BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg479651 Length=1544 Score E Sequences producing significant alignments: (Bits) Value AT3G21310.1 | Symbols: | Core-2/I-branching beta-1,6-N-acetylg... 2198 0.0 AT1G51770.1 | Symbols: | Core-2/I-branching beta-1,6-N-acetylg... 863 0.0 > AT3G21310.1 | Symbols: | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein | chr3:7497290-7499152 FORWARD LENGTH=1584 Length=1584 Score = 2198 bits (1190), Expect = 0.0 Identities = 1367/1453 (94%), Gaps = 9/1453 (1%) Strand=Plus/Plus Query 1 ACCAAAATCAGATTAGAGTTACAGAGACATCCCTCGAATACGATCATCAGACAAGACTTA 60 |||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| Sbjct 1 ACCAAAATCAGATTAGAGTTTCAGAGACATCTCTCGAATACGATCATCAGACAAGACTTA 60 Query 61 AGCTCCATTTACACGTCTCCCTGCTCACGAGAGACAAATCATGAACGAATCCGACAGCTG 120 | |||||||| ||||||| ||||||||||| ||||||||||||||||||||||||||||| Sbjct 61 ACCTCCATTTGCACGTCTTCCTGCTCACGACAGACAAATCATGAACGAATCCGACAGCTG 120 Query 121 AACGAATTGCGTGTCTGAGAAGATCCAAATCCTAATTTTCTACC-ttttttttGGCAGGA 179 |||||||||||||||||||||||||||||||||||||||||||| |||||||| | ||| Sbjct 121 AACGAATTGCGTGTCTGAGAAGATCCAAATCCTAATTTTCTACCTTTTTTTTTTG--GGA 178 Query 180 GCT-AGATTAGAATTTGGAACTTCTCGTACGTTTTCGCTTGCCTACGTTTCCGGACAAAA 238 || || |||||||||||| ||||||||||||||| |||||||||||||||||||||||| Sbjct 179 ACTAAGGTTAGAATTTGGAGCTTCTCGTACGTTTTTGCTTGCCTACGTTTCCGGACAAAA 238 Query 239 CCCTATTTGCATATTAACAGGATTGGTTCTGTTCATCAAGA-ACTTGAAG-CTGATGGGG 296 |||||||||||||| ||||| | ||||||||||||||||| || ||||| ||||||||| Sbjct 239 CCCTATTTGCATATAAACAGAACAGGTTCTGTTCATCAAGACAC-TGAAGCCTGATGGGG 297 Query 297 ATGGAGGAAGGGATTAAGGATAATGCTGCATCAGCTCCCAATTCAAGATATACAAACCAA 356 ||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||| Sbjct 298 ATGGAGGAAGGGATTAAAGATAATGCTGCATCAGCTCCCAATTCAAGACCTACAAACCAA 357 Query 357 TTTAAAGCTCTTTTACCGATGCGGGTGCTTCAGGTTTTCTTGTTGTTCTTTGTTTTGGTT 416 ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 358 CTTAAAGCTCTTTTACCGATGCGGGTGCTTCAAGTTTTCTTGTTGTTCTTTGTTTTGGTT 417 Query 417 CTTGGAATCTCAGTCATTAGTATGCACATGATCAAGTACTTAAATATTCAAACTTTGGCT 476 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| Sbjct 418 CTTGGAATCTCAGTCATTAGTATGCACATGATCAAGTACTTAAAGATTCAAACTTTAGCT 477 Query 477 CCATCCACATTGATCTCTCCCTATGATGAGAGAATTACATTAGAGAGCTTTATCAAGCCT 536 ||||| |||||||||||| | ||||||||||||||||| ||||||||| ||||||||||| Sbjct 478 CCATCGACATTGATCTCTACTTATGATGAGAGAATTACGTTAGAGAGCCTTATCAAGCCT 537 Query 537 CCATCGAGTGTTTGGCACTCCATGAATGACAGTGAGCTTCTTTGGCGTGCTTCGATGGAG 596 |||| || || |||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 538 CCATTGAATGGTTGGCATTCCATGAATGACAGTGAGCTTCTTTGGCGTGCTTCGATGGAG 597 Query 597 CCACGGATACTTGAATATCCGTATAAAAGGGTTCCTAAAATGGCATTCATGTTTCTCACC 656 || ||||||||||| ||||| | |||||| |||||||||||||||||||||||||||||| Sbjct 598 CCTCGGATACTTGACTATCCATTTAAAAGAGTTCCTAAAATGGCATTCATGTTTCTCACC 657 Query 657 AAAGGACCTTTGCCATTTGCTCCACTTTGGGAAAGGTTTTTCAACGGGCATGAGGGCTTT 716 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 658 AAAGGACCTTTGCCATTTGCTCCACTTTGGGAAAGGTTTTTCAAAGGGCATGAGGGCTTT 717 Query 717 TACTCAATCTATGTTCATGCGTTGCCAGATTATAGATCAGATTTCCCAAGCTCATCTGTG 776 |||||||||||||||||| | |||||| |||||||||||||||||||||||||||||||| Sbjct 718 TACTCAATCTATGTTCATACTTTGCCAAATTATAGATCAGATTTCCCAAGCTCATCTGTG 777 Query 777 TTTTATAGAAGACAGATCCCAAGTCAGCCA-GTGGCTTGGGGAGAGATGAGTATGTGTGA 835 ||||| |||||||||||||||||||||| | || |||||||||||||||||||||||||| Sbjct 778 TTTTACAGAAGACAGATCCCAAGTCAGC-ATGTAGCTTGGGGAGAGATGAGTATGTGTGA 836 Query 836 TGCTGAAAGGAGGCTTTTGGCTAATGCCTTGCTCGATATCTCTAACGAATGGTTTGTTTT 895 |||||||||||||||||||||||| || |||||||||||||||||||||||||||||||| Sbjct 837 TGCTGAAAGGAGGCTTTTGGCTAACGCGTTGCTCGATATCTCTAACGAATGGTTTGTTTT 896 Query 896 GCTATCTGAAGCGTGCATTCCTATTCGCGGTTTCAACTTTGTCTACCATTATGTCTCTAG 955 |||||||||||||| |||||| |||||||||||||||||||||||| |||||||||||| Sbjct 897 ACTATCTGAAGCGTGTATTCCTCTTCGCGGTTTCAACTTTGTCTACCGTTATGTCTCTAG 956 Query 956 ATCAAGATATAGTTTCATGGGTTCTGTTGATGAGGACGGTCCTTACGGGAGAGGCAGATA 1015 |||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||| Sbjct 957 ATCAAGATATAGTTTCATGGGTTCTGTTGACGAGGACGGGCCTTACGGGAGAGGCAGATA 1016 Query 1016 CAGTTATGCAATGGGGCCAGAAGTCAGTCTAAGCGAGTGGAGAAAAGGGTCTCAGTGGTT 1075 || ||||||||||| |||||||| ||||||| ||||||||||||||||||||||||||| Sbjct 1017 TAGCTATGCAATGGGACCAGAAGTAAGTCTAAACGAGTGGAGAAAAGGGTCTCAGTGGTT 1076 Query 1076 TGAAATTAACAGAGCACTTGCTGTTGAAATTGTTGAAGACATGGTTTACTATAAAAAATT 1135 |||||| |||||||||||||||||||| |||||||||||||||||||||||||| ||||| Sbjct 1077 TGAAATAAACAGAGCACTTGCTGTTGATATTGTTGAAGACATGGTTTACTATAACAAATT 1136 Query 1136 CAAAGAGTTTTGTAGACCTCCTTGTTATGTAGATGAACATTACTTCCCCACAATGCTCTC 1195 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 1137 CAAAGAGTTTTGTAGACCTCCTTGTTATGTAGATGAACATTACTTCCCAACAATGCTCTC 1196 Query 1196 TATTGGATATTCGGATTTGCTCGCTAATCGGACATTGACATGGACAGATTGGTCAAGAGG 1255 |||||||||| ||||||| |||||||||||||||||||| ||||||||||||||||| || Sbjct 1197 TATTGGATATCCGGATTTTCTCGCTAATCGGACATTGACTTGGACAGATTGGTCAAGGGG 1256 Query 1256 TGGTGCTCATCCAGCTACTTTTGGCAAAACTGATATAACAGAGAGGTTCCTCAAGAAGCT 1315 ||||||||||||||||||||||||||| ||||||||||||||| |||| |||||||||| Sbjct 1257 TGGTGCTCATCCAGCTACTTTTGGCAAGGCTGATATAACAGAGAAGTTCATCAAGAAGCT 1316 Query 1316 TTCACGAGGTCAAGCTTGCTTCTACAATGATAAGCCATCTCAAGTGTGTTATCTTTTTGC 1375 ||| ||||| |||||||||||||||||||| ||||||||||||| |||||||||||||| Sbjct 1317 GTCAAGAGGTAAAGCTTGCTTCTACAATGATCAGCCATCTCAAGTTTGTTATCTTTTTGC 1376 Query 1376 AAGAAAGTTTTCGCCAAGCGCATTGGAGCCTTTACTCAAACTTGCACCAAAGGTTCTTGG 1435 |||||||||| | |||||||||||| |||||||||| ||||||||||||||||||||||| Sbjct 1377 AAGAAAGTTTGCTCCAAGCGCATTGAAGCCTTTACTTAAACTTGCACCAAAGGTTCTTGG 1436 Query 1436 GTTCTAACTAATG 1448 ||||||| ||||| Sbjct 1437 GTTCTAATTAATG 1449 Score = 111 bits (60), Expect = 2e-23 Identities = 69/73 (95%), Gaps = 2/73 (3%) Strand=Plus/Plus Query 1474 CTTCGTATAGCATGGACACAACT--GATCCTTACTGTCTCCTTCCACATTTATAATATAG 1531 ||||||||||||||||||||||| |||||||| |||||||||||||||| ||||||||| Sbjct 1512 CTTCGTATAGCATGGACACAACTCTGATCCTTATTGTCTCCTTCCACATTGATAATATAG 1571 Query 1532 ATACTTCAATGGC 1544 ||||||||||||| Sbjct 1572 ATACTTCAATGGC 1584 > AT1G51770.1 | Symbols: | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein | chr1:19201789-19203224 FORWARD LENGTH=1351 Length=1351 Score = 863 bits (467), Expect = 0.0 Identities = 952/1181 (81%), Gaps = 54/1181 (5%) Strand=Plus/Plus Query 291 ATGGGGATGGAGGAA-GGGATTAAGGATAATGCTGCATCAGCTCCCAATTCAAGATAT-A 348 |||| |||||||||| | | |||| || |||| | ||||| | || || || ||| | | Sbjct 146 ATGGAGATGGAGGAATGTG-TTAAAGAAAATGGTTCATCAACACCTAAATCTAGA-GTCA 203 Query 349 CAAACCAATTTAAAGCTCTTTTACCGATGCGGGTGCTTCAGGTTTTCTTGTTG-TTCTTT 407 ||||||||| || |||||| |||||| |||| |||||||| || | || ||| ||| || Sbjct 204 CAAACCAATCTAGAGCTCTCTTACCGTTGCGTCTGCTTCAGATTCTGTTATTGTTTC-TT 262 Query 408 GTTTTGGTTCTTGGAATCTCAGTCATTAGTATGCACATGATCAAGTACTT-AA-A-T--A 462 |||||| |||||| ||||| || ||||||| ||||||||||||| || || | | | Sbjct 263 GTTTTGACTCTTGGGATCTCTGTTGTTAGTATACACATGATCAAGTTTTTGAAGATTCAA 322 Query 463 --TTCA-A-ACTTTGGCTCC-ATCCACATTGATCTCT-C-CCT-ATGATGAGAGAATTAC 514 || | | || ||||||| || || ||| ||||| | | || ||||||| |||| Sbjct 323 CGTTTAGATCCTGTGGCTCCAAT-TACTTTGCTCTCTACGTATAATCATGAGAGTGTTAC 381 Query 515 ATTAGAGAGCTTTATCAAG-CCTCCATCGAGTGTTTGGCACTCCATGAATGACAGTGAGC 573 ||||| |||||||| || ||||| || | |||||||||| | |||||||| ||||| Sbjct 382 TTTAGATAGCTTTAT-TAGACCTCCTTCCAATGTTTGGCACACAATGAATGATAGTGA-A 439 Query 574 TT-CTTTGGCGTGCTTCGATGGAGCCACGGATACTTGAATATCCGTATAAAAGGGTTCCT 632 || |||||||||||||| || ||||| | | | || ||||||| || | | || ||| Sbjct 440 TTGCTTTGGCGTGCTTCTATAGAGCCGCAAAGAAATGGTTATCCGTTTAGACGTGTCCCT 499 Query 633 AAAATGGCATTCATGTTTCTCACCAAAGGACCTTTGCCATTTGCTCCACTTTGGGA-AAG 691 ||| |||| ||||||||||| ||||||| ||||| |||||||||||||||||||| || Sbjct 500 AAATTGGCTTTCATGTTTCTTGCCAAAGGTCCTTTACCATTTGCTCCACTTTGGGAGAA- 558 Query 692 GTT-TTTCAACGGGCATGAGGGCT-TTTACTCAATCTATGTTCATGCGTTGCC-AGATTA 748 ||| | | || || |||||||| | |||| || |||||||||||| ||||||| || ||| Sbjct 559 GTTCTGT-AAAGGACATGAGGG-TCTTTATTCTATCTATGTTCATTCGTTGCCTAG-TTA 615 Query 749 TAGATCAGATTTCCCAAGCTCATCTGTGTTTTATAGAAGACAGATCCCAAGTCAGCCAGT 808 | ||| ||||| | || || ||||||||||| |||||| | ||||| |||||| | || Sbjct 616 CAAATCGGATTTTTCGAGGTCGTCTGTGTTTTACAGAAGATATATCCCTAGTCAGGCTGT 675 Query 809 GGCTTGGGGAGAGATGAGTATGTGTGATGCTGAAAGGAGGCTTTTGGCTAATGCCTTGCT 868 ||| |||||||||||||||||| |||| || || |||||||||||||||||||| ||||| Sbjct 676 GGCATGGGGAGAGATGAGTATGGGTGAAGCAGAGAGGAGGCTTTTGGCTAATGCGTTGCT 735 Query 869 CGATATCTCTAACGAATGGTTTGTTTTGCTATCTGAAGCGTGCATTCCTATTCGCGGTTT 928 ||||||||||| |||||||||||| |||| |||||| | ||||||||| | || ||||| Sbjct 736 TGATATCTCTAATGAATGGTTTGTTCTGCTGTCTGAATCATGCATTCCTCTGCGAGGTTT 795 Query 929 CAACTTTGTCTACCA-TTATGTCTCTAG-ATCAAGATATAGTTTCATGGGTTCTGTTGAT 986 || |||| |||| | |||||||||| | ||||||||||||||| |||||| ||| |||| Sbjct 796 CAGCTTTATCTA-TAGTTATGTCTCT-GAATCAAGATATAGTTTTATGGGTGCTGCTGAT 853 Query 987 GAGGACGGTCCTTACGGGAGAGGCAGATACA-GTTATGCAATGGGGCCAGAAG-TCAGTC 1044 ||||| || ||| | || ||||||||||||| | | | ||||| || | || ||| | Sbjct 854 GAGGAAGGACCTGATGGAAGAGGCAGATACAGGACA-GAAATGGAACCTG-AGATCACAC 911 Query 1045 TAAGCGAGTGGAGAAAAGGGTCTCAGTGGTTTGAAATTAACAGAGCA-CTTGCTGTTGAA 1103 ||||| ||||| ||||||||||||||||||||||||||||| | | | || |||||||| Sbjct 912 TAAGCCAGTGGCGAAAAGGGTCTCAGTGGTTTGAAATTAACCG-GAAACTCGCTGTTGAG 970 Query 1104 ATTGTTGAAGACA-TGGTTTACTATAAAAAATTCAAAGAGTTTTGTAGACCTCCTTGTTA 1162 |||||| |||||| | || ||||| |||||||||||||||||||||||||| || || Sbjct 971 ATTGTTCAAGACACTACTT-ACTATCCCAAATTCAAAGAGTTTTGTAGACCTCCATGCTA 1029 Query 1163 TGTAGATGAACATTACTTCCCCACAATGCTCTCTATTGGAT-ATTCGGATTT-GCTCGCT 1220 ||||||||||||||||||||| |||||| | ||||| | | || ||| ||| ||| ||| Sbjct 1030 TGTAGATGAACATTACTTCCCAACAATGTTGTCTAT-GAAACAT-CGGGTTTTGCTTGCT 1087 Query 1221 AATCGGACATTGACATGGACAGATTGGTCAAGAGGTGGTGCTCATCCAGCTACTTTTGGC 1280 ||| |||||||||||||||||||||||||| | |||||||||||||||||||||||||| Sbjct 1088 AATAGGACATTGACATGGACAGATTGGTCACGTGGTGGTGCTCATCCAGCTACTTTTGGT 1147 Query 1281 AAAACTGATATAACAGAGAGGTTCCTCAAGAAGCTTTCACGAGGTCAAG-CTTGCTTCTA 1339 || ||||| |||| || || || |||||||||||| || ||| ||| ||||| |||| Sbjct 1148 AAGGCTGATGTAACGGAAAGTTTTCTCAAGAAGCTTACAGGAGC-CAAATCTTGCCTCTA 1206 Query 1340 CAATGATAAGCCA-TCTCAAGTGTGTTATCTTTTTGCAAGAAAGTTTTCGCCAAGCGCAT 1398 ||||||| | | | |||||| | |||||||| ||||| ||||||||| | |||||||||| Sbjct 1207 CAATGATCATC-AGTCTCAAATCTGTTATCTCTTTGCCAGAAAGTTTGCTCCAAGCGCAT 1265 Query 1399 TGGAGCCTTTACT-CAAACTTGCACCAAAGGTTCTTGGGTT 1438 ||||||||||||| ||| |||||||| ||| |||||| ||| Sbjct 1266 TGGAGCCTTTACTGCAA-CTTGCACCCAAGATTCTTGAGTT 1305 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 76204427310 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5