BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg479893
Length=1712
Score E
Sequences producing significant alignments: (Bits) Value
AT3G23810.1 | Symbols: SAHH2, ATSAHH2 | S-adenosyl-l-homocystei... 2680 0.0
AT4G13940.1 | Symbols: HOG1, EMB1395, SAHH1, MEE58, ATSAHH1 | S... 1633 0.0
> AT3G23810.1 | Symbols: SAHH2, ATSAHH2 | S-adenosyl-l-homocysteine
(SAH) hydrolase 2 | chr3:8587664-8589713 REVERSE LENGTH=1849
Length=1849
Score = 2680 bits (1451), Expect = 0.0
Identities = 1624/1708 (95%), Gaps = 10/1708 (1%)
Strand=Plus/Plus
Query 1 TCCTTCATCACACAGATCCACAGATCAAAAAACTATTCAAAAATGGCTTTGCTTGTTGAG 60
|||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| |||
Sbjct 1 TCCTTCATCACACAGATCCACACATCAAGAAACTATTCAAAAATGGCTTTGCTTGTAGAG 60
Query 61 AAAACATCAAGTGGCCGTGAATACAAGGTCAAAGACATGTCTCAGGCCGACTTCGGCCGG 120
||||| |||||||||||||||||||||||||| |||||||| || ||||||||||||||
Sbjct 61 AAAACCTCAAGTGGCCGTGAATACAAGGTCAAGGACATGTCCCAAGCCGACTTCGGCCGT 120
Query 121 CTCGAAATCGAGCTAGCCGAAGTCGAAATGCCTGGACTTGTCTCTTGCCG-TACTGAATT 179
||||||||||||||||||||||||||||||||||||||||||||||| || ||| |||||
Sbjct 121 CTCGAAATCGAGCTAGCCGAAGTCGAAATGCCTGGACTTGTCTCTTG-CGTTACCGAATT 179
Query 180 CGGACCATCTCAGCCACTAAAAGGAGCAAGAATCACCGGATCACTCCACATGACGATTCA 239
|||||||||||||||||| |||||||||||||||||||| || |||||||||||||| ||
Sbjct 180 CGGACCATCTCAGCCACTCAAAGGAGCAAGAATCACCGGTTCTCTCCACATGACGATCCA 239
Query 240 AACCGCTGTTTTGATCGAAACGTTAACCGCTCTCGGCGCTGAAGTCAGATGGTGTTCTTG 299
|||||| ||||| |||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 240 AACCGCGGTTTTAATCGAAACCTTAACCGCTCTCGGCGCTGAAGTCAGATGGTGTTCTTG 299
Query 300 CAACATCTTCTCAACTCAAGATCACGCCGCGGCAGCGATTGCTCGTGATTCCGCCGCGGT 359
|||||||||||| |||||||| ||||||||||| || |||||||||||||||||||||||
Sbjct 300 CAACATCTTCTCCACTCAAGACCACGCCGCGGCCGCTATTGCTCGTGATTCCGCCGCGGT 359
Query 360 GTTCGCTTGGAAAGGTGAGACTCTTCAAGAATATTGGTGGTGTACGGAGAGAGCTCTTGA 419
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 360 GTTCGCTTGGAAAGGTGAGACTCTTCAAGAATATTGGTGGTGTACAGAGAGAGCTCTTGA 419
Query 420 TTGGGGTCCTGGTGGTGGTCCTGATCTTATCGTTGATGACGGTGGTGATGCTACGCTGTT 479
||||||||||| |||||||||||||| |||||||||||||||||||||||||| |||||
Sbjct 420 CTGGGGTCCTGGAGGTGGTCCTGATCTCATCGTTGATGACGGTGGTGATGCTACACTGTT 479
Query 480 GATCCATGAGGGTGTTAAAGCTGAAGAGATCTTTGAGAAGACTGGTACGTTCCCTGACCC 539
||||||||| || |||||||||||||||||||||| |||| ||||||||||||||||||
Sbjct 480 GATCCATGAAGGAGTTAAAGCTGAAGAGATCTTTGCCAAGAATGGTACGTTCCCTGACCC 539
Query 540 GACGTCTACGGATAATCCCGAGTTTCAGATCGTGTTGGCGATTATCAGAGACGGTCTTCA 599
||| ||||| ||||||||||||||||||||||| || | ||||||| ||||||||||||
Sbjct 540 GACCTCTACTGATAATCCCGAGTTTCAGATCGTCCTGTCTATTATCAAAGACGGTCTTCA 599
Query 600 AGTTGATCCCAAGAAGTACCATAAGATGAAGGAGAGATTGGTTGGTGTTTCTGAAGAGAC 659
|||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||
Sbjct 600 AGTTGATCCCAAGAAGTACCATAAGATGAAGGAGAGATTGGTTGGTGTCTCTGAGGAGAC 659
Query 660 TACCACTGGTGTTAAGAGGCTTTATCAGATGCAGGAGACTGGAACTCTCTTGTTCCCTGC 719
||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 660 TACTACTGGTGTTAAGAGGCTTTATCAGATGCAGGAGACTGGAGCTCTCTTGTTCCCTGC 719
Query 720 CATTAACGTCAATGACTCTGTCACCAAGAGCAAGTTTGACAACTTGTACGGATGCCGACA 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 720 CATTAACGTCAATGACTCTGTCACCAAGAGCAAGTTTGACAACTTGTACGGATGCCGACA 779
Query 780 CTCGCTACCTGATGGTCTCATGAGGGCTACTGATGTTATGATTGCTGGAAAGGTTGCTGT 839
|||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 780 CTCGCTTCCCGATGGTCTCATGAGGGCTACTGATGTTATGATTGCTGGAAAGGTTGCTGT 839
Query 840 TATCTGTGGTTATGGTGATGTAGGAAAAGGTTGTGCTGCAGCAATGAAAACCGCGGGTGC 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 840 TATCTGTGGTTATGGTGATGTAGGAAAAGGTTGTGCTGCAGCAATGAAAACCGCGGGTGC 899
Query 900 TCGTGTCATAGTGACTGAGATTGATCCAATCTGTGCTCTTCAGGCTCTTATGGAAGGTCT 959
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 900 TCGTGTCATAGTGACTGAGATTGATCCAATCTGTGCTCTTCAGGCTCTTATGGAAGGTCT 959
Query 960 TCAAGTTCTAACTCTTGAGGATGTTCT-TCCAGAAGCTGATATCTT-TGTGACCACTACT 1017
||||||||| || |||||||||||| | || ||||||||||||||| ||| |||||||||
Sbjct 960 TCAAGTTCTGACCCTTGAGGATGTTGTCTC-AGAAGCTGATATCTTCTGT-ACCACTACT 1017
Query 1018 GGTAACAAAGATATCATCATGGTTGACCACATGAGGAAGATGAAGAACAATGCCATTGTC 1077
|||||||||||||| || |||||||| |||||||||||||||||||||||||||||||||
Sbjct 1018 GGTAACAAAGATATTATTATGGTTGATCACATGAGGAAGATGAAGAACAATGCCATTGTC 1077
Query 1078 TGTAACATTGGTCATTTTGACAACGAAATCGACATGCTTGGACTTGAGACTTACCCTGGT 1137
||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||
Sbjct 1078 TGTAACATTGGTCATTTTGACAATGAAATCGACATGCTTGGACTTGAGACCTACCCTGGT 1137
Query 1138 GTGAAACGTATCACCATCAAGCCACAGACCGATAGGTGGGTGTTTCCAGACACCAAGTCT 1197
||||||||||| ||||||||||||||||||||||||||||||||||| || ||||| |||
Sbjct 1138 GTGAAACGTATTACCATCAAGCCACAGACCGATAGGTGGGTGTTTCCTGATACCAACTCT 1197
Query 1198 GGTATCATTGTTCTAGCTGAAGGTCGTTTGATGAACTTGGGATGCGCTACTGGACACCCG 1257
|| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1198 GGCATCATTGTTCTAGCTGAAGGTCGTTTGATGAACTTGGGATGCGCCACTGGACACCCG 1257
Query 1258 AGTTTCGTGATGTCGTGCTCATTCACCAACCAGGTGATTGCACAGCTTGAGCTCTGGAAC 1317
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1258 AGTTTCGTGATGTCGTGCTCATTCACCAACCAGGTGATTGCACAGCTTGAGCTCTGGAAC 1317
Query 1318 GAGAAGTCGAGCGGGAAGTATGAGAAGAAGGTGTATGTTTTGCCTAAACACTTGGATGAG 1377
|||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1318 GAGAAGTCAAGCGGGAAGTATGAGAAGAAGGTCTATGTTTTGCCTAAACACTTGGATGAG 1377
Query 1378 AAGGTAGCTGCACTTCACTTAGGTAAGCTCGGTGCAAGACTCACCAAGCTTACCAAGGAC 1437
||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||
Sbjct 1378 AAGGTAGCTGCACTTCACTTAGGCAAGCTTGGTGCAAGACTCACCAAGCTTACCAAGGAC 1437
Query 1438 CAATCTGACTATGTCAGCATACCTATTGAAGGTCCCTACAAGCCTGTTCATTACAGGTAC 1497
||||||||||||||||||||||| |||||||||| |||||||||||||| |||||||||
Sbjct 1438 CAATCTGACTATGTCAGCATACCCGTTGAAGGTCCTTACAAGCCTGTTCACTACAGGTAC 1497
Query 1498 TGAGAAGATAAAAGAGGCAAGCTTTGGTTCTTCGTATGGTTTTATGATTAAGCCGTTTAT 1557
||||| |||||||||| |||||||||||||||||| ||||||| ||||||||||||||||
Sbjct 1498 TGAGAGGATAAAAGAGCCAAGCTTTGGTTCTTCGTTTGGTTTTCTGATTAAGCCGTTTAT 1557
Query 1558 TGGCAATTTGTTTGAGTCGGGTTGGGTCTGGTCTGGTCG-AGGAAATATGAGATATTGGT 1616
|||||||| ||||||||||| ||||||||||| |||||| || |||||||||||||||||
Sbjct 1558 TGGCAATT-GTTTGAGTCGGATTGGGTCTGGTTTGGTCGGAG-AAATATGAGATATTGGT 1615
Query 1617 CCTCTGATGAGTGTGACCAAATATTGGTATGAATAAGGGGTTGTTTTTGATTTATGAGAG 1676
| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1616 CTTCTGATGCGTGTGACCAAATATTGGTATGAATAAGGGGTTGTTTTTGATTTATGAGAG 1675
Query 1677 GCTAttttttttGTTTTCTTCTTCTTCT 1704
||| ||||||| ||||||||||||||||
Sbjct 1676 GCTGTTTTTTT-GTTTTCTTCTTCTTCT 1702
> AT4G13940.1 | Symbols: HOG1, EMB1395, SAHH1, MEE58, ATSAHH1 |
S-adenosyl-L-homocysteine hydrolase | chr4:8054862-8057139
FORWARD LENGTH=1990
Length=1990
Score = 1633 bits (884), Expect = 0.0
Identities = 1282/1475 (87%), Gaps = 23/1475 (2%)
Strand=Plus/Plus
Query 43 ATGGCTTTGCTTGTTGAGAAAACATCAAGTGGCCGTGAATACAAGGTCAAAGACATGTCT 102
||||| ||||| || ||||| || ||||||||||||||||||||||||||||||||||||
Sbjct 70 ATGGCGTTGCTCGTCGAGAAGACCTCAAGTGGCCGTGAATACAAGGTCAAAGACATGTCT 129
Query 103 CAGGCCGACTTCGGCCGGCTCGAAATCGAGCTAGCCGAAGTCGAAATGCCTGGACTTGTC 162
|| ||||| ||||| || |||||| ||||||| |||||||| || ||||||||||| |
Sbjct 130 CAAGCCGATTTCGGTCGTCTCGAACTCGAGCTCGCCGAAGTTGAGATGCCTGGACTCATG 189
Query 163 TCTTGCCGTACTGAATTCGGACCATCTCAGCCACTAAAAGGAGCAAGAATCACCGGATCA 222
|||| ||||| ||||||||||| ||||||||| | ||||| || ||||||||||||||
Sbjct 190 GCTTGTCGTACCGAATTCGGACCTTCTCAGCCATTCAAAGGCGCTAGAATCACCGGATCT 249
Query 223 CTCCACATGACGATTCAAACCGCTGTTTTGATCGAAACGTTAACCGCTCTCGGCGCTGAA 282
|| |||||||| || |||||||| || | |||||||| |||| |||||||| ||||||
Sbjct 250 CTTCACATGACCATCCAAACCGCCGTACTCATCGAAACCCTAACTGCTCTCGGTGCTGAA 309
Query 283 GTCAGATGGTGTTCTTGCAACATCTTCTCAACTCAAGATCACGCCGCGGCAGCGATTGCT 342
|||||||||||||| ||||||||||| || |||||||| |||||||| ||||| || |||
Sbjct 310 GTCAGATGGTGTTCCTGCAACATCTTTTCCACTCAAGACCACGCCGCCGCAGCCATCGCT 369
Query 343 CGTGATTCCGCCGCGGTGTTCGCTTGGAAAGGTGAGACTCTTCAAGAATATTGGTGGTGT 402
||||| |||||||| || ||||| |||||||||||||||||||| || || |||||||||
Sbjct 370 CGTGACTCCGCCGCTGTTTTCGCCTGGAAAGGTGAGACTCTTCAGGAGTACTGGTGGTGT 429
Query 403 ACGGAGAGAGCTCTTGATTGGGGTCCTGGTGGTGGTCCTGATCTTATCGTTGATGACGGT 462
|| ||| | ||||| ||||||||||| ||||||||||||||||| || |||||||| |||
Sbjct 430 ACCGAGCGTGCTCTAGATTGGGGTCCAGGTGGTGGTCCTGATCTGATTGTTGATGATGGT 489
Query 463 GGTGATGCTACGCTGTTGATCCATGAGGGTGTTAAAGCTGAAGAGATCTTTGAGAAGACT 522
||||| ||||| || ||||| |||||||||||||||||||| ||||||||||||||||||
Sbjct 490 GGTGACGCTACTCTTTTGATTCATGAGGGTGTTAAAGCTGAGGAGATCTTTGAGAAGACT 549
Query 523 GGT-ACGTTCCCTGACCCGACGTCTACGGATAATCCC-GAGTTTCAGATCGTGTTGGCGA 580
||| | ||||| ||| || || ||||| ||||| ||| |||||||||||||||||| | |
Sbjct 550 GGTCAAGTTCC-TGATCCTACTTCTACTGATAA-CCCTGAGTTTCAGATCGTGTTGTCTA 607
Query 581 TTATCAGAG-ACGGTCTTCAAGTTGATCCCAAGAAGTACCATAAGATGAAGGAGAGA-TT 638
|||||| || | ||||||||||||||||| ||||||||||| ||||||||||||||| ||
Sbjct 608 TTATCA-AGGAAGGTCTTCAAGTTGATCCTAAGAAGTACCACAAGATGAAGGAGAGACTT 666
Query 639 GGTTGGTGTTTCTGAAGAGACTACCACTGGTGTTAAGAGGCTTTATCAGATGCAGGAGAC 698
| ||||||| ||||| || |||||||||||||||||||||||||| ||||||||| | |
Sbjct 667 G-TTGGTGTCTCTGAGGAAACTACCACTGGTGTTAAGAGGCTTTACCAGATGCAGCAAAA 725
Query 699 TGGAACTCTCTTGTTCCCTGCCATTAACGTCAATGACTCTGTCACCAAGAGCAAGTTTGA 758
||||||||| |||||||||||||||||||| || ||||||||||||||||||||||| ||
Sbjct 726 TGGAACTCTTTTGTTCCCTGCCATTAACGTTAACGACTCTGTCACCAAGAGCAAGTTCGA 785
Query 759 CAACTTGTACGGATGCCGACACTCGCTACCTGATGGTCTCATGAGGGCTACTGATGTTAT 818
||||||||| || ||||| ||||| || |||||||||||||||||||| |||||||| ||
Sbjct 786 CAACTTGTATGGTTGCCGTCACTCACTCCCTGATGGTCTCATGAGGGCCACTGATGTCAT 845
Query 819 GATTGCTGGAAAGGTTGCTGTTATCTGTGGTTATGGTGATGTAGGAAAAGGTTGTGCTGC 878
||| |||||||||||||||||||||||||| ||||||||||| ||||| |||||||||||
Sbjct 846 GATCGCTGGAAAGGTTGCTGTTATCTGTGGATATGGTGATGTTGGAAAGGGTTGTGCTGC 905
Query 879 AGCAATGAAAACCGCGGGTGCTCGTGTCATAGTGACTGAGATTGATCCAATCTGTGCTCT 938
|| ||||| || || |||||| | ||||| ||||||||||||||||| |||||||| ||
Sbjct 906 TGCCATGAAGACTGCTGGTGCTAGAGTCATTGTGACTGAGATTGATCCCATCTGTGCCCT 965
Query 939 TCAGGCTCTT-ATGGAAGGTCTTCAAGTTCTAACTCTTGAGGATGTTCT-TCCAGAAGCT 996
||| ||| || |||||||| ||||| ||||| || |||||||||||| | || |||||||
Sbjct 966 TCAAGCT-TTGATGGAAGGACTTCAGGTTCTTACCCTTGAGGATGTTGTCTC-AGAAGCT 1023
Query 997 GATATCTTTGTGACCACTACTGGTAACAAAGATATCATCATGGTTGACCACATGAGGAAG 1056
||||||||||| ||||| || ||||||||||| ||||||||||| |||||||||||||||
Sbjct 1024 GATATCTTTGTCACCACCACCGGTAACAAAGACATCATCATGGTCGACCACATGAGGAAG 1083
Query 1057 ATGAAGAACAATGCCATTGTCTGTAACATTGGTCATTTTGACAACGAAATCGACATGCTT 1116
||||||||||| || ||||| || ||||||||||| |||||||| || || |||||||||
Sbjct 1084 ATGAAGAACAACGCTATTGTGTGCAACATTGGTCACTTTGACAATGAGATTGACATGCTT 1143
Query 1117 GGACTTGAGACTTACCCTGGTGTGAAACGTATCACCATCAAGCCACAGACCGATAGGTGG 1176
|||||||||||||||||||||||||| ||||||||||||||||||||||| || ||||||
Sbjct 1144 GGACTTGAGACTTACCCTGGTGTGAAGCGTATCACCATCAAGCCACAGACTGACAGGTGG 1203
Query 1177 GTGTTTCCAGACACCAAGTCTGGTATCATTGTTCTAG-CTGAAGGTCGTTTGATGAACTT 1235
||||| ||||| |||||| |||| |||||||| || | |||| |||||| ||||||||||
Sbjct 1204 GTGTTCCCAGAGACCAAGGCTGGAATCATTGT-CTTGGCTGAGGGTCGTCTGATGAACTT 1262
Query 1236 GGGATGCGCTACTGGACACCCGAGTTTCGTGATGTCGTGCTCATTCACCAACCAGGTGAT 1295
||| || || ||||| ||||| |||||||||||||| ||||| |||||||||||||||||
Sbjct 1263 GGGTTGTGCCACTGGTCACCCAAGTTTCGTGATGTCTTGCTCTTTCACCAACCAGGTGAT 1322
Query 1296 TGCACAGCTTGAGCTCTGGAACGAGAA-GTCGAGCGGGAAGTATGAGAAGAAGGTGTATG 1354
||| ||||| ||||||||||||||||| | | ||||| ||||| |||||||||||||| |
Sbjct 1323 TGCCCAGCTCGAGCTCTGGAACGAGAAAG-CAAGCGGAAAGTACGAGAAGAAGGTGTACG 1381
Query 1355 TT-TTGCCTAAACACTTGGATGAGAAGGTAGC-TGCACTTCACTTAGGTAAGCTCGGTGC 1412
|| || || || || |||||||||||||| || | ||||||||| || ||||| || ||
Sbjct 1382 TTCTTCCC-AAGCATTTGGATGAGAAGGTTGCATT-ACTTCACTTGGGCAAGCTTGGAGC 1439
Query 1413 AAGACTCACCAAGCT-TACCAAGGACCAATCTGACTATGTCAGCATACCTATTGAAGGTC 1471
|| || || ||||| | | ||||||||||||||||| |||||||| || ||||| || |
Sbjct 1440 CAGGCTTACAAAGCTGT-CAAAGGACCAATCTGACTACGTCAGCATTCCAATTGAGGGAC 1498
Query 1472 CCTACAAGCCTGTTCATTACAGGTACTGAGA-AGA 1505
| ||||||||| ||| |||||||||||||| |||
Sbjct 1499 CATACAAGCCTCCTCACTACAGGTACTGAGAGAGA 1533
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 84638118870
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5