BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg479757
Length=1236
Score E
Sequences producing significant alignments: (Bits) Value
AT3G22421.1 | Symbols: | F-box and associated interaction doma... 1402 0.0
AT3G22940.1 | Symbols: | F-box associated ubiquitination effec... 763 0.0
AT4G33290.1 | Symbols: | F-box and associated interaction doma... 292 4e-78
AT3G23680.1 | Symbols: | F-box associated ubiquitination effec... 178 1e-43
AT4G10740.1 | Symbols: | F-box and associated interaction doma... 154 2e-36
AT3G23685.1 | Symbols: | F-box associated ubiquitination effec... 139 6e-32
AT3G04250.1 | Symbols: | F-box associated ubiquitination effec... 122 6e-27
AT5G41500.1 | Symbols: | F-box and associated interaction doma... 111 1e-23
AT5G36200.1 | Symbols: | F-box and associated interaction doma... 104 2e-21
AT5G36730.1 | Symbols: | F-box and associated interaction doma... 100 3e-20
AT5G36820.1 | Symbols: | F-box and associated interaction doma... 100 3e-20
AT5G41510.1 | Symbols: | F-box and associated interaction doma... 93.5 4e-18
AT3G24580.1 | Symbols: | F-box and associated interaction doma... 73.1 6e-12
AT4G09790.1 | Symbols: | pseudogene of the F-box family protei... 54.7 2e-06
> AT3G22421.1 | Symbols: | F-box and associated interaction domains-containing
protein | chr3:7949116-7950396 REVERSE LENGTH=1281
Length=1281
Score = 1402 bits (759), Expect = 0.0
Identities = 1101/1255 (88%), Gaps = 68/1255 (5%)
Strand=Plus/Plus
Query 7 ATGACGGCGATAATCTCCCATCTTCCAATGGAGTTGTTAGATGAGATAATCTCTAAACTT 66
|||||| ||| |||||| |||||||||| |||||| ||||||||||||||||||| | |
Sbjct 1 ATGACGACGACAATCTCTCATCTTCCAACGGAGTTATTAGATGAGATAATCTCTAGAGTA 60
Query 67 TCATCATCA-TCTACGAGAGCAGTGAGATTAACTTGCAAAAATTGGGACTCTTTATTCAA 125
||| | | |||||||||||||||||||| ||||||||||| |||||||||||||||||
Sbjct 61 CCATTA-AAGTCTACGAGAGCAGTGAGATTGACTTGCAAAAACTGGGACTCTTTATTCAA 119
Query 126 AAATC-GAGGCCTTATGAAAGAAGAAGCAGCAGCAAAGGAAGGAGAGTCTCGGATGATCG 184
||| | || || |||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 120 AAACCGGA-GCTTTATGAAAGAAGAAGCAGCAGCAAAGGAAGGAGAGTCTAGGATGATCG 178
Query 185 TGTTGATGGATAACAATCTGTGTT-CAGTGAGCATCTTCTTCAATGGAATTGACATTGAT 243
||||||||||||| || |||| || || ||||||||||||||||||||||||||||||||
Sbjct 179 TGTTGATGGATAAAAACCTGT-TTGCAATGAGCATCTTCTTCAATGGAATTGACATTGAT 237
Query 244 CCATCTGCAGAGCAAAAAGGTAAACTTACTTGCCTATACGATGATTCAGAACAAGTCAAG 303
|||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||
Sbjct 238 CCATCTGCAGAGCAAAGAGGTAAACTTACTTGCCTATACGACGATTCAGAACAAGTCAAG 297
Query 304 ATATCTCAAGTCTTTCACTGCGAGGGTTTGTTACTATGCGTCATCAAAGACGATAAGGGT 363
|||||||||||||||||||||||||||||||||||||||||| | ||||||||||| ||
Sbjct 298 ATATCTCAAGTCTTTCACTGCGAGGGTTTGTTACTATGCGTCTTGGAAGACGATAAGTGT 357
Query 364 AGTCTTGTTGTTTGGAATCCGTATTTGGGACAAACAAGGTGGATCGAACCCAGATATTTT 423
||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||
Sbjct 358 AGTCTTGTTGTTTGGAATCCGTATTGGGGACAAACAAGGTGGATCGAACCTAGATATTTT 417
Query 424 TTCCGAATACCCGA-TAGATATGACAGGTACATGTACG----C--TCTTGGATACAATAA 476
| ||| |||| || | | |||| |||||||||||||| | |||||||||||||||
Sbjct 418 TCCCGGATACA-GAATTGTTATGGCAGGTACATGTACGTGTACGCTCTTGGATACAATAA 476
Query 477 TAAGAGTCGCAGCCACAAAATCTTGAGGTTTATAGATGGTCGTCAATTCGATTGCC---- 532
||||||||| || ||||||||||||||||||||||||||| | || ||||||| ||
Sbjct 477 TAAGAGTCGTAGTCACAAAATCTTGAGGTTTATAGATGGT-G-CA-TTCGATTTCCCTTT 533
Query 533 --GGTATGAAATCTACGATTTTGACTTTAATTTATGGACGACTCTTGACGTTACTCCACA 590
|||||||||||||||||||||||| | |||| ||||||||||||||||||||||||||
Sbjct 534 TTGGTATGAAATCTACGATTTTGACTCTGATTTGTGGACGACTCTTGACGTTACTCCACA 593
Query 591 CTGGTGTT-TAAATTAT---TGCC-GTGGTT-TTCGTAACTATGGTGTTACTCTCAAGGG 644
|||| || |||||| | | || |||||| || |||| ||||||||||||||||||
Sbjct 594 ATGGT-TTATAAATT-TCCCTCCCCGTGGTTGTTA-TAACCGTGGTGTTACTCTCAAGGG 650
Query 645 TAACACTTACTGGTGTGCTATAAGAAGGAACTCAAACGCT--TTGC---GT-G-T-T-GA 695
||||||||||||||||||||||||||||| |||||| || ||| || | | | ||
Sbjct 651 AAACACTTACTGGTGTGCTATAAGAAGGAAGTCAAACACTAATTGGTTTGTTGATCTTGA 710
Query 696 TCACATAATCTGTTTTGATTTTACAAGTGAGAGATTCGGTCCGCTTATGTATTTGCCGTT 755
|||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||
Sbjct 711 TCACATAATCTGTTTTGATTTTACAAGTGAGAGATTTGGTCCGCTTATGCCTTTGCCGTT 770
Query 756 TATTAGAGATAGGTGTGCAAGCCTTGTGACTCTATCTTGTGTTAGAGAAGAGAAGCTTGC 815
| ||||| ||| || | ||||||||||||||||||||||||||||||||||||||||||
Sbjct 771 TGTTAGATATACGTCCGGAAGCCTTGTGACTCTATCTTGTGTTAGAGAAGAGAAGCTTGC 830
Query 816 GGTTTTATTTTGTTACTATGATACTGTTGAGGTATGGATTACGACTAAGATTGAGGCCGA 875
|||||| |||||| || ||| |||||||||||||||||||||||||||||||||| | ||
Sbjct 831 GGTTTTGTTTTGTAACAATGCTACTGTTGAGGTATGGATTACGACTAAGATTGAGACTGA 890
Query 876 AAAGATGTCGTGGAGCAAGTTCTTGACAGTGAAAATGTATGTTGACCTTCTGGATTCACA 935
||||| |||||||||||||||||||||||||| |||||||||||||||||||| |
Sbjct 891 CAAGATTTCGTGGAGCAAGTTCTTGACAGTGAATATGTATGTTGACCTTCTGGA---A-- 945
Query 936 TGCAGCAGGGAGTTTTTTCATTGACGAGCTGAAGAAAGTTGCTATGATTTTTGATAGACC 995
| | | |||||||||||||||||| | ||||||||||||||||||||||||| |||
Sbjct 946 -G--G--G--AGTTTTTTCATTGACGAGGTAAAGAAAGTTGCTATGATTTTTGATATACC 998
Query 996 GATGCATCATCGCGACACAGTTCACATCGTGGGAGAGGCTGGATACGTTAAAGAAGTGGA 1055
|||| | ||||||| |||||| |||||||||||||||||||| ||||||||||| || |
Sbjct 999 GATG-A--ATCGCGAGACAGTTTACATCGTGGGAGAGGCTGGAAACGTTAAAGAACTGCA 1055
Query 1056 TCTAGGAGAACCTG---ATG---ACAAATACTTTTTCCCACT-T--GTGTGCTCTTATGT 1106
||||||| |||||| ||| ||||| |||||| |||||| | ||||||||||||||
Sbjct 1056 TCTAGGACAACCTGTTGATGTTGACAAACACTTTTCCCCACTATTTGTGTGCTCTTATGT 1115
Query 1107 TCCAAGTTTAGTACAAATCAAGAAACCTGCAGGAGGCCAAAGGAAACAACAAAGCAGTTT 1166
|||||||||||| ||||||||| ||||| ||||| |||||||||||||| |||||||| |
Sbjct 1116 TCCAAGTTTAGTGCAAATCAAGCAACCTCCAGGATGCCAAAGGAAACAAGAAAGCAGTCT 1175
Query 1167 AGAAAAACGTCGATGTGATCA--AAA-CATATCGAGACTTATCGCACATGAAGAG 1218
||||||||||||||||||| | ||| |||||| |||||||| ||||||||||||
Sbjct 1176 AGAAAAACGTCGATGTGATGATGAAAACATATCTAGACTTATTGCACATGAAGAG 1230
> AT3G22940.1 | Symbols: | F-box associated ubiquitination effector
family protein | chr3:8131468-8132706 FORWARD LENGTH=1239
Length=1239
Score = 763 bits (413), Expect = 0.0
Identities = 972/1225 (79%), Gaps = 105/1225 (9%)
Strand=Plus/Plus
Query 43 TTAGATGAGATAATCTCTAA-ACTTTCA-TCATCA-TCTACGAGAGCAGTGAGATTAACT 99
||||| |||||| |||| || |||| || | | | ||||||||||||||||||| |||
Sbjct 7 TTAGAAGAGATACTCTC-AAGACTTCCATTGA--AGTCTACGAGAGCAGTGAGATCGACT 63
Query 100 TGCAAAAATTGGGACTCTTTATTCAAAAATC-GAGGCCTTATGA-AAGAAGAAGCAGCAG 157
|||||||| |||||||||||||||||||||| || || |||| | | ||| ||||||||
Sbjct 64 TGCAAAAAGTGGGACTCTTTATTCAAAAATCGGA-GCTTTATTAGTA-AAGCAGCAGCAG 121
Query 158 CAAAG-GAAGGAGAGTCTCGGATGATCGTGTTGATGGATAACAATCTGT-GTTCAGTGAG 215
| ||| ||||||||||||| |||| |||||||||||||| ||||||| | || ||||||
Sbjct 122 C-AAGAGAAGGAGAGTCTCAGATGGTCGTGTTGATGGATCACAATCT-TCATTTAGTGAG 179
Query 216 CATCTTCTTCAATGGAATTGACATTGATCCATCTGCAGAGCA-AAAAGGTAAACTTACTT 274
| |||||||| | | || |||| | |||| |||| | |||||||||| || ||
Sbjct 180 CTTCTTCTTC----G----G-CAGTGATACTTCTGTAGAG-ATTAAAGGTAAACGTATTT 229
Query 275 GCCT--A-TACGA-T--GATTCAGAACAAGTCAAGATATCTCAAGTCTTTCACTGCGAGG 328
| || | |||| | ||||||||||||||||||||||||||||| |||||||| ||||
Sbjct 230 GTCTAAACGACGATTCAGATTCAGAACAAGTCAAGATATCTCAAGTTTTTCACTGTGAGG 289
Query 329 GTTTGTTACTATGCGTCATCAAAGACGATAAGGGTAGTCTTGTTGTTTGGAATCCGTATT 388
||||||| |||| || | ||||| ||||| |||||||||||||||||| |||||||
Sbjct 290 GTTTGTTGTTATGTATCTTGAAAGATGATAACTTTAGTCTTGTTGTTTGGAACCCGTATT 349
Query 389 TGGGACAAACAAGGTGGATCGAACCCAGATATTTTTTCCGAA-TACCCGATAGATATGAC 447
||||||||||||||||||| ||||||||| || |||| ||| ||||| | ||| ||||
Sbjct 350 GGGGACAAACAAGGTGGATCAAACCCAGATGTTCTTTC-GAAATACCCCAGGGATGTGAC 408
Query 448 AGGTACATGTACGCTCTTGGATACAATAATAAGAGTCGCAGCCACAAAATCTTGAGGTTT 507
| ||||| ||||||| |||||||| | || ||||| |||| |||||| ||||||||||||
Sbjct 409 ATGTACAGGTACGCTATTGGATACGACAACAAGAGACGCAACCACAAGATCTTGAGGTTT 468
Query 508 ATAGATGGTCG--T-CAATT-C----GA-------TTGCC--G-G-TATGAAATCTACGA 548
|||||| | | | | ||| | || ||| | | ||||||||||| ||
Sbjct 469 ATAGATTAT-GAATTCCATTACCCTCGAGACAACGTTGTTTTGTGGTATGAAATCTATGA 527
Query 549 TTTTGACTTTAATTTATGGACGACTCTTGACGTTACT-C-C-ACACTGGT-GTTTAAATT 604
|||||| | | ||||||||||||||||||| |||||| | | ||| |||| | | |||||
Sbjct 528 TTTTGAGTCTGATTTATGGACGACTCTTGATGTTACTACTCCACATTGGTTGAT-AAATT 586
Query 605 ATTGCCGTGGTTTTCGTAACTATGGTGTTACTCTCAAGGGTAACACTTACTGGTGTGCTA 664
| |||| ||| |||||||||||||||||| |||||||||||||||||||
Sbjct 587 ---G---TGGT------AACCGTGGTGTTACTCTCAAGGGAAACACTTACTGGTGTGCTA 634
Query 665 TAAGAAGGAACTCAAACGCTTTG-CG---TGTTGATCACATAATCTGTTTTGATTTTACA 720
|| ||||||||| || |||| | || |||||| ||||||||||||||||| |||
Sbjct 635 AAAAAAGGAACTCTGAC-CTTTTTCTCAATGCTGATCATATAATCTGTTTTGATTTCACA 693
Query 721 AGTGAGAGATTCGGTCCGCTTATG-TATTTGCCGTTTATTAGAGATAGG-TGTGCAAGCC 778
|||||||| || ||||||||| || | ||||||||||| | || | || || | |
Sbjct 694 AGTGAGAGGTTTGGTCCGCTTCTGCT-TTTGCCGTTTAGT-GATTT-GGATG-GT--G-- 745
Query 779 TTGTGACTCTATCTTGTGTTAGAGAAGAGAAGCTTGCGGTTTTATTTTGTTACTATGATA 838
|||| |||||| ||||||||||||| ||||||||||||| |||| ||||| || | |||
Sbjct 746 TTGTTACTCTAGCTTGTGTTAGAGAGGAGAAGCTTGCGGCTTTAGTTTGTCACGAGGATG 805
Query 839 CTGTTGAGGTATGGATTACGACTAAGATTGAGGCCGAAA-AGATGTCGTGGAGCAAGTTC 897
||||||||| |||||||||| ||||||||||||| || || | | |||||||||||||
Sbjct 806 TTGTTGAGGTTTGGATTACGATTAAGATTGAGGCC-AATGAGGTATTGTGGAGCAAGTTC 864
Query 898 TTGACAGTGAAAAT-G-TATG--T--TGACCTTCTG-GATTCACATG-CAGCAGGG-AGT 948
||||||||||| | | | || | ||| ||| | | ||||| || || | || |||
Sbjct 865 TTGACAGTGAATGTTGATTTGGGTGATGAGATTCCGAG-TTCAC-TGACAT-ATGGTAGT 921
Query 949 TTTTTCATTGACGAGCTGAAGAAAGTTGCTATGATTTTTGATAGACCGATGCATCATCG- 1007
|||||||| |||||| |||||||||||||||||||||||||| | | || ||| ||
Sbjct 922 TTTTTCATCGACGAGGAGAAGAAAGTTGCTATGATTTTTGATAAAACTTTGGATCG-CGG 980
Query 1008 CGACACAGTTCACATCGTGGGAGAGGCTGGATACGTTAAAGAAGTGGATCTAGGAGAACC 1067
|||||||||||||||| |||||||||||||||| | | | |||| ||||| ||||||||
Sbjct 981 CGACACAGTTCACATCATGGGAGAGGCTGGATATGGTGGACAAGTTGATCTCGGAGAACC 1040
Query 1068 TGATGACAAAT-ACTTTTTCCCACTTGTGTGCTCTTATGTTCCAAGTTTAGTACAAATCA 1126
| | | ||| || || |||||||||||||||||||||||| |||||||| |||||||
Sbjct 1041 GGTTAATAAAAGACGTTG-CCCACTTGTGTGCTCTTATGTTCCGAGTTTAGTGCAAATCA 1099
Query 1127 AGAAACCTGCAGGAGGCCAAAGGAAACAACAAAGCA-GTTTAGAAAAACGTCGATGTGAT 1185
|||||||||||||| |||||||||||| ||||||| ||| |||||| |||| || || |
Sbjct 1100 AGAAACCTGCAGGATTCCAAAGGAAACAGCAAAGCAAGTT-AGAAAAGCGTCAATATGTT 1158
Query 1186 CAAAACATATCGAGACTTATCGCAC 1210
| ||||||||||| |||| |||||
Sbjct 1159 CGAAACATATCGAAACTTCGCGCAC 1183
> AT4G33290.1 | Symbols: | F-box and associated interaction domains-containing
protein | chr4:16049573-16050865 FORWARD LENGTH=1293
Length=1293
Score = 292 bits (158), Expect = 4e-78
Identities = 705/949 (74%), Gaps = 117/949 (12%)
Strand=Plus/Plus
Query 19 ATCTCCCATCTTCCAATGGAGTTGTTAGATGAGATAAT-CTCT-AA-ACTTT-CATCATC 74
||| || ||||||||| ||| ||| |||| ||| ||| || | || ||| ||| | |
Sbjct 4 ATCACCGATCTTCCAAAGGATTTGATAGA--AGA-AATCCTTTCAAGGGTTTCCATGA-C 59
Query 75 ATCTACGAGAGCAGTGAGATTAACTTGCAAAAATTGGGACT-CTTTATTCAAAAATCGAG 133
||||| ||||| ||| ||||||||||||||| || ||| | |||||| ||| | | |||
Sbjct 60 ATCTATGAGAGTTGTGCGATTAACTTGCAAAAGTT-GGAATACTTTATCCAATAGT-GAG 117
Query 134 -GCCTTATGAA-A-G-A-A---G--AAG-CAGCAGCAA--AG-GAAGGAGAGTCTCGGAT 179
|| ||| ||| | | | | | ||| | || ||| || |||||||| ||| || |
Sbjct 118 AGCTTTAAGAAGATGCACATTGGTAAAGTTA-CATCAACGAGAGAAGGAGAATCTAGGGT 176
Query 180 GATCGTGTTGATGGATAACAATC-TGTGTTCAGTGAGCATCT-TCTTCAATGGAATTGAC 237
|||| ||||||| ||| |||||| | | || | ||||| || || || |||| | ||||
Sbjct 177 GATCATGTTGATAGATTACAATCTTTTTTTGA-TGAGC-GCTGTCCTC-ATGG-A-TGAC 231
Query 238 ATTGATCCATCTGCAGAGCAAAAAGGTAAACTTACTTGCCTATACGATGATTCAGAACAA 297
||||||||||| |||| ||||||||||||| ||| || || | | ||||||
Sbjct 232 GTTGATCCATCTATAGAGTTTAAAGGTAAACTTAGTTGTCT-TA--A-G-----GAACAA 282
Query 298 GTCAAGATATCTCAAGTCTTTCACTGCGAGGGTTTGTTACTATGCGTCATCAAAGACGAT 357
|||||||||||||||||||||||||| |||||||| || ||||| || | |||||||||
Sbjct 283 GTCAAGATATCTCAAGTCTTTCACTGTGAGGGTTTATTGTTATGCATCTTGAAAGACGAT 342
Query 358 AAGGGTAGTCTTGTTGTTTGGAATCCGTATTTGGGAC-AAACAAGGTGGATCGA-ACCCA 415
| ||| |||||||||||||||||||| || | |||||||||||||| | ||| |
Sbjct 343 AC---TAGGATTGTTGTTTGGAATCCGTATA-GGCAGGAAACAAGGTGGATC-ATACCTA 397
Query 416 GATATTTTTTCCGAATACCCGATA-GATA-TGA-CAGGTA-CATG-TACGCTCTTGGATA 470
|||||| | ||| | || ||| | || ||| || || || | || |||||||||||
Sbjct 398 GATATTCTCACCG--T-CC--ATACG-TAATGAACAA-TATCA-GATATGCTCTTGGATA 449
Query 471 C-A-A-TAATAAGA---G-TCGCAGCCACAAAATCTTGAGGTTTATAGATGGTCG-T-CA 521
| | | |||||| | | ||| |||| ||| | ||||||||||||||| | | | ||
Sbjct 450 CGAGAATAATAA-ATCTGGTCGTAGCCTTAAATTATTGAGGTTTATAGATTATTGCTACA 508
Query 522 ---ATTCG-A--TT-GCCGGTATGAAATCTACGATTTTGACTTTAATTTATGGACGACTC 574
| | | || | || ||||||||||||||||||||| | |||||||||| ||||
Sbjct 509 CCGAAAAGCACATTTGTTGGCATGAAATCTACGATTTTGACTCTGATTTATGGACAACTC 568
Query 575 TTGACGTTACTCCACACTGGTGTTTAAATTAT-TGCCGTGGTTTTCGTAACTATGGTGT- 632
|||| || |||||||| |||| | || || | | |||| || || | | || ||
Sbjct 569 TTGATGTCACTCCACATTGGTATATA--TTGTCTAAT-TGGTCTT-GTGTCCAAGGCGTC 624
Query 633 TACTCTCAA-GGGTAACACTTACTGGTGTGCTATAAGAAGGAA-CTCAAACGCTTTGCGT 690
| ||||||| ||| ||||||||||||||||||| | |||| || |||| | | | ||
Sbjct 625 T-CTCTCAAAGGG-AACACTTACTGGTGTGCTAGA-GAAGAAAACTCAGA---T--G-GT 675
Query 691 GTTGA-TCACATAATCTGTTTTGATTTTACAAGTGAGAGATTCGGTCCGCTTATGTATTT 749
| | ||| ||||||||||||||||||||||| |||||||| ||||||||| || | |
Sbjct 676 -TACAATCATATAATCTGTTTTGATTTTACAAGAGAGAGATTTGGTCCGCTTCTGCCTCT 734
Query 750 GCCGTTTA---TTAGAGATAGGTGTGCAAGCCT-TGTGACT-CTATCTTGTGTTAGAGAA 804
||| ||| ||| ||||| || | | | ||||||| | ||||||||||||||||
Sbjct 735 ACCGGTTAACGTTATAGATAA-TGAATATGAATATGTGACTTC-ATCTTGTGTTAGAGAA 792
Query 805 GAGAAGCTTGCGGTTTTATTTT-GTT-A-CTATG-ATA-C--T--G---TTGAGGTATGG 852
| |||| |||||| ||||||| | | | || ||| | | | ||||| |||||
Sbjct 793 GGGAAGATTGCGGCTTTATTTCAGCACAACGATTCATATCCATATGAGCTTGAGATATGG 852
Query 853 ATTACGACTAAGATTGAGGCCGAAAAGATGTCGTGGAGCAAGTTCTTGA 901
|||||||||||||||||||| |||| | ||||||||| |||||||||||
Sbjct 853 ATTACGACTAAGATTGAGGCGGAAATGGTGTCGTGGAACAAGTTCTTGA 901
> AT3G23680.1 | Symbols: | F-box associated ubiquitination effector
family protein | chr3:8526366-8527173 REVERSE LENGTH=708
Length=708
Score = 178 bits (96), Expect = 1e-43
Identities = 397/534 (74%), Gaps = 53/534 (10%)
Strand=Plus/Plus
Query 701 TAATCTGTTTTGATTTTACAAGTGAGAGATTCGGTCCGCTTATGTATTTGCCGTTTATTA 760
||||||||||||||||||||||||||||||| ||||| ||| || | ||||||||| |
Sbjct 173 TAATCTGTTTTGATTTTACAAGTGAGAGATTTGGTCCTCTTCTGCCTCTGCCGTTTAGT- 231
Query 761 GAGATAGGTGTGCAAGCCT-TGTGAC-TCTATCTTGTGTTAGAGAAGAGAAGCTTGCGGT 818
| | | || | | || | |||| | |||||||||||||||||||||||||||||||
Sbjct 232 G-G-TGGGCATATT-GACTGTATGACGT-TATCTTGTGTTAGAGAAGAGAAGCTTGCGGT 287
Query 819 TTTATTTT-GTTACTATGA-T-AC-TG--T-TGAG---G--T-ATGGATTACGACTAAGA 865
|||| || | || |||| | | | | |||| | | || ||||||||| ||||
Sbjct 288 TTTACTTCAGC-ACGATGAATCAAATCCATATGAGCTTGACTTATCGATTACGACCAAGA 346
Query 866 TTGAGGCCGAAAAGATGTCGTGGAGCAAGTTCTTGACAGTG-AAA-A--TGTATGTTGAC 921
||||| | | | || ||| ||||||||||||||||| |||| ||| | || || ||||
Sbjct 347 TTGAGACTGGAGAGGTGTTGTGGAGCAAGTTCTTGAGAGTGGAAACAGCTGGAT-TTGAT 405
Query 922 C-TTCTGGATTCAC-ATGCAGCAG-GGA-GTTTTTTCATTGACGAGCTGAAGAAAGTTGC 977
|| || ||| | || | | ||| |||| |||||||||||| ||||||||| ||
Sbjct 406 AGTTATG--TTC-CTATT-ATAAATGGAAGTTTCTTCATTGACGAGGAGAAGAAAGTCGC 461
Query 978 TAT-GATTTTTGATAGACCGATGCATCATCGCGACACAGTTCACATCGTGGGAGAGGCTG 1036
|| | |||| || ||| | | | ||||| ||||| || ||||| | ||||||||||
Sbjct 462 CATTGGTTTT-GA-AGATGG--G-A--ATCGCCACACAATTAACATCATTGGAGAGGCTG 514
Query 1037 GATACGTTAAAGA-AGTGGATCTAG--G-AGAACCTG-ATGAC-AAATACTTTTTCCCAC 1090
||||| || | | | ||||||| | | ||| || | ||| ||| | | | ||
Sbjct 515 GATAC-TTGAGGGCATTGGATCTCGTTGGAGATTATGGA-GACCAAAGA-TGTAAGACAG 571
Query 1091 TTGTGTGCTCTTATGTTCCAAGTTTAGTACAAATCAAGAAACCTGCAGGAGGCCAAAGGA 1150
| ||||||||||||||||||||||||| ||||||||| |||||| |||||| |||||
Sbjct 572 ATCTGTGCTCTTATGTTCCAAGTTTAGTGCAAATCAAGCAACCTGAAGGAGGGGAAAGGG 631
Query 1151 AACAACAAAGC-AGTTTAGAAAAACGTCGATGTGATCAAAACATATCGAGACTT 1203
|| || ||||| | || || || | ||||| |||| ||||||| |||||||||
Sbjct 632 AAGAAGAAAGCGAATTG-GAGAAGCTTCGATATGATGAAAACATGTCGAGACTT 684
> AT4G10740.1 | Symbols: | F-box and associated interaction domains-containing
protein | chr4:6617143-6618426 REVERSE LENGTH=1284
Length=1284
Score = 154 bits (83), Expect = 2e-36
Identities = 221/284 (78%), Gaps = 23/284 (8%)
Strand=Plus/Plus
Query 141 GAAAGAAGAAGCAGCAGCAAAGG-A--AGGAGAGTCTCGGATGATCGTGTTGATGGATAA 197
||||||||||| |||||||| || | ||||||| ||| ||||| ||| |||||||| |
Sbjct 150 GAAAGAAGAAGAAGCAGCAAGGGAATTAGGAGAGAATCGAATGATTGTGATGATGGATTA 209
Query 198 CAATC-TGTGTTCAGTGAGCATCTTCTTCAATGGAATTGACATTGATCCATCTGCAGAG- 255
||| | | | || | || ||||| || |||| ||| || | ||||| | | ||
Sbjct 210 CAA-CGTTTATTTAATGGGCATCATCGTCAA-CGAA--AAC-CT-ATCCA--T--AAAGT 259
Query 256 CAAAAAGGTAAACTTACTTGCCTATACGATGATTC-AGAACAAGTCAAGATATCTCAAGT 314
| ||||||||||||||||| ||| ||| ||| | ||||||||||||||||||||||
Sbjct 260 C-TCTAGGTAAACTTACTTGCC--TAC-ATGGTTCTA-AACAAGTCAAGATATCTCAAGT 314
Query 315 CTTTCACTGCGAGGGTTTGTTACTATGCGTCATCAAAGACGATAAGGGTA-GTCTTGTTG 373
|||||| || |||||||| ||| ||||| || | ||||||||| | || | |||| |
Sbjct 315 CTTTCATTGTGAGGGTTTATTATTATGCATCTTAAAAGACGATGATACTAAGA-TTGTGG 373
Query 374 TTTGGAATCCGTATTTGGGACAAACAAGGTGGATCGAACCCAGA 417
||| ||||||||||||||| ||||||||||||||| || |||||
Sbjct 374 TTTTGAATCCGTATTTGGGGCAAACAAGGTGGATCCAAACCAGA 417
> AT3G23685.1 | Symbols: | F-box associated ubiquitination effector
family protein | chr3:8527239-8528317 FORWARD LENGTH=993
Length=993
Score = 139 bits (75), Expect = 6e-32
Identities = 231/301 (77%), Gaps = 31/301 (10%)
Strand=Plus/Plus
Query 533 GGTATGAAATCTACGATTTTGACTTTAATTTATGGACGACTCTTGACGTTACTCCACACT 592
|||||| ||||||||||||||||| | |||||||||| |||||||| || ||||| || |
Sbjct 395 GGTATGGAATCTACGATTTTGACTCTGATTTATGGACTACTCTTGATGTCACTCCGCATT 454
Query 593 GGTGTTTAAATTATTGCCGTGGTTTTCGTAACTATGGTGTTACTCTCAAGGGTAA-CACT 651
|| | | | || | | ||||| ||||| ||| ||| |||| ||||| || |||
Sbjct 455 GGCG--T--A-TA--G-C---GTTTT-GTAACCGTGGCGTTTCTCTTAAGGG-AAGCACG 501
Query 652 TACTGGTGTGCTATAAG-AAGGAAC-TCAAACG-CTTTG-CGTGTT----GATCACATAA 703
|||||||||||| || ||||||| | | | | | || || || |||| | |||
Sbjct 502 TACTGGTGTGCT-GCAGAAAGGAACGT-AGATGTCGATGAAGTCTTGGCCGATCGCTTAA 559
Query 704 TCTGTTTTGATTTTACAAGTGAGAGATTCGGTCCGCTTATGTATTTGCCGTTTATTAGAG 763
|||||||||||||||||||||||||||| ||||||||| || | ||||||||| | | |
Sbjct 560 TCTGTTTTGATTTTACAAGTGAGAGATTTGGTCCGCTTCTGCCTCTGCCGTTTAGT-G-G 617
Query 764 ATAGGTGTGCAAGCCT-TGTGAC-TCTATCTTGTGTTAGAGAAGAGAAGCTTGCGGTTTT 821
| || | | || | |||| | ||||||||||||||||||||||||||||||||||
Sbjct 618 -TGGGCATATT-GACTGTATGACGT-TATCTTGTGTTAGAGAAGAGAAGCTTGCGGTTTT 674
Query 822 A 822
|
Sbjct 675 A 675
Score = 122 bits (66), Expect = 6e-27
Identities = 101/118 (86%), Gaps = 2/118 (2%)
Strand=Plus/Plus
Query 1094 TGTGCTCTTATGTTCCAAGTTTAGTACAAATCAAGAAACCTGCAGGAGGCCAAAGGAAAC 1153
||||||||||||||||||||||||||||||||||| |||||| |||||| || |||||
Sbjct 872 TGTGCTCTTATGTTCCAAGTTTAGTACAAATCAAGCAACCTGAAGGAGGGGAATCGAAAC 931
Query 1154 AACAAAGC-AGTTTAGAAAAACGTCGATGTGATCAAAACATATCGAGACTTATCGCAC 1210
|||||||| | ||||||||| |||||| |||| ||||||| | ||| ||| || |||
Sbjct 932 AACAAAGCGA-TTTAGAAAAGTGTCGATATGATGAAAACATGTTGAGGCTTGTCTCAC 988
> AT3G04250.1 | Symbols: | F-box associated ubiquitination effector
family protein | chr3:1121950-1122828 FORWARD LENGTH=879
Length=879
Score = 122 bits (66), Expect = 6e-27
Identities = 506/705 (72%), Gaps = 83/705 (12%)
Strand=Plus/Plus
Query 533 GGTATGAAATCTACGATTTTGACTTTAATTTATGGACGACTCTTGACGTTACTCCACACT 592
||||||||||||||||| |||| |||||||||| |||||||| || ||||| | |
Sbjct 125 GGTATGAAATCTACGATATTGAAACCGATTTATGGACAACTCTTGATGTCCCTCCATA-T 183
Query 593 GGTGTTTAAATTATTGCCGTGGTTTTCGTAACTATGGTGTTACTCTCAAGGGTAACACTT 652
|| | | || | ||| ||| || | | ||||||| |||||||||| || || |
Sbjct 184 --TG--GATAGTA-T--CGT-GTTATC--AGC-GTGGTGTTTCTCTCAAGGGAAATACCT 232
Query 653 ACTGGTGTGCTATAAGAAGGAACTC---AAACGCTTTGCGTGTTGATCACATAATCTGTT 709
||| ||||||| || ||| ||| | |||| | | | ||||||||||||||||
Sbjct 233 ACTTTTGTGCTACAAAAAGTAACGCAATAAACAAAAT-C--GACGATCACATAATCTGTT 289
Query 710 TTGATTTTACAAGTGAGAGATTCGGTCCGCTTATGTATTTGCCGTTTATTAGAGATAGG- 768
||||||| |||||||||||||| || || ||| || | | ||| | |||| | | ||
Sbjct 290 TTGATTTCACAAGTGAGAGATTTGGGCCACTTTTGCGTCTACCG--T-TTAGCGCT-GGC 345
Query 769 TGTGCAAGCCT-TGTGACTCTATCTTGTGTTAGAGAAGAGAAGCTTGCGGTTTTATTTT- 826
|| | | || ||||||| |||||||||||||||||||||||||||||| |||| ||
Sbjct 346 CATG-ATGACTATGTGACTTTATCTTGTGTTAGAGAAGAGAAGCTTGCGGCTTTACTTAC 404
Query 827 GTT-A-CTA-TG-A-TAC-T--G--TT-GAGGTATGGATTACGACTAAGATTGAGGCCGA 875
| | | | || | | | | | || ||| ||||||| ||||||||||| ||| ||
Sbjct 405 GCACAACGACTGGAATCCATATGAGTTTGAGATATGGATCACGACTAAGATCGAGTATGA 464
Query 876 -AAAGATGTCGTGGAGCAAGTTCTTG-ACAGTGAA-A-ATGT--AT-GT-TGACCTTCTG 927
|||| |||||||||||||| ||||| | | || | | | | || | |||| | | |
Sbjct 465 TAAAG-TGTCGTGGAGCAAGATCTTGGAAA-TGGATACAGGACCATTGGCTGACATGCCG 522
Query 928 GATT-CACATGCAGCA-GGGAGTTTTTTCATTGACGAGCTGAAGAAAGT-TGCTATGATT 984
||| || || | || |||||||| |||||||||||| ||||||||| | | ||| ||
Sbjct 523 -ATTGCATATATA-CATGGGAGTTTCTTCATTGACGAGGAGAAGAAAGTCTCC-ATGGTT 579
Query 985 TTTGATAGACCGATGCATCA-TCGCGACACAGTTCACATCGTGGGAGAGGCTGGATACGT 1043
|||||| ||| | || | || | ||| | || | ||| | | ||||||| |
Sbjct 580 TTTGATC-ACC-A--CAG-AGTC---A-ACA-T-CA--T--TGGAAAAA-CTGGATATTT 623
Query 1044 TAAAGAAGTGGATCTAGGAGAACCTG-AT--GACA-AATACTTTTTCCCAC-TTGTGTGC 1098
|| |||| ||||||| ||| || || | | || || | | | |||| || |||||
Sbjct 624 TAGAGAATTGGATCTCCGAGTACATGTAGCCGGCATAA-AGTGTAGGCCACATT-TGTGC 681
Query 1099 TCTTATGTTCCAAGTTTAGTACAAATCAAGA-AACCTGCAGGAGGCCAAAGGAAACAACA 1157
|||| ||||||| || | | |||||||| | ||||| | |||||| ||||||||| | |
Sbjct 682 CCTTACGTTCCAAATTCAATGCAAATCAA-ACAACCTCCGGGAGGCAAAAGGAAACGA-A 739
Query 1158 AAGC-AGTT-TAGAAAAACGTCGATGTGATCAAAACATATCGAGA 1200
|| | | || ||||| | ||||||| ||| |||||||| | ||||
Sbjct 740 AACCCA-TTCTAGAACAGCGTCGATATGACCAAAACATGTTGAGA 783
> AT5G41500.1 | Symbols: | F-box and associated interaction domains-containing
protein | chr5:16604002-16605213 FORWARD LENGTH=1212
Length=1212
Score = 111 bits (60), Expect = 1e-23
Identities = 507/707 (72%), Gaps = 93/707 (13%)
Strand=Plus/Plus
Query 533 GGTATGAAATCTACGATTTTGACT-TTAATTTATGGACGACTCTTGACGTTACTCCACAC 591
|||||||||||||||||||||||| || ||||||||| |||||||| | ||||||||
Sbjct 536 GGTATGAAATCTACGATTTTGACTCTT-GTTTATGGACAACTCTTGATATCACTCCACAT 594
Query 592 TGGTGTTTAAATTATTGCCGTGGTTTTCGTAACTATGGTGTTACTCTCAAGGGTAACACT 651
||| | | | || | | ||| | | || | | ||| | || ||||| ||||||
Sbjct 595 TGG-G-GT--A-TA-T--CTTGG---AC-TTACCCTAGAGTTTCCCTTAAGGGAAACACT 642
Query 652 TACTGGTGTGCTATAAG-AAGGAACTCAAACGCTTTGCGTGTTGATCACATAATCTGTTT 710
|||||| ||||| || || |||| |||| | ||| | |||||||||||||||||
Sbjct 643 TACTGGCCTGCTA-GAGAAATGAACACAAAAGGTTT-C--CAAGATCACATAATCTGTTT 698
Query 711 TGATTTTACAAGTGAGAGATTCGGTCCGCTTATGTATTTGCCGTTTAT-TAGAGAT-A-G 767
||||||||||||||||||||| ||||||||| | | || | || ||| | | | |
Sbjct 699 TGATTTTACAAGTGAGAGATTTGGTCCGCTTCT--A----CC-TCTACCTAGGGCTCAAG 751
Query 768 G-TGTGCAAGCCTTGTGACTCTATCTTGTGTTAGAGAAGAGAAGCTTGCGGTTTTATTTT 826
| ||| || | |||| | |||||||||||| ||||||||||||||| |||||| ||
Sbjct 752 GATGT-CA----T-GTGAGTTTATCTTGTGTTAAAGAAGAGAAGCTTGCAGTTTTACTTA 805
Query 827 -GT------T--ACTATGATAC-T--G--T-TGAG---G---TATGGATTACGACTAAGA 865
| | || | ||| | | | | |||| | ||||||||||||||||||
Sbjct 806 AGCACCGGCTGCACCACGATTCATACGAATATGAGTTTGAGATATGGATTACGACTAAGA 865
Query 866 TTGAGGCCGAAAAGATGTCGTGGAGCAAGTTCTTGACAGTGAAAATGTATGTTGACCTTC 925
|||| | ||||| | ||||||||||||||||||||| | || | ||| | | ||||
Sbjct 866 TTGACGTCGAAATGGTGTCGTGGAGCAAGTTCTTGAGAATGGATATG-A-G---ACCTAA 920
Query 926 TGGATTCA-CATGCAGCAGGGAGTTTTTTCATTGACGA-GCTGAAGAAAGTTG-CTATGA 982
| || | | | || | ||||| | | ||||||| | |||||||||| | |||
Sbjct 921 -G-ATAAAGCTTCCA-CTT--AGTTTCTACGTTGACGAAGA-GAAGAAAGTTTTC-ATGG 973
Query 983 TTTTTGATAGACCGATGCATCATCGCGACACAGTTC--A-CATCGTGGGAGAGGCTGGAT 1039
||||||| | | | || ||| | | | ||| | |||| | |||||| ||||||
Sbjct 974 GTTTTGATC-ATGGG-GAAT-ATCCCAAGTTATTTCTTAACATCATTGGAGAGACTGGAT 1030
Query 1040 ACGTTAA-AGAAGTGGATCTAGGAGAACCTGATGACAAATACTTTTTCCCACTTGTGTGC 1098
| |||| | || ||||||| |||| || ||| | | | | || || | | | |
Sbjct 1031 TC-TTAAGAAAATTGGATCTCGGAGTACATGAAGGCCAC--CGTTCGCC-A-T-G----C 1080
Query 1099 TCTTATGTTCCAAGTTTAGTACAAATCAAGAAACCTGCAGGAGGCCAAAGGA-AACAACA 1157
||||||||||||||||| || ||||||||| | |||||||||| | ||| || || ||||
Sbjct 1081 TCTTATGTTCCAAGTTTGGTCCAAATCAAGCATCCTGCAGGAGACAAAATGATAA-AACA 1139
Query 1158 AAGCAGTTTAGAAAAACGTCGATGTGATCAAAACA-TATCGAGACTT 1203
||| ||||||||| | ||||||| || |||||||| | | |||||||
Sbjct 1140 AAGTAGTTTAGAAGACCGTCGATTTGCTCAAAACAGTTT-GAGACTT 1185
> AT5G36200.1 | Symbols: | F-box and associated interaction domains-containing
protein | chr5:14244106-14246296 REVERSE LENGTH=1416
Length=1416
Score = 104 bits (56), Expect = 2e-21
Identities = 92/109 (84%), Gaps = 4/109 (4%)
Strand=Plus/Plus
Query 1035 TGGATACGTTAAAGAAGTGGATCTAGGAGAACCTGA-TGACAAATACTT-TTTCCCACTT 1092
||||||| ||||| |||||||||| |||||| || | ||||||| || || |||||||
Sbjct 1074 TGGATACTTTAAACAAGTGGATCTTGGAGAATCT-ACAAACAAATA-TTGTTACCCACTT 1131
Query 1093 GTGTGCTCTTATGTTCCAAGTTTAGTACAAATCAAGAAACCTGCAGGAG 1141
|||||||||||||||||||||| ||| ||||||||| || || || |||
Sbjct 1132 GTGTGCTCTTATGTTCCAAGTTCAGTGCAAATCAAGCAAGCTACACGAG 1180
> AT5G36730.1 | Symbols: | F-box and associated interaction domains-containing
protein | chr5:14436317-14437549 FORWARD LENGTH=1233
Length=1233
Score = 100 bits (54), Expect = 3e-20
Identities = 98/118 (83%), Gaps = 7/118 (6%)
Strand=Plus/Plus
Query 1019 ACATCGTGGGAGAGGCTGGATACGTT-AAAGAAGTGGATCTAGGAGAACC-TGATGACA- 1075
||||| | ||| ||| || |||| || |||||||||||||| |||| || | | | |
Sbjct 1046 ACATCATTGGAAAGGATGAATAC-TTCAAAGAAGTGGATCTTGGAGTGCCAAGTTCATAT 1104
Query 1076 A-ATACTTTTT-CCCACTTGTGTGCTCTTATGTTCCAAGTTTAGTACAAATCAAGAAA 1131
| ||| ||||| ||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1105 ATATA-TTTTTCCCCACATGTGTGCTCTTATGTTCCAAGTTTAGTACAAATCAAGAAA 1161
> AT5G36820.1 | Symbols: | F-box and associated interaction domains-containing
protein | chr5:14495617-14496849 FORWARD LENGTH=1233
Length=1233
Score = 100 bits (54), Expect = 3e-20
Identities = 98/118 (83%), Gaps = 7/118 (6%)
Strand=Plus/Plus
Query 1019 ACATCGTGGGAGAGGCTGGATACGTT-AAAGAAGTGGATCTAGGAGAACC-TGATGACA- 1075
||||| | ||| ||| || |||| || |||||||||||||| |||| || | | | |
Sbjct 1046 ACATCATTGGAAAGGATGAATAC-TTCAAAGAAGTGGATCTTGGAGTGCCAAGTTCATAT 1104
Query 1076 A-ATACTTTTT-CCCACTTGTGTGCTCTTATGTTCCAAGTTTAGTACAAATCAAGAAA 1131
| ||| ||||| ||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1105 ATATA-TTTTTCCCCACATGTGTGCTCTTATGTTCCAAGTTTAGTACAAATCAAGAAA 1161
> AT5G41510.1 | Symbols: | F-box and associated interaction domains-containing
protein | chr5:16607124-16608326 FORWARD LENGTH=1203
Length=1203
Score = 93.5 bits (50), Expect = 4e-18
Identities = 95/116 (82%), Gaps = 5/116 (4%)
Strand=Plus/Plus
Query 309 TCAAGTCTTTCACTGCGAGGGTTTGTTACTATGCGTCATCAAAGA-CGATAAGGGTAGTC 367
||||||||| |||| ||||||||||| ||||| | || ||||| | | | |||
Sbjct 297 TCAAGTCTTACACTATGAGGGTTTGTTGTTATGCATTATGAAAGATC-CT-A--CTAGGA 352
Query 368 TTGTTGTTTGGAATCCGTATTTGGGACAAACAAGGTGGATCGAACCCAGATATTTT 423
|||| |||||||||||||||||||||||||||||||||||| ||| ||| ||||||
Sbjct 353 TTGTGGTTTGGAATCCGTATTTGGGACAAACAAGGTGGATCCAACTCAGGTATTTT 408
> AT3G24580.1 | Symbols: | F-box and associated interaction domains-containing
protein | chr3:8969162-8970298 FORWARD LENGTH=1137
Length=1137
Score = 73.1 bits (39), Expect = 6e-12
Identities = 95/120 (79%), Gaps = 12/120 (10%)
Strand=Plus/Plus
Query 1005 TCGCGACACAG-TTCACATCGTGGGAGAGGCTGGATACGT-TAAAGAAGTGGATCTAGGA 1062
|||| ||| || || ||||||| |||| || |||| || | || ||||||| || |||
Sbjct 1014 TCGCAACAAAGCTT-ACATCGTTGGAGTGGATGGA-ACCTGGGAACAAGTGGACCTTGGA 1071
Query 1063 GA-ACCTGAT-GACAAATACTT-TTT-CCCACTTGTGTGCTCTTATGTTCCAAGTTTAGT 1118
| ||| | ||||||| || ||| |||||||||||||||||||||||||||||||||
Sbjct 1072 -ATGTCTG-TAGACAAAT--TTGTTTACCCACTTGTGTGCTCTTATGTTCCAAGTTTAGT 1127
> AT4G09790.1 | Symbols: | pseudogene of the F-box family protein
| chr4:6163414-6164655 REVERSE LENGTH=1242
Length=1242
Score = 54.7 bits (29), Expect = 2e-06
Identities = 29/29 (100%), Gaps = 0/29 (0%)
Strand=Plus/Plus
Query 703 ATCTGTTTTGATTTTACAAGTGAGAGATT 731
|||||||||||||||||||||||||||||
Sbjct 722 ATCTGTTTTGATTTTACAAGTGAGAGATT 750
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 60742659450
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5