTCCAC-TAAGCCCATGTT-CGAGTGAT-T-C--GGGAT-C--TT- 837
|||||| || |||| | |||| ||||||| | | | | | ||| | | ||
Sbjct 755 -GTTTGTGT-GATGCTCC-CTTAAGTCCATGTTCCTCTTCCTCTCCGGGGGTTCCTGTTG 811
Query 838 CTCCGG-ATCTCCC-----T------TCTA-GTC-CCACGGA-GAAGAACAAGAACC-AA 881
||||| ||||||| | |||| || || | | | ||| ||| || |
Sbjct 812 TTCCGGTATCTCCCGTTGATCCAAAATCTACTTCTCCTCCCACGGGGAAAAAG-GCCGGA 870
Query 882 TCTTTCTT-CAC-CATTGCTATTGTTCTGATTGTTATTGGGATAATACTGA-TGATCATT 938
||||| || ||| | | || || || ||||||||||||| |||||||| | |||||||
Sbjct 871 TCTTT-TTACACTC-TAGCAATCATTTTGATTGTTATTGGCATAATACT-AGTGATCATC 927
Query 939 TCGCTTGTGGTCTGTATCCTT-GATACCAGAAAACGGAAATCT-TTGTCGGCCTATCCAT 996
|||||||| ||||| || || || | |||| || | ||| | ||||| || ||||| |
Sbjct 928 GCGCTTGTGTTCTGTTTCGTTCAAT-CAAGAAGAC-GTAATTTCTTGTCAGCTTATCCTT 985
Query 997 C--C-GCGGGTCAGGACAGGACAGAGAAATACAATTA-CGATCAATCCACGGACAAGGAC 1052
| | ||||| | || |||| ||||| || ||||| | |||||||||| ||||| ||
Sbjct 986 CTTCTGCGGGAAAAGAAAGGATAGAGAGCTATAATTATC-ATCAATCCACAAACAAGAAC 1044
Query 1053 ---AAAGCCGCAGATTCTGTCACGAGTTACACTAGTAGGAGGGGAGCAG-TACCAGAT-C 1107
||| ||||||| || || | | | |||| | ||||| ||| | | | || ||| |
Sbjct 1045 AATAAACCCGCAGAATCCGT-A--AATCACAC-A--AGGAGAGGATC-GATGCCTGATCC 1097
Query 1108 AGAATAAACTCTTGT-TT-TTGCA-AGATGACATTCAGAGATTTGACCTTCAAGATCTTC 1164
|| | || ||| | || || | || || ||||| ||||| || ||||||||||||
Sbjct 1098 AGGAGGAAGGCTTCTATTCGTG-AGGGACGATATTCAAAGATTCGATCTTCAAGATCTT- 1155
Query 1165 TT-AGAGCCTCTGCTGAAGTTCTTGGGAGTGGAAGC-TTTGGTGCTTCTTATAAAACTGG 1222
|| ||||| || |||||||||||||| || |||| | ||||||||||| || ||| | |
Sbjct 1156 TTGAGAGCTTCAGCTGAAGTTCTTGGTAGCGGAA-CATTTGGTGCTTCATACAAAGCAGC 1214
Query 1223 GATAAATAGCGGACAGACGCTGGTCGTGAAGAGGTATAAACATATGAACAATGTCGGAAG 1282
|||| ||| ||||| || |||| |||||||||||||||||||||||||||||||||||
Sbjct 1215 GATATCTAGTGGACAAACATTGGTTGTGAAGAGGTATAAACATATGAACAATGTCGGAAG 1274
Query 1283 AGAGGAGTTTCATGACCATATGAGACGGTTAGGGAGATTGAACCATCCAAATCTGTTGCC 1342
||| ||||||||||| ||||||||||||||||||||||| |||||||||||| | |||||
Sbjct 1275 AGATGAGTTTCATGAGCATATGAGACGGTTAGGGAGATTAAACCATCCAAATATATTGCC 1334
Query 1343 TATTGTGGCATACTATTACCGCAGAGAAGAGAAGCT-CTTGATCGCTGAGTTCATGCCAA 1401
| | || || ||||||||||| ||||| |||||||| || | || |||| || ||||| |
Sbjct 1335 TCTCGTTGCTTACTATTACCGTAGAGAGGAGAAGCTTCTAG-TCACTGAATTTATGCCCA 1393
Query 1402 ATC-GTAGCTTGGCAAGCCATCTTCACGCGAATCATTCTGTTGATCAACCTGGATTGGAT 1460
| | |||||||||||||||||||||| |||||| |||| | | ||||||||||
Sbjct 1394 A-CAGTAGCTTGGCAAGCCATCTTCATGCGAATAATTCCG-----C----TGGATTGGAT 1443
Query 1461 TGGCCAACAAGGGTAAAGATTATACAAGGAGTGGCTAAGGGTTTAGGTTACTTGTTCAAC 1520
||| |||| | ||||||| ||| ||||||| || ||||||||| ||||||||| ||
Sbjct 1444 TGGATAACACGTTTAAAGATCATAAAAGGAGTAGCAAAGGGTTTATCTTACTTGTTTGAC 1503
Query 1521 GAGCTAACAACCCTAACAATCCCTCACGGTCATCTCAAGTCATCGAACGTTGTATTGGAC 1580
||||| |||| |||||||||||||| |||||| | ||||||||||| |||| || |||
Sbjct 1504 GAGCTTCCAACACTAACAATCCCTCATGGTCATATGAAGTCATCGAATATTGTTTTAGAC 1563
Query 1581 GAATCATTCGAGCC-TCTCTTAACCGATTATGCACTAAGACCGGTGATGAACTCAGAGCA 1639
|| ||||||||||| | | ||||| ||||| || |||||||| |||||| |||||||||
Sbjct 1564 GATTCATTCGAGCCAT-TGTTAACAGATTACGCTCTAAGACCTATGATGAGCTCAGAGCA 1622
Query 1640 -GTCTCACAATCTA-ATGATCT-CATATAAATCACCAGAGTATAG-C-TT--AAAGGGAC 1692
| | || || || |||| | | || ||||| ||||||||||| | || ||||| ||
Sbjct 1623 CG-CACATAA-CTTCATGA-CAGCTTACAAATCGCCAGAGTATAGACCTTCGAAAGG-AC 1678
Query 1693 A--TC-TAACAAAAAAGACAGATGTTTGGTGCCTCGGGGTTTTGATCTTGGA-GCTATTA 1748
| || |||| || ||||||||||||||||| | || || ||||||||||| | | ||
Sbjct 1679 AAATCATAACGAAGAAGACAGATGTTTGGTGTTTTGGTGTGTTGATCTTGGAAGTT-TTG 1737
Query 1749 ACAGGTAGGTTTCCGGAGAATTATCT-AA-GCCAAGGGTACGATGCTAACATGAGCCTCG 1806
||||| || || || || ||||| || || || |||| || ||| |||||||||| || |
Sbjct 1738 ACAGGAAGATTCCCTGAAAATTA-CTTAACGC-AAGGTTATGATTCTAACATGAGTCTTG 1795
Query 1807 TAACTTGGGTCAGCAACATGGTTAAGGAGAAGAAAACGGGTGACGTGTTTGACAAGGAAA 1866
| |||||||| | | | |||||||||||||||||||| ||||||||||| ||||||||||
Sbjct 1796 TGACTTGGGTTAACGATATGGTTAAGGAGAAGAAAACAGGTGACGTGTTCGACAAGGAAA 1855
Query 1867 TGACTGGGAAGAAGAACTGCAAAGCAGAGATGCTAAACCTT-TTGAAAATCGGGTTGAGT 1925
||| ||||||||||| || ||||| || ||| | || || |||||||| || |||||
Sbjct 1856 TGAAAGGGAAGAAGAATTGTAAAGCGGAAATGATTAAT-TTGTTGAAAATTGGTTTGAGA 1914
Query 1926 TGTTGCgaagaagatgaagaaaggaggatggagatgagagatgcggtggagaagatagag 1985
|||||||||||||| ||||| ||||||||||| |||||||| | ||||||| | | |||
Sbjct 1915 TGTTGCGAAGAAGAAGAAGAGAGGAGGATGGATATGAGAGAAGTTGTGGAGATGGTTGAG 1974
Query 1986 aggttaaaagaaggagaaTTTGACA-ATGATTT 2017
| ||| | ||||||||||| ||| | |||||||
Sbjct 1975 ATGTTGAGAGAAGGAGAATCTGA-AGATGATTT 2006
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 110993404995
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5