BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg479628
Length=2203
Score E
Sequences producing significant alignments: (Bits) Value
AT3G21090.1 | Symbols: | ABC-2 type transporter family protein... 3533 0.0
AT1G51500.1 | Symbols: CER5, D3, ABCG12, WBC12, ATWBC12 | ABC-2... 1773 0.0
AT3G21080.1 | Symbols: | ABC transporter-related | chr3:738836... 268 1e-70
> AT3G21090.1 | Symbols: | ABC-2 type transporter family protein
| chr3:7391438-7395041 REVERSE LENGTH=2243
Length=2243
Score = 3533 bits (1913), Expect = 0.0
Identities = 2084/2166 (96%), Gaps = 13/2166 (1%)
Strand=Plus/Plus
Query 23 CTCTCTCTCTATATATAGCATTGTTATAGCTAGTTagagagagagagagagagaAACTAA 82
|||||| ||| | |||||||||||||||||||||| ||||||| | |||||||
Sbjct 52 CTCTCTTTCTCTCTATAGCATTGTTATAGCTAGTT--------AGAGAGACA-AAACTAA 102
Query 83 AAAC-AATGGAACTGGAAGGCTCGAGTAGTGGCCGGAGGCAGCTGCCGTCAAAGGTAGAG 141
|||| |||||||||||| |||||||||||||||||||||||||||||||||||| | |||
Sbjct 103 AAACAAATGGAACTGGAGGGCTCGAGTAGTGGCCGGAGGCAGCTGCCGTCAAAGTTGGAG 162
Query 142 ATGAGCCGTGGAGCGTATTTGGCGTGGGAAGACTTGACGGTGGTAATACCCAATTTCAGT 201
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 163 ATGAGCCGTGGAGCGTATTTGGCGTGGGAAGACTTGACGGTGGTAATACCCAATTTCAGT 222
Query 202 GATGGTCCAACCAGAAGGTTGCTTCAAAGGCTAAACGGTTATGCAGAACCGGGTCGGATC 261
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 223 GATGGTCCAACCAGAAGGTTGCTCCAAAGGCTAAACGGTTATGCAGAACCGGGTCGGATC 282
Query 262 ATGGCTATAATGGGTCCTTCCGGATCCGGAAAGTCCACTCTTCTTGACTCTCTTGCAGGT 321
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 283 ATGGCTATAATGGGTCCTTCCGGATCCGGAAAGTCCACTCTTCTTGACTCTCTTGCAGGT 342
Query 322 AGACTCGCAAGAAACGTGGTCATGACCGGTAATCTTCTATTAAACGGCAAGAAAGCTAGA 381
||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||
Sbjct 343 AGACTCGCAAGAAACGTGGTCATGACCGGTAATCTTCTACTGAACGGCAAGAAAGCTAGA 402
Query 382 CTAGACTACGGTCTCGTAGCATATGTGACACAAGAGGATATATTGCTGGGGACATTAACA 441
||||||||||||||||||||||||||||||||||||| ||||| |||||||| |||||
Sbjct 403 TTAGACTACGGTCTCGTAGCATATGTGACACAAGAGGACGTATTGTTGGGGACACTAACA 462
Query 442 GTGAGGGAGACAATAACATACTCAGCTCATTTGAGACTTCCAAGTGATATGTCTAAAGAG 501
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 463 GTGAGGGAGACAATAACATACTCAGCTCACTTGAGACTTCCAAGTGATATGTCTAAAGAG 522
Query 502 GAAGTGAGTGACATTGTGGAAGGCACAATCATGGAGCTTGGTCTTCAAGACTGTTCAGAC 561
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 523 GAAGTGAGTGACATCGTGGAAGGCACAATCATGGAGCTTGGTCTTCAAGACTGTTCAGAC 582
Query 562 AGAGTCATTGGAAACTGGCACGCAAGAGGAGTTAGTGGCGGTGAGAGGAAACGTGTCAGC 621
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 583 AGAGTCATTGGAAACTGGCACGCCAGAGGAGTTAGTGGCGGTGAGAGGAAACGTGTCAGC 642
Query 622 ATTGCTTTGGAGATCCTCACTCGTCCTCAAATCCTTTTTCTCGACGAACCCACAAGCGGT 681
||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||
Sbjct 643 ATTGCTTTGGAGATCCTCACTCGTCCTCAAATCCTTTTTCTCGACGAACCCACTAGTGGT 702
Query 682 TTGGACAGTGCTTCTGCGTTTTTCGTCATTCAGGCGCTTAGGAACATTGCACGCGATGGC 741
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 703 TTGGACAGTGCTTCTGCGTTTTTCGTTATTCAGGCGCTTAGGAACATTGCACGCGATGGC 762
Query 742 AGAACCGTAATTTCCTCGGTTCATCAGCCTAGCAGCGAGGTTTTTGCGCTATTTGATGAT 801
||||||||||| ||||||||||||||||| |||||||||||||||||||| || ||||||
Sbjct 763 AGAACCGTAATCTCCTCGGTTCATCAGCCCAGCAGCGAGGTTTTTGCGCTGTTCGATGAT 822
Query 802 CTTTTCTTGCTCTCGAGTGGTGAGTCTGTCTACTTTGGTGAAGCCAAGTCTGCTGTTGAG 861
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 823 CTTTTCTTGCTTTCGAGTGGTGAGTCTGTCTACTTTGGTGAAGCCAAGTCTGCTGTTGAG 882
Query 862 TTCTTTGCAGAATCAGGTTTTCCATGCCCGAAGAAAAGGAATCCTTCTGATCATTTTCTT 921
|||||||||||||| ||||| || ||||||||||| ||||||||||| |||||||||||
Sbjct 883 TTCTTTGCAGAATCGGGTTTCCCGTGCCCGAAGAAGAGGAATCCTTCCGATCATTTTCTG 942
Query 922 AGATGTATAAACTCAGACTTTGATACAGTCACAGCTACACTCAAAGGATCTCAGAGAATT 981
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 943 CGATGTATAAACTCGGACTTTGATACAGTCACAGCTACACTCAAAGGATCTCAGAGAATT 1002
Query 982 CAGGAAACACCAGCTACATCGGATCCTCTGATGAATCTAGCAACATCTGTGATCAAAGCA 1041
|||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||
Sbjct 1003 CAGGAAACACCAGCTACATCAGATCCTCTAATGAATCTAGCAACATCTGTGATCAAAGCA 1062
Query 1042 AGGCTTGTTGAGAATTACAAGCGTTCAAAGTATGCGAAATCCGCAAAATCTAGGATTCGA 1101
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1063 AGGCTTGTTGAGAATTACAAGCGTTCAAAGTATGCGAAATCCGCAAAATCTAGGATTCGA 1122
Query 1102 GAACTATCTAACATTGAAGGGCTCGAGATGGAAATAAGAAAAGGAAGTGAAGCGAGCTGG 1161
|||||||||||||| |||||||||||||||||||||||||||||||||||||| | ||||
Sbjct 1123 GAACTATCTAACATCGAAGGGCTCGAGATGGAAATAAGAAAAGGAAGTGAAGCAACCTGG 1182
Query 1162 TGGAAACAACTTAGGACATTAACAGCAAGATCATTCATAAACATGTGTCGTGATGTCGGT 1221
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1183 TGGAAACAACTTAGGACATTAACAGCAAGATCATTCATAAACATGTGTCGTGATGTCGGT 1242
Query 1222 TACTATTGGACACGAATAATAAGCTACATTGTTGTTTCTATAAGTGTAGGAACCATCTTC 1281
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 1243 TACTATTGGACACGAATAATAAGCTACATTGTTGTTTCTATAAGCGTAGGAACCATCTTC 1302
Query 1282 TACGACGTTGGCTATAGCTACACATCAATCTTAGCCCGAGTTTCTTGTGGCGGATTCATC 1341
|||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||
Sbjct 1303 TACGACGTTGGCTATAGCTACACATCAATCTTAGCCCGTGTTTCTTGCGGCGGATTCATC 1362
Query 1342 ACTGGTTTCATGACTTTCATGTCCATTGGAGGCTTCCCTTCTTTCCTCGAAGAAATGAAG 1401
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1363 ACTGGTTTCATGACTTTCATGTCCATTGGAGGCTTCCCTTCTTTCCTCGAAGAAATGAAG 1422
Query 1402 GTGTTCTATAAAGAGAGGCTGAGTGGATACTATGGCGTGTCAGTTTATATCCTCTCGAAT 1461
||||||||||| |||||||| ||||||||||| ||||| || ||||||||||||||||||
Sbjct 1423 GTGTTCTATAAGGAGAGGCTAAGTGGATACTACGGCGTTTCGGTTTATATCCTCTCGAAT 1482
Query 1462 TACATCTCTTCTTTCCCGTTCTTGGTTGCGATATCGGTTATCACGGGAACTATTACTTAC 1521
||||||||||||||||| |||||||||||||| ||||||||||| |||||||||||||||
Sbjct 1483 TACATCTCTTCTTTCCCTTTCTTGGTTGCGATTTCGGTTATCACAGGAACTATTACTTAC 1542
Query 1522 AACTTGGTGAAGTTTCGTCCCGGGTTCTCGCATTACGCTTTCTTCTGTCTCAACATCTTC 1581
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1543 AACTTGGTGAAGTTTCGTCCCGGGTTCTCGCATTACGCTTTCTTCTGTCTCAACATCTTC 1602
Query 1582 TTCTCAGTTTCTGTGATAGAGAGTCTCATGATGGTTGTGGCTTTTCTTTTTCCAAATTTC 1641
||||||||||| ||||||||||||||||||||||||||||||| | || ||||||| |||
Sbjct 1603 TTCTCAGTTTCCGTGATAGAGAGTCTCATGATGGTTGTGGCTTCTGTTGTTCCAAACTTC 1662
Query 1642 TTGATGGGTCTTATCACTGGAGCTGGCCTCATTGGAATCATCATGATGACTTCTGGATTC 1701
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1663 TTGATGGGTCTTATCACTGGAGCTGGCCTCATTGGAATCATCATGATGACTTCTGGATTC 1722
Query 1702 TTCCGTCTTCTTCCTGATCTTCCCAAAATCTTTTGGCGTTACCCGGTTTCTTACATAAGC 1761
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1723 TTCCGTCTTCTTCCTGATCTTCCCAAAATCTTTTGGCGTTACCCGGTTTCTTACATAAGC 1782
Query 1762 TACGGTTCTTGGGCTATCCAGGGAGGGTACAAGAACGATTTTCTAGGGCTAGAGTTCGAG 1821
||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||
Sbjct 1783 TACGGTTCTTGGGCTATCCAGGGAGGGTACAAGAATGACTTTCTAGGGCTAGAGTTCGAG 1842
Query 1822 CCTAT-GTTCCCGGGTGAGCCGAAAATGACAGGAGAAGAAGTGATAGAGAAGGTATTTGG 1880
|| || |||||||||||||||||||||||||||||| ||||||||||||||||| |||||
Sbjct 1843 CC-ATTGTTCCCGGGTGAGCCGAAAATGACAGGAGAGGAAGTGATAGAGAAGGTCTTTGG 1901
Query 1881 AGTAAAGGTGACATATTCAAAATGGTGGGATTTAGCTGCGGTCGTAGCAATCCTTGTGTG 1940
||| |||||||||||||||||||||||||| ||||||||||| |||||||||||||||||
Sbjct 1902 AGTGAAGGTGACATATTCAAAATGGTGGGACTTAGCTGCGGTAGTAGCAATCCTTGTGTG 1961
Query 1941 TTACAGGCTTCTCTTCTTCGTGGTCCTAAAGTTGAGGGAGAGAGCAGGACCGGCTTTGAA 2000
|||||||||||||||||||||||| |||||| ||||||||||||||||||| ||||||||
Sbjct 1962 TTACAGGCTTCTCTTCTTCGTGGTTCTAAAGCTGAGGGAGAGAGCAGGACCTGCTTTGAA 2021
Query 2001 GGCGATTCAGGCAAAAAGAACGATGAGGAATCTCGATAGGAGACCTTCTTTCAAGAGAAT 2060
|||||||||||| |||||||||||||||||||| ||||||||||||||||| ||||||||
Sbjct 2022 GGCGATTCAGGCGAAAAGAACGATGAGGAATCTTGATAGGAGACCTTCTTTTAAGAGAAT 2081
Query 2061 GCCTTCTCTGTCTCTTTCACTGTCGTCAATGTCTTCAAGGAGACACCAACCTCTCCGCTC 2120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2082 GCCTTCTCTGTCTCTTTCACTGTCGTCAATGTCTTCAAGGAGACACCAACCTCTCCGCTC 2141
Query 2121 ACTTTCTTCACAAGAAGGCCTTAACTCTCCTATCCACTACTAAAAGACTTA-TATAATGT 2179
||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 2142 ACTTTCTTCTCAAGAAGGCCTTAACTCTCCTATCCACTACTAAAAGACTTAATATAATGT 2201
Query 2180 ATGCAT 2185
||||||
Sbjct 2202 ATGCAT 2207
> AT1G51500.1 | Symbols: CER5, D3, ABCG12, WBC12, ATWBC12 | ABC-2
type transporter family protein | chr1:19097797-19101080
REVERSE LENGTH=2342
Length=2342
Score = 1773 bits (960), Expect = 0.0
Identities = 1696/2046 (83%), Gaps = 72/2046 (4%)
Strand=Plus/Plus
Query 138 AGAGA-TGAGCCGTGGAGCGTATTTGGCGTGGGAAGACTTGACGGTGGTAATACCCAA-T 195
||||| || ||||||| ||||| |||||||||||||| ||||||||||| ||||| || |
Sbjct 156 AGAGATTG-GCCGTGGGGCGTACTTGGCGTGGGAAGATTTGACGGTGGTTATACCAAACT 214
Query 196 TTCAGTGATGGTCCAAC-CAGAAGGTTGCTTCAAAGG-CTAAACGGTTATGCAGAACCGG 253
|| |||| |||||| || | |||| |||| || | || |||||||| |||| ||||| |
Sbjct 215 TT-AGTGGTGGTCCGACTC-GAAGATTGC-TCGATGGATTAAACGGTCATGCTGAACCAG 271
Query 254 GTCGGATCATGGCTATAATGGGTCCTTCCGGATCCGGAAAGTCCACTCTTCTTGACTCTC 313
||||||| ||||| || |||||||||||||||||||| |||||||| |||||||| ||||
Sbjct 272 GTCGGATTATGGCCATTATGGGTCCTTCCGGATCCGGCAAGTCCACGCTTCTTGATTCTC 331
Query 314 TTGCAGGTAGACTCGCAAGAAACGTGGTCATGACCGGTAATCTTCTATTAAACGGCAAGA 373
| |||||||||||||||||||||||| | |||||||||||||||||||| ||||| ||||
Sbjct 332 TCGCAGGTAGACTCGCAAGAAACGTGATTATGACCGGTAATCTTCTATTGAACGGAAAGA 391
Query 374 AAGCTAGACTAGACTACGGTCTCGTAGCATATGTGACACAAGAGGATATATTGCTGGGGA 433
| || |||||||||||||||||||| || ||||| ||||||||||| || ||| |||| |
Sbjct 392 AGGCAAGACTAGACTACGGTCTCGTCGCTTATGTAACACAAGAGGACATTTTGATGGGAA 451
Query 434 CATTAACAGTGAGGGAGACAATAACATACTCAGCTCATTTGA-GACT-TCCAAGTGATAT 491
|| |||| |||||||||||||||||||||||||||||| | | | || | |||||||| |
Sbjct 452 CACTAACGGTGAGGGAGACAATAACATACTCAGCTCATCT-ACGGCTAT-CAAGTGATTT 509
Query 492 GTCTAAAGAGGAAGTGAGTGACATTGTGGAAGGCACAATCATGGAGCTTGGTCTTCAAGA 551
| | ||||| ||||| | |||||||| ||||| |||||||| || ||||||||||||||
Sbjct 510 GACCAAAGAAGAAGTCAACGACATTGTTGAAGGAACAATCATTGAACTTGGTCTTCAAGA 569
Query 552 CTGTTCAGACAGAGTCATTGGAAACTGGCACGCAAGAGGAGTTAGTGGCGGTGAGAGGAA 611
||| ||||||||||||| || || ||||| | |||||||| |||||||| ||||||||
Sbjct 570 TTGTGCAGACAGAGTCATAGGTAATTGGCATTCTAGAGGAGTGAGTGGCGGCGAGAGGAA 629
Query 612 ACGTGTCAGCATTGCTTTGGAGATCCTCACTCGTCCTCAAATCCTT-TTTCTCGACGAAC 670
||| |||||| |||| || |||||| | || || || ||||| || ||||| || ||||
Sbjct 630 ACGCGTCAGCGTTGCGTTAGAGATCTTAACGCGACCGCAAAT-TTTGTTTCTTGATGAAC 688
Query 671 CCACAAGCGGTTTGGACAGTGCTTCTGCGTTT-TTCGTCATTCAGGCGCTTAGGAACATT 729
| || || |||||||||||||||||||| ||| || || ||||| ||||| ||||| ||
Sbjct 689 CTACTAGTGGTTTGGACAGTGCTTCTGC-TTTCTTTGTGATTCAAGCGCTAAGGAATATC 747
Query 730 GCACGCGA---TGGCAGAACCGTAATTTCCTCGGTTCATCAGCCTAGCAGCGAGGTTTTT 786
|| || || ||| |||||||| |||| ||| ||||||| ||||| ||||| ||||||
Sbjct 748 GCTCGAGATGGTGGTAGAACCGTTGTTTCATCGATTCATCAACCTAGTAGCGAAGTTTTT 807
Query 787 GCGCTATTTGATGATCTTTTCTTGCTCTCGAGTGGTGAGTCTGTCTACTTTGGTGAAGCC 846
|| || |||||||||||||| |||||||| ||||||||| |||| || ||||||||| ||
Sbjct 808 GCTCTCTTTGATGATCTTTTTTTGCTCTCTAGTGGTGAGACTGTTTATTTTGGTGAATCC 867
Query 847 AAGTCTGCTGTTGAGTTCTTTGCAGAATCAGGTTTTCCATGCCCGAAGAAAAGGAATCCT 906
|||| |||||||||||||||||| ||| | || ||||| |||||||||||| ||||||||
Sbjct 868 AAGTTTGCTGTTGAGTTCTTTGCTGAAGCGGGGTTTCCTTGCCCGAAGAAACGGAATCCT 927
Query 907 TCTGATCATTTTCTTAGATGTATAAACTCAGACTTTGATACAGTCACAGCTACACTCAAA 966
||||||||||| || |||||||| ||||||||||||||||| || |||||||||||||||
Sbjct 928 TCTGATCATTTCCTAAGATGTATCAACTCAGACTTTGATACCGTTACAGCTACACTCAAA 987
Query 967 GGATCTCAGAGAATTCAGGAAACACCAGCTACATCGGATCCTCTGATGAATCTAGCAACA 1026
|||||||| || |||| ||| |||||||||||||| |||||| |||||||||||||||||
Sbjct 988 GGATCTCAAAGGATTCGGGAGACACCAGCTACATCAGATCCTTTGATGAATCTAGCAACA 1047
Query 1027 TCTGTGATCAAAGCAAGGCTTGTTGAGAATTACAAG-CGTTCAAAGTATGCGAAATCCGC 1085
|||| ||||||||| ||||||||||||||||| | |||||| || || ||||| ||
Sbjct 1048 TCTGAGATCAAAGCTAGGCTTGTTGAGAATTA-TCGTCGTTCAGTCTACGCTAAATCTGC 1106
Query 1086 AAAATCTAGGATTCGAGAACTATCTAACATTGAAGGGC-TC--GAGATGGAAATAAGAAA 1142
||||||| | || || ||| || ||| ||||||||| | || | ||||||| | |||||
Sbjct 1107 AAAATCTCGCATCCGTGAATTAGCTAGCATTGAAGGACATCATGGGATGGAAGTGAGAAA 1166
Query 1143 AGGAAGTGAAGCGAGC-TGGTGGAAACAACTTAGGACATTAACAGCA-AGATCATTCATA 1200
||||| ||||||| | |||| || || || || || || ||| | |||||||| |
Sbjct 1167 GGGAAGCGAAGCGA-CGTGGTTTAAGCAGCTAAGAACTTTGACA-AAGAGATCATTTGTG 1224
Query 1201 AACATGTGTCGTGATGTCGGTTACTATTGGACACGAATAATAAGCTACATTGTTGTTTCT 1260
|||||||| || ||| | || ||||||||| || |||| | | ||| ||||| || ||
Sbjct 1225 AACATGTGCCGCGATATTGGATACTATTGGTCAAGAATTGTGATCTATATTGTGGTATC- 1283
Query 1261 A-TAAGTGTAGGAACCATCTTCTACGACGTTGG-CTATAGCTACACATCAATCTTAGCCC 1318
| | |||| || || ||||| ||||| || || | ||||||||||||| ||||| || |
Sbjct 1284 ATTCTGTGTTGGGACAATCTTTTACGATGTAGGAC-ATAGCTACACATCGATCTTGGCTC 1342
Query 1319 GAGTTTCTTGTGGCGGATTCATCACTGGTTTCATGACTTTCATGTCCATTGGAGGCTTCC 1378
| ||||||||||| |||||||| || ||||||||||||||||||||||||||||| || |
Sbjct 1343 GGGTTTCTTGTGGTGGATTCATTACCGGTTTCATGACTTTCATGTCCATTGGAGGGTTTC 1402
Query 1379 CTTCTTTCCTCGAAGAAATGAAGGTGTTCTATAAAGAGAGGCTGAGTGGATACTATGGCG 1438
|||||||| | ||||||||||| ||||||||||||||||| ||||||| ||||| ||||
Sbjct 1403 CTTCTTTCATTGAAGAAATGAAAGTGTTCTATAAAGAGAGATTGAGTGGTTACTACGGCG 1462
Query 1439 TGTCAGTTTATATCCTCTCGAATTACATCTCTTCTTTCCCGTTCTTGGTTGCGATAT-CG 1497
| || ||||||||| | ||||||||| |||||||||||||||||||||| || || | ||
Sbjct 1463 TTTCGGTTTATATCATATCGAATTACGTCTCTTCTTTCCCGTTCTTGGTAGCCAT-TGCG 1521
Query 1498 GTTATCAC-GGGAACTATTACTTACAACTTGGTGAAGTTTCGTCCCGGGT-TCTCGCATT 1555
| ||||| ||| | ||||||||||||| ||||||| || ||| || ||| |||||||||
Sbjct 1522 CTCATCACAGGG-AGTATTACTTACAACATGGTGAAATTCCGT-CCTGGTGTCTCGCATT 1579
Query 1556 ACGCTTTCTTCTGTCTCAACATCTTCTTCTCAGTTTCTGTGATAGAGAGTCTCATGATGG 1615
|||||||||||||||||||| |||||||| || || || || ||||||||||||||||
Sbjct 1580 GGGCTTTCTTCTGTCTCAACATATTCTTCTCTGTCTCCGTCATTGAGAGTCTCATGATGG 1639
Query 1616 TTGTGGCTTTTCTTTTTCCAAATTTCTTGATGGGTCTTATCACTGGAGCTGGCCTCATTG 1675
||||||||| |||| |||| ||||||||||||||||||||||| ||||||||| ||||||
Sbjct 1640 TTGTGGCTTCTCTTGTTCCGAATTTCTTGATGGGTCTTATCACAGGAGCTGGCATCATTG 1699
Query 1676 GAATCATCATGATGACTTCTGGATTCTTCCGTCTT-CTTCCTGATCTTCCCAAAA-TCTT 1733
|||||||||||||||||||||||||||||||| || ||||| ||||| || ||| | ||
Sbjct 1700 GAATCATCATGATGACTTCTGGATTCTTCCGT-TTGCTTCCCGATCTGCC-AAAGGT-TT 1756
Query 1734 T-TGGCGTTACCCGGTTTC-TTACATAAGCTACGGTTCTTGGGCTATCCAGGGAGGGTAC 1791
| ||||| |||||| |||| || ||| || || |||||||||||||| ||||||| |||
Sbjct 1757 TCTGGCGCTACCCGATTTCCTT-CATGAGTTATGGTTCTTGGGCTATTCAGGGAGCATAC 1815
Query 1792 AAGAACGATTTTCTAGGGCTAGAGTTCGAGCCTATGTTCCCGGGTGAGCCGAAA-ATGAC 1850
||||| |||||||| || |||||||| || || ||||| |||| || || ||| |||||
Sbjct 1816 AAGAATGATTTTCTTGGTCTAGAGTTTGACCCGATGTTTGCGGGGGAACC-AAAGATGAC 1874
Query 1851 AGGAGAAG-AAGTGATAGAGAAGGTATTTGGAGTA-AAGGTGACATATTCAAAATGGTGG 1908
|||||| | |||||||| | ||| |||||||||| ||| | ||| |||| || ||||||
Sbjct 1875 AGGAGA-GCAAGTGATAAACAAGATATTTGGAGTGCAAG-TCACACATTCTAAGTGGTGG 1932
Query 1909 GATTTAGCTGCGGTCGTAGCA-ATCCTTGTGTGTTACAGGC-TTCTCTTCTTCGTGGTCC 1966
|| ||| | ||| |||| | ||||||||||||||| | | |||| || ||| | |||
Sbjct 1933 GACTTATCAGCGATCGT-GTTGATCCTTGTGTGTTACCG-CATTCTATTTTTCATAGTCT 1990
Query 1967 TAAAG-TTGAGGGAGAGAGCAG-GACCGGCTTTGAAGGCGATTCAGGCAAAAAGAACGAT 2024
| ||| || ||| ||||||||| | ||||||||||||||||| || ||||| |||||||
Sbjct 1991 TGAAGCTTAAGG-AGAGAGCAGAG-CCGGCTTTGAAGGCGATACAAGCAAAGCGAACGAT 2048
Query 2025 GAGGAATCTCGATAGGAGACCTTCTTTCAAGAGAATGCCTTCTCTGTCTCTTTCACTGTC 2084
|| || |||| | | ||||||||||||||||| || | ||| | ||||| ||| | |
Sbjct 2049 GAAGAGTCTCAAAAAGAGACCTTCTTTCAAGA-AA-G--TTC-CA-TCTCTATCA-TCAC 2101
Query 2085 GTCAATGTCTTCAAGGAGACACCAACCTCTCCGCTCACTTTCTTCACAAGAAGGCCTTAA 2144
| | | |||||||||||||||||||||| | ||||||||||| |||||||| ||||
Sbjct 2102 -T-A-T--CTTCAAGGAGACACCAACCTCTACATTCACTTTCTTCTCAAGAAGGTCTTAC 2156
Query 2145 CTCTCC 2150
||||||
Sbjct 2157 CTCTCC 2162
> AT3G21080.1 | Symbols: | ABC transporter-related | chr3:7388367-7389974
REVERSE LENGTH=1054
Length=1054
Score = 268 bits (145), Expect = 1e-70
Identities = 353/447 (79%), Gaps = 39/447 (9%)
Strand=Plus/Plus
Query 1591 TCTGTGATAGAGAGTCTCATGATGGTTGTGGCTTTTC-TTT-TTCCAAATTTCTTGA-TG 1647
||||| ||||||| |||||||||||||||||| ||| ||| ||||||| ||||||| |
Sbjct 476 TCTGTAATAGAGATTCTCATGATGGTTGTGGC--TTCGTTTGTTCCAAACTTCTTGACT- 532
Query 1648 GGTCTTATCACTGGAGCTGGCCTCATTGGAATCATCATGATGACTTCTGGATTCTTCCGT 1707
|||||| |||||||||||||||| |||||||||||||||| | |||||||||||| ||||
Sbjct 533 GGTCTTTTCACTGGAGCTGGCCTTATTGGAATCATCATGACGTCTTCTGGATTCTCCCGT 592
Query 1708 CTTCTTCCTGATCTTCCCAAAATCTTTTGGCGTT-----A---CC--CG-G-TTTCTTAC 1755
||||||||||||||||||||||||||||| |||| | || | | ||||||||
Sbjct 593 CTTCTTCCTGATCTTCCCAAAATCTTTTGCCGTTTCTCGATTTCCTACACGATTTCTTAC 652
Query 1756 ATAAGCTACGGTTCTTGGGCTATCCAGGGAGGGTACAAGAACGATTTTCTAGGGCTAGAG 1815
|| | | || |||||||| ||| || |||| |||| ||| ||||||| ||||
Sbjct 653 ATGATTTTTGGATCTTGGGCCATCAAGCTAGGGCACAACAACAATTTTCTCGGGCC---- 708
Query 1816 TTCGAGCCTATGTTCCCGGGTGAGCCGAAAATGACAGGAGAAGAAGTGA-TAGAGAAGGT 1874
| | | | | || || |||||||||||||||||||||||| ||| || ||| |
Sbjct 709 T-CTATC--A----CC-GGACGAGCCGAAAATGACAGGAGAAGAAATGAATAT-GAATGA 759
Query 1875 ATTTGGAGTAAAGGTGACATATTCAAAATGGTGGGATTTAGCTGCGGTCGT-A--GCAAT 1931
|||||||||||||||||| ||||| |||||||| || ||| | | || | |||||
Sbjct 760 ATTTGGAGTAAAGGTGACGCATTCAGGATGGTGGGGCTTCCCTGAGATTGTGATAGCAAT 819
Query 1932 CCTTGTGTGTTACA-GGCTTCTCTTCTTCGTGGTCCTAAAGTTGAGGGAGAGAGCAGGAC 1990
|||||||||| || ||||||| |||||||||| || |||| ||| |||||||||| |||
Sbjct 820 CCTTGTGTGT-ACCTGGCTTCTTTTCTTCGTGGCCCAAAAGCTGAAGGAGAGAGCACGAC 878
Query 1991 CGGCTTTGAAGGC-GATTCAGGCAAAA 2016
| |||| |||| ||||||||| |||
Sbjct 879 CAGCTTC-AAGGGTGATTCAGGCGAAA 904
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 109286586465
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5