BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg479639
Length=1668
Score E
Sequences producing significant alignments: (Bits) Value
AT3G21190.1 | Symbols: | O-fucosyltransferase family protein |... 2628 0.0
AT1G51630.1 | Symbols: | O-fucosyltransferase family protein |... 1140 0.0
> AT3G21190.1 | Symbols: | O-fucosyltransferase family protein
| chr3:7432299-7434665 REVERSE LENGTH=1671
Length=1671
Score = 2628 bits (1423), Expect = 0.0
Identities = 1596/1678 (95%), Gaps = 17/1678 (1%)
Strand=Plus/Plus
Query 1 AGCTTGTCTCTATCTGCCCCACAAACAACACCTCTCTTTGCTGGACTCTCTTTTTC-TTC 59
|||||||||||||||||||||| | |||||||||||||| ||||||||||||||| |||
Sbjct 1 AGCTTGTCTCTATCTGCCCCAC--A-AACACCTCTCTTTGTTGGACTCTCTTTTTCTTTC 57
Query 60 --CTTTCCTTGAGTCTATTTTAACTCAGAATCGTCTG--CTTTTCTG-TAGAGAG-AAGG 113
||| |||| ||||||||||||||||||| | |||| |||| || ||||||| ||||
Sbjct 58 TTCTTCCCTT-AGTCTATTTTAACTCAGAAACCTCTGTTTTTTTTTGTTAGAGAGAAAGG 116
Query 114 TAAGAAATGGGTGTTGATTTGAGGCAAGTAGTGGCTGGTATTCTCACCATTACCATGTTT 173
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 117 TAAGAAATGGGTGTTGATTTGAGGCAAGTAGTTGCTGGTATTCTCACCATTACCATGTTT 176
Query 174 GTTATGCTTGGACAGATGCTTCATAGAGATTACTTTGATTCTCTTCAGGAGAAAGCTCAG 233
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 177 GTGATGCTTGGACAGATGCTTCATAGAGATTACTTTGATTCTCTTCAGGAGAAAGCTCAG 236
Query 234 GGAGATGCACAAGATATTGAATTTGAAGGATCTAAAGTCTCTGTGAAAGATGGTCTTGTC 293
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 237 GGAGATGCACAAGATATTGAATTTGAAGGATCTAAAGTCTCTGTGAAAGATGGTCTTGTC 296
Query 294 GGAACCGTTGAAGGCAGTAAGGGACTTTGGATGGAGGATAACACTGATCTTAATCCTTGT 353
|||||||||||||||||||| |||||||||||||| |||||||||||||||| |||||||
Sbjct 297 GGAACCGTTGAAGGCAGTAAAGGACTTTGGATGGAAGATAACACTGATCTTACTCCTTGT 356
Query 354 TGGCCAACATTACTATCAGATGAAGCGGTATCATCGAAAGGGTATGTTACATTCTCACTA 413
||||||||||||||||| ||||| || ||||||||||||||||||||||||||||||||
Sbjct 357 TGGCCAACATTACTATCTGATGACGCTGTATCATCGAAAGGGTATGTTACATTCTCACTT 416
Query 414 ACCAATGGTCCTGAGTACCATATCTCTCAGATTTCTGATGCTGTAATGGTGGCAAAGCAT 473
|||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||
Sbjct 417 ACCAATGGTCCTGAGTACCATATCTCTCAGATCACTGATGCTGTAATGGTGGCTAAGCAT 476
Query 474 CTTGGAGCAACTCTAGTACTTCCTGATATAAGAGGAAGCAAACCTGGTGATGAAAGGGAT 533
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 477 CTTGGAGCAACTCTAGTACTTCCTGATATAAGAGGAAGCAAACCTGGTGATGAAAGGAAT 536
Query 534 TTTGAAGATATCTATGATGTGGATAAACTAATTAAGAGCTTGGAAAATGTTGTTAAAGTT 593
||||||||||||||||||| |||||| || ||||| |||||||||||||| |||||||||
Sbjct 537 TTTGAAGATATCTATGATGCGGATAAGCTGATTAAAAGCTTGGAAAATGTCGTTAAAGTT 596
Query 594 GTGAAACAATTGCCTGAAGAAGTTTCTCTAAGGAACATGGCCATTGTGAAGGTCCCTACC 653
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 597 GTGAAAAAATTGCCTGAAGAAGTTTCTCTAAGGAACATGGCCATTGTGAAGGTCCCTACC 656
Query 654 AGAGTTACAGAAGATTACATTAAGGAGCACATTGATCCCATTTTTAAATCGAAAGGAAAC 713
||||||||||||||||||||||| ||||||||||||||||| |||||||| |||||||||
Sbjct 657 AGAGTTACAGAAGATTACATTAAAGAGCACATTGATCCCATCTTTAAATCTAAAGGAAAC 716
Query 714 ATTCGAGTCGCATCATACTTCCCTTCTGTAAACTTGAGGAAATCCTCACAAGATGGCGAA 773
|||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 717 ATTCGAGTTGCATCATACTTCCCTTCTGTAAACTTGAGAAAATCCTCACAAGATGGCGAA 776
Query 774 ACTGATCCTGTAGCATGTTTAGCAATGTTTGGGTCATTGGAGCTGCAACCCGAAGTGAAT 833
|||||||||||||| |||||||||||||||||||| |||||| ||||||| |||||||||
Sbjct 777 ACTGATCCTGTAGCCTGTTTAGCAATGTTTGGGTCTTTGGAGTTGCAACCTGAAGTGAAT 836
Query 834 GCAGTGGCTGAATCAATGGTTGAGCGGTTGAGGACTCATAGCCGGAAATCAGGTGGGCGT 893
|||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| |||
Sbjct 837 GCAGTGGCTGAATCAATGGTTGAGCGGTTGAGGACTCATAGCCGTAAATCCGGTGGCCGT 896
Query 894 TTCATAGCAGTAGACCTTAGAATCGACATACTTGAGAAGAAAAATTGTCATACCACTGGT 953
||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||
Sbjct 897 TTCATAGCAGTAGACCTTAGAATCGACATACTTGAGAAGAAAAATTGCCATACAACTGGT 956
Query 954 GTAGTAGGGTCCAAGACATGTTACAATGCGCAAGAGATTGCTTTGTTCTTGAGGAAA-CT 1012
|||||||||||||||||||||||||| || |||||||||||||| |||||||| ||| ||
Sbjct 957 GTAGTAGGGTCCAAGACATGTTACAACGCTCAAGAGATTGCTTTATTCTTGAG-AAAGCT 1015
Query 1013 TGGATTTGCCAGCGACACAACTATCTATCTGACTCAGCCAAGATGGGACAGTAGCCTCAA 1072
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1016 TGGATTTGCCAGCGACACAACTATCTATCTGACTCAGCCAAGATGGGACAGTAGCCTCAA 1075
Query 1073 TATCCTTAAGGATATCTTCCCGAAAACATTCACAAAGGAGGCAATAATGCCGGCAAGTAA 1132
||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||
Sbjct 1076 TATCCTTAAGGATATCTTCCCAAAAACATTCACTAAGGAGGCAATAATGCCGGCAAGTAA 1135
Query 1133 GAGATCGAAGTACCTTGAATCAGAGAGTTCTGAGTACGAAAATGTTATCGACTTCTATAT 1192
|||||| |||||||||||||||| |||||| |||||||||||||||||||||||||| ||
Sbjct 1136 GAGATCAAAGTACCTTGAATCAGTGAGTTCCGAGTACGAAAATGTTATCGACTTCTACAT 1195
Query 1193 AAGCTCAAGAAGCGATGTCTTTGTTCCAGCCATATCCGGTCTGTTTTACGCAAACACCGT 1252
||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||
Sbjct 1196 AAGCTCAAGAAGCGATGTCTTTGTTCCAGCCATCTCCGGTCTGTTTTATGCAAACACCGT 1255
Query 1253 TGGCAAAAGGATAGCTTTAGGTAAGCCTCAAGTGCTAGTTCCAGCAGAAATCTCAGAGAT 1312
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 1256 TGGCAAAAGGATAGCTTTAGGTAAGCCTCAAGTGTTAGTTCCAGCAGAAATCTCAGAGAC 1315
Query 1313 ATCTGGCCGTGCTACAGATTTCATCTCTCCGTACATTTCAAAGAAGAATCACTTGGCTTA 1372
|||||||| ||||||||||||||||||||| ||||| ||||||||||| || ||||||||
Sbjct 1316 ATCTGGCCTTGCTACAGATTTCATCTCTCCATACATCTCAAAGAAGAACCATTTGGCTTA 1375
Query 1373 TTCATGCTTTTGCTGACCTTCTCGCATTTCTAAAGTAATCTCCACGCATACTTCC-TCGG 1431
||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||
Sbjct 1376 TTCATGCTTTTGCTGACCTTCTCGCATTTCTAAAGTAATCTCCACGCATACTTCCAT-GG 1434
Query 1432 AAGGGACTTCTCAGTTTTCATCAAGTGTAAGCAatttaattatttt-cttgtttttattt 1490
||||| |||||||||||||||||||||||||||||||||||||||| |||||||||| ||
Sbjct 1435 AAGGGCCTTCTCAGTTTTCATCAAGTGTAAGCAATTTAATTATTTTTCTTGTTTTTAATT 1494
Query 1491 tgtaagtttgtttcaatatatgttggttttttgGGGCGAGTGAGATTTACAGTTTGAATC 1550
|||||||||||||||||||| ||||||||||| |||| |||||| |||||||||||||||
Sbjct 1495 TGTAAGTTTGTTTCAATATAAGTTGGTTTTTTTGGGC-AGTGAGGTTTACAGTTTGAATC 1553
Query 1551 TGTTGGGTCATAGCTTTTGCATTCTATAAATTTTGCTCTATAGTAAGAAACACATAAATT 1610
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1554 TGTTGGCTCATAGCTTTTGCATTCTATAAATTTTGCTCTATAGTAAGAAACACATATATT 1613
Query 1611 GTTTGTAAGATTGATTTTAGTGTTGAGGGTTTCTAATGAAGGAAGAACCATGTGAACT 1668
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 1614 GTTTGTAAGATTGATTTTAGTGTTGAGGGTTTCTATTGAAGGAAGAACCATGTGAACT 1671
> AT1G51630.1 | Symbols: | O-fucosyltransferase family protein
| chr1:19141973-19144294 REVERSE LENGTH=1652
Length=1652
Score = 1140 bits (617), Expect = 0.0
Identities = 1080/1300 (83%), Gaps = 45/1300 (3%)
Strand=Plus/Plus
Query 120 ATGGGTGTTGATTTGAGGCAAGTAGTGGCTGGTATTCTCACCATTACCATGTTTGTTATG 179
|||||||| |||||||||||||| |||||||| || |||||||||||||||||||| |||
Sbjct 213 ATGGGTGTGGATTTGAGGCAAGTGGTGGCTGGAATACTCACCATTACCATGTTTGTGATG 272
Query 180 CTTGGACAGATGCTTCATAGAGATTACTTTGATTCTCTTCAGGAGAAAGCTCAGGGAGAT 239
|||||||| |||||||||||||||||||||||| || |||||||||||| ||| ||||||
Sbjct 273 CTTGGACAAATGCTTCATAGAGATTACTTTGATGCTGTTCAGGAGAAAGTTCAAGGAGAT 332
Query 240 GCACAAGATATTGAATTTGAAGGATCTAAAGTCTCTG-TGAAAGATGGTCTTGTCGGAAC 298
||||| ||||||||||| | ||||| ||||| ||| || ||||||| ||||| || |
Sbjct 333 GCACATGATATTGAATTCCATGGATCAAAAGTAGCTGTTG-AAGATGGACTTGTTAGAGC 391
Query 299 CGTTGAAGGC----AGT-AAGGGACTTTGGATGGAGGATA-ACACTGATCTTAATCCTTG 352
| ||| |||| | | ||||| | ||||||||| |||| || ||| || || |||||
Sbjct 392 CTTTG-AGGCTGGGACTAAAGGG-CCTTGGATGGAAGATAGTCA-TGAACTCAAACCTTG 448
Query 353 TTGGCCAACATTACT--ATCAGATGAAGCGGTATCATCGAAAGGG-TATGTTACATTCTC 409
|||| | | ||| || ||| |||||||||||||| || |||||| || |||||||||||
Sbjct 449 TTGGTC-A-ATTTCTCAATCTGATGAAGCGGTATCGTC-AAAGGGTTACGTTACATTCTC 505
Query 410 AC-TAACCAATGGTCCTGAGTACCATATCTCTCAGATTTCTGATGCTGTAATGGTGGCAA 468
| |||| ||||||||||| |||||| ||||||||||| ||||||| || |||||||| |
Sbjct 506 -CTTAACAAATGGTCCTGAATACCATGTCTCTCAGATTACTGATGCCGTGATGGTGGCGA 564
Query 469 AGCATCTTGGAGCAACTCTAGTACTTCCTGATATAAGAGGAAGCAAACCTGGTGATGAAA 528
||||||||||||||||||| || |||||||| || |||||||||||||||||||||||||
Sbjct 565 AGCATCTTGGAGCAACTCTTGTGCTTCCTGACATTAGAGGAAGCAAACCTGGTGATGAAA 624
Query 529 GGGATTTTGAAGATATCTATGATGTGGATAAACTAATTAAGAGCTTGGAAAATGTTGTTA 588
| | ||||||||||||||||||||||||||||| ||||| | |||||||| ||| || |
Sbjct 625 TGAAATTTGAAGATATCTATGATGTGGATAAACTCATTAAAACCTTGGAAAGTGTCGTCA 684
Query 589 AAGTTGTGA-AACAATTGCCTGAAGA-A-GTTTCTCTAAG-GAACATGGCCATTGTGAAG 644
||||||| | || ||||||| || | | || |||||||| || || |||||||| ||
Sbjct 685 AAGTTGTAAGAA-AATTGCC-GA-GCCACGTATCTCTAAGAGAT-ATTGCCATTGTCAAA 740
Query 645 GTCCCTACCAGAGTTACAGAAGATTACATTAAGGAGCACATTGATCCCATTTTTAAATCG 704
|| |||||| ||||| ||||||||||||| ||||| || ||||||||||| || |||||
Sbjct 741 GTTCCTACCCGAGTTGCAGAAGATTACATCAAGGAACATATTGATCCCATCTTCAAATCA 800
Query 705 AAAGGAAACATTCGAGTCGCATCATACTTCCCTTCTGTAAACTTGAGGAAATCCTCACAA 764
||||| ||||| | || || | || ||||||||||| || ||||||||||| || ||
Sbjct 801 AAAGGGAACATAAGGGTTACAACCTATTTCCCTTCTGTGAATTTGAGGAAATCTTCGCAG 860
Query 765 GATGGC-GAAACTGATCCTGTAGCATGTTTAGCAATGTTTGGGTCATTGGAGCTGCAACC 823
| || | ||||| || ||||| | ||||| ||||||||||| || ||||| |||||||
Sbjct 861 GGTG-CTGAAACCGACCCTGTCTCTTGTTTGGCAATGTTTGGTTCCTTGGAATTGCAACC 919
Query 824 CGAAGTGAATGCAGTGGCTGAATCAATGGTTGAGCGGTTGAGGACTCATAGCCGGAAATC 883
| |||||||| | ||| ||| || ||| || ||||||||| ||| |||||| ||||||
Sbjct 920 TGCAGTGAATGAATTGGTTGAGTCGATGATTCAGCGGTTGAAGACACATAGCAAGAAATC 979
Query 884 AGGTGGGCGTTTCATAGC-AGTAGACCTT-AGAATCGACATACTTGAGAAGAAAAATTGT 941
||||| ||||||||||| | ||||| || || | || |||||||| |||||||| ||
Sbjct 980 CGGTGGCCGTTTCATAGCCA-TAGAC-TTGAGGGTTGAGATACTTGAAAAGAAAAACTGC 1037
Query 942 CAT-ACCACTGGTGTAGTAGGG-TCCAAGACATGTTACAATGCGCAAGAGATTGCTTTGT 999
||| | || |||| ||| ||| ||||| ||||||||||| || ||||||||||| ||||
Sbjct 1038 CATGAA-ACAGGTGCAGT-GGGATCCAAAACATGTTACAACGCACAAGAGATTGCATTGT 1095
Query 1000 TCTTGAGGAAACTTGGATTTGCCAGCGACACAACTATCTATCTGACTCAGCCAAGATGGG 1059
|||||||||| |||||||||| |||||| |||||||| ||||||||||||||||||||||
Sbjct 1096 TCTTGAGGAAGCTTGGATTTGACAGCGATACAACTATATATCTGACTCAGCCAAGATGGG 1155
Query 1060 ACAGTAGCCTCAATATCCTTAAGGATATCTTCCCGAAAACAT-TCACAAAGGAGGCAATA 1118
| || ||||||||||| |||||||| || ||||| ||||||| | || |||||||| |||
Sbjct 1156 AGAGCAGCCTCAATATTCTTAAGGACATTTTCCCAAAAACATAT-ACTAAGGAGGCGATA 1214
Query 1119 ATGCCGGCA-AGTAAGAGATCGAAGTACCTTGAATCAGAGAGTTCTGAGTACGAAAATGT 1177
|||||| || | ||||| | ||||||||||||||| ||||| |||||| || ||||||||
Sbjct 1215 ATGCCGTCAGA-TAAGAAAACGAAGTACCTTGAATTAGAGAATTCTGAATATGAAAATGT 1273
Query 1178 TATCGACTTCTATATAAGCTCAAGAAGCGATGTCTTTGTTCCAGCCATATCC-GGTCTGT 1236
||| |||||||| ||||| ||||| || ||||| ||||| |||||||| ||| |||||||
Sbjct 1274 TATTGACTTCTACATAAGTTCAAGGAGTGATGTATTTGTACCAGCCAT-TCCCGGTCTGT 1332
Query 1237 TTTACGCAAACACCGTTGGCAAAAGGATAGCTTTAGGTAAGCCTCAAGTGCTAGTTCCAG 1296
||||||| || || ||||| ||||||||||||||||| ||||||||||| || |||||||
Sbjct 1333 TTTACGCCAATACAGTTGGAAAAAGGATAGCTTTAGGCAAGCCTCAAGTTCTCGTTCCAG 1392
Query 1297 CAGAAATCTCAGAGATATCTGGCCGTGCTAC-AGATTTCATCTCTCCGTACATTTCAAAG 1355
| || ||||||| || ||| || | | | | | ||| ||| ||||| || || ||||||
Sbjct 1393 CCGAGATCTCAGGGACATCCGGTCTTCCCGCTA-ATTACATATCTCCCTATATATCAAAG 1451
Query 1356 AAGAATCACTTGGCTTATTCATGCTTTTGCTGACCTTCTC 1395
||||| |||||||| |||||||||||||||||| ||||||
Sbjct 1452 AAGAACCACTTGGCGTATTCATGCTTTTGCTGAACTTCTC 1491
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 82429294890
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5