BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg479832 Length=1048 Score E Sequences producing significant alignments: (Bits) Value AT3G23190.1 | Symbols: | HR-like lesion-inducing protein-relat... 1445 0.0 > AT3G23190.1 | Symbols: | HR-like lesion-inducing protein-related | chr3:8279289-8280912 FORWARD LENGTH=1056 Length=1056 Score = 1445 bits (782), Expect = 0.0 Identities = 973/1062 (92%), Gaps = 26/1062 (2%) Strand=Plus/Plus Query 1 TTCAATTATTCCATCATCTACCATCTAGTCGTCTCCTTGGTGATCTAAGGACTTTATCAT 60 ||||||||||||||||| |||||| |||||||||||||||||||| || |||| |||| Sbjct 5 TTCAATTATTCCATCATTTACCATTTAGTCGTCTCCTTGGTGATCCAAATACTTCATCAC 64 Query 61 CTTCCTTCGTAGCAAATTCTCTTCGTCTGTCTCATACATTTAAACACACATAGATATACA 120 |||||||| ||||||||||||||||||| ||||||||||||||||| ||||||| ||||| Sbjct 65 CTTCCTTCATAGCAAATTCTCTTCGTCTATCTCATACATTTAAACAAACATAGACATACA 124 Query 121 CTTAAT-AATCTTCCTTAATTTTAAGaaaaaaaaCATGGAGAAAACCCAAGAATCGGTGG 179 | |||| |||||||||||| ||||| ||||||||||||||||||||||||||||| |||| Sbjct 125 C-TAATCAATCTTCCTTAA-TTTAA-AAAAAAAACATGGAGAAAACCCAAGAATCAGTGG 181 Query 180 TTAGATATGGAAGAAAGATAGAGAAAATGCCGTTTCTTATGCCTGCCGGTCGAGTTGTCT 239 |||||||||||| |||||| ||||||||||| | ||||||||| ||||| |||||||||| Sbjct 182 TTAGATATGGAAAAAAGATCGAGAAAATGCCATATCTTATGCCCGCCGGCCGAGTTGTCT 241 Query 240 TTGCAACTGCGTTCATCGTGTCTGCTTGGAGAGAGTATTATGGTTTCGGAGTAGCTGCCG 299 ||||| |||||||| ||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 242 TTGCATCTGCGTTCCTCGTGTCTGCTTGGAGAGAGTATTATGGTTTCGGATTAGCTGCCG 301 Query 300 ATGAGTTAAGACCAAAACTTGGTTTCTTTGAGAACCAGGCAAA-GTACATAGTTTCTCTT 358 ||||||||||||||||||||||||||||||||||||||||||| | ||||||| ||||| Sbjct 302 ATGAGTTAAGACCAAAACTTGGTTTCTTTGAGAACCAGGCAAAAGC-CATAGTTGCTCTT 360 Query 359 GGTATAATGATGAAGTTTATTGGAGGGATCTTATTCATCTTCAACACCTACCTAGGAGCT 418 |||||| ||||||||||| ||||||||||||||||||||||||| || ||| |||||||| Sbjct 361 GGTATATTGATGAAGTTTGTTGGAGGGATCTTATTCATCTTCAATACGTACGTAGGAGCT 420 Query 419 TCGCCTTTT-CTTGTATACCAAGCCATTTTGAGTCCGATATTGTACGATTTCTACAATCG 477 ||| |||| ||||||||||||||||| ||||| |||||||||||||||||||||||||| Sbjct 421 GCGC-TTTTGCTTGTATACCAAGCCATCTTGAGCCCGATATTGTACGATTTCTACAATCG 479 Query 478 CGATTTTGATAGAGACCATTTCACCATTTTCTACACAAAGTTCAAAGAGTTTGTG-AACG 536 ||||| |||||||||||||||||| |||||||||||||||||||||| |||||| || | Sbjct 480 CGATTACGATAGAGACCATTTCACCGTTTTCTACACAAAGTTCAAAGAATTTGTGGAA-G 538 Query 537 AGACGGTGTCAGCAGATGATGGAGTGGCCATGAGCCTCTATACCTCTATGGTTAACGAAG 596 ||||| |||||| |||| |||||||||||||||||||||||||||| |||||||||||| Sbjct 539 AGACGACGTCAGCTGATGGTGGAGTGGCCATGAGCCTCTATACCTCTGTGGTTAACGAAG 598 Query 597 AATCGCGCCAGAAATTC-TGCGATCAGCTTAACGAGATTGCAAGACTAGCCATCTCGAAT 655 ||||||||||||||||| | ||||||||||||||||||||| ||| | |||||||||||| Sbjct 599 AATCGCGCCAGAAATTCAT-CGATCAGCTTAACGAGATTGCGAGAATCGCCATCTCGAAT 657 Query 656 CCTCTATTCACACCAAGCGAGTTT-AACACATTGTTCATTAGGTTTATTAAGGGTGTTGG 714 |||||||||||||||||||| ||| |||||||||||||| |||||||||||||||||||| Sbjct 658 CCTCTATTCACACCAAGCGA-TTTCAACACATTGTTCATAAGGTTTATTAAGGGTGTTGG 716 Query 715 AATAGTAGCTGCATTGGCGTGTTTCATGGCGATGAAACATAGGCATGGGGTGCTCATCAA 774 ||||| ||||||||||||||| ||||| ||||||||||||||||||| |||||||||| | Sbjct 717 AATAGCAGCTGCATTGGCGTGCTTCATTGCGATGAAACATAGGCATGCGGTGCTCATCGA 776 Query 775 GAAGACGTCCAAGAAGCAAAAAACTAACTGATCC-AGTTTGGCTTATTTACTTGTG--TC 831 |||||||||||||||||||||||||||||||||| | ||||||||||||||||||| || Sbjct 777 GAAGACGTCCAAGAAGCAAAAAACTAACTGATCCGA-TTTGGCTTATTTACTTGTGGATC 835 Query 832 TCAATCAACAAGTGAtttctttgtttttcaataatttttagtttcttttgaagatttgtg 891 |||||||||||||||| ||| ||||||||||||||| |||||||||||| |||||||||| Sbjct 836 TCAATCAACAAGTGATCTCTATGTTTTTCAATAATTATTAGTTTCTTTT-AAGATTTGTG 894 Query 892 agttttttcttttgGCTATGAATAAATAGCAAGTATTTGATTATGATGTTGTA-T-T--T 947 |||||| ||||| |||||||||||||||||||||||| |||||||||||||| | | | Sbjct 895 AGTTTTG-CTTTTTGCTATGAATAAATAGCAAGTATTTAATTATGATGTTGTACTGTAAT 953 Query 948 T-CATTTCCCGAACAAATTCAAATTTCCTTCGGATCATTTGATTTAGttttttctgtttt 1006 | ||| ||| ||||||||| |||||||||||||||||||||||| || ||||| |||||| Sbjct 954 TTCATATCC-GAACAAATTTAAATTTCCTTCGGATCATTTGATTAAGCTTTTTATGTTTT 1012 Query 1007 ttttttCTTTCTATATGGTAAGCTTTTTAAAAAACTAATTAA 1048 ||||||||| ||||||||||||||||| ||||||||||||| Sbjct 1013 ATTTTTCTTTATATATGGTAAGCTTTTTTAAAAACTAATTAA 1054 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 51389532381 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5