BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg479775 Length=604 Score E Sequences producing significant alignments: (Bits) Value AT3G22560.1 | Symbols: | Acyl-CoA N-acyltransferases (NAT) sup... 859 0.0 > AT3G22560.1 | Symbols: | Acyl-CoA N-acyltransferases (NAT) superfamily protein | chr3:7998857-7999533 REVERSE LENGTH=677 Length=677 Score = 859 bits (465), Expect = 0.0 Identities = 559/605 (92%), Gaps = 3/605 (0%) Strand=Plus/Plus Query 1 TAAAAATAACAAAATTTTGCAAAACCAATGGATTCACCTATAATCTTTCTCCGGCCGTTC 60 ||||| |||||||||||| || | | ||||| ||||| | |||||| |||||||||||| Sbjct 72 TAAAACTAACAAAATTTTACATGATC-ATGGAATCACCAAGAATCTTCCTCCGGCCGTTC 130 Query 61 AATCTCTCCGATGCAGAAGACGTCCTCAAATGGGCCGGTGACGATGACGTGACACGTTAC 120 |||||||||||||||||||||||| | ||||||||||||||||||||||| ||||||||| Sbjct 131 AATCTCTCCGATGCAGAAGACGTCTTTAAATGGGCCGGTGACGATGACGTCACACGTTAC 190 Query 121 CTCCGTTGGGACTCCGTTAAAACCTTAGAAGAAGCCAAACAACACATCTTAAACAAGGCT 180 |||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||| Sbjct 191 CTCCGTTGGGACTCCGTTAACTCCTTAGAAGAAGCTAAACAACACATCTTAAACAAGGCT 250 Query 181 ATACCACACCCATGGCGCCGTTCCATCTCTCTCGTCCAACACGGTCGTTCG-TTAGGTTA 239 ||||||||||||||||||||||||||||||||| ||||| |||||| |||| || ||||| Sbjct 251 ATACCACACCCATGGCGCCGTTCCATCTCTCTCCTCCAAGACGGTCATTCGATT-GGTTA 309 Query 240 CGTCTCCGTCAATCCAGATTCAGGTGATGGTCGGTGCCGAGCCGACCTTGCATACGCTAT 299 ||| |||||||| ||||| || |||||||||||||||||||||||||| ||||||||| | Sbjct 310 CGTATCCGTCAAGCCAGACTCCGGTGATGGTCGGTGCCGAGCCGACCTCGCATACGCTGT 369 Query 300 AGCTAAAGAGTTTTGGGGGCGAGGGATAGCCACGGCGGCGGTGAGGATGGCGGTGGAACA 359 |||||||||||||||||||| ||||||||||| |||||||||||||||||||| ||||| Sbjct 370 CGCTAAAGAGTTTTGGGGGCGGGGGATAGCCACAGCGGCGGTGAGGATGGCGGTTGAACA 429 Query 360 AGCTTTCGAGGATTTTCCGGAGTTGGTGAGGCTACAAGCGGTGGTGGAGGTGGAGAACAA 419 |||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 430 AGCTTTGGAGGATTTTCCGGAGGTGGTGAGGCTACAAGCGGTGGTGGAGGTGGAGAACAA 489 Query 420 AGCGTCTCAGAGGGTGTTGGAGAAAGCTGGATTTCGAAAAGAGGGTTTGCTTGAGAAGTA 479 |||||| || ||||| |||||||||||||||||||||||||||||||| ||||||||||| Sbjct 490 AGCGTCCCAAAGGGTTTTGGAGAAAGCTGGATTTCGAAAAGAGGGTTTACTTGAGAAGTA 549 Query 480 TGGTTTTAGCAAAGGAGTGATCAAAGACATGTTTCTCTATAGTTTTGTTAAAGATGATTG 539 |||||||||||||||||| |||| |||||||||||||||||||| |||||||||||||| Sbjct 550 TGGTTTTAGCAAAGGAGTCATCAGAGACATGTTTCTCTATAGTTACGTTAAAGATGATTG 609 Query 540 TTTTGTGTAATAATTAACGGTAGAAATAATGGAGGAAGTAAGTAAATAATATCCGGTTTT 599 |||||||| ||| ||||||||| ||||||||||| |||||| |||||||||||||||||| Sbjct 610 TTTTGTGTGATAGTTAACGGTAAAAATAATGGAGAAAGTAACTAAATAATATCCGGTTTT 669 Query 600 TACCG 604 ||||| Sbjct 670 TACCG 674 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 29085571113 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5