BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg479954 Length=709 Score E Sequences producing significant alignments: (Bits) Value AT3G24450.1 | Symbols: | Heavy metal transport/detoxification ... 917 0.0 > AT3G24450.1 | Symbols: | Heavy metal transport/detoxification superfamily protein | chr3:8880065-8881722 REVERSE LENGTH=755 Length=755 Score = 917 bits (496), Expect = 0.0 Identities = 604/651 (93%), Gaps = 27/651 (4%) Strand=Plus/Plus Query 1 ATTTCTCTCACATATTCTCTCCTTTCTCACCCAACTTCTCCTTTTTATTAG---T----- 52 |||||||| |||||||||||| ||||||||||||||||||||||||||||| | Sbjct 1 ATTTCTCTTACATATTCTCTCATTTCTCACCCAACTTCTCCTTTTTATTAGTCTTCCCAA 60 Query 53 C-T--TCCCAAGATCACACTCTCTAAAAACCCTTAATTACTTTTTCAAACTAATGGGGAA 109 | | |||||| |||||||||||| |||||||||||||| ||||||||| |||||| || Sbjct 61 CATCATCCCAATATCACACTCTCTTAAAACCCTTAATTA-GTTTTCAAACCAATGGGAAA 119 Query 110 GCTCCAGAAAATTGGGAGAGTATGGGATTGtttttttCTTCCGACAAATCAGTGTTCATG 169 ||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 120 GCTCCAGAAGATTGGGAGAGTATGGGATTGTCTTTTTCTTCCGACAAATCAGTGTTCATG 179 Query 170 TTTTTGTCTAAACACTCTAGGAGATGATGAAGAAGAAGTGTTTGAG-AAGAAGCCATTGA 228 ||||||||||||||||||| | || ||||||||||||| ||||||| ||| ||||||||| Sbjct 180 TTTTTGTCTAAACACTCTA-G-GA-GATGAAGAAGAAGAGTTTGAGAAAG-AGCCATTGA 235 Query 229 TAGATTCTTCAGCAGAGAAATCTGGGAAGGTCATGAGATTAAAAGATGTTGTAGCTGCTG 288 ||||||||||| |||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct 236 TAGATTCTTCAACAGAGAAATCTGGGAAAGTCATGAGGTTAAAAGATGTTGTAGCTGCTG 295 Query 289 ATCATCGCCAGACTCTTGCCTTTCATCTTAAGCCTAAGATAGTGGAGCTAAAGGTGTCAA 348 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 296 ATCATCGTCAGACTCTTGCCTTTCATCTTAAGCCTAAGATAGTGGAGCTAAAGGTGTCAA 355 Query 349 TGCATTGCTACGGATGTGCGAAGAAAGTCGAGAAGCATATTTCTAAATTAGACGGAGTGA 408 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 356 TGCATTGCTACGGATGTGCGAAGAAAGTCGAGAAGCATATTTCTAAATTAGACGGAGTGA 415 Query 409 CATGGTACAAAGTGGAGCTAGAGAGCAAGAAGGTGGTGGTGAAGGGGAACATAATGCCAG 468 ||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||| | Sbjct 416 CATGGTACAAAGTGGAGCTAGAGAGCAAGAAGGTGGTGGTGAAAGGGAACATATTGCCGG 475 Query 469 TAGATGTGTTAGAGAGTATTTGTAAAGTCAAGAATGCTCAGCTTTGGTCTTCTTCTTCTT 528 ||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||| Sbjct 476 TAGATGTGTTAGAGAGTATTTGTAAAGTCAAGAATGCTCAGCTTTGGTCTTCT-C--CTT 532 Query 529 GAATCACTCTTT-CTTTCCACATGGGCCTTTCATGTCAATCTACATCTT-CATGTCAATC 586 |||||||||||| ||||||||||||||||||||||||||||| |||||| ||||| | Sbjct 533 GAATCACTCTTTTCTTTCCACATGGGCCTTTCATGTCAATCTCCATCTTTCATGT---T- 588 Query 587 AATATTATTATCATTATCTAATTATGCGTACATACACATGCATGCATCTAT 637 | ||||||| ||||||||||||| ||||||||||||||||||||||||||| Sbjct 589 A-TATTATTGTCATTATCTAATTTTGCGTACATACACATGCATGCATCTAT 638 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 34360156548 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5