BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg479878
Length=2499
Score E
Sequences producing significant alignments: (Bits) Value
AT3G23660.2 | Symbols: | Sec23/Sec24 protein transport family ... 2545 0.0
AT4G14160.1 | Symbols: | Sec23/Sec24 protein transport family ... 2085 0.0
> AT3G23660.2 | Symbols: | Sec23/Sec24 protein transport family
protein | chr3:8513457-8517790 REVERSE LENGTH=2646
Length=2646
Score = 2545 bits (1378), Expect = 0.0
Identities = 1563/1649 (95%), Gaps = 25/1649 (2%)
Strand=Plus/Plus
Query 19 CTTCCAAC-AATGGCGGAGACGGCGAATACAGATCTAGAAGGAATCG-TCGGAGTTCGTA 76
|||||||| |||||||||||| ||||||||||||||||||||||||| | ||||||||||
Sbjct 52 CTTCCAACGAATGGCGGAGACTGCGAATACAGATCTAGAAGGAATCGAT-GGAGTTCGTA 110
Query 77 TGACATGGAACGTTTGGCCTCGTTCTAAAGTTGAAGCTAGCAAATGCGTGATCCCACTCG 136
||||||||||||| ||||||| ||| |||| |||||||||||||||||||||||||||||
Sbjct 111 TGACATGGAACGTCTGGCCTCATTCCAAAGCTGAAGCTAGCAAATGCGTGATCCCACTCG 170
Query 137 CCGCTTGCATTTCTCCGATCCGGCGACATTCCGATATCCCTACCCTTCCTTACGCACCGC 196
||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct 171 CCGCTTGCATTTCTCCGATCCGGCGACATGCCGATATCCCTACTCTTCCTTACGCACCGC 230
Query 197 TCCGATGCCGGACTTGTTCCGCAGCGTTAAACGCTTACGCACAAGTCGATTTCACCGCAA 256
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 231 TCCGATGCCGGACTTGTTCCGCTGCGTTAAACGCTTACGCACAAGTCGATTTCACCGCAA 290
Query 257 AGCTTTGGATCTGTCCCTTTTGTTATCAGCGTAATCATTTCCCGCCTCATTATCATGTGA 316
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 291 AGCTTTGGATCTGTCCGTTTTGTTATCAGCGTAATCATTTCCCGCCTCATTATCATGTGA 350
Query 317 TCTCTGAGACTAATCTTCCTGGTGAGCTTTATCCTCAGTATACTACTGTTGAATACACGC 376
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
Sbjct 351 TCTCTGAGACTAATCTTCCTGGTGAGCTTTATCCTCAGTACACTACTGTTGAATACACTC 410
Query 377 TTCCTCCGCCTGTTGCTGGTCAATTTGATCCGAGGAATGGGGAAGTTCCG-TCGCAGGCG 435
||||||||||||| || | | | || |||| || | | | || | | ||
Sbjct 411 TTCCTCCGCCTGTAGC----C-A----A--CGGGGAA--GGTCTGGT-GGATC-C-GCCG 454
Query 436 GTGTTTGTGTTTGTTCTTGATACTTGTATGATTGAAGAAGAATTAGATTTTGCTAAATCG 495
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 455 GTGTTTGTGTTTGTTCTTGATACTTGTATGATTGAAGAAGAATTGGATTTTGCTAAATCG 514
Query 496 GCGCTTAAACAGGCGATTGGATTGCTTCCGGAGAATGCTTTGGTTGGATTTGTGTCGTTT 555
||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 515 GCGCTTAAACAAGCGATTGGGTTGCTTCCGGAGAATGCTTTGGTTGGATTTGTGTCGTTT 574
Query 556 GGTACTCAGGCTCATGCGCATGAATTGGGATTCTCTGAGATGTCTAAGGTTTTTGTTTTT 615
|||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||
Sbjct 575 GGTACTCAGGCTCATGTACATGAATTGGGATTCTCTGAGATGTCTAAAGTTTTTGTTTTT 634
Query 616 AAAGGAGATAAAGAGATTTCTAAAGATCAGATTTTGGATCAGTTGGGGCTTGGAGGTTCT 675
|||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||
Sbjct 635 AAAGGAGATAAAGAGATTTCGAAAGATCAGATTTTGGATCAGTTGGGGCTTGGTGGTTCT 694
Query 676 TCAAGGAGA-TA--TACGAAAGGAGCTCAAAATGGCGTCCCGAGTTCTGGTTTGAATAGA 732
|| |||||| | | | |||||| ||||||||||| |||||||||||||||||||||||
Sbjct 695 TCTAGGAGAGGAGGTTCTAAAGGACCTCAAAATGGCTTCCCGAGTTCTGGTTTGAATAGA 754
Query 733 TTCTTGTTGCCTGCTTCGGAGTGCGAATTCACACTCAACTCGCTTTTGGATGAGCTACAA 792
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 755 TTCTTGTTGCCTGCTTCCGAGTGCGAATTCACACTCAACTCGCTTTTGGATGAGCTACAA 814
Query 793 AGTGATCAGTGGCCTGTTCAGCCAGGTCATCGGTCCCAACGATGCACAGGTGTGGCATTG 852
|||||||||||||||||| ||||||||||||||||||||||||| ||||| |||||||||
Sbjct 815 AGTGATCAGTGGCCTGTTAAGCCAGGTCATCGGTCCCAACGATGTACAGGCGTGGCATTG 874
Query 853 AGTGTTGCTGCAGGATTGCTTGGAGCTTGCTTGCCTGGAACTGGGGCTAGAATTGTAGCT 912
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 875 AGTGTAGCTGCAGGATTGCTTGGAGCTTGCTTGCCTGGAACTGGGGCTAGAATTGTAGCT 934
Query 913 TTGATCGGAGGTCCATGTACAGAAGGCCCTGGAACGATTGTCTCAAAAGATTTATCGGAT 972
|||||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||||
Sbjct 935 TTGATCGGAGGTCCATGTACGGAAGGCCCTGGAACGATTGTCTCAAAGGATTTGTCGGAT 994
Query 973 CCTGTGCGATCTCACAAAGATCTAGATAAAGATGCCGCTCCTTACTATAAAAAGGCTGTC 1032
|||||||| |||||||||||| ||||||||||||||||||| |||||||| |||||||||
Sbjct 995 CCTGTGCGTTCTCACAAAGATTTAGATAAAGATGCCGCTCCGTACTATAAGAAGGCTGTC 1054
Query 1033 AAGTTTTATGATAGCATCGCAAAGCAACTAGTCACTCAGGGTCATGTGCTAGACCTTTTT 1092
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1055 AAGTTTTATGATAGCATCGCAAAGCAACTAGTCACTCAGGGTCATGTTCTAGACCTTTTT 1114
Query 1093 GCTTCTGCACTTGATCAGGTTGGGGTTGCTGAGATGAAAGTTGCAGTTGAAAGATCTGGT 1152
||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||
Sbjct 1115 GCTTCTGCACTTGATCAGGTTGGTGTTGCTGAGATGAAAGTTGCAGTTGAAAGAACTGGT 1174
Query 1153 GGCCTTGTTGTTCTGTCTGAAAGTTTTGGCCATTCCGTATTCAAAGATTCCTTCAAGCGA 1212
||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||
Sbjct 1175 GGCCTTGTTGTTCTGTCTGAAAGTTTTGGCCATTCTGTTTTCAAAGATTCCTTCAAGCGA 1234
Query 1213 GTATTTGAAGATGGCGACCAGGCTCTTGGCCTCTGCTTTAATGGGACGCTTGAGATCTGT 1272
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1235 GTATTTGAAGATGGCGATCAGGCTCTTGGCCTCTGCTTTAATGGGACGCTTGAGATCTGT 1294
Query 1273 TGTTCACAGGACATCAAAATTCAAGGGGCTATTGAACCATGCTCATCATTAGAGAAGAAA 1332
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 1295 TGTTCACAGGACATCAAAATTCAAGGGGCTATTGGGCCATGCTCATCATTAGAGAAGAAA 1354
Query 1333 GGGGCTAGTGTTGCTGATACGGTTATCGGAGAAGGGAATACTTCTGCTTGGAGGTTGTGT 1392
|| |||||||||||||| |||||||||||||| |||||||||||||||||||||||||||
Sbjct 1355 GGTGCTAGTGTTGCTGACACGGTTATCGGAGAGGGGAATACTTCTGCTTGGAGGTTGTGT 1414
Query 1393 GGCCTTGATAAAACTACGTGTTTGACAG-TATTTTTTGACATATCTTCAAGCGGGTCAAA 1451
|||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||
Sbjct 1415 GGCCTTGATAAAACTACGTGTTTGAC-GATATTTTTTGACATATCTTCAAGCGGGTCAAA 1473
Query 1452 TACTCCTGGAGCTGCGAATCCACAGTTTTATTTGCAGTTTCTCACAATTTACCAAAACCC 1511
||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||
Sbjct 1474 TACTCCTGGAGCTGCGAATCCACAGTTTTATTTGCAGTTTCTCACAAGTTATCAAAACCC 1533
Query 1512 TGAAGGTCAAACATTGCTCCGAGTTACTACTGTATGCAGACAGTGGATAGACAGTGCTGT 1571
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1534 TGAAGGTCAAACATTGCTCCGGGTTACTACTGTATGCAGACAGTGGATAGACAGTGCTGT 1593
Query 1572 GAGTTCAGAGGAACTTGTGCAAGGCTTTGATCAAGAAACTGCTGCTGTGGTCATGGCTAG 1631
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1594 GAGTTCAGAGGAACTTGTGCAAGGCTTTGACCAAGAAACTGCTGCTGTGGTCATGGCTAG 1653
Query 1632 ATTAGCTTCTTTAAAAATGGAGTCAGAGG 1660
|||||||||||| ||||||||||||||||
Sbjct 1654 ATTAGCTTCTTTGAAAATGGAGTCAGAGG 1682
Score = 1293 bits (700), Expect = 0.0
Identities = 812/862 (94%), Gaps = 23/862 (3%)
Strand=Plus/Plus
Query 1660 GAGGGATTTGATGCTACTCGGTGGTTAGATCGGAATCTCATTCGTCTTTGTTCAAAGTTT 1719
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||
Sbjct 1760 GAGGGATTTGATGCTACTCGCTGGTTAGATCGGAATCTCATTCGTCTTTGTTCAAAATTT 1819
Query 1720 GGAGACTATAGAAAGGATGATCCAGCCTCATTCACGCTGAATCCCTATTTTTCGTTATTT 1779
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1820 GGAGACTATAGAAAGGATGATCCAGCCTCCTTCACGCTGAATCCCTATTTTTCGTTATTT 1879
Query 1780 CCTCAATTTATATTTAATCTGCGGCGATCCCAGTTTGTTCAGGTATTTAACAATAGCCCT 1839
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1880 CCTCAATTTATATTTAATCTGCGGCGATCGCAGTTTGTTCAGGTATTTAACAATAGCCCT 1939
Query 1840 GATGAAACCGCATACTTCTGCATGTTATTAAACCGGGAGAATATTTCGAATGCAACTGTC 1899
|||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1940 GATGAAACCGCATATTTCTGCATGTTACTAAACCGGGAGAATATTTCGAATGCAACTGTC 1999
Query 1900 ATGATCCAACCGTCATTGACAACATATTCATTCAATTCACCAGCCGAACCAGCTTTGCTA 1959
|||||||||||||| || |||||||||||||||||||||||||| |||||||||||||||
Sbjct 2000 ATGATCCAACCGTCGTTAACAACATATTCATTCAATTCACCAGCTGAACCAGCTTTGCTA 2059
Query 1960 GATGTGGCTTCCATTGCAGCCGATCGAATTCTTTTATTAGATGCATATTTTAGTGTTGTT 2019
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 2060 GATGTGGCTTCCATTGCAGCCGATCGAATTCTTTTATTAGATGCATATTTTAGCGTTGTT 2119
Query 2020 GTCTTCCATGGAATGACTATAGCACAATGGCGAAATATGGGTTATCATCATCAGCCTGAA 2079
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2120 GTCTTCCATGGAATGACTATAGCACAATGGCGAAATATGGGTTATCATCATCAGCCTGAA 2179
Query 2080 CACCAGGCTTTTGCTGAGTTATTGCAAGCTCCTCAAGAGGATTCCCAGATGCTAGTCCGT 2139
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 2180 CACCAGGCTTTTGCTGAGTTATTGCAAGCTCCTCAAGAGGATTCCCAGATGATAGTCCGG 2239
Query 2140 GAGCGTTTCCCTGTCCCAAGATTAGTTGTCTGTGATCAGCACGGCTCGCAGGCAAGGTTT 2199
|| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 2240 GAACGTTTCCCTGTCCCAAGATTAGTTGTCTGTGATCAGCATGGCTCGCAGGCAAGGTTT 2299
Query 2200 TTATTGGCAAAGCTGAATCCATCAGCGACGTACAACAATGCAAACGAAATGTCGACAGGG 2259
|||||||| |||||||||||||||||||||||||||||||||||||| ||||| ||||||
Sbjct 2300 TTATTGGCGAAGCTGAATCCATCAGCGACGTACAACAATGCAAACGAGATGTCTACAGGG 2359
Query 2260 TCAGATGTGATATTCACAGACGACGTTAGCCTTCAAGTCTTCTTTGAACATCTTCAGAAG 2319
|||||||||||||||||||||||||| |||||||||||||||||||| ||||| ||||||
Sbjct 2360 TCAGATGTGATATTCACAGACGACGTGAGCCTTCAAGTCTTCTTTGAGCATCTCCAGAAG 2419
Query 2320 CTGGTAGTGCAGTCTTGAGTAGTCCTTTTGTTTCTTTACTTTACATTAAATTAAACTTCA 2379
||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 2420 CTGGTTGTGCAGTCTTGAGTAGTCCATTTGTTTCTTTACTTTACATTAAATTAAACTTCA 2479
Query 2380 Gtttacac--------------cat-tt--tt-catctactatcattattttgttttttc 2421
| ||||| ||| || || |||||||||||||||||||||||||||
Sbjct 2480 CTGTACACGATTTTTTTTTTATCATCTTACTTTCATCTACTATCATTATTTTGTTTTTTC 2539
Query 2422 tttgataaaatttt-tgtaacat--t-acttttctgtttttgtttCAAGGACTTAGATAT 2477
||||||||| |||| |||||||| | |||||||||||||||||||||||||||| ||||
Sbjct 2540 TTTGATAAA-TTTTCTGTAACATCATTACTTTTCTGTTTTTGTTTCAAGGACTTAAATAT 2598
Query 2478 ACAAAGGGAGAAGAGATAAAAT 2499
|||||| |||||||||| ||||
Sbjct 2599 ACAAAGTGAGAAGAGATGAAAT 2620
> AT4G14160.1 | Symbols: | Sec23/Sec24 protein transport family
protein | chr4:8167465-8173365 FORWARD LENGTH=2770
Length=2770
Score = 2085 bits (1129), Expect = 0.0
Identities = 1932/2312 (84%), Gaps = 86/2312 (4%)
Strand=Plus/Plus
Query 67 GGAGTTCGTATGACATGGAACGTTTGGCCTCGTTCTAAAGTTGAAGCTAGCAAATGCGTG 126
|||||||||||||| |||||| |||||||||| |||| |||||||| ||||| || |||
Sbjct 167 GGAGTTCGTATGACTTGGAACCTTTGGCCTCGCACTAAGGTTGAAGCAAGCAAGTGTGTG 226
Query 127 ATCCCACTCGCCGCTTGC-ATTTCTCCGATCCGGCGACATTCCGATATCCCT-ACCCTTC 184
|| || |||||||||| | ||||| |||||||| || || || ||||| | | || |
Sbjct 227 ATTCCTCTCGCCGCTT-CAATTTCACCGATCCGTCGTCACCCCCTTATCCTTGA-TCTCC 284
Query 185 CTTACGCACCGCTCCGA-TGCCGGACTTGTTCCGCAGCGT-TAAACG-CTTACGCACAAG 241
|||| || || || ||| ||| ||||||| || | | | |||| ||| ||| | |
Sbjct 285 CTTATGCTCCTCT-CGATTGCAAGACTTGTAAAGC-TCTTCTCAACGCCTT-CGCTCGTG 341
Query 242 TCGATTTCACCGCAAAGCTTTGGATCTGTCCCTTTTGTTATCAGCGTAATCATTTCCCGC 301
| |||||| |||| | | ||| ||||||| ||||| ||||| | |||||||||||
Sbjct 342 TTGATTTCGCCGCTATGAACTGGGTCTGTCCTTTTTGCTATCATAGGAATCATTTCCCTT 401
Query 302 CTCATTATCATGT-GATCTCTGAGACTAATCTTCCTGGTGAGCTTTATCCTCAGTATACT 360
||||||| ||| | ||||||||||| |||||| ||||||||||||||||| ||||| |||
Sbjct 402 CTCATTACCAT-TCGATCTCTGAGATTAATCTCCCTGGTGAGCTTTATCCCCAGTACACT 460
Query 361 ACTGTTGAATACACGCTTCCTCCGCCTGTTGCTGGTCAATTTGATCCGAGGAATGGGGAA 420
|||||||| |||||| || || |||| | | ||| | | | | | |
Sbjct 461 ACTGTTGAGTACACG-TT--GCCTCCTGAT-C-CGTC-------T-C---G--T-GTG-- 499
Query 421 GTTCCGTCGCAGGCGGTGTTTGTGTTTGTTCTTGATACTTGTATGATTGAAGAAGAATT- 479
||| | || | ||||||||||||||||| ||||| || |||||||| ||||||||
Sbjct 500 CCTCC-AC-CA-CCTGTGTTTGTGTTTGTTCTCGATACGTGCATGATTGAGGAAGAATTG 556
Query 480 AGATTTTGCTAAATCGGCGCTTAAACAGGCGATTGGATTGCTTCCGGAGAATGCTTTGGT 539
|| | ||| |||||||| ||||| |||||||| || |||||||||||||||||||||||
Sbjct 557 GGA-TATGCCAAATCGGCTCTTAAGCAGGCGATCGGGTTGCTTCCGGAGAATGCTTTGGT 615
Query 540 TGGATTTGTGTCGTTTGGTACTCAGGCTCATGCGCATGAATTGGGATTCTCTGAGATGTC 599
||| |||||||||||||||||||||||||||| |||||||||||| ||||||||||||||
Sbjct 616 TGGGTTTGTGTCGTTTGGTACTCAGGCTCATGTGCATGAATTGGGGTTCTCTGAGATGTC 675
Query 600 TAAGGTTTTTGTTTTTAAAGG-AGATAAAG-AGATTTCTAAAGATCAGATTTTGGATCAG 657
||| |||||||| |||||||| | |||||| || || | || ||||| ||||||||||||
Sbjct 676 TAAAGTTTTTGTCTTTAAAGGCA-ATAAAGAAG-TTACCAAGGATCAAATTTTGGATCAG 733
Query 658 TTGGGGCTTGGAG-GTTCTTCAAGGAGA-----TA-TAC---G------AAAGGAGCTCA 701
||||||||||| | |||||| |||||| || | | | |||||||| ||
Sbjct 734 TTGGGGCTTGG-GTCTTCTTCGAGGAGAGCTCCTACTTCTGGGTTTTCTAAAGGAGCGCA 792
Query 702 AAATGGCGTCCCGAGTTCTGGT-TTGAATAGATTCTTGTTGCCTGCTTCGGAGTGCGAAT 760
||| || ||| |||||| ||| ||| | |||||| || |||| ||||||||||| ||||
Sbjct 793 AAACGGATTCCAGAGTTCCGGTGTTG-ACAGATTCCTGCTGCCCGCTTCGGAGTGTGAAT 851
Query 761 TCACACTCAACTCGCTTTTGGATGAGCTACAAAGTGATCAGTGGCCTGTTCAGCCAGGTC 820
|||||| ||| ||||||||||||||| ||| || ||||||||||||||||||||||
Sbjct 852 ACACACTGGACTTGCTTTTGGATGAGCTCCAATCAGACCAGTGGCCTGTTCAGCCAGGTC 911
Query 821 ATCGGT-CCCAACGATGCACAGGTGTGGCATTGAGTGTTGCTGCAGGATTGCTTGGAGCT 879
||| || |||||||||||||||| || ||||||||||| |||||||||||||||||||||
Sbjct 912 ATC-GTCCCCAACGATGCACAGGGGTTGCATTGAGTGTAGCTGCAGGATTGCTTGGAGCT 970
Query 880 TGCTTGCCTGGAACTGGGGCTAGAATTGTAGCTTTGATCGGAGGTCCATGTACAGAAGGC 939
||||| ||||||||||| |||||||||||||||||| | ||||||||||||||||| |||
Sbjct 971 TGCTTACCTGGAACTGGTGCTAGAATTGTAGCTTTGGTTGGAGGTCCATGTACAGAGGGC 1030
Query 940 CCTGGAACGATTGTCTCAAAAGATTTATCGGATCCTGTGCGATCTCACAAAGATCTAGAT 999
|||||||||||| ||||||| ||||| || ||||||||||| || |||||||||||||||
Sbjct 1031 CCTGGAACGATTATCTCAAAGGATTTGTCAGATCCTGTGCGCTCCCACAAAGATCTAGAT 1090
Query 1000 AAAGATGCCGCTCCTTACTATAAAAAGGCTGTCAAGTTTTATGATAGCATCGCAAAGCAA 1059
|||||||| |||||||| |||||||| ||||| |||||||||||||| || ||||||||
Sbjct 1091 AAAGATGCTGCTCCTTATTATAAAAAAGCTGTAAAGTTTTATGATAGTATTGCAAAGCAG 1150
Query 1060 CTAGTCACTCAGGGTCATGTGCTAGACCTTTTTGCTTCTGCACTTGATCAGGTTGGGGTT 1119
|| ||| |||||||||||||| |||||||||| |||||||||||||||||||| ||||||
Sbjct 1151 CTTGTCGCTCAGGGTCATGTGTTAGACCTTTTCGCTTCTGCACTTGATCAGGTCGGGGTT 1210
Query 1120 GCTGAGATGAAAGTTGCAGTTGAAAGAT-CTGGTGGCCTTGTTGTTCTGTCTGAAAGTTT 1178
||||| |||||||| || |||||||| | | ||||| || ||||||||||||||||||||
Sbjct 1211 GCTGAAATGAAAGTAGCCGTTGAAAG-TACCGGTGGTCTCGTTGTTCTGTCTGAAAGTTT 1269
Query 1179 TGGCCATTCCGTATTCAAAGATTCCTTCAAG-CGAGTATTTGAAGATGGCGACCAGGCTC 1237
||||||||| ||||| ||||||||||| ||| || | |||||||||||||| || |||
Sbjct 1270 TGGCCATTCTGTATTTAAAGATTCCTTTAAGAGGA-TGTTTGAAGATGGCGAGCACTCTC 1328
Query 1238 TTGGCCTCTGCTTTAATGGGACGCTTGAGATCTGTTGTTCACAGGACATCAAAATTCAAG 1297
|||| |||||||| ||||| ||||||||||| ||||||| | ||||||||||||||||
Sbjct 1329 TTGGTCTCTGCTTCAATGGCACGCTTGAGATAAATTGTTCAAAAGACATCAAAATTCAAG 1388
Query 1298 GGGCTATTGAACCATGCTCATCATTAGAGAAGAAAGGGGCTAGTGTTGCTGATACGGTTA 1357
||| ||| | || |||||||||||||| |||||||| | | ||||||||| || || |
Sbjct 1389 GGGTTATCGGGCCTTGCTCATCATTAGAAAAGAAAGGTCCCAATGTTGCTGACACAGTCA 1448
Query 1358 TCGGAGAAGGGAATACTTCTGCTTGGAGGTTGTGTGGCCTTGATAAAACTACGTGTTTGA 1417
| ||||| |||||||| |||||||| ||||||||||| || || | ||| || ||||
Sbjct 1449 TTGGAGAGGGGAATACCAGTGCTTGGAAATTGTGTGGCCTCGACAAGAGTACCTGCTTGA 1508
Query 1418 CAGTATTTTTTGA-CATATCTTCAAGCGGGTCAAATACTCCTGGAGCTGCGAATCCA-CA 1475
| ||||| ||||| | ||||||||| |||||||| | ||||||||||| ||| || ||
Sbjct 1509 CTGTATTCTTTGATC-TATCTTCAACCGGGTCAACTGCTCCTGGAGCTTTAAAT-CAGCA 1566
Query 1476 GTTTTATTTGCAGTTTCTCACAATTTACCAAAACCCTGAAGGTCAAACATT-GCTCCGAG 1534
||| |||||||||||| |||||| ||||||||| |||||||| ||| || || ||| |
Sbjct 1567 GTTGTATTTGCAGTTTATCACAAGATACCAAAACTCTGAAGGTAAAAGTTTGGC-CCGGG 1625
Query 1535 TTACTACTGTATGCAGACAGTGGATAGACAGTGCTGTGAGTTCAGAGG--AA-CTTGTGC 1591
|||| ||| || |||||||||| |||| | ||||||||| |||||| || |||||||
Sbjct 1626 TTACAACTTTAACCAGACAGTGGGTAGATACTGCTGTGAGCACAGAGGTAAATCTTGTGC 1685
Query 1592 AAGGCTTTGATCAAGAAACTGCTGCTGTGGTCATGGCTAGATTAGCTTCTTTAAAAATGG 1651
|||||||||| |||||||||||||| ||||| ||||| |||||| |||| ||||||||||
Sbjct 1686 AAGGCTTTGACCAAGAAACTGCTGCAGTGGTTATGGCAAGATTAACTTCCTTAAAAATGG 1745
Query 1652 AGTCAGAGGAGGGATTTGATGCTACTCGGTGGTTAGATCGGAATCTCATTCGTCTTTGTT 1711
| ||||||||||||||||||| ||||||||| ||||||||| |||||||||||| ||||
Sbjct 1746 AAACAGAGGAGGGATTTGATGCAACTCGGTGGCTAGATCGGACTCTCATTCGTCTGTGTT 1805
Query 1712 CAAAGTTTGGAGACTATAGAAAGGATGATCCAGCCTCATTCACGCTGAATCCCTATTTTT 1771
|||| ||||| || |||||||||||||||||| |||| || |||||||| || ||| ||
Sbjct 1806 CAAAATTTGGTGAATATAGAAAGGATGATCCAACCTCGTTTACGCTGAAACCATATCTTA 1865
Query 1772 CGTTATTTCCTCAATTTATATTTAATCTGCGGCGATCCCAGTTTGTTCAGGTATTTAACA 1831
| || || |||||||| || ||||| ||| |||| || |||||||||||||| |||||||
Sbjct 1866 CATTGTTCCCTCAATTCATGTTTAACCTGAGGCGGTCACAGTTTGTTCAGGTCTTTAACA 1925
Query 1832 ATAGCCCTGATGAAACCGCATACTTCTGCATGTTATTAAACCGGGAGAATATTTCGAATG 1891
|||| ||||||||||||||||||||| ||||||| |||||||||| || ||||| ||||
Sbjct 1926 ATAGTCCTGATGAAACCGCATACTTCCGCATGTTGCTAAACCGGGAAAACATTTCAAATG 1985
Query 1892 CAACTGTCATGATCCAACCGTCAT-TGACAACATATTCATTCAATTCACCAGCC-GAACC 1949
||| ||||||||||||||| || | |||| ||||||||||||||||| | || | |
Sbjct 1986 CAATTGTCATGATCCAACCTTC-TCTGACGTCATATTCATTCAATTCAGGA-CCTCAGGC 2043
Query 1950 AGCTTTGCTAGATGTGGCTTCCATTGCAGCCGATCGA-ATTCTTTTATTAGATGCATATT 2008
||||||||| |||||||||||||||||||| || | | |||||| |||||||||||||||
Sbjct 2044 AGCTTTGCTGGATGTGGCTTCCATTGCAGCTGA-CAAGATTCTTCTATTAGATGCATATT 2102
Query 2009 TTAGTGTTGTTGTCTTCCATGGAATGACTATAGCACAATGGCGAAATATGGGTTATCATC 2068
|||||||||||||||||||||||||||||||| | ||||||||||| |||||||||||||
Sbjct 2103 TTAGTGTTGTTGTCTTCCATGGAATGACTATATCGCAATGGCGAAACATGGGTTATCATC 2162
Query 2069 ATCAGCCTGAACACCAGGCTTTTGCTGAGTTATTGCAAGCTCCTCAAGAGGATTCCCAGA 2128
||||||||||||| |||| |||||| |||||||||||||||| ||||||||||||||||
Sbjct 2163 ATCAGCCTGAACATGAGGCCTTTGCTCAGTTATTGCAAGCTCCGCAAGAGGATTCCCAGA 2222
Query 2129 TGCTAGTCCGTGAGCGTTTCCCTGTCCCAAGATTAGTTGTCTGTGATCAGCACGGCTCGC 2188
|| ||||||| ||||||||||| ||||| ||||||||||| |||||||| || || || |
Sbjct 2223 TGTTAGTCCGGGAGCGTTTCCCAGTCCCGAGATTAGTTGTGTGTGATCAACATGGATCAC 2282
Query 2189 AGGCAAGGTTTTTATTGGCAAAGCTGAATCCATCAGCGACGTACAACAATGCAAACGAAA 2248
||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| |
Sbjct 2283 AGGCAAGGTTTTTATTGGCTAAGCTGAATCCATCAGCGACTTACAACAATGCAAACGAGA 2342
Query 2249 TGTC-GACAGGGTCAGATGTGATATTCACAGACGACGTTAGCCTTCAAGTCTTCT-TTGA 2306
|||| | | |||||||| | || ||||| ||||| || ||||| |||||||| | ||||
Sbjct 2343 TGTCAG-CTGGGTCAGACATAATCTTCACTGACGATGTGAGCCTGCAAGTCTT-TATTGA 2400
Query 2307 ACATCTTCAGAAGCTGGTAGTGCAGTCTTGAG 2338
|||||||||||| |||| ||||| || ||||
Sbjct 2401 ACATCTTCAGAAACTGGCCGTGCAATCCTGAG 2432
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 124012683096
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5