BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg479668
Length=2227
Score E
Sequences producing significant alignments: (Bits) Value
AT3G21500.2 | Symbols: DXPS1 | 1-deoxy-D-xylulose 5-phosphate s... 3038 0.0
AT4G15560.1 | Symbols: CLA1, DEF, CLA, DXS, DXPS2 | Deoxyxylulo... 1055 0.0
> AT3G21500.2 | Symbols: DXPS1 | 1-deoxy-D-xylulose 5-phosphate
synthase 1 | chr3:7573634-7576623 REVERSE LENGTH=2228
Length=2228
Score = 3038 bits (1645), Expect = 0.0
Identities = 2069/2263 (91%), Gaps = 71/2263 (3%)
Strand=Plus/Plus
Query 1 ATTAATACTACCACTATATATACGTTGGAATGTCATATCAAACACAGATTATCAAATTCT 60
||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 1 ATTGATACTACCACTATATATACGTTGGAATGTCATATCAAACACAGATTAACAAATTCT 60
Query 61 CTCAAAATGGCTCTCTCCGTATTTGCCTTTCCTTCTTACATATATAGAAATCCTTCAATT 120
||| |||||||||||||||||||||||||||||||||||||| |||| ||||||||| |
Sbjct 61 CTC-AAATGGCTCTCTCCGTATTTGCCTTTCCTTCTTACATAAATAGGAATCCTTCACTA 119
Query 121 AAATAT-TGCAAACCTACTTCTATGTCTTCTACAAAA-ACTTCAAAAGTAAGAGCAAC-A 177
|||||| | |||||| |||||||||||||||||||| | |||||||||||||||||| |
Sbjct 120 AAATATCT-TAAACCTTCTTCTATGTCTTCTACAAAATA-TTCAAAAGTAAGAGCAACAA 177
Query 178 -A-TTGCAGAGAAAGGTGAATATTATTCAAGTAGACCACCAACTCCTTTACTGGACACAA 235
| || |||||||||||||||||||||||| |||||||||||||||||| |||||||||
Sbjct 178 CATTTTCAGAGAAAGGTGAATATTATTCAAACAGACCACCAACTCCTTTATTGGACACAA 237
Query 236 TCAACCATCCAATGCACATGAAGAATCTGTCCATCAAAGAACTCAAAGTTCTTTCTGACG 295
|||||||||||||||||||||| ||||| |||||||||||||||||||||||||| ||||
Sbjct 238 TCAACCATCCAATGCACATGAAAAATCTCTCCATCAAAGAACTCAAAGTTCTTTCGGACG 297
Query 296 AGTTGAGATCTGATGTTATCTTCAATGTTTCAAAAACTGGAGGACACTTGGGTTCGAATC 355
||||||||||||||||||| || |||||||| ||||||||||||||||||||||||||||
Sbjct 298 AGTTGAGATCTGATGTTATTTTTAATGTTTCGAAAACTGGAGGACACTTGGGTTCGAATC 357
Query 356 TGGGTGTTGTTGAGCTCACTGTGGCCCTTCATTACATCTTCAATACTCCTCAAGATAAGA 415
| ||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||
Sbjct 358 TTGGTGTTGTTGAGCTCACCGTGGCCCTTCATTACATCTTCAATACTCCTCATGATAAGA 417
Query 416 TCCTTTGGGATGTTGGTCATCAGTCTTATCCTCACAAGATTCTAACGGGAAGAAGAGGAA 475
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 418 TCCTTTGGGATGTTGGTCATCAGTCTTATCCTCACAAGATTCTAACGGGAAGAAGAGGAA 477
Query 476 AGATGAAGACAATAAGGCAGACCGATGGCCTCTCCGGCTACACCAAGAGAAGAGAGAGTG 535
||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||
Sbjct 478 AGATGAAGACAATAAGGCAGACCAATGGCCTCTCCGGCTACACCAAGCGAAGAGAGAGTG 537
Query 536 AGCATGACTCCTTTGGCACCGGGCACAGTTCTACCACAATATCTGCAGGCTTAGGGATGG 595
|||||||||| |||||||||||||||||||| |||||| |||||||||||||||||||||
Sbjct 538 AGCATGACTCTTTTGGCACCGGGCACAGTTCGACCACACTATCTGCAGGCTTAGGGATGG 597
Query 596 CTGT-GGGCAGGGATTTGAAGGGGATGAACAACAGCGTGGTTGCGGTTATAGGCGATGGC 654
|||| ||| ||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 598 CTGTAGGG-AGGGATTTGAAGGGGATGAACAACAGCGTGGTTTCGGTTATAGGCGATGGT 656
Query 655 GCAATGACAGCTGGACAAGCTTATGAAGCTATGAACAATGCTGGCTACTTAGACTCTGAC 714
|| |||||||||||||||||||||||||| ||||||||||||||||||||| |||| ||
Sbjct 657 GCTATGACAGCTGGACAAGCTTATGAAGCAATGAACAATGCTGGCTACTTACACTCCAAC 716
Query 715 ATGATTGTGATTCTCAACGACAATAAACAAGTCTCTTTGCCTACTGCTAACTTTGATGGA 774
||||||||||||||||||||||| |||||||| |||||||||||||||||||| ||||||
Sbjct 717 ATGATTGTGATTCTCAACGACAACAAACAAGTATCTTTGCCTACTGCTAACTTGGATGGA 776
Query 775 CCAACTCCACCTGTTGGAGCT-T----TGAG--C----T--G-TGC--TCTAA--GT--- 813
||||||| ||||||||||||| | || | | | | ||| ||||| ||
Sbjct 777 CCAACTCAACCTGTTGGAGCTCTGAGCTGTGCTCTTAGTAGGCTGCAATCTAATTGTGGA 836
Query 814 A-G--T-G-G-GACTGGTTCAACTCTGTTTGAAGAACTTGGTCTCCATTATGTTGGTCCA 867
| | | | | |||| ||||||| |||||||||||||||||| | || ||||||||||||
Sbjct 837 ATGATTAGAGAGACTAGTTCAACACTGTTTGAAGAACTTGGTTTTCACTATGTTGGTCCA 896
Query 868 GTTGATGGGCACAACATAGATGATCTGGTCTCCATTCTTGAAAAAGTAAAAAGCACCAAA 927
|||||||| |||||||||||||||||||||||||||||||||| | |||| |||||||||
Sbjct 897 GTTGATGGACACAACATAGATGATCTGGTCTCCATTCTTGAAACATTAAAGAGCACCAAA 956
Query 928 TCCATAGGACCGGTTCTTATTCATGTCGTGACTGAGAAAGGTCGCGGATATCCCTACGCA 987
||||||||||||||||||| ||||||||||||||||||||||| |||||||| ||||||
Sbjct 957 ACCATAGGACCGGTTCTTATCCATGTCGTGACTGAGAAAGGTCGTGGATATCCTTACGCA 1016
Query 988 GAGGGAGCTGATGACAAGTATCATGGAGTTTTAAAATTCGAACCAGCAACAGGTAAACAG 1047
||| |||||||||||||||||||||||||||||||||| || |||| |||||||||||||
Sbjct 1017 GAGAGAGCTGATGACAAGTATCATGGAGTTTTAAAATTTGATCCAGAAACAGGTAAACAG 1076
Query 1048 TTCAAAAACATTTCCAAGACTCAGTTTTACACTTCCTGTTTTGTGGAGGCCTTGACTGCG 1107
|||||||| |||||||||||||||| ||||||||||||||||||||||||||||| |||
Sbjct 1077 TTCAAAAATATTTCCAAGACTCAGTCTTACACTTCCTGTTTTGTGGAGGCCTTGATTGCA 1136
Query 1108 GAAGCAGAGGCAGACAAAGATATTGTTGCCATTCATGCAGCCACGGGAGGTGGAACAATG 1167
||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||
Sbjct 1137 GAAGCAGAGGCAGACAAAGATATTGTTGCCATTCATGCAGCCATGGGAGGTGGAACCATG 1196
Query 1168 TTGAATCTCTTCGAGAA-CCGCTTTCCTACAAGGTGTTTCGATGTTGGCATAGCAGAACA 1226
|||||||||||||| || ||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1197 TTGAATCTCTTCGA-AAGCCGCTTTCCTACAAGGTGTTTCGATGTCGGCATAGCAGAACA 1255
Query 1227 ACATGCAGTTACTTTCGCTGCTGGTCTTGCTTGCGAAGGACTTAGGCCCTTTTGTACAAT 1286
|||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 1256 ACATGCAGTTACCTTCGCTGCTGGTCTTGCTTGCGAAGGACTTAAGCCCTTTTGTACAAT 1315
Query 1287 CTACTCTTCTTTCATGCAACGGGCTTATGATCAAGTTGTACATGATGTTGATCTACAGAA 1346
|||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1316 CTACTCATCTTTCATGCAACGGGCATATGATCAAGTTGTACATGATGTTGATCTACAGAA 1375
Query 1347 ACTACCTGTGAGGTTTGCAATCGATAGAGCTGGACTTGTTGGAGCTGATGGTCCAACACA 1406
||| |||||||| |||||||| |||||||| |||||| | ||||| ||||||||||||||
Sbjct 1376 ACTGCCTGTGAGATTTGCAATAGATAGAGCAGGACTTATGGGAGCAGATGGTCCAACACA 1435
Query 1407 TTGTGGAGCATTTGATGTGACGTTTATGGCATGTCTTCCAAACATGATAGTTATGGCTCC 1466
|||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||
Sbjct 1436 TTGTGGAGCATTTGATGTGACGTTTATGGCATGTCTACCAAACATGATAGTAATGGCTCC 1495
Query 1467 ATCTGATGAAGCAGAGCTTTTTAACATGGTTGCAACCGCTGCAGCTATTGATGACCGTCC 1526
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1496 ATCTGATGAAGCAGAGCTTTTTAACATGGTTGCAACCGCTGCAGCTATTGATGACCGTCC 1555
Query 1527 TTCTTGCTTTCGATATCATAGAGGAAACGGTATCGGTGTTTCACTTCCTCCAGGCAACAA 1586
||||||||||||||||||||||||||| ||||| ||||||||||||||||| || |||||
Sbjct 1556 TTCTTGCTTTCGATATCATAGAGGAAATGGTATTGGTGTTTCACTTCCTCCTGGTAACAA 1615
Query 1587 AGGTGTCCCTCTTCAGATTGGGAAAGGTAGGATACTAAGGGAAGGCGAGAGGGTTGCGCT 1646
||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||
Sbjct 1616 AGGTGTCCCTCTTCAGATTGGGAGAGGTAGGATACTAAGGGACGGCGAGAGGGTTGCGCT 1675
Query 1647 TTTGGGCTACGGATCAGCAGTTCAAAGATGTTTAGAGACTGCTTCTATGCTTAGCGAACG 1706
||||||||| |||||||| || ||||||||||||||| |||| |||||||| ||||||||
Sbjct 1676 TTTGGGCTATGGATCAGCGGTGCAAAGATGTTTAGAGGCTGCATCTATGCTAAGCGAACG 1735
Query 1707 CGGATTAAAGATAACTGTAGCGGATGCAAGATTTTGTAAGCCATTAGATGTTGCTCTCAT 1766
||||||||||||||| ||||||||||||||||| |||||||| |||||||||||||||||
Sbjct 1736 CGGATTAAAGATAACAGTAGCGGATGCAAGATTCTGTAAGCCGTTAGATGTTGCTCTCAT 1795
Query 1767 TCGTAGCTTAGCTAAATCACACGAGGTTTTAATCACGGTTGAAGAAGGTTCGATTGGAGG 1826
|||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||
Sbjct 1796 TCGTAGCTTAGCTAAATCACACGAGGTTTTGATCACGGTTGAAGAAGGTTCCATTGGAGG 1855
Query 1827 ATTTGGATCGCATGTGGTACAATTTCTTGCACTTGATGGTCTTCTTGACGGAAAGCTCAA 1886
||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||
Sbjct 1856 ATTTGGATCGCATGTGGTACAATTTCTTGCACTTGATGGCCTTCTTGATGGAAAGCTCAA 1915
Query 1887 GTGGAGGCCAATGGTACTACCTGACCGGTATATCGAACACGGATCACCAATGGATCAACT 1946
| | | | | | || | || | || | | | | | | ||||||||||
Sbjct 1916 G-GTAT---A-TCGAAC-A--TG---G--AT--C-A-C-C--A--A----TGGATCAACT 1949
Query 1947 GGCTGAAGCTGGCCTCACAGCGTCTCATATTGCAGCCACAGCACTTAACTTAATGGGAAC 2006
|||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||
Sbjct 1950 AGCTGAAGCTGGCCTCACAGCGTCTCACATTGCAGCCACTGCACTTAACTTAATGGGAAC 2009
Query 2007 ACCTAGAGAAGCCTTGTTTTGGGAGTAATGAGATCTCCAACAG-GTTCTTCAATTCTGTA 2065
|||||||||||| ||||||||||||||| | |||||||| || || || | ||| |
Sbjct 2010 ACCTAGAGAAGCATTGTTTTGGGAGTAACGGGATCTCCATGAGAGTGCT-CT-TTCCACA 2067
Query 2066 AGAGAG-TGTATCGAGAAAACCCACTTAGAAGAAGTATATATTGTAGTTATTTAACATCT 2124
| | | | |||||||| ||||| ||||||||||| ||||||| ||||||| ||||||||
Sbjct 2068 AAAAACCTATATCGAGAGAACCCGCTTAGAAGAAGGATATATTATAGTTATATAACATCT 2127
Query 2125 TGAATAAATTCATTCACATTCAAGAATGAGTTTGTGTGTGTAGTGCTTATATCTCGTTTC 2184
||||||||||||||||||||||||||||| ||| |||||||| |||||||||||||||||
Sbjct 2128 TGAATAAATTCATTCACATTCAAGAATGA-TTT-TGTGTGTATTGCTTATATCTCGTTTC 2185
Query 2185 AACTAGGCTAAGAAATAGAACAAATGGCATTGGCGTTTTCATC 2227
|||||||||||||||||||||||||||| ||| ||||||||||
Sbjct 2186 AACTAGGCTAAGAAATAGAACAAATGGCTTTGACGTTTTCATC 2228
> AT4G15560.1 | Symbols: CLA1, DEF, CLA, DXS, DXPS2 | Deoxyxylulose-5-phosphate
synthase | chr4:8883907-8887565 FORWARD LENGTH=2776
Length=2776
Score = 1055 bits (571), Expect = 0.0
Identities = 1029/1247 (83%), Gaps = 44/1247 (4%)
Strand=Plus/Plus
Query 817 GGGACTGGTTCAACTCTGTTTGAAGAACTTGGTCTCCATTATGTTGGTCCAGTTGATGGG 876
|||||||| || | |||||||||||||| ||||| | ||| |||||||||||||||||
Sbjct 1254 GGGACTGGATCGTCACTGTTTGAAGAACTCGGTCTTTACTATATTGGTCCAGTTGATGGG 1313
Query 877 CACAACATAGATGATCTGGTCTCCATTCTTGAAA-AAGTAAAAAGCACCA-AATCCATAG 934
||||||||||||||| |||| |||||||| ||| |||| || || |||| || ||| ||
Sbjct 1314 CACAACATAGATGATTTGGTAGCCATTCTT-AAAGAAGTTAAGAGTACCAGAA-CCACAG 1371
Query 935 GACCGGTTCTTATTCATGTCGTGACTGAGAAAGGTCGCGGATATCCCTACGCAGAGGGAG 994
|||| || ||||||||||| ||||| ||||||||||| || ||||| ||||| ||| |||
Sbjct 1372 GACCTGTACTTATTCATGTGGTGACGGAGAAAGGTCGTGGTTATCCTTACGCGGAGAGAG 1431
Query 995 CTGATGACAAGTATCATGGAGTTTTAAAATTCGAACCAGCAACAGGTAAACAGTTCAAAA 1054
|||||||||| || ||||| ||| | ||||| || |||||||| |||| |||||||||||
Sbjct 1432 CTGATGACAAATACCATGGTGTTGTGAAATTTGATCCAGCAACGGGTAGACAGTTCAAAA 1491
Query 1055 AC-ATTTCCAAGACTCAGTTTTACACTTCCTGTTTTGTGGAGGCCTT-GACTGCGGAAGC 1112
| | | |||||||| | |||||| | | |||| |||||| || | | || |||||
Sbjct 1492 -CTACTAATAAGACTCAATCTTACACAACTTACTTTGCGGAGGCATTAGTC-GCAGAAGC 1549
Query 1113 AGAGGCAGACAAAGATATTGTTGCCATTCATGCAGCCACGGGAGGTGGAACAATGTTGAA 1172
||||| |||||||||| | ||||| ||||||||||||| |||||||||||| ||| ||
Sbjct 1550 AGAGGTAGACAAAGATGTGGTTGCGATTCATGCAGCCATGGGAGGTGGAACCGGGTTAAA 1609
Query 1173 TCTCTT-CGA-GAACCGCTTTCCTACAAGGTGTTTCGATGTTGGCATAGCAGAACAACAT 1230
|||||| | | | | |||| || ||||| ||||||||||| || ||||| ||||||||
Sbjct 1610 TCTCTTTCAACGT-C-GCTTCCCAACAAGATGTTTCGATGTAGGAATAGCGGAACAACAC 1667
Query 1231 GCAGTTACTTTCGCTGCTGGTCTT-GCTTGCGAAGGACTTAGGCCCTTTTGTACAATCTA 1289
||||||||||| ||||| ||| || || || ||||| |||| ||||| ||| |||||||
Sbjct 1668 GCAGTTACTTTTGCTGCGGGT-TTAGCCTGTGAAGGCCTTAAACCCTTCTGTGCAATCTA 1726
Query 1290 CTCTTCTTTCATGCAACGGGCTTATGATCAAGTTGTACATGATGTTGATCTACAGAAACT 1349
|| ||||||||||| || |||||||| || ||||| |||||||||||| | || ||| |
Sbjct 1727 TTCGTCTTTCATGCAGCGTGCTTATGACCAGGTTGTCCATGATGTTGATTTGCAAAAATT 1786
Query 1350 ACCTGTGAGGTTTGCAATCGATAGAGCTGGACTTGTTGGAGCTGATGGTCCAACACATTG 1409
||| ||||| |||||||| |||||||||||||| ||||||||||||||||| ||||||||
Sbjct 1787 ACCGGTGAGATTTGCAATGGATAGAGCTGGACTCGTTGGAGCTGATGGTCCGACACATTG 1846
Query 1410 TGGAGCATTT-GATGTGACGTTTATGGCATGTCTTCCAAACATGATAGTTATGGCTCCAT 1468
|||||| ||| |||||||| |||||||| |||||||| ||||||||||| ||||||||||
Sbjct 1847 TGGAGC-TTTCGATGTGACATTTATGGCTTGTCTTCCTAACATGATAGTGATGGCTCCAT 1905
Query 1469 CTGATGAAGCAGAGCTTTTTAACATGGTTGCAACCGCTGCAGCTATTGATGACCGTCCTT 1528
| ||||||||||| || ||||||||||||||||| |||| || |||||||| |||||||
Sbjct 1906 CAGATGAAGCAGATCTCTTTAACATGGTTGCAACTGCTGTTGCGATTGATGATCGTCCTT 1965
Query 1529 CTTGCTTTC-GATATCATAGAGGAAACGGTATCGGTGTTTCACTT-CCTCCAGGCAACAA 1586
|||| |||| | || | |||||| |||||||| || ||| || || ||||| || |||||
Sbjct 1966 CTTG-TTTCCGTTACCCTAGAGGTAACGGTATTGGAGTTGCA-TTACCTCCCGGAAACAA 2023
Query 1587 AGGTGTCCCTCTTCAGATTGGGAAAGGTAGGATACTAAGGGAAGGCGAGAGGGTTGCGCT 1646
|||||| || || |||||||||||||||| || ||| |||||| ||||| |||||| |
Sbjct 2024 AGGTGTTCCAATTGAGATTGGGAAAGGTAGAATTTTAAAGGAAGGAGAGAGAGTTGCG-T 2082
Query 1647 T-TTGGGCTACGGATCAGCAGTTCAAAGATGTTTAG-AGACTGCTTCTA-TGCTT-AGCG 1702
| ||||| || || ||||||||||| || ||||||| || | ||| || |||| | |
Sbjct 2083 TGTTGGGTTATGGCTCAGCAGTTCAGAGCTGTTTAGGAG-CGGCTG-TAATGCTCGAA-G 2139
Query 1703 AACGCGGATTAAA-GATAACTGTAGCGGATGCAAGATTTTGTAAGCCATTAGAT-GTTGC 1760
||||||||||||| | ||||||||||||||||| | ||||| |||||||| || || ||
Sbjct 2140 AACGCGGATTAAACG-TAACTGTAGCGGATGCACGGTTTTGCAAGCCATTGGACCGT-GC 2197
Query 1761 TCTCATTCGTAGCTTAGCTAAATCACACGAGGTTTTAATCACGGTTGAAGAAGGTTCGAT 1820
||||||||| ||||||||||| || ||||||||| | |||||||||||||||||||| ||
Sbjct 2198 TCTCATTCGCAGCTTAGCTAAGTCGCACGAGGTTCTGATCACGGTTGAAGAAGGTTCCAT 2257
Query 1821 TGGAGGATTTGGATCGCATGTGGTACAATTTCTTGCACTTGATGGTCTTCTTGACGG-AA 1879
|||||| ||||| ||||| || || || |||||||| || |||||||||||||| || ||
Sbjct 2258 TGGAGGTTTTGGCTCGCACGTTGTTCAGTTTCTTGCTCTCGATGGTCTTCTTGATGGCAA 2317
Query 1880 AGCTCAAGTGGAGGCCAATGGTACTACCTGACCGGTATATCGAACACGGAT-CACCAA-T 1937
| ||||||||||| ||||||||||| ||||| || || || || ||||| | ||||| |
Sbjct 2318 A-CTCAAGTGGAGACCAATGGTACTGCCTGATCGATACATTGATCACGG-TGCACCAGCT 2375
Query 1938 GGATCAACTGGCTGAAGCTGGCCTCACAGCG-TCTCATATTGCAGCCACAGCACTTAACT 1996
| ||||||| ||||||||||| |||| || ||||| || ||||| || ||||||||||
Sbjct 2376 G-ATCAACTAGCTGAAGCTGGACTCAT-GCCATCTCACATCGCAGCAACCGCACTTAACT 2433
Query 1997 TAATGGGAACACCTAGAGAAGC-CTTGTTTTGGGAGTAATGAGATCT 2042
|||| || |||| || ||||| || |||||| |||||| || ||||
Sbjct 2434 TAATCGGTGCACCAAGGGAAGCTCT-GTTTTGAGAGTAA-GA-ATCT 2477
Score = 592 bits (320), Expect = 7e-168
Identities = 535/640 (84%), Gaps = 10/640 (2%)
Strand=Plus/Plus
Query 179 TTGCAGAGAAAGGTGAATATTATTCAAGTAGACCACCAACTCCTTTACTGGACACAATCA 238
|||||||||| |||||||||||||||| |||||||||||||| ||||| ||||| || |
Sbjct 493 TTGCAGAGAAGGGTGAATATTATTCAAACAGACCACCAACTCCATTACTTGACACTATTA 552
Query 239 ACCATCCAATGCACATGAAGAATCTGTCCATCAAAGAACTCAAAGTTCTTTCTGACGAGT 298
|| | ||||| |||||||| ||||| || |||| ||||| ||| |||||||| |||
Sbjct 553 ACTACCCAATCCACATGAAAAATCTTTCTGTCAAGGAACTGAAACAACTTTCTGATGAGC 612
Query 299 TGAGATCTGATGTTATCTTCAATGTTTCAAAAACTGGAGGACACTTGGGTTCGAA-TCTG 357
||||||| || || ||||| ||||| || ||||| || ||||| ||||| || || |||
Sbjct 613 TGAGATCAGACGTGATCTTTAATGTGTCGAAAACCGGTGGACATTTGGGGTC-AAGTCTT 671
Query 358 GGTGTTGTTGAGCTCACTGTGGCCCTTCATTACATCTTCAATACTCCTCAAGATAAGATC 417
|||||||| ||||| |||||||| ||||||||||| ||||||||||| ||||| |||||
Sbjct 672 GGTGTTGTGGAGCTTACTGTGGCTCTTCATTACATTTTCAATACTCCACAAGACAAGATT 731
Query 418 CTTTGGGATGTTGGTCATCAGTCTTATCCTCACAAGATTCTAAC-GGGAAGAAGAGGAAA 476
|||||||||||||||||||||||||||||||| |||||||| || |||| ||||||||||
Sbjct 732 CTTTGGGATGTTGGTCATCAGTCTTATCCTCATAAGATTCTTACTGGGA-GAAGAGGAAA 790
Query 477 GATGAAGACAATAAGGCAGACCGATGGCCTCTCCGGCTACACCAAGA-GAAGAGAGAGTG 535
|||| ||||| ||||| ||| |||| ||||| || | |||||| | || |||||||||
Sbjct 791 GATGCCTACAATGAGGCAAACCAATGGTCTCTCTGGTTTCACCAA-ACGAGGAGAGAGTG 849
Query 536 AGCATGACTCCTTTGGCACCGGGCACAGTTCTACCACAATATCTGCAGGCTTAGGGATGG 595
| ||||| | |||||| || || ||||| || |||||||||||||| || ||||| ||||
Sbjct 850 AACATGATTGCTTTGGTACTGGACACAGCTCAACCACAATATCTGCTGGTTTAGGAATGG 909
Query 596 CTGTGGGCAGGGATTTGAAGGGGATGAACAACAGCGTGGTTGCGGTTATAGGCGATGGCG 655
| || || |||||||||||||||| |||||||| |||||||| || || || ||||| |
Sbjct 910 CGGTAGGAAGGGATTTGAAGGGGAAGAACAACAATGTGGTTGCTGTGATTGGTGATGGTG 969
Query 656 CAATGACAGCTGGACAAGCTTATGAAGCTATGAACAATGCTGGCTA-CTTAGACTCTGAC 714
| ||||| || ||||| ||||||||||| |||||||| || || || || |||||||||
Sbjct 970 CGATGACGGCAGGACAGGCTTATGAAGCCATGAACAACGCCGGATATCT-AGACTCTGAT 1028
Query 715 ATGATTGTGATTCTCAACGACAATAAACAAGTCTCTTTGCCTACTGCTAACTTTG-ATGG 773
|||||||||||||| || ||||| || |||||||| || ||||| |||| ||||| ||||
Sbjct 1029 ATGATTGTGATTCTTAATGACAACAAGCAAGTCTCATTACCTACAGCTA-CTTTGGATGG 1087
Query 774 ACCAACTCCACCTGTTGGAGCTTTGAGCTGTGCTCTAAGT 813
||||| |||||||||||| || |||||| ||||||| |||
Sbjct 1088 ACCAAGTCCACCTGTTGGTGCATTGAGCAGTGCTCTTAGT 1127
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 110491399545
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5