BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg479805
Length=1857
Score E
Sequences producing significant alignments: (Bits) Value
AT3G22968.1 | Symbols: CPuORF59 | conserved peptide upstream op... 2122 0.0
AT3G22970.1 | Symbols: | Protein of unknown function (DUF506) ... 2122 0.0
> AT3G22968.1 | Symbols: CPuORF59 | conserved peptide upstream
open reading frame 59 | chr3:8152038-8154149 FORWARD LENGTH=1935
Length=1935
Score = 2122 bits (1149), Expect = 0.0
Identities = 1677/1902 (88%), Gaps = 155/1902 (8%)
Strand=Plus/Plus
Query 1 AAATAAACAAATTATCACAAAAATACG-TTTCTTGTATAATAAttttttttCCTCTCTAG 59
|||| |||||||||||||||||||||| ||||||||||||||| |||| |||||||
Sbjct 30 AAATTAACAAATTATCACAAAAATACGTTTTCTTGTATAATAA----TTTT--TCTCTAG 83
Query 60 ATTTGTCGCTTACCTTTTGAACTTCTCCGGCGATGAATCTCGCCGGGAAAATGAATATTC 119
||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||
Sbjct 84 ATTTGTCGCTTACCTTTTGAAATTCTCCGGCGATGAATCTCGCCGGGAAAAGGAATATTC 143
Query 120 CGGTTACTATTTCTGTTTCCGTTACTAGTAACGCTGTCGACTCTTACCATCGCCGTCACG 179
|||||| |||||||||||||||||| | | || |||||||||||||||||||| |
Sbjct 144 CGGTTATTATTTCTGTTTCCGTTAC---T-A----GT-GACTCTTACCATCGCCGTCATG 194
Query 180 TCTTCCGTGaa-a---aaaaaCTCTG----ATCCTTCTCTTAGA------------Cttt 219
||||||||||| | || ||| ||||||||| |||| ||||
Sbjct 195 TCTTCCGTGAACATCGTCGGAC-CTGAAAAATCCTTCTCCTAGACTTTTTTTTTTTCTTT 253
Query 220 -tt-t-ttt-t-ttATTATTCTTTGCTTCGTTTTTGT---GAAGATGATCCGCTGATTTT 271
|| | ||| | ||||||||||||||||||||||||| |||||||||||||||| |||
Sbjct 254 CTTCTCTTTGTATTATTATTCTTTGCTTCGTTTTTGTGAAGAAGATGATCCGCTGA-TTT 312
Query 272 CAGAAg--tt-ttcttctggtttttagctgagagg-ttttgttagattctgtttcttctt 327
|||||| || ||||||||| |||||||||||||| ||||| ||||||||| | ||
Sbjct 313 CAGAAGTTTTCTTCTTCTGGATTTTAGCTGAGAGGTTTTTGGTAGATTCTG-----T-TT 366
Query 328 cttcttcttcttcttctctggtttttgaatccaattttggaaatttttgaagagtttctt 387
|||||||||| | ||| ||||||| ||||||| |||||| |||||||||||| ||| ||
Sbjct 367 CTTCTTCTTC--C-TCTGTGGTTTTCGAATCCAGTTTTGG-AATTTTTGAAGATTTTGTT 422
Query 388 tcgtttttgttgGAGAGATCTGAG--A-TT-----------AGTGTATATGAAATCAAAT 433
| |||| ||||| ||||||||||| | || |||||||||||||||||||
Sbjct 423 TAGTTTCTGTTGAAGAGATCTGAGATATTTGAACGAAGCAGAGTGTATATGAAATCAAAT 482
Query 434 CTGTG--------TTTGAATTTGAATTGACTTGGGGACTTGTGAAGAGAAGTTAGA---- 481
||||| ||||||||||||||||||| ||||||||| ||||||||||||
Sbjct 483 CTGTGAAAATTTCTTTGAATTTGAATTGACTT-TGGACTTGTG-AGAGAAGTTAGATCTT 540
Query 482 -----TCGAGAGCTATGCCATTTACGATGAAGATCCAACCGATTGATATCGATTCTTCTC 536
||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 541 CTTCTTCGTGAGCTATGCCATTTACGATGAAGATCCAACCGATTGATATCGATTCTTCAC 600
Query 537 CAGCTGTAGCTAGAGCTGAATCAGGCAACAAACCGGTGCTCAAATCTCGTCTCAAACGTT 596
|| | |||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 601 CAACCGTAGCTAGAGCTGAATCAGGAAACAAACCGGTGCTCAAATCTCGTCTCAAACGTT 660
Query 597 TGTTTGATCGTCCG-TT-C--AC-----GAGAAACGCAAC-A--ACAACCACAGAGAAAC 644
|||||||||| ||| || | || ||||||| |||| | |||||||| |||||||
Sbjct 661 TGTTTGATCGGCCGTTTACAAACGTATTGAGAAACTCAACAACTACAACCACCGAGAAAC 720
Query 645 CATTC---GTCACCGGTGGTGAAGTTCAATGTAGCGGCGGCGGCGGAGTAGTGACGGAGT 701
||||| ||||||||||||||||||||| | |||||||||||||||||||||
Sbjct 721 CATTCGTTGTCACCGGTGGTGAAGTTCAA--T-------GCGGCGGAGTAGTGACGGAGT 771
Query 702 TCGAACCAAGCTCTGTTTGCTTAGCGAAGATGGTTCAGAACTTCATAGAAGAAAACAACG 761
|||| || || ||||||||||||||||||||||| ||||||||||| |||||||||||||
Sbjct 772 TCGAGCCGAGTTCTGTTTGCTTAGCGAAGATGGTACAGAACTTCATTGAAGAAAACAACG 831
Query 762 AGAAACAAGCTAAATGTGGACGTAATCGTTGCAATTGCTTTAACGGCAACAACGATAGCT 821
||||||||||||||||||||||||||||||| |||||||||||||||||||||||| | |
Sbjct 832 AGAAACAAGCTAAATGTGGACGTAATCGTTGTAATTGCTTTAACGGCAACAACGAT-GGT 890
Query 822 AC-TCCGATGATGAATCAGATCTATTCGGTGGTTCAATCGACGGTTGCGACGCTTCTGAT 880
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 891 TCTTCCGATGATGAATCAGATCTATTCGGTGGTTCAATCGACGGTTGCGACGCTTCTGAT 950
Query 881 CATCTCAAGAGTTTGGTTCCATGCACAACCGTCGGCGAGAGGAATCTGTTAGCCGACGCG 940
||||||||||||||| |||| |||||||||||||| ||||||||||||||||||||||||
Sbjct 951 CATCTCAAGAGTTTGATTCCGTGCACAACCGTCGGAGAGAGGAATCTGTTAGCCGACGCG 1010
Query 941 GCGAAGATTGTAGATAAGAACAAATCGGTGAAACGAAAAGACGATATGAAGAAGATCGTC 1000
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1011 GCGAAGATTGTAGATAAGAACAAATCGGTGAAACGAAAAGACGATATGAAGAAGATCGTC 1070
Query 1001 AACGAAGGACTCTTATCACTTAATTACAATTCTTCAATCTGCAAATCTAAATGGGATAAA 1060
|| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1071 AATGAAGGACTCTTATCACTTAATTACAATTCTTCAATCTGCAAATCAAAATGGGATAAA 1130
Query 1061 TCTCCTTCGTTCCCAGCTGGTGAATATGAGTATATAGATGTGATAATCGGAGAAGAAAGG 1120
|||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||
Sbjct 1131 TCTCCTTCGTTCCCAGCTGGTGAATACGAGTACATAGATGTGATAATCGGAGAAGAAAGG 1190
Query 1121 TTAATAATCGATGTAGATTTCCGATCAGAGTTCGATATAGCGAGACAAACGAGTGGTTAC 1180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1191 TTAATAATCGATGTAGATTTCCGATCAGAGTTCGATATAGCGAGACAAACGAGTGGTTAC 1250
Query 1181 AAGGCGTTGCTTCAATCTCTACCGTTCATTTTCGTCGGAAAATCTGATCGGTTAAGTCAG 1240
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1251 AAGGTGTTGCTTCAATCTCTACCGTTCATTTTCGTCGGAAAATCTGATCGGTTAAGTCAG 1310
Query 1241 ATTGTGTTTTTGATATCGGAGGCGGCGAAACAGAGTTTGAAGAAGAAAGGAATGCATTTT 1300
|| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1311 ATCGTGTTTTTGATATCGGAGGCGGCGAAACAGAGTTTGAAGAAGAAAGGAATGCCTTTT 1370
Query 1301 CCTCCGTGGAGGAAAGCTGAGTATATGCGATCTAAATGGTTATCTTCTTATACACGAGCT 1360
||||||||||||||||||||||| ||||||||||||||| | ||||||||||| ||||||
Sbjct 1371 CCTCCGTGGAGGAAAGCTGAGTACATGCGATCTAAATGGCTCTCTTCTTATACGCGAGCT 1430
Query 1361 TCTGTTGTCGTCGGAGATGTTGATGAGAAGGCGGAGACGGAGACGGATGTTGCGGTGGTG 1420
|| ||||| || ||| ||||||| ||| ||||| |||||||||| ||| || |
Sbjct 1431 TCCGTTGTTGT------TGTCGATGAGA---CGGTGACGGTGACGGATGTTACGGCGGCG 1481
Query 1421 -ACGGCGGACACGGCGGAGAGGGAGGTGGATAGTGTTGTAGAGATTGAGCTGGTTTTTGA 1479
| | ||| | || ||||| ||||||||||||||| |||||||||||||||||||||
Sbjct 1482 GATG-CGG-C--GGTGGAGAAGGAGGTGGATAGTGT---AGAGATTGAGCTGGTTTTTGA 1534
Query 1480 GGAGAAATGTTTATCTCCGAGAGTGAATATTATTAATTCTTCCTCCTCTCCAAACGGCGG 1539
|||||||||||||||||||||||||| | | ||||||||||||||||||||| || |||
Sbjct 1535 GGAGAAATGTTTATCTCCGAGAGTGA-T-TG-TTAATTCTTCCTCCTCTCCAACCGACGG 1591
Query 1540 CGATGATGACGTGGCGGTGGAGAGAGAAGTGAAGGCTGTCACCGGATTAGCTTCACTCTT 1599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1592 CGATGATGACGTGGCGGTGGAGAGAGAAGTGAAGGCTGTCACCGGATTAGCTTCACTCTT 1651
Query 1600 TAAGGAAAAGCCCTAAATAAAAAATTTTGGAGtttttttttt------ctttttCTAATT 1653
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1652 TAAGGAAAAGCCCTAAATAAAAAATTTTGGAGTTTTTTTTTTTAATTTCTTTTTCTAATT 1711
Query 1654 TTCAAGGTaaaaaaaCAATTATTAAAAATATATAACATTA-CCAAATATTCGCttttttt 1712
||||||||||||||| ||| |||| ||||||||| || ||| |||||||||||||||
Sbjct 1712 TTCAAGGTAAAAAAA---TTA--AAAA-TATATAACAGTAACCATATATTCGCTTTTTTT 1765
Query 1713 ttttgtttacctttttgtagtt-gttttgacctctcttgtttttt-ctttacaagggttt 1770
|||| || || ||||||||||| |||||||||||||||||||||| ||||||||||| ||
Sbjct 1766 TTTTCTT-ACATTTTTGTAGTTTGTTTTGACCTCTCTTGTTTTTTTCTTTACAAGGGGTT 1824
Query 1771 tttaccactttgtactttAGTACCGTCCACGGTGaaaaaaaT 1812
||||||||||||||||||||||||||||||||||||||||||
Sbjct 1825 TTTACCACTTTGTACTTTAGTACCGTCCACGGTGAAAAAAAT 1866
> AT3G22970.1 | Symbols: | Protein of unknown function (DUF506)
| chr3:8152038-8154149 FORWARD LENGTH=1935
Length=1935
Score = 2122 bits (1149), Expect = 0.0
Identities = 1677/1902 (88%), Gaps = 155/1902 (8%)
Strand=Plus/Plus
Query 1 AAATAAACAAATTATCACAAAAATACG-TTTCTTGTATAATAAttttttttCCTCTCTAG 59
|||| |||||||||||||||||||||| ||||||||||||||| |||| |||||||
Sbjct 30 AAATTAACAAATTATCACAAAAATACGTTTTCTTGTATAATAA----TTTT--TCTCTAG 83
Query 60 ATTTGTCGCTTACCTTTTGAACTTCTCCGGCGATGAATCTCGCCGGGAAAATGAATATTC 119
||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||
Sbjct 84 ATTTGTCGCTTACCTTTTGAAATTCTCCGGCGATGAATCTCGCCGGGAAAAGGAATATTC 143
Query 120 CGGTTACTATTTCTGTTTCCGTTACTAGTAACGCTGTCGACTCTTACCATCGCCGTCACG 179
|||||| |||||||||||||||||| | | || |||||||||||||||||||| |
Sbjct 144 CGGTTATTATTTCTGTTTCCGTTAC---T-A----GT-GACTCTTACCATCGCCGTCATG 194
Query 180 TCTTCCGTGaa-a---aaaaaCTCTG----ATCCTTCTCTTAGA------------Cttt 219
||||||||||| | || ||| ||||||||| |||| ||||
Sbjct 195 TCTTCCGTGAACATCGTCGGAC-CTGAAAAATCCTTCTCCTAGACTTTTTTTTTTTCTTT 253
Query 220 -tt-t-ttt-t-ttATTATTCTTTGCTTCGTTTTTGT---GAAGATGATCCGCTGATTTT 271
|| | ||| | ||||||||||||||||||||||||| |||||||||||||||| |||
Sbjct 254 CTTCTCTTTGTATTATTATTCTTTGCTTCGTTTTTGTGAAGAAGATGATCCGCTGA-TTT 312
Query 272 CAGAAg--tt-ttcttctggtttttagctgagagg-ttttgttagattctgtttcttctt 327
|||||| || ||||||||| |||||||||||||| ||||| ||||||||| | ||
Sbjct 313 CAGAAGTTTTCTTCTTCTGGATTTTAGCTGAGAGGTTTTTGGTAGATTCTG-----T-TT 366
Query 328 cttcttcttcttcttctctggtttttgaatccaattttggaaatttttgaagagtttctt 387
|||||||||| | ||| ||||||| ||||||| |||||| |||||||||||| ||| ||
Sbjct 367 CTTCTTCTTC--C-TCTGTGGTTTTCGAATCCAGTTTTGG-AATTTTTGAAGATTTTGTT 422
Query 388 tcgtttttgttgGAGAGATCTGAG--A-TT-----------AGTGTATATGAAATCAAAT 433
| |||| ||||| ||||||||||| | || |||||||||||||||||||
Sbjct 423 TAGTTTCTGTTGAAGAGATCTGAGATATTTGAACGAAGCAGAGTGTATATGAAATCAAAT 482
Query 434 CTGTG--------TTTGAATTTGAATTGACTTGGGGACTTGTGAAGAGAAGTTAGA---- 481
||||| ||||||||||||||||||| ||||||||| ||||||||||||
Sbjct 483 CTGTGAAAATTTCTTTGAATTTGAATTGACTT-TGGACTTGTG-AGAGAAGTTAGATCTT 540
Query 482 -----TCGAGAGCTATGCCATTTACGATGAAGATCCAACCGATTGATATCGATTCTTCTC 536
||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 541 CTTCTTCGTGAGCTATGCCATTTACGATGAAGATCCAACCGATTGATATCGATTCTTCAC 600
Query 537 CAGCTGTAGCTAGAGCTGAATCAGGCAACAAACCGGTGCTCAAATCTCGTCTCAAACGTT 596
|| | |||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 601 CAACCGTAGCTAGAGCTGAATCAGGAAACAAACCGGTGCTCAAATCTCGTCTCAAACGTT 660
Query 597 TGTTTGATCGTCCG-TT-C--AC-----GAGAAACGCAAC-A--ACAACCACAGAGAAAC 644
|||||||||| ||| || | || ||||||| |||| | |||||||| |||||||
Sbjct 661 TGTTTGATCGGCCGTTTACAAACGTATTGAGAAACTCAACAACTACAACCACCGAGAAAC 720
Query 645 CATTC---GTCACCGGTGGTGAAGTTCAATGTAGCGGCGGCGGCGGAGTAGTGACGGAGT 701
||||| ||||||||||||||||||||| | |||||||||||||||||||||
Sbjct 721 CATTCGTTGTCACCGGTGGTGAAGTTCAA--T-------GCGGCGGAGTAGTGACGGAGT 771
Query 702 TCGAACCAAGCTCTGTTTGCTTAGCGAAGATGGTTCAGAACTTCATAGAAGAAAACAACG 761
|||| || || ||||||||||||||||||||||| ||||||||||| |||||||||||||
Sbjct 772 TCGAGCCGAGTTCTGTTTGCTTAGCGAAGATGGTACAGAACTTCATTGAAGAAAACAACG 831
Query 762 AGAAACAAGCTAAATGTGGACGTAATCGTTGCAATTGCTTTAACGGCAACAACGATAGCT 821
||||||||||||||||||||||||||||||| |||||||||||||||||||||||| | |
Sbjct 832 AGAAACAAGCTAAATGTGGACGTAATCGTTGTAATTGCTTTAACGGCAACAACGAT-GGT 890
Query 822 AC-TCCGATGATGAATCAGATCTATTCGGTGGTTCAATCGACGGTTGCGACGCTTCTGAT 880
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 891 TCTTCCGATGATGAATCAGATCTATTCGGTGGTTCAATCGACGGTTGCGACGCTTCTGAT 950
Query 881 CATCTCAAGAGTTTGGTTCCATGCACAACCGTCGGCGAGAGGAATCTGTTAGCCGACGCG 940
||||||||||||||| |||| |||||||||||||| ||||||||||||||||||||||||
Sbjct 951 CATCTCAAGAGTTTGATTCCGTGCACAACCGTCGGAGAGAGGAATCTGTTAGCCGACGCG 1010
Query 941 GCGAAGATTGTAGATAAGAACAAATCGGTGAAACGAAAAGACGATATGAAGAAGATCGTC 1000
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1011 GCGAAGATTGTAGATAAGAACAAATCGGTGAAACGAAAAGACGATATGAAGAAGATCGTC 1070
Query 1001 AACGAAGGACTCTTATCACTTAATTACAATTCTTCAATCTGCAAATCTAAATGGGATAAA 1060
|| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1071 AATGAAGGACTCTTATCACTTAATTACAATTCTTCAATCTGCAAATCAAAATGGGATAAA 1130
Query 1061 TCTCCTTCGTTCCCAGCTGGTGAATATGAGTATATAGATGTGATAATCGGAGAAGAAAGG 1120
|||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||
Sbjct 1131 TCTCCTTCGTTCCCAGCTGGTGAATACGAGTACATAGATGTGATAATCGGAGAAGAAAGG 1190
Query 1121 TTAATAATCGATGTAGATTTCCGATCAGAGTTCGATATAGCGAGACAAACGAGTGGTTAC 1180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1191 TTAATAATCGATGTAGATTTCCGATCAGAGTTCGATATAGCGAGACAAACGAGTGGTTAC 1250
Query 1181 AAGGCGTTGCTTCAATCTCTACCGTTCATTTTCGTCGGAAAATCTGATCGGTTAAGTCAG 1240
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1251 AAGGTGTTGCTTCAATCTCTACCGTTCATTTTCGTCGGAAAATCTGATCGGTTAAGTCAG 1310
Query 1241 ATTGTGTTTTTGATATCGGAGGCGGCGAAACAGAGTTTGAAGAAGAAAGGAATGCATTTT 1300
|| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1311 ATCGTGTTTTTGATATCGGAGGCGGCGAAACAGAGTTTGAAGAAGAAAGGAATGCCTTTT 1370
Query 1301 CCTCCGTGGAGGAAAGCTGAGTATATGCGATCTAAATGGTTATCTTCTTATACACGAGCT 1360
||||||||||||||||||||||| ||||||||||||||| | ||||||||||| ||||||
Sbjct 1371 CCTCCGTGGAGGAAAGCTGAGTACATGCGATCTAAATGGCTCTCTTCTTATACGCGAGCT 1430
Query 1361 TCTGTTGTCGTCGGAGATGTTGATGAGAAGGCGGAGACGGAGACGGATGTTGCGGTGGTG 1420
|| ||||| || ||| ||||||| ||| ||||| |||||||||| ||| || |
Sbjct 1431 TCCGTTGTTGT------TGTCGATGAGA---CGGTGACGGTGACGGATGTTACGGCGGCG 1481
Query 1421 -ACGGCGGACACGGCGGAGAGGGAGGTGGATAGTGTTGTAGAGATTGAGCTGGTTTTTGA 1479
| | ||| | || ||||| ||||||||||||||| |||||||||||||||||||||
Sbjct 1482 GATG-CGG-C--GGTGGAGAAGGAGGTGGATAGTGT---AGAGATTGAGCTGGTTTTTGA 1534
Query 1480 GGAGAAATGTTTATCTCCGAGAGTGAATATTATTAATTCTTCCTCCTCTCCAAACGGCGG 1539
|||||||||||||||||||||||||| | | ||||||||||||||||||||| || |||
Sbjct 1535 GGAGAAATGTTTATCTCCGAGAGTGA-T-TG-TTAATTCTTCCTCCTCTCCAACCGACGG 1591
Query 1540 CGATGATGACGTGGCGGTGGAGAGAGAAGTGAAGGCTGTCACCGGATTAGCTTCACTCTT 1599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1592 CGATGATGACGTGGCGGTGGAGAGAGAAGTGAAGGCTGTCACCGGATTAGCTTCACTCTT 1651
Query 1600 TAAGGAAAAGCCCTAAATAAAAAATTTTGGAGtttttttttt------ctttttCTAATT 1653
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1652 TAAGGAAAAGCCCTAAATAAAAAATTTTGGAGTTTTTTTTTTTAATTTCTTTTTCTAATT 1711
Query 1654 TTCAAGGTaaaaaaaCAATTATTAAAAATATATAACATTA-CCAAATATTCGCttttttt 1712
||||||||||||||| ||| |||| ||||||||| || ||| |||||||||||||||
Sbjct 1712 TTCAAGGTAAAAAAA---TTA--AAAA-TATATAACAGTAACCATATATTCGCTTTTTTT 1765
Query 1713 ttttgtttacctttttgtagtt-gttttgacctctcttgtttttt-ctttacaagggttt 1770
|||| || || ||||||||||| |||||||||||||||||||||| ||||||||||| ||
Sbjct 1766 TTTTCTT-ACATTTTTGTAGTTTGTTTTGACCTCTCTTGTTTTTTTCTTTACAAGGGGTT 1824
Query 1771 tttaccactttgtactttAGTACCGTCCACGGTGaaaaaaaT 1812
||||||||||||||||||||||||||||||||||||||||||
Sbjct 1825 TTTACCACTTTGTACTTTAGTACCGTCCACGGTGAAAAAAAT 1866
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 91917197895
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5