BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg479648
Length=4029
Score E
Sequences producing significant alignments: (Bits) Value
AT3G21290.1 | Symbols: | dentin sialophosphoprotein-related | ... 6143 0.0
> AT3G21290.1 | Symbols: | dentin sialophosphoprotein-related
| chr3:7482131-7488935 FORWARD LENGTH=4025
Length=4025
Score = 6143 bits (3326), Expect = 0.0
Identities = 3819/4052 (94%), Gaps = 54/4052 (1%)
Strand=Plus/Plus
Query 1 GAAGAAGAAGAAGAACAGAAGCGCTCTTTGGGTCCctctctctctctctctctcttctaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||
Sbjct 2 GAAGAAGAAGAAGAACAGAAGCGCTCTTTGGGTCCCTCTCTCTCTCTCTCTTTCTTCAAA 61
Query 61 tcatcgtctctcttcgctcttctctgctcgcgcgtctcaatcagttcaatctctACAATA 120
|||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 62 TCATCGTCTCTCGTCTCTCTTCTCTGCTCGCGCGTCTCAATCAGTTCAATCTCTACAATA 121
Query 121 CACATATGCCTCAATACATGGTT-GTTACGAAATTGCAGTGACGTCGGCGCAATTGTGAC 179
||| ||||| ||||||||| ||| || ||| ||||||||||||| ||| | |||| ||||
Sbjct 122 CACGTATGCATCAATACAT-GTTGGTAACGCAATTGCAGTGACGGCGGAGTAATTTTGAC 180
Query 180 CGGAATTATGTACAAAGGATCGTCGAAACGTGGCGGTAGAGGGGGAACCGGTGGTGGTAG 239
||||||||||| |||||||||||||||||||||||||||||| |||| |||||||| |
Sbjct 181 CGGAATTATGTTCAAAGGATCGTCGAAACGTGGCGGTAGAGGAGGAAGTGGTGGTGGGGG 240
Query 240 CGGTGGACCGTCCCGTAACCGTAATTCATTCCCTCCTCCTACTAACCGACATCCTTCTCC 299
| ||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 241 CAGTGGACCTTCCCGTAACCGTAATTCATTCCCTCCTCCTACAAACCGACATCCTTCTCC 300
Query 300 CGTCGGGAGGATGTCTTCTGGTGGTGGTGGTGGT-TCAGCCGCCGCTCCACGCCAGCGGA 358
| |||||||||||||||||||||||||||||||| | |||||||||||||||||||||
Sbjct 301 CATCGGGAGGATGTCTTCTGGTGGTGGTGGTGGTGGC-TCCGCCGCTCCACGCCAGCGGA 359
Query 359 GTAATTCTACTAACGGTAAGGCGGCTGCGGCGACTACGGTGTCGTCACGGACGGTTGAGG 418
|||||||||||| || ||||||||||||| |||||||||||||||| |||||||||||||
Sbjct 360 GTAATTCTACTAGCGTTAAGGCGGCTGCGTCGACTACGGTGTCGTCGCGGACGGTTGAGG 419
Query 419 AAACGTTTAATCTTGTTCCGAGGGAGAGTTCTTTGGCTTTTGGAATGATTATAAGGTTAG 478
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 420 AAACGTTTAATCTTGTTCCGAGGGAGAGTTCTTCGGCTTTTGGAATGATTATAAGGTTAT 479
Query 479 CTCCTGATTTGGTCGAGGAGATCAAGCGTGTGGAGGCACAAGGTGGAGCTGCGAAGATCA 538
||||||||||||| || ||||||||||||||||||||||||||||||||||| |||||||
Sbjct 480 CTCCTGATTTGGTGGATGAGATCAAGCGTGTGGAGGCACAAGGTGGAGCTGCCAAGATCA 539
Query 539 AGTTCGATGCGTATCCTAACAATAGCACTGGGAATATAATTAATGTTGGTGGAAAGGAGT 598
|||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 540 AGTTCGATGCGTTTCCTAACAATAGCACTGAGAATATAATTAATGTTGGTGGAAAGGAGT 599
Query 599 TCAGATTTACTTGGTCTAGGGAGCGTGGTGATTTATGTGATATATATGAAGAACATGAAA 658
||| ||||||||||||| ||||| ||||| |||||||||||||||||||||||| |||
Sbjct 600 TCAAATTTACTTGGTCTGGGGAGAAAGGTGAGTTATGTGATATATATGAAGAACATCAAA 659
Query 659 GTGGTGAAGATGGAAATGGTTTGCTGATTGAGGCTGGATGTGCTTGGCGAAAATTGAACG 718
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 660 GTGGTGAAGATGGAAATGGTTTGCTGATTGAGGCTGGATGTGCTTGGCGAAAATTGAACG 719
Query 719 TCCTGCGAACTCTAGATGAGTCAACCACAAGCCATATGAAGATGCGCTCAGTTGAAGCTG 778
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 720 TCCTACGAACTCTAGATGAGTCAACCACAAGCCATATGAAGATGCGCTCAGTTGAAGCTG 779
Query 779 AACAGAGAACCAAATCACGCAAGGCAATTGTTTTAGATCCTGGGAATCCATCATTAACGA 838
||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||
Sbjct 780 AACAGAGAACCAAATCACGCAAGGCCATTGTTTTAGATCCTGGGAATCCATCAGTAACGA 839
Query 839 AGCAGTTAGCTCATGCTGAAGGAAGTCCATGGAGAATGTCAAATAAACAGAAGAAGGAAC 898
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 840 AGCAGTTAGCTCATGCTGAAGGAAGTCCATGGAGAATGTCAAATAAACAGAAGAAGGAAC 899
Query 899 CTCCACTTAAGAAGCGGAAAGTTGATCCACCTCCAGTTCCAGTCGGAGGTCCAAAGCCTT 958
|||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 900 CTCCACCTAAGAAGCGGAAAGTTGATCCACCACCAGTTCCAGTCGGAGGTCCAAAGCCTT 959
Query 959 CTTTCAGACCAGGGGCTTCTACTCCTACTGTGAAAAATAGGCTATCAGCTTCACCGGGAC 1018
|||||||||||||||||||||| |||||| ||||||||||||||||||||||||| ||||
Sbjct 960 CTTTCAGACCAGGGGCTTCTACCCCTACTATGAAAAATAGGCTATCAGCTTCACCCGGAC 1019
Query 1019 CCTCTCCTAGTAATCAATTTAATACCCCTCCATTTGGGATTGGGAATATTGCTAAAACTC 1078
| |||||||||||||||| ||||||||||||| ||||||||||||||| ||||||||||
Sbjct 1020 CGTCTCCTAGTAATCAATACAATACCCCTCCATATGGGATTGGGAATATGGCTAAAACTC 1079
Query 1079 ATACAGCTAACGAGAATGTCACACCAGTCCAGACAAAGGGCAGAGAGAAGATGCTTGAAA 1138
|| |||||||||||||||||||||||||||||||||||||||||| ||| ||| | ||||
Sbjct 1080 ATGCAGCTAACGAGAATGTCACACCAGTCCAGACAAAGGGCAGAGTGAACATGATCGAAA 1139
Query 1139 GAGAACCATCAACCTGGAAAAATAATGCATTAAGGGACACATCTGGGCGCGAAGCAACCA 1198
|||||||||| ||||||||||||||| ||||||||||||||||||||||||||||| |
Sbjct 1140 AAGAACCATCAGCCTGGAAAAATAATGTATTAAGGGACACATCTGGGCGCGAAGCAATTA 1199
Query 1199 ATGTTAGTAAAGAAATTGACTTGCAGTCACTGCTGGTTGATATCCTAAAAGAGGCTCCAA 1258
|||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 1200 ATGTTAATAAAGAAATTGACTTGCAGTCACTGCTCGTTGATATCCTAAAAGAGGCTCCAA 1259
Query 1259 TGAGCTTGAAGGCTTTAGAGAAAGCAGTTGGAGATAGAA-TCCCTAATGCCGCAAAGAAG 1317
||||||||||||||||||||||||| |||||||||| || | |||||| |||||||||||
Sbjct 1260 TGAGCTTGAAGGCTTTAGAGAAAGCTGTTGGAGATA-AAGTTCCTAATCCCGCAAAGAAG 1318
Query 1318 ATTGAACCAATTTTGaaaaaaaTCGCAAATTTCCAAGCTCCAAGGTATTTCTTAAAACCA 1377
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1319 ATTGAACCAATTTTGAAAAGGATCGCAAATTTCCAAGCTCCAAGGTATTTCTTAAAACCA 1378
Query 1378 GAAGCAGAGTTGGAAAGCTATAAAAAACATTCACCTGATAACGGAAGTTCACCTGAACAC 1437
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 1379 GAAGCAGAGTTGGAAAGCTATAAAAAACATTCACCTGATAGCGGAAGTTCACCTGAACAC 1438
Query 1438 CAACAATTGCTGCCGA-TCACTGAGTGCAGTCGCGATCAGTTACCTGTTCCAGGGGGAAA 1496
|||||||||||||| | ||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1439 CAACAATTGCTGCC-AGTCACTGAGTGCAGTCGCGATCAGTTACCTGTTCCAGGAAGAAA 1497
Query 1497 TAACATGGAGAAAATTTCTTTGTGCAAGCAGAACGGAGAAGGTTCACTAGACTGTTTAGC 1556
||||| |||||| ||||||||||| |||||||||||||||||||||||||||||||| |
Sbjct 1498 TAACACAGAGAAATTTTCTTTGTGCGAGCAGAACGGAGAAGGTTCACTAGACTGTTTACC 1557
Query 1557 TGTGCATCTAGCAGAGCAATTGAGTACGCAGGAAAATGTTGACATTGAGCATCATTCACC 1616
||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1558 TGTGCATCTAGTAGAGCAACTGAGTACGCAGGAAAATGTTGACATTGAGCATCATTCACC 1617
Query 1617 TGGTCTTTTTCATGAGGAAAAACGATCCGAGAATAGTGAAGGCCAGGCTCGTAGCTCTAG 1676
|||| |||||||||||||||||||||| |||||||| |||| ||||||||||||||||||
Sbjct 1618 TGGTATTTTTCATGAGGAAAAACGATCTGAGAATAGAGAAGCCCAGGCTCGTAGCTCTAG 1677
Query 1677 TGATAGTGACAGTGATAGTGATAACAGTGACAGTGGGAGTGACAGTAAAAGTGCAGCTGG 1736
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1678 TGATAGTGACAGTGATAGTGATAACAGTGACAGTGGGAGTGACAGTAAAAGTGCAGCTGG 1737
Query 1737 AAGTGACAGTGGGAGCAGCAGTGATAGTGAGGCTTCTTCTAACAGTAAGGACGGTTCTGA 1796
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1738 AAGTGACAGTGGGAGCAGCAGTGATAGTGAGGCTTCTTCTAACAGTAAGGACGGTTCTGA 1797
Query 1797 TGAGGACGTGGATATCATGAGTGATGGTGACAGAGAGCCTCTACTGACAATACAGTCCGC 1856
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
Sbjct 1798 TGAGGACGTGGATATCATGAGTGATGGTGACAGAGAGCCTCTACTGACAACACAGTCC-C 1856
Query 1857 T-GAACAGGGA-GCAATTGATCTCCCAGGTCATGGTTCTAGTGCAGTTGAAATCGAGGGT 1914
| ||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1857 TTGAACAGG-ATGCAATTGATCTCCCAGGTCATGGTTCTAGTGCAGTTGAAATCGAGGGT 1915
Query 1915 CATGATTCTGATGCTGTTGACATTGACGGTCATGATTCTGATGCTGTTGATATTGATGGT 1974
||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 1916 CATAATTCTGATGCTGTTGACATTGACGGTCATGATTCTGATGCAGTTGATATTGATGGT 1975
Query 1975 CATGGGTCTGATGCAGTTGATGTCGAGGGGAACAGTTCAGATGAGGGTCATGGTTCTGAA 2034
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1976 CATGGGTCTGATACAGTTGATGTCGAGGGGAACAGTTCAGATGAGGGTCATGGTTCTGAC 2035
Query 2035 GCTGACAGaaaaaaaC-TCTCTGGTAATAGCTGGAAAACAGAAACAGCAACTGGTACCAG 2093
||||||||||||||| | |||| ||||| |||||||| |||||| |||||||||||||
Sbjct 2036 GCTGACAGAAAAAAAAAT-TCTGATAATAACTGGAAAATGGAAACAACAACTGGTACCAG 2094
Query 2094 TCCCCCTGCAAATGAAGAAGTTGGCATTTCAGGGCAGGAACATTTTGCTTCTGGTCACGA 2153
|||| ||||||||| ||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 2095 TCCCACTGCAAATGGAGAAGTTGGCATTTCAGGGCAGGAACATTTTACTTCTGGTCACGA 2154
Query 2154 CAACCTACGAGAGCGCCAAAATTTTATTGGACAGTTGTTTGATGACACAGAGAATACAAC 2213
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2155 CAACCTACGAGAACGCCAAAATTTTATTGGACAGTTGTTTGATGACACAGAGAATACAAC 2214
Query 2214 AAAGGATAACTTTAAAAATGACAAACGTGACATCTCCGAGAGGCTGGCAAAAGACCAGAA 2273
|||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 2215 AAAGAATAACTTTAAAAATGACAAACGTGACATCTCCGAGAGGCTGGGGAAAGACCAGAA 2274
Query 2274 CCAAAAAGCCCTTGATTTTGAGCACTACAGTCAGAAATCAGCACGA-GAGAAAAATAGAA 2332
|||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||
Sbjct 2275 CCAAAAAGCCCTTGATTTTGAGCACTACAGTCAGAAATCAGCAC-ATGAGAAAAATAGAA 2333
Query 2333 AATCCCAGAGCTGCAATCAGTTACCTGCCATAAGTAAAGATTCACAGCGTTTAGAGCTCA 2392
||||||||||||||||||||||| ||||| |||||||||||||||||| || ||||||||
Sbjct 2334 AATCCCAGAGCTGCAATCAGTTATCTGCCGTAAGTAAAGATTCACAGCATTCAGAGCTCA 2393
Query 2393 AGTATGATGCAGAACTTCGCAACGCTTCTGCGAGTCAAACGATAGATCCACTTAGAGGAC 2452
|||||||||| |||||||||||||||||||| ||||||||||| ||||||||||||||||
Sbjct 2394 AGTATGATGCCGAACTTCGCAACGCTTCTGCCAGTCAAACGATCGATCCACTTAGAGGAC 2453
Query 2453 TCCAGAAGTCATCTATTGAAAAGTCGAATAGACATGGTAAATCAAACAAACATTCTGATG 2512
| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2454 TTCTGAAGTCATCTATTGAAAAGTCGAATAGACATGGTAAATCAAACAAACATTCTGATG 2513
Query 2513 CCTTGGGAAATGTTCGTAAATCTGACGAAGGGGACCATTTTCCGCATGAAATGCTTTCTA 2572
|||| ||||||||||||||||||||| |||||||||||||||| | ||||||||||||||
Sbjct 2514 CCTTAGGAAATGTTCGTAAATCTGACAAAGGGGACCATTTTCCACTTGAAATGCTTTCTA 2573
Query 2573 GTCGGTCAGGAAAGGCCTTCAGGGACAATCAAAGAGATGATGTTCATTTGAAAAATAAAT 2632
|||| |||||||||||||||||||||||||| |||||||||||||||||||||||||| |
Sbjct 2574 GTCGCTCAGGAAAGGCCTTCAGGGACAATCAGAGAGATGATGTTCATTTGAAAAATAAGT 2633
Query 2633 TTCCAAGGAATAAAAAAGATGGTGAGTCAGCCATTCGACCTTCGTTACCTACCGAGACAT 2692
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 2634 TTCCAAGGAATAAAAAAGATGGTGAGTCAGCCATTCGACCTTCATTACCTACCGAGACAT 2693
Query 2693 CCGATAGAAAGCACGGTGAACTGGATGGAAGTGACAAGGATCCCAAGAATGTTTCAGGCT 2752
|||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2694 CCGATAGAAAGCCCGATGAACTGGATGGAAGTGACAAGGATCCCAAGAATGTTTCAGGCT 2753
Query 2753 TGAGCATAGGTTCTTCTCCCTTAGATAGCCAGAGAACATATTTGGCGAAATCACCTAAGG 2812
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 2754 TGAGCATAGGTTCTTCTCCCTTAGATAGCCAGAGAACATATTTGGCGAAATTACCTAAGG 2813
Query 2813 AAAATGGATCTGTCCTCCAAAAACAAGTTTCGGAATTGGAGTTGGGTGAACTCCCTGAGC 2872
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2814 GAAATGGACCTGTCCTCCAAAAACAAGTTTCGGAATTGGAGTTGGGTGAACTCCCTGAGC 2873
Query 2873 CATTGAGTGAAGATACAGCATTGAAGCC-ACTCGAAGAGAAAACTTCGTTTAGGCAGTCA 2931
||||| |||||||||||||||||||||| | |||||||||||||||||||||||||||||
Sbjct 2874 CATTGGGTGAAGATACAGCATTGAAGCCGA-TCGAAGAGAAAACTTCGTTTAGGCAGTCA 2932
Query 2932 AATTTAAAACCAATCACTTCAGAGAAATCGGGTATTGACACGGATAAACGAAGGTCTAAA 2991
||||||||||||| |||||||||||||| |||||||||| ||||||||||||||||||||
Sbjct 2933 AATTTAAAACCAAGCACTTCAGAGAAATTGGGTATTGACTCGGATAAACGAAGGTCTAAA 2992
Query 2992 AAATCTGACTCAAAAAAGGCAGCTCCTCCACATGCAGTCAATTGTATCGAAGAATTGCCC 3051
||||||||||||||||||||||||||||||||| |||| ||| ||| | || |
Sbjct 2993 AAATCTGACTCAAAAAAGGCAGCTCCTCCACATACAGTAAATGGTAGC-AA------C-- 3043
Query 3052 GAACACGTTGTTGAAGATTCAGAAAGATCCCAAAAGTGGGCTTTGCAGTCACATGGGCAG 3111
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3044 GAACACGTTGTTGAAGATTCAGAAAGATCCCAAAAGTGGGCTTTGCAGTCACATGGGCAG 3103
Query 3112 AACCTTACAGGTACAGATACTGAAATCGGCTCACAGAATAAAAATTTAGAGGATGCAGCT 3171
||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||
Sbjct 3104 AACCTTACAGGTACAGATACTGAAATCAGCTCACAGAATAAAAATTTAGAAGATGCAGCT 3163
Query 3172 TATAAATCCAGACAAAAAGATAGTAGAGCAAGAGTAGGAAACAGTGTGGAAGGTTATGGA 3231
|||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 3164 TATAAATCTAGACAAAAAGATAGTAGAGCAAGAGTAGGGAACAGTGTGGAAGGTTATGGA 3223
Query 3232 GAAACAAACaaaaaaaCGCCTGTTATAAAGCATGGCTCCAAACGAGCATCCACATCCCGC 3291
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 3224 GAAACAAACAAAAAAACGCCTGTTGTAAAGCATGGCTCCAAACGAGCATCCACATCCCGC 3283
Query 3292 TCATCAAGGGAGAGCAAAAGACATGT-GTCTGTCTCAAATTCTATCAATGGACACAAAGA 3350
|| ||||||||||||||||||||| | ||||||||||||||| |||||||||||||||||
Sbjct 3284 TCTTCAAGGGAGAGCAAAAGACAT-TCGTCTGTCTCAAATTCAATCAATGGACACAAAGA 3342
Query 3351 TGCAACTTCAATACCAGGTGACAGTGTTGTCCGGGAGAAACGAATGACATCTTTCGGTGA 3410
|||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||
Sbjct 3343 TGCAACTTCAATACCAGGTGGCAGTGTTGTCCGGGAGAAACAAATGACATCTTTCGGTGA 3402
Query 3411 AGAAGACTCTTCTTATTTGAAATACGAGAAAGCTTCTCCTGAGCTGAAGGGACCCATTAG 3470
||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||
Sbjct 3403 AGAAGACTCTTCTTATTTGAAATACGAGAAAGCTTCTCCTGAGCTTAAGGGACCTATTAG 3462
Query 3471 TGATCATTTGCAGTATAAAGCCTACATGCAGGAATATATTGATAAATATGATAGCTACTG 3530
|||||||||||||||||||||||| |||||||| |||| |||||||||||||||||||
Sbjct 3463 TGATCATTTGCAGTATAAAGCCTATATGCAGGAGTATAATGATAAATATGATAGCTACCA 3522
Query 3531 CTCCATTAACAAGACATTAGAGAGCCACAGAAATGACTTTCAAAAGTTGGGGCAAGACCT 3590
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3523 CTCCATTAACAAGATATTAGAGAGCCACAGAAATGACTTTCAAAAGTTGGGGCAAGACCT 3582
Query 3591 TGGGTTTGCAAAAGGAAGGGATGTGGAGAGATATAACAAAATTGTGGAGCAGATAAAGGA 3650
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3583 TGGGTTTGCAAAAGGAAGGGATGTGGAGAGATATAACAAAATTGTGGAGCAGATAAAGGA 3642
Query 3651 AGCTTATTGCAAATATGGGGAGAGGCACAAACGTTTGAAGAAAGTATTTGTTGTTCTCCA 3710
| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 3643 ATCTTATTGCAAATATGGGGAGAGACACAAACGTTTGAAGAAAGTATTTGTTGTTCTCCA 3702
Query 3711 CGAAGAATTGAAGGAACTGAAACAAAGAATGAGAGACTATGCATCATCTCATGGAAAAGA 3770
||||||||||||| | ||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 3703 CGAAGAATTGAAGCACCTGAAACAAAGAATGAGAGACTACGCATCATCTCATGGAAAAGA 3762
Query 3771 TTGATGGAAACTGGAACCAAAAACTCTC-T--GGACCTCACACGCAGAGGTGAAA-AT-- 3824
|||||||||||||||||||||| ||||| | || || | | ||||| ||
Sbjct 3763 TTGATGGAAACTGGAACCAAAA-CTCTCCTTTGGTGGAGTCAT-CTT-GTTGAAACATTA 3819
Query 3825 GttttttttttttttttttAATCTTGTGAAATTAGAAATGATTCATAGGCCCAATTTTGT 3884
| | | ||||| ||| ||| ||||||||||||||||||||||||||||||||||||||
Sbjct 3820 GCTCTGTTTTTCTTTCTTT---CTTGTGAAATTAGAAATGATTCATAGGCCCAATTTTGT 3876
Query 3885 GTGAGTTGTACTTAGGGAGGAGCTTTGATAGATTTT-TG-TTACATACAGTTGGTTTAGT 3942
|||||||||||||||| |||| ||||| |||||||| | || | |||||||||||||
Sbjct 3877 GTGAGTTGTACTTAGG-AGGACCTTTGGTAGATTTTATTCTTGT-TGCAGTTGGTTTAGT 3934
Query 3943 TGGAGCAG-TCGGATAAACTAAAATGTACAT----GGGTATCAAGATCAATGTAGATTCT 3997
|||||| | ||| |||||| || |||||||| |||||||||||||||||||||||||
Sbjct 3935 TGGAGC-GCTCG-ATAAACGAATATGTACATACATGGGTATCAAGATCAATGTAGATTCT 3992
Query 3998 TCTGGCTCTCTGCTTTAATTTAACTTTGATAA 4029
||||||||| |||||||||||||||||||||
Sbjct 3993 TCTGGCTCT--GCTTTAATTTAACTTTGATAA 4022
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 200768105886
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5