BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg479789
Length=2378
Score E
Sequences producing significant alignments: (Bits) Value
AT3G22780.1 | Symbols: TSO1, ATTSO1 | Tesmin/TSO1-like CXC doma... 1823 0.0
AT3G22760.1 | Symbols: SOL1 | Tesmin/TSO1-like CXC domain-conta... 540 3e-152
AT4G14770.1 | Symbols: TCX2, ATTCX2 | TESMIN/TSO1-like CXC 2 | ... 501 1e-140
> AT3G22780.1 | Symbols: TSO1, ATTSO1 | Tesmin/TSO1-like CXC domain-containing
protein | chr3:8048802-8052260 FORWARD LENGTH=2415
Length=2415
Score = 1823 bits (987), Expect = 0.0
Identities = 1179/1270 (93%), Gaps = 20/1270 (2%)
Strand=Plus/Plus
Query 1 ACACTGTTTCGCACCGGCGCGGACAAAGttttttttttttttttttCGAAATCCAACAAC 60
|||||||||||||||||||||||||||| |||||||||| |||||||||| |||||
Sbjct 1 ACACTGTTTCGCACCGGCGCGGACAAAG-----TTTTTTTTTTGTTCGAAATCCGACAAC 55
Query 61 AACCCTAGATTGa-aaa-aaacaaaaaaCAGTGTCTGCATAGAGGCAATGTAGATTTGAT 118
||||||||||| | ||| ||| | ||| ||||||||||||||||||||||||||| ||||
Sbjct 56 AACCCTAGATT-ATAAACAAA-ATAAACCAGTGTCTGCATAGAGGCAATGTAGATGTGAT 113
Query 119 TTTTGCTGGAAAATGGACAAA-CCTCAGAAGAATCCTACTTCCCAGATCGGAACTTCAAC 177
||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||
Sbjct 114 TTTTGCTGGAAAATGGACAAATCC-CAGAAGAATCCTACTTCCCAGATCGGAACTTCAAC 172
Query 178 TCCCAAATCCAAATTCGAGGATTCTCCAGTGTTCAACTACATAAGCAATCTCTCTCCAAT 237
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 173 TCCCAAATCCAAATTCGAGGATTCTCCAGTGTTCAACTACATAAGCAACCTCTCTCCAAT 232
Query 238 TGAGTCTGTCAAATCTATCTCCACTGCTCAAACGTTTAGCTCTCTGAGTTTCACATCTCC 297
|||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 233 TGAGTCGGTCAAATCTATCTCCACTGCTCAAACGTTTAGCTCTCTTAGTTTCACATCTCC 292
Query 298 TCCTCCTGT-TTTCACTTCTCCTCACGTCAATTCTCATAGAGAATCCAGATTTTTCAGAT 356
||||||||| ||| |||||||||||||||| |||||| |||||||||||||| |||||||
Sbjct 293 TCCTCCTGTGTTT-ACTTCTCCTCACGTCATTTCTCACAGAGAATCCAGATTCTTCAGAT 351
Query 357 GTCATAACTCTGTTGATCGTGCAAAGCACTTAGAGTCTTTAGATGGATCTGCTATTAAAG 416
|||||||||||||||||||| ||||||||||||| |||||||||||||||||| ||||||
Sbjct 352 GTCATAACTCTGTTGATCGTTCAAAGCACTTAGAATCTTTAGATGGATCTGCTGTTAAAG 411
Query 417 AAGAAGTTGTAGTACCAGTTA-TTGAAGATCTAAACAAAGAAGCTTCTTTGGAAGATGAA 475
|||||||||||||||| ||| ||||||||||||| ||||||||||||||||||||||||
Sbjct 412 GAGAAGTTGTAGTACCA-TTAGTTGAAGATCTAAATAAAGAAGCTTCTTTGGAAGATGAA 470
Query 476 GAAGAAACTTCCATTGAAACGTCTTATGAGCTGCCACAGATCTTGAAGTTTGGCAGCCAA 535
||||||||||| |||||||||||| |||||||||||||||| ||||||| | ||||||
Sbjct 471 GAAGAAACTTCTGTTGAAACGTCTTCTGAGCTGCCACAGATCATGAAGTTCGATAGCCAA 530
Query 536 ACTCCTGAGGATAGTGATTCACCTTGCACTGAAGATGTTGTTATTGAAGCTTCATCTGAT 595
||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 531 ACTTCTGAGCATAGTGATTCACCTTGCACTGAAGATGTTGTTATTGAAGCTTCATCTGAT 590
Query 596 CCTCCTCGAGGAGACGGTGGTTCGTCTTCCGAGGATGTTAAGATGGGGCTTCAGAAGATG 655
||||||||||||||| ||||||||| ||||||||||| | |||||| |||||||| |||
Sbjct 591 CCTCCTCGAGGAGACAATGGTTCGTCATCCGAGGATGTCACGATGGGACTTCAGAATATG 650
Query 656 CTTGTTGTTCGGGAAGAGAAAGACACTCCTGATTGTGGACGTTTGATCTCAGATGCTACT 715
|||||||||||||||| ||| |||||||||| |||||||||||||||||||||||| |||
Sbjct 651 CTTGTTGTTCGGGAAGGGAATGACACTCCTGGTTGTGGACGTTTGATCTCAGATGCAACT 710
Query 716 GAGCTGTTAGTATTTAGATCTCCGAATGATTCAGAGGCTTTTAGATGTTTGGTGGATAAA 775
||||||||||||||| |||||||||||||||| |||||||||||||| ||||| ||||||
Sbjct 711 GAGCTGTTAGTATTTCGATCTCCGAATGATTCTGAGGCTTTTAGATGCTTGGTCGATAAA 770
Query 776 ATATCGAGCTCGGAAAGACGGTTCTGCGCTGGTGTCAAGTCAACAAAGCGGCCTAAAATC 835
||||| ||||| |||||||||||||| |||||||||||||| |||||||||||| | |||
Sbjct 771 ATATCAAGCTCAGAAAGACGGTTCTGTGCTGGTGTCAAGTCTACAAAGCGGCCTGATATC 830
Query 836 A-CTGAAGATGTTCCAGCCAATGGATCCAGTAATGAAAATGAGCCTTTAACTGTGCTTCC 894
| | ||||| |||||||||||||||| |||||||||||| ||||||| ||||||||||
Sbjct 831 AACA-AAGATATTCCAGCCAATGGATCTAGTAATGAAAATCAGCCTTTGGCTGTGCTTCC 889
Query 895 --CAA-CGAGTCTGTCTTTAACTTGCATCGTGGTGGCATGCGAAGACGCTGCCTTGACTT 951
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 890 TACAAACGAGTCTGTCTTTAACTTGCATCGTGGTGGCATGCGAAGACGCTGCCTTGACTT 949
Query 952 TGAGATGCCAGGGAAGCGGAAGAAAGATATAGCTGATGATCATCAATCTGTGTGTGACAA 1011
||||||||||||||| |||||||| ||||| | ||||||||| |||||||||||||||||
Sbjct 950 TGAGATGCCAGGGAAACGGAAGAAGGATATTGTTGATGATCAGCAATCTGTGTGTGACAA 1009
Query 1012 TAATGTGGCTGGTGAATCTTCCTCGAGATGTGTTGTACCTGGTATTGGTCTTCATCTAAA 1071
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1010 TAATGTGGCTGGTGAATCTTCCTCGAGCTGTGTTGTACCTGGTATTGGTCTTCATCTAAA 1069
Query 1072 CGCCGTTGCAATGTCTGCAAAGGACATTAACATTAATCTCATACATGACTATTCCATATC 1131
|||||||||||||||||||||||||| |||||| | | ||||||||| ||||||||||||
Sbjct 1070 CGCCGTTGCAATGTCTGCAAAGGACAGTAACATCAGTGTCATACATGGCTATTCCATATC 1129
Query 1132 TGGGGAGATTCAAAAGAGTTTCTCAGGCTCTATTACTCCAATTCACTCCCAAGACACTGT 1191
||| |||||||||||||||||||||||||||| ||||||||||| ||||||||||||||
Sbjct 1130 TGGAGAGATTCAAAAGAGTTTCTCAGGCTCTACCACTCCAATTCAGTCCCAAGACACTGT 1189
Query 1192 GCAAGAAACTTCGGACCAGGCAGAAAATGAACCTGTAGAAGAAATTCCCAAAGCATTGGC 1251
||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||
Sbjct 1190 GCAAGAAACTTCGGACCAGGCAGAAAACGAACCTGTAGAAGAAGTTCCCAAAGCATTGGT 1249
Query 1252 ATTCCCAGAG 1261
|||||||||
Sbjct 1250 GTTCCCAGAG 1259
Score = 1783 bits (965), Expect = 0.0
Identities = 1078/1131 (95%), Gaps = 13/1131 (1%)
Strand=Plus/Plus
Query 1258 AGA-GCGTAAATCTGAACAAGCTGGAGAGGGTGAGTCATGTAAGCGATGCAACTGCAAAA 1316
||| ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||
Sbjct 1285 AGATGCGTAAATCTGAACAAGCTGGGGAGGGTGAGTCATGTAAACGATGCAACTGCAAAA 1344
Query 1317 AGTCAAAGTGTTTGAAGCTTTACTGTGAATGCTTTGCTGCTGGGGTTTATTGCATAGAGC 1376
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1345 AGTCTAAGTGTTTGAAGCTTTACTGTGAATGCTTTGCTGCTGGGGTTTATTGCATAGAGC 1404
Query 1377 CATGTTCATGTATAGATTGCTTCAACAAACCTATCCATGAAGAAACTGTTTTGGCTACCC 1436
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1405 CATGTTCATGTATAGATTGCTTCAACAAACCTATCCATGAAGAAACTGTTTTGGCTACCC 1464
Query 1437 GCAAACAGATTGAATCCCGAAATCCACTTGCATTTGCTCCTAAAGTCATCAGAAGCGCAG 1496
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1465 GCAAACAGATTGAATCCCGAAATCCACTTGCATTTGCTCCTAAAGTCATCAGAAATGCAG 1524
Query 1497 ATTCCGTCATGGAAGCTGGTGATGATGCAAGTAAAACCCCAGCTTCTGCACGACACAAAC 1556
||||| ||||||||||| |||||||||| ||||||||||| |||||||||||||||||||
Sbjct 1525 ATTCCATCATGGAAGCTAGTGATGATGCCAGTAAAACCCCGGCTTCTGCACGACACAAAC 1584
Query 1557 GCGGCTGCAACTGCAAGAAATCAAACTGTCTGAAGAAATACTGTGAATGCTATCAGGGTG 1616
| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1585 GTGGCTGCAACTGCAAGAAATCAAACTGTATGAAGAAATACTGTGAATGCTATCAGGGTG 1644
Query 1617 GAGTCGGCTGTTCCATGAACTGTAGATGTGAAGGATGC-CAAAATGTATTCGGCAGAAAA 1675
|||||||||||||||||||||||||||| ||||||||| |||| ||||||||||||||||
Sbjct 1645 GAGTCGGCTGTTCCATGAACTGTAGATGCGAAGGATGCACAAA-TGTATTCGGCAGAAAA 1703
Query 1676 GAAGGGTCTTTACTTGTTATCATGGAGAGCAAACTAGAGGAGGATCAGGAGACATATGAG 1735
|| ||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||
Sbjct 1704 GATGGGTCTTTACTTGTTATCATGGAAAGCAAACTAGAGGAGAATCAGGAGACATATGAG 1763
Query 1736 AAAAGAATAGCAAAAATTCAACACAACATTGAAGTGTCGAAAGAAGTGGAGCAGAACCCA 1795
||||||||||||||||| ||||||||| | || |||||||||||||||||||||||||||
Sbjct 1764 AAAAGAATAGCAAAAATCCAACACAACGTCGAGGTGTCGAAAGAAGTGGAGCAGAACCCA 1823
Query 1796 AGTTCTGATCAACCTTCGACACCACTGCCACCGTACAGACATTTGGTGGTTCATCAGCCA 1855
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1824 AGTTCTGATCAACCTTCGACACCACTGCCACCGTACAGACATTTGGTGGTTCATCAGCCA 1883
Query 1856 TTCTTGTCTAAGAACAGACTGCCTCCGACGCAGTTTTTTCTTGGCACGGGTTCTTCCTCT 1915
||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||
Sbjct 1884 TTCTTGTCTAAGAACAGACTGCCTCCGACACAGTTTTTTCTTGGCACAGGTTCTTCCTCT 1943
Query 1916 TTCAGAAAACCAGATAGTGGTTTGACACAATCACAGAATGAGAAGAAGCCTCTTGAAACT 1975
|||||||||||| | |||| |||| | |||||||||||||||||||||||||||||||||
Sbjct 1944 TTCAGAAAACCAAACAGTGATTTGGCGCAATCACAGAATGAGAAGAAGCCTCTTGAAACT 2003
Query 1976 GTGGCTGAAGACAAAACAGAGATTATGCCTGAGATTCTCCTCAATTCCCCTATAGCTAAC 2035
||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2004 GTGACTGAGGACAAAACAGAGATTATGCCTGAGATTCTCCTCAATTCCCCTATAGCTAAC 2063
Query 2036 ATCAAGGCCATCTCCCCCAACAGCAAGAGAGTCTCTCCCCCTCAACCCGGCTCCTCAGAA 2095
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 2064 ATCAAGGCCATCTCTCCCAACAGCAAGAGAGTCTCTCCCCCTCAACCCGGCTCCTCGGAG 2123
Query 2096 TCGGGCTCAATCCTAAGGAGGAGAGGTAATGGCCGGAAGCTGATACTACGGTCTATTCCA 2155
|| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 2124 TCAGGCTCAATCCTAAGGAGAAGAGGTAATGGCCGGAAGCTGATACTACGGTCTATTCCA 2183
Query 2156 GCATTTCCTTCTCTCAACCCAAATCAGTGAATCAAAAACAATATGGTTAAGCTATGGAAA 2215
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 2184 GCATTTCCTTCTCTCAACCCAAATCAGTGAATCAAAAACAATTTGGTTAAGCTATGGAAA 2243
Query 2216 AATTCTT-GTATCTTTGTAATGTTCCAGATCCTGTTAGCCTATCACTGTTTCCATAACAT 2274
||||||| ||||||||||||||||||||||||| ||||||||||| ||||||||||||||
Sbjct 2244 AATTCTTTGTATCTTTGTAATGTTCCAGATCCTATTAGCCTATCATTGTTTCCATAACAT 2303
Query 2275 AAGGCATAAGCAACGTTCTTGTAAGATACTTTCATTCTAGTAG--GTAA-TA-T--AATA 2328
||||||||||||||||| |||||||||||||| |||||||||| ||| || | ||||
Sbjct 2304 AAGGCATAAGCAACGTTATTGTAAGATACTTT-ATTCTAGTAGTAGTAGGTAATGTAATA 2362
Query 2329 -TCACATTCTAGTTCATAATCTTCCAGAAAGAACATCCAAAACTGGACTTT 2378
| ||||||||||||||||||||||||||||||| ||| ||||||||||||
Sbjct 2363 GT-ACATTCTAGTTCATAATCTTCCAGAAAGAACGTCCTAAACTGGACTTT 2412
> AT3G22760.1 | Symbols: SOL1 | Tesmin/TSO1-like CXC domain-containing
protein | chr3:8044455-8047530 FORWARD LENGTH=2146
Length=2146
Score = 540 bits (292), Expect = 3e-152
Identities = 384/429 (90%), Gaps = 3/429 (1%)
Strand=Plus/Plus
Query 1261 GCGTAAATCTGAACAAGCTGGAGAGGGTGA---GTCATGTAAGCGATGCAACTGCAAAAA 1317
|||||| || |||||| | ||||| || || ||||||||| || ||||||||||||||
Sbjct 1109 GCGTAAGTCCGAACAATCAGGAGAAGGCGACTCGTCATGTAAACGGTGCAACTGCAAAAA 1168
Query 1318 GTCAAAGTGTTTGAAGCTTTACTGTGAATGCTTTGCTGCTGGGGTTTATTGCATAGAGCC 1377
|| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 1169 ATCCAAGTGTTTGAAGCTTTACTGTGAATGCTTTGCTGCTGGATTTTATTGCATAGAGCC 1228
Query 1378 ATGTTCATGTATAGATTGCTTCAACAAACCTATCCATGAAGAAACTGTTTTGGCTACCCG 1437
||||||||||||| ||||||||||||||||||||||| |||| ||| ||||||| ||
Sbjct 1229 ATGTTCATGTATAAATTGCTTCAACAAACCTATCCATAAAGATGTTGTCCTGGCTACTCG 1288
Query 1438 CAAACAGATTGAATCCCGAAATCCACTTGCATTTGCTCCTAAAGTCATCAGAAGCGCAGA 1497
|||||||||||||||||| |||||||||||||||||||||||||||||||||| | ||||
Sbjct 1289 CAAACAGATTGAATCCCGCAATCCACTTGCATTTGCTCCTAAAGTCATCAGAAACTCAGA 1348
Query 1498 TTCCGTCATGGAAGCTGGTGATGATGCAAGTAAAACCCCAGCTTCTGCACGACACAAACG 1557
|||| |||| |||| |||||| |||||||||||||| |||||||| || |||||||||||
Sbjct 1349 TTCCATCATTGAAGTTGGTGAGGATGCAAGTAAAACTCCAGCTTCAGCGCGACACAAACG 1408
Query 1558 CGGCTGCAACTGCAAGAAATCAAACTGTCTGAAGAAATACTGTGAATGCTATCAGGGTGG 1617
||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1409 AGGCTGTAACTGCAAGAAATCAAACTGTCTGAAGAAATACTGTGAATGCTATCAGGGCGG 1468
Query 1618 AGTCGGCTGTTCCATGAACTGTAGATGTGAAGGATGCCAAAATGTATTCGGCAGAAAAGA 1677
||| || ||||| || |||||||||||||||||||| |||||| ||| |||||||||||
Sbjct 1469 AGTTGGTTGTTCTATAAACTGTAGATGTGAAGGATGTAAAAATGCATTTGGCAGAAAAGA 1528
Query 1678 AGGGTCTTT 1686
||||||||
Sbjct 1529 TGGGTCTTT 1537
> AT4G14770.1 | Symbols: TCX2, ATTCX2 | TESMIN/TSO1-like CXC 2
| chr4:8481370-8484825 REVERSE LENGTH=2177
Length=2177
Score = 501 bits (271), Expect = 1e-140
Identities = 731/941 (78%), Gaps = 79/941 (8%)
Strand=Plus/Plus
Query 1278 CTGGAGAGGGTGAGTCATGTAAGCGATGCAACTGCAAAAAGTCAAAGTGTTTGAAGCTTT 1337
||||||| || ||||| |||||||||||||||||||||||||| ||||||||||| ||||
Sbjct 1103 CTGGAGAAGGCGAGTCGTGTAAGCGATGCAACTGCAAAAAGTCCAAGTGTTTGAAACTTT 1162
Query 1338 ACTGTGAATGCTTTGCTGCTGGGGTTTATTGCATAGAGCCATGTTCATGTATAGATTGCT 1397
|||||||||||||||||||||| || ||||||||||||||||||||||||||||| ||||
Sbjct 1163 ACTGTGAATGCTTTGCTGCTGGAGTCTATTGCATAGAGCCATGTTCATGTATAGACTGCT 1222
Query 1398 TCAACAAACCTATCCATGAAGAAACTGTTTTGGCTACCCGCAAACAGATTGAATCCCGAA 1457
|||| ||||||||||||||||| ||| |||| || ||||||||||||||||| || |
Sbjct 1223 TCAATAAACCTATCCATGAAGACGTTGTCCTGGCGACTCGCAAACAGATTGAATCTCGGA 1282
Query 1458 ATCCACTTGCATTTGCTCCTAAAGTCATCA-GAAGCGCAGATTCCG-TCATGGAAGCTGG 1515
|||||||||||||||||||||||||||| | ||| | | || || | ||| ||| | ||
Sbjct 1283 ATCCACTTGCATTTGCTCCTAAAGTCATTAGGAA-CTCTGACTCAGTTCA-AGAAACCGG 1340
Query 1516 TGATGATGCAAGTAAAACCCCAGCTTCTGCACGACACAAACGCGGCTGCAACTGCAAGAA 1575
||||||||||| ||||| ||||||||||| || || ||||| |||||||||||||||||
Sbjct 1341 GGATGATGCAAGCAAAACTCCAGCTTCTGCGCGCCATAAACGTGGCTGCAACTGCAAGAA 1400
Query 1576 ATCAAACTGTCTGAAGAAATACTGTGAATGCTATCAGGGTGGAGTCGGCTGTTCCATGAA 1635
|||||||||||||||||||||||||||||||||||||||||| || ||||||||||| ||
Sbjct 1401 ATCAAACTGTCTGAAGAAATACTGTGAATGCTATCAGGGTGGTGTGGGCTGTTCCATAAA 1460
Query 1636 CTGTAGATGTGAAGGATGCCAA-AATGTATTCGGCAGAAAAGAAGGGTCTTT-ACTTGTT 1693
|||||||||||||||||| || || | ||||||| | ||||| ||||||| | |||
Sbjct 1461 CTGTAGATGTGAAGGATGT-AAGAACGCATTCGGCCGGAAAGATGGGTCTTCCA-TTG-- 1516
Query 1694 ATCATGGAGAGCA-AACTAGAGGAGGATCAGGAGACATATGAGAAAAG-A-AT-AGCAAA 1749
| |||||| ||| ||| ||| ||||| | || |||| ||||||||| | | ||| ||
Sbjct 1517 A-CATGGA-AGCCGAACAAGAAGAGGAAAATGAAACATCTGAGAAAAGCAGAACAGCCAA 1574
Query 1750 AATTCAACACAACATTGAAGTGTCGAAAGAAGTGGAGCAGAACCCAAGTTCTGATCAACC 1809
|| ||||| |||| ||| || | || || | || || | ||||||| || |||
Sbjct 1575 AAGCCAACAAAACACTGAGGTTTT-AATGA-GAA-AG--GA-CATGAGTTCTGCTCTACC 1628
Query 1810 TTCGACACCA-CTGCC-ACCGTACAGAC-ATTTGGTGGTTCATC-AGCCATTCT--TG-T 1862
| |||||||| | ||| | ||||||| | ||||||| | | || |||| | |
Sbjct 1629 TACGACACCAAC-GCCGATT-TACAGACCAGAAC-TGGTTCAACTA-CCTTTCTCATCAT 1684
Query 1863 CTAAGAACAG-ACTGCCTCCGACGCAGTTTTTTCTTGGCACG-GGTTCTTCCTC-----T 1915
|||||||||| | ||||||| | |||| | ||||||| | | || |||||||| |
Sbjct 1685 CTAAGAACAGGA-TGCCTCCTCCACAGTCTCTTCTTGG-AGGTGGATCTTCCTCAGGGAT 1742
Query 1916 -TT---CAG--AA-A---A------CCAGATAGTGGTTTGACACAATCACAGAATGAGAA 1959
|| ||| || | | ||||| | | ||||| | ||||| |||||| ||
Sbjct 1743 ATTTAACAGTCAATATCTAAGAAAACCAGACATTAGTTTGTCTCAATC-CAGAATC-GA- 1799
Query 1960 GAAGCCTCTT-GAAACTGTGGCTGAAGACAAAACAGAGATTA-TGCCTGAGATTCTCCTC 2017
|||| | || || || || || | || | | || | | |||||||||||||| ||
Sbjct 1800 GAAGTCA-TTCGAGACAGTCGCAGTTGATGGAGCTGA-ACAAATGCCTGAGATTCTCATC 1857
Query 2018 AATTCCCCTATAGCTAACATCAAG-GCCATCTCCCCCAACAGCAAGAGAGTCTCTCCCCC 2076
||||||||||| ||||||||||| | |||| |||||| | ||||| |||||||| ||
Sbjct 1858 CATTCCCCTATACCTAACATCAAGAGTG-TCTCTCCCAACGGAAAGAGGGTCTCTCCTCC 1916
Query 2077 TCA-ACCCGGC-TCCTC-AGAATCGGGCTCAATCCTAAGGAGGAGAGGTAATGGC---CG 2130
||| | || || || || || ||||||||| || |||| ||| |||||| ||
Sbjct 1917 TCATAT--GGAATCATCTAGC-TCAGGCTCAATCTTAGGGAGAAGA---AATGGCGGGCG 1970
Query 2131 GAAGCTGATACTACGGTCTATTCCAGCATTTCCTTCTCTCA 2171
||| |||||| | | ||| |||||| | |||||||||||||
Sbjct 1971 GAAACTGATATTGCAGTCGATTCCATCGTTTCCTTCTCTCA 2011
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 118071681840
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5