BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg479968 Length=2142 Score E Sequences producing significant alignments: (Bits) Value AT3G24560.2 | Symbols: RSY3 | Adenine nucleotide alpha hydrolas... 2990 0.0 AT3G24570.1 | Symbols: | Peroxisomal membrane 22 kDa (Mpv17/PM... 148 2e-34 > AT3G24560.2 | Symbols: RSY3 | Adenine nucleotide alpha hydrolases-like superfamily protein | chr3:8963770-8966616 FORWARD LENGTH=2123 Length=2123 Score = 2990 bits (1619), Expect = 0.0 Identities = 1981/2152 (92%), Gaps = 39/2152 (2%) Strand=Plus/Plus Query 1 GAGTTCGCTCGTTCGTAAATGGCGCGAGGTCTGTCTCTATGCTCCAATGGAAGAAAGTCT 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 GAGTTCGCTCGTTCGTAAATGGCGCGAGGTCTGTCTCTATGCTCCAATGGAAGAAAGTCT 60 Query 61 TCGACTTTACTCTCAATCTCCATCCCTAGGGTTTCATTTTCCTTTTCTCCGAAAACCCTT 120 |||||||||||||||| ||||||||||||||||||| ||||||||||||| ||||||||| Sbjct 61 TCGACTTTACTCTCAAACTCCATCCCTAGGGTTTCAATTTCCTTTTCTCCTAAAACCCTT 120 Query 121 TTCACGTCTTCATATCCACATCAATCTCGCCACCCAAAATTCT--C-ACGATTGTTCTGT 177 ||||| | ||||||||||| |||||| |||||||||||||||| | ||||||||||||| Sbjct 121 TTCACTTGTTCATATCCACTTCAATCCCGCCACCCAAAATTCTCACAACGATTGTTCTGT 180 Query 178 AACCACGCATGTGTTCCC-GAGACGGTGGACGAAACGAAGTATAAAGAGCTTTTCAATAA 236 || ||||| |||| |||| ||||| ||||||||||||| ||| || |||||||||||||| Sbjct 181 AATCACGCCTGTG-TCCCGGAGACTGTGGACGAAACGAGGTACAAGGAGCTTTTCAATAA 239 Query 237 AAGAATGGCTATGGCAGGACTTAAACCTCACCACCGAATTGCTTTGGGAGTTTCAGGTGG 296 ||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 240 GAGAATGGATATGGCAGGACTTAAACCTCACAACCGAATTGCTTTGGGAGTTTCAGGTGG 299 Query 297 TCCTGATAGTATGGCTCTTTGTGTTCTAACTGCAAAATGGAAAACTGAAGGATTAAGTTG 356 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 300 TCCTGATAGTATGGCTCTTTGTGTTCTAACTGCAAAATGGAAAACTGAAGGATTAAGTTG 359 Query 357 TGTCAATAAGTCAGATGGTTTCATTGATGGACTTGTCGCTATAGTTGTGGATCATGGATT 416 ||| |||||| |||||||||| |||||||||||||| ||||||||||| ||||||||||| Sbjct 360 TGTTAATAAGACAGATGGTTTTATTGATGGACTTGTTGCTATAGTTGTTGATCATGGATT 419 Query 417 AAGACAAGAGAGTAAAGATGAAGCTGAACTTGTCTGTTCTAGAGTTTCTCAAATGGGTAT 476 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 420 AAGACAAGAGAGTAAAGATGAAGCTGAACTTGTCTGTTCTAGAGTTTCTCAAATGGGAAT 479 Query 477 TAGATGTGAGATTGCAAGTTGTGATTGGGTTGATGGTAGACCAAAGCTTGGTCACTTGCA 536 |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 480 CAGATGTGAGATTGCAAGTTGTGATTGGGTTGATGGTAGACCAAAGCTTGGCCACTTGCA 539 Query 537 AGAAGCAGCTCGTGAAATGAGGTATCAGATGATTTCGAATGTTTGTTTTCGACATCAGAT 596 ||||||||||||||||||||||||| |||||||||||||||| ||||||||||| ||||| Sbjct 540 AGAAGCAGCTCGTGAAATGAGGTATGAGATGATTTCGAATGTGTGTTTTCGACAACAGAT 599 Query 597 TGAGGTCTTACTTATAGCTCATCATGCCGATGACCAGGCTGAGTTATTCATTCTCAGGTT 656 ||||||||| |||||||| |||||||| |||||||||||||||||||||||||||||||| Sbjct 600 TGAGGTCTTGCTTATAGCGCATCATGCAGATGACCAGGCTGAGTTATTCATTCTCAGGTT 659 Query 657 ATCTCGTAGTAGCGGTGTACTTGGTCTTGCAGGTACAGCTTTTGCTTCCGAGATTTTCTC 716 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 660 ATCTCGTAGTAGCGGTGTACTTGGTCTTGCGGGTACAGCTTTTGCTTCCGAGATTTTCTC 719 Query 717 CAGAAATCTGCAGTTAGATGCAAAACATATGAAGAACCGATCTATTCTCTTAGTGCGTCC 776 |||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||| Sbjct 720 CAGAAATCTGCAGTTAGATGCAAAACATATGAAGAACCAATCTATTCGCTTAGTGCGTCC 779 Query 777 GCTATTAGAATTATGGAAAGAAGACATGTATAAGATATGTCAATGGGGTAGACAAGATTG 836 |||| |||| |||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 780 GCTACTAGATTTATGGAAAGAAGACATGTACAAGATATGTCAATGGGGTAGACAAGATTG 839 Query 837 GGTTGAAGATCCGACTAATCGTAGTCAATTGTTTGTCCGGAACAGGATTCGAACGTCAAT 896 |||||||||||| |||||||||||||| |||||||| ||||| ||||||||||| ||||| Sbjct 840 GGTTGAAGATCCAACTAATCGTAGTCAGTTGTTTGTTCGGAATAGGATTCGAACATCAAT 899 Query 897 AGGAAATCTACATTCAGGCAACTTCAAGTCAGAGCTTCATGCAGTCATTTCTGAATGCCG 956 |||||||||| | ||||| | ||||||||||||||| || |||||||||||||||||| | Sbjct 900 AGGAAATCTAGAATCAGGTAGCTTCAAGTCAGAGCTGCAAGCAGTCATTTCTGAATGCAG 959 Query 957 AAGAACACGGTCATTTGTTGATAAAGTTTGTACAGACTTAATA-AGTCAGACCGTAACAG 1015 |||||||| ||||||||||||||||||||||||||||||||| | |||||||||||||| Sbjct 960 GAGAACACGTTCATTTGTTGATAAAGTTTGTACAGACTTAATACA-TCAGACCGTAACAG 1018 Query 1016 TGACAGATAAAGGGTATGCTATTCTTGATCTAGAGAGACTAAATCCTACAGAAGTTAAAG 1075 |||||||||||||||||||||||||||||||||||||||| |||||| ||| |||||||| Sbjct 1019 TGACAGATAAAGGGTATGCTATTCTTGATCTAGAGAGACTTAATCCTTCAGGAGTTAAAG 1078 Query 1076 ACATTTGCCTCTCAAAGTATCTCGCTGCAGTCTTGCAGTTTATCTCTCAACGGCACAGAC 1135 ||||||||||||||||||||||| ||| ||| |||||||||||||||||||||| |||| Sbjct 1079 ACATTTGCCTCTCAAAGTATCTCTTTGCGGTCCTGCAGTTTATCTCTCAACGGCAAAGAC 1138 Query 1136 CAGTCAGAGGAAACACTTCAAAGTTGCTTTTGAACTATATCCGCGCAATTCCGTGCAGGA 1195 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1139 CAATCAGAGGAAACACTTCAAAGTTGCTTTTGAACTATATCCGCGCAATTCCGTGCAGGA 1198 Query 1196 CATCTCTAACAGCTGCTGGTTGCTACCTTAGTCCCGCTCCTGGGTCCAAGGGTACCAAAA 1255 |||||||||||||||||||||||||||||||||| ||||| ||||| ||||||||||||| Sbjct 1199 CATCTCTAACAGCTGCTGGTTGCTACCTTAGTCCTGCTCCAGGGTCGAAGGGTACCAAAA 1258 Query 1256 TTATAGTTTCCTGTTCTGTTGACTGTCCTTTACCATCAAAGACAGAACTCTTGAACATTT 1315 ||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1259 TTATAGTCTCATGTTCTGTTGACTGTCCTTTACCATCAAAGACAGAACTCTTGAACATTT 1318 Query 1316 GCGTCAATGAAGCTCAGAAAAAACCGACTTCTGATGACCTCAGTA-AAATCATATCAGAC 1374 | |||||||| ||| | | | |||||||||| | | |||||||| ||||| Sbjct 1319 CCTTCAATGAAACTC--------C--A-T-CTGATGACCTTGG-ACAAATCATAGCAGAC 1365 Query 1375 GCAACATC-TATTTCAGACCATGAGGCCCCGAGCAAATTGTTTGAAGTCCATTTTTTGGT 1433 |||| ||| | |||| ||||||| ||| || | || |||||||||||||| ||| ||| Sbjct 1366 GCAAAATCGT-TTTCTGACCATGTGGCTCCAACCAGCTTGTTTGAAGTCCAGTTTCTGGA 1424 Query 1434 TGTTGCTTCTGAATCCGTTTTGAGTAAAGCCAGAGAGCTCAATCTTCTCAGCGAATCTAC 1493 |||||| ||||||||||| |||||||||||||||||||||||||||||||||||||| || Sbjct 1425 TGTTGCATCTGAATCCGTATTGAGTAAAGCCAGAGAGCTCAATCTTCTCAGCGAATCGAC 1484 Query 1494 CTATACAACCATTGGTCTACTGCAAAGGAATGAAACCAATCGGTTCATAACTAAAACAGA 1553 ||||||||||||||||||||||| ||| ||||||| || ||||| ||||||||||||| Sbjct 1485 GTATACAACCATTGGTCTACTGCAGAGGGATGAAACTAAACGGTTTTTAACTAAAACAGA 1544 Query 1554 TGACAAATCTGTAGATGAATCT-GAGCATGGAACCAACATTGCATCTTCCTCTGATAAAG 1612 || ||||| || | |||| | ||||||||||||||||||||| ||||||||||||||| Sbjct 1545 AGAGAAATCAGT-G--GAAT-TAGAGCATGGAACCAACATTGCAGCTTCCTCTGATAAAG 1600 Query 1613 TACATCTTTGGCCAGGGCAAAATCTCTACTTCATGAACCGGTTTCTCATCAGATGGAACT 1672 |||||||||| | ||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 1601 TACATCTTTGTCTAGGGCAAAATCTCTACTTCATGAACCGTTTTCTCATCAGATGGAACC 1660 Query 1673 TGAGTGACCACCAATGTGATGAAGCTGGCTGCGGAAATTGTCCAGTGAGGACAGCTACAT 1732 | ||||||||||||||| ||||||| | |||| |||||||||||||||| || ||||||| Sbjct 1661 TAAGTGACCACCAATGTAATGAAGCAGACTGCAGAAATTGTCCAGTGAGTACTGCTACAT 1720 Query 1733 CAATGGAGGTTCGGCACATGGTTGAATCCGACTGGCTATATCTAGCTGAGCTTTCAAAAT 1792 |||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||| Sbjct 1721 CAATGGAGGTTCGGCACATGGTTGAACCCGACTGGTTATATCTAGCTGAGCTTTCAAAAT 1780 Query 1793 GCTCGAAC-TCAAACCATTCTATGTCATCCTCACAAAAAGCTCTCAGGTCCTTAAAGTTG 1851 |||| ||| ||||| |||||||| |||||||||||||||||||||||||||||||||||| Sbjct 1781 GCTC-AACCTCAAATCATTCTATTTCATCCTCACAAAAAGCTCTCAGGTCCTTAAAGTTG 1839 Query 1852 ATCCCAGCTGCTGCAAGAAAAAGCCTCCCGGTCTTGATCAATCATTGCGGATTACTACTC 1911 |||||||| ||||||||||||||||| || |||||| ||||||| || |||||||||||| Sbjct 1840 ATCCCAGCCGCTGCAAGAAAAAGCCTTCCTGTCTTGGTCAATCACTGTGGATTACTACTC 1899 Query 1912 AGTGTTCCCGCTATTGGCTTCAACTATTGTCCATGCCTTGAGACATCTGCAGTGTTTCTT 1971 | | || ||||||||||||| |||||| ||||||||||| ||||||||||||||||| Sbjct 1900 TGCATACCAGCTATTGGCTTCAGTTATTGTTCATGCCTTGAGGCATCTGCAGTGTTTCTT 1959 Query 1972 CCAAGAGTACCACTCGGAGGTGGTCATAGCTCATTTCTCTAGTCTAGCCATATCCTGTTT 2031 |||||| ||||||||||||| ||||||||||||||||||||||||||||||||| |||| Sbjct 1960 CCAAGAATACCACTCGGAGGCGGTCATAGCTCATTTCTCTAGTCTAGCCATATCATGTTG 2019 Query 2032 CATTCATTCAATATTTCAATTCTAACAGACATTTATTCACTTGTACTGAATTCTTGTGAA 2091 ||||||||||||| | | ||||||||||||||||||||||||||||||| ||||| Sbjct 2020 CATTCATTCAATA---C--T---AACAGACATTTATTCACTTGTACTGAATTCTCGTGAA 2071 Query 2092 ACAAAATAATATTTGAT-CAAGAATCTGTATCCTAGGCAACTTTCGTTATTG 2142 || |||||||||||||| ||||||||||||||||||||||||| |||||||| Sbjct 2072 ACGAAATAATATTTGATTCAAGAATCTGTATCCTAGGCAACTTCCGTTATTG 2123 > AT3G24570.1 | Symbols: | Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein | chr3:8966521-8968657 REVERSE LENGTH=989 Length=989 Score = 148 bits (80), Expect = 2e-34 Identities = 91/96 (95%), Gaps = 1/96 (1%) Strand=Plus/Minus Query 2048 CAATTCTAACAGACATTTATTCACTTGTACTGAATTCTTGTGAAACAAAATAATATTTGA 2107 |||| ||||||||||||||||||||||||||||||||| ||||||| ||||||||||||| Sbjct 989 CAATACTAACAGACATTTATTCACTTGTACTGAATTCTCGTGAAACGAAATAATATTTGA 930 Query 2108 T-CAAGAATCTGTATCCTAGGCAACTTTCGTTATTG 2142 | ||||||||||||||||||||||||| |||||||| Sbjct 929 TTCAAGAATCTGTATCCTAGGCAACTTCCGTTATTG 894 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 106224353220 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5