BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg479981
Length=2625
Score E
Sequences producing significant alignments: (Bits) Value
AT5G58870.1 | Symbols: ftsh9 | FTSH protease 9 | chr5:23769811-... 2870 0.0
AT3G47060.1 | Symbols: ftsh7 | FTSH protease 7 | chr3:17332985-... 1616 0.0
> AT5G58870.1 | Symbols: ftsh9 | FTSH protease 9 | chr5:23769811-23773780
REVERSE LENGTH=2751
Length=2751
Score = 2870 bits (1554), Expect = 0.0
Identities = 1752/1844 (95%), Gaps = 27/1844 (1%)
Strand=Plus/Plus
Query 1 AAATGTGTTTCAATGTCTTCCTTTGATTTCCTCAATTTCTAGGGTTTCGAAAG-AAAAAT 59
||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1 AAATGTGTTGCAATGTCTTCCTTTGATTTCCTCAATTTCTAGGGTTTCGAAAGAAAAAAT 60
Query 60 AATGACTTCAATCGAATTGCTATGTCCATTGATTCACGATAAGTTTCGATTCTCAGCTTG 119
|||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||
Sbjct 61 AATGACTTCAATCGAATTGCTAAGTCCATTGATTCACGATAAGTTTCGATTCTCAACTTG 120
Query 120 TTGTAGTACTAGTAGTTTATTGTATTTGCATGCTTCTAGCTTTTTCCGAGATCGGTCTTT 179
|||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||
Sbjct 121 TTGTAGTACTAGTAGTTTATTGTATTTGCATGCTTCGAGCTTTTTCCGAGATCGATCTTT 180
Query 180 TGGTTTTCGTCAGAATCCGAATCGATTTGTCTCCAATTCA---ATTCAACTTCCTCAATC 236
||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||
Sbjct 181 TGGTTTTCGTCAGAATCCGAATCGATTCGTCTCCAATTCATCGATTCAACTTCCTCAATC 240
Query 237 AGTTACAGGGTCGATAAACCATGAAAGGTTCAATCTTTGGCAAGGGTTTTCGAGGAAGAA 296
|||| |||||||||||||||| |||||||| |||||||||||||||||||||||||||||
Sbjct 241 AGTTCCAGGGTCGATAAACCAGGAAAGGTTTAATCTTTGGCAAGGGTTTTCGAGGAAGAA 300
Query 297 GAGTAC---TAGTAGTAGAACGATTGTGAATTGTCAAGAAGGTGATCAGAAAGCTAGCTC 353
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 301 GAGTACTAGTAGTAGTAGAACGATTGTGAATTGTCAAGAAGGTGATCAGAAAGCTAGCTC 360
Query 354 AAGTGAAGGAGAAGGAAAGACAAATTCGAATTCGTCGAAGCAGAAAGGA-GGTAAGCAAG 412
||||||||||||||||||||| | || | ||| | |||||| || |||||||
Sbjct 361 AAGTGAAGGAGAAGGAAAGAC-----C-AA----T--AAGGATAAAGGACGG-AAGCAAG 407
Query 413 GTAAGAATGGGTTATGGTGGTCTAAAGGGAAGAAATGGCAGTGGGAACCGATTATTCAAG 472
||||||||| |||||||||||||||||||||||||||||| ||| ||||||| |||||||
Sbjct 408 GTAAGAATGAGTTATGGTGGTCTAAAGGGAAGAAATGGCAATGGAAACCGATAATTCAAG 467
Query 473 CGCAGGAGATTGGTGTTTTATTACTACAATTGGGTATTGTTATGTTTGTGGTGCGATTGC 532
|||||||||||||||| | ||||||||||||||||||||||||||||| ||||||||||
Sbjct 468 CGCAGGAGATTGGTGTAATGTTACTACAATTGGGTATTGTTATGTTTGTTGTGCGATTGC 527
Query 533 TTCGACCTGGAATCCCGTTACCGGGTTCGGAGCCTCGCACACAGACGACGTTTATGAGTG 592
| ||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 528 TCCGACCCGGAATCCCGTTACCGGGTTCGGAGCCTCGGACACAGACGACGTTTATGAGTG 587
Query 593 TACCGTATAGTGATTTCTTGAGTAAAGTTAACAATGATGAGGTTCAGAAAGTGGAGGTAG 652
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
Sbjct 588 TACCGTATAGTGATTTCTTGAGTAAAGTTAATAATGATGAGGTTCAGAAAGTGGAGGTGG 647
Query 653 ATGGTGTTCATGTTTTGTTTAAGTTGAAAGATGATGGGAATTTGCAAGAGAGTGAAACTA 712
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 648 ATGGTTTTCATGTTTTGTTTAAGTTGAAAGATGATGGGAATTTGCAAGAGAGTGAAACTA 707
Query 713 GT-G--GTAG---TAAGCTTTCTGAGTCGTCTGAGACTATGCTTAGAAGTGTGGCTCCGA 766
|| | |||| |||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 708 GTAGTAGTAGTATTAAGCTCTCTGAGTCGTCTGAGACTATGCTTAGAAGTGTGGCTCCGA 767
Query 767 CTAAAAGGGTTGTATATTCCACCACAAGGCCGAGGGATATTAAAACGCCGTACGAGAAAA 826
||||||| ||||| |||||||| || |||||||||||||| ||||| ||||| |||||||
Sbjct 768 CTAAAAGAGTTGTGTATTCCACTACTAGGCCGAGGGATATCAAAACACCGTATGAGAAAA 827
Query 827 TGCTTGAGAATAATGTGGAATTCGGGTCGCCTGATAAGCGCTCTGGTGGCTTTTTCAACT 886
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 828 TGCTTGAGAATAATGTGGAATTCGGGTCGCCTGATAAGCGCTCTGGTGGCTTTTTCAACT 887
Query 887 CTGGATTGATAGTTCTATTCTACATTGCAGTGCTTGCAGGGCTTCTCCACCGATTTCCTG 946
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 888 CTGGATTGATAGTTCTGTTCTACATTGCAGTGCTTGCAGGGCTTCTCCACCGATTTCCTG 947
Query 947 TTAACTTTTCCCAGAGTACAACGGGACAACTGAGGACACGCAAGTCTGGTGGTCCTGGTG 1006
|||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||
Sbjct 948 TTAACTTTTCCCAGAGTACAACGGGACAGCTGAGGACCCGCAAGTCTGGTGGTCCTGGTG 1007
Query 1007 GGGGGAAAGTTTCTGGTGAAGGTGAAACAATCACTTTTGCAGATGTTGCTGGTGTTGATG 1066
|||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1008 GGGGAAAAGTTTCTGGTGATGGTGAAACAATCACTTTTGCAGATGTTGCTGGTGTTGATG 1067
Query 1067 AAGCAAAGGAAGAGCTGGAAGAGATTGTGGAATTTCTCAAGAATCCTGATAGGTATGTCC 1126
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 1068 AAGCAAAGGAAGAGCTGGAAGAGATTGTGGAATTTCTCAAGAATCCTGATAGGTATGTTC 1127
Query 1127 GTCTAGGTGCTCGTCCCCCTCGTGGTGTCTTATTGGTCGGTCTCCCTGGAACAGGGAAAA 1186
|||||||||||||||| |||||||||||| || |||||||||| ||||||||||||||||
Sbjct 1128 GTCTAGGTGCTCGTCCTCCTCGTGGTGTCCTACTGGTCGGTCTTCCTGGAACAGGGAAAA 1187
Query 1187 CCCTTCTTGCAAAAGCTGTTGCTGGGGAATCTGATGTCCCCTTCATAAGTTGCTCTGCAA 1246
||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||
Sbjct 1188 CCCTTCTTGCAAAAGCTGTTGCTGGGGAATCTGATGTTCCATTCATAAGTTGCTCTGCAA 1247
Query 1247 GTGAGTTTGTAGAGCTGTATGTTGGCATGGGTGCTTCACGCGTAAGGGATCTTTTTGCAC 1306
|||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||
Sbjct 1248 GTGAGTTTGTAGAGCTGTATGTTGGCATGGGTGCCTCACGCGTAAGGGATCTATTTGCAC 1307
Query 1307 GGGCCAAGAAGGAGGCTCCGTCAATTATATTTATAGATGAGATAGATGCTGTCGCGAAAA 1366
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1308 GAGCCAAGAAGGAGGCTCCGTCAATTATATTTATAGATGAGATAGATGCTGTCGCGAAAA 1367
Query 1367 GCCGTGATGGTAAATTCAGAATGGTCAGCAATGATGAAAGAGAGCAAACTTTGAATCAGT 1426
|||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| |
Sbjct 1368 GCCGTGATGGTAAATTCAGAATGGTCAGCAATGATGAAAGGGAGCAAACCTTGAATCAAT 1427
Query 1427 TGCTCACTGAGATGGATGGTTTTGACAGTAGCTCAGCAGTTATTGTTCTTGGAGCTACCA 1486
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 1428 TGCTCACTGAGATGGATGGTTTTGACAGTAGCTCTGCAGTTATTGTTCTTGGAGCTACCA 1487
Query 1487 ATCGAGCTGATGTCTTAGACCCCGCCCTGCGTCGGCCTGGGAGATTTGATCGTGTTGTTA 1546
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1488 ATCGAGCTGATGTCTTAGACCCTGCCCTGCGTCGGCCTGGGAGATTTGATCGTGTTGTTA 1547
Query 1547 CGGTGGAATCACCTGACAAAGTTGGAAGAGAATCCATATTGAAAGTGCATGTTTCAAAGA 1606
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 1548 CGGTGGAATCACCTGACAAAGTTGGAAGAGAATCCATTTTGAAAGTGCATGTTTCAAAGA 1607
Query 1607 AAGAGCTTCCTTTGGGAAATGATGTCAACCTAGCTAGTAGTGCCTCAATGACAACCGGTT 1666
||||||||||||||||| ||||||||||||||||||| | ||||||||||||||||||||
Sbjct 1608 AAGAGCTTCCTTTGGGAGATGATGTCAACCTAGCTAGCATTGCCTCAATGACAACCGGTT 1667
Query 1667 TTACTGGGGCAGACCTTGCGAACCTAGTTAATGAGGCTGCTTTACTAGCGGGAAGGAAGA 1726
||||||||||||||||||| ||||| ||||||||||||||||| ||||||||||||||||
Sbjct 1668 TTACTGGGGCAGACCTTGCAAACCTGGTTAATGAGGCTGCTTTGCTAGCGGGAAGGAAGA 1727
Query 1727 GCAAGATGACTGTTGAAAAAATTGACTTCATTCAGGCTGTCGAGCGATCTATAGCGGGCA 1786
|||||||||||||||| || |||||||||||||| |||||||||||||||||||||||||
Sbjct 1728 GCAAGATGACTGTTGATAAGATTGACTTCATTCATGCTGTCGAGCGATCTATAGCGGGCA 1787
Query 1787 TAGAGAAGAAAACTGCAAGGTTAAAAGGTAGTGAGAAAGCTGTG 1830
||||||||||||| || |||||||||||||||||||||||||||
Sbjct 1788 TAGAGAAGAAAACAGCTAGGTTAAAAGGTAGTGAGAAAGCTGTG 1831
Score = 917 bits (496), Expect = 0.0
Identities = 533/551 (97%), Gaps = 2/551 (0%)
Strand=Plus/Plus
Query 1883 CATTGGGCTTTACATACATTCCTCCAACACATGAAGACAGATATTTGCT-TTTCATTGAT 1941
|||||||||||||||||||||| ||||| |||||||||||||||||||| ||| ||||||
Sbjct 1941 CATTGGGCTTTACATACATTCCCCCAACGCATGAAGACAGATATTTGCTCTTT-ATTGAT 1999
Query 1942 GAACTACATGGCCTCTTGGTAACACTTCTTGGAGGTCGTGCAGCTGAAGAGGTTGTTTAC 2001
||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 2000 GAACTACATGGCCGCTTGGTAACTCTTCTTGGAGGTCGTGCAGCTGAAGAGGTTGTTTAC 2059
Query 2002 TCGGGGCGTATATCAACAGGTGCACTTGATGATATCAGGAGAGCAACCGACATGGCTTAT 2061
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 2060 TCGGGGCGTATATCAACAGGTGCACTTGATGATATCAGGAGAGCAACCGACATGGCCTAT 2119
Query 2062 AAGGCAGTAGCTGAATATGGTCTTAACCAGAAAATCGGACCCGTCTCTGTGGCTACGCTT 2121
||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||
Sbjct 2120 AAGGCAGTAGCTGAATATGGTCTCAACGAGAAAATCGGACCCGTCTCTGTGGCTACGCTT 2179
Query 2122 TCTGCTGGTGGGATTGATGACTCTGGGGGATCACCATGGGGAAGAGATCAGGGGCATCTA 2181
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2180 TCTGCTGGTGGGATTGATGACTCTGGGGGATCACCATGGGGAAGAGATCAGGGGCATCTG 2239
Query 2182 GTTGATCTTGTTCAAAGAGAGGTGACAAATTTGTTGCAATCTGCTCTGGATGTTGCGTTG 2241
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2240 GTTGACCTTGTTCAAAGAGAGGTGACAAATTTGTTGCAATCTGCTCTGGATGTTGCGTTG 2299
Query 2242 ACTGTTGTTCGCGCTAATCCAGATGTATTAGAAGGGCTCGGTGCTCAACTGGAAGATGAA 2301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2300 ACTGTTGTTCGCGCTAATCCAGATGTATTAGAAGGGCTCGGTGCTCAACTGGAAGATGAA 2359
Query 2302 GAGAAAGTAGAAGATGAAGAGTTGCAGAAATGGTTAAATAGAGTAGTGCCCTCAGAGGAA 2361
||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 2360 GAGAAAGTAGAAGGTGAAGAGTTGCAGAAATGGTTAAATAGAGTAGTACCCTCAGAGGAA 2419
Query 2362 CTTGCAGTGTTCATCAACGGAAAACGAGCTGCTTTGCTTCCAGCACAAGCTAGCTCCAGT 2421
||||||||||||||||| ||||||| | ||||||| ||||||||||||||||||||||||
Sbjct 2420 CTTGCAGTGTTCATCAAAGGAAAACAAACTGCTTTACTTCCAGCACAAGCTAGCTCCAGT 2479
Query 2422 TAACGTCTACA 2432
|||| ||||||
Sbjct 2480 TAACATCTACA 2490
Score = 255 bits (138), Expect = 1e-66
Identities = 179/197 (91%), Gaps = 10/197 (5%)
Strand=Plus/Plus
Query 2432 AGAATCAAAAAGCTAAAAGGATCTGGTGAGTCCTGGCCATCGATGACTTAGTATGTAT-- 2489
||||||||||||||||||||| || | || |||||| || ||||||||||||||||||
Sbjct 2545 AGAATCAAAAAGCTAAAAGGAGCT-GCGAATCCTGGGCAACGATGACTTAGTATGTATAG 2603
Query 2490 -AGaaaaaaaaaGCTTTTACTTGGTATCAAACAGAGCATGTGTTGTTGTATTTGCTACCt 2548
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2604 AAGAAAAAAAAAGCTTTTACTTGGTATCAAACAGAGCATGTGTTGTTGTATTTGCTACCT 2663
Query 2549 ttttttCCGCAATGTTATTGGCAATTGTATTATTGTTCCACTTGTATACATATATACAGA 2608
|||| | |||| |||||||||||||||||| |||||||||||||||| |||| ||||
Sbjct 2664 TTTTCT--GCAAAGTTATTGGCAATTGTATTGTTGTTCCACTTGTATA--TATA--CAGA 2717
Query 2609 GACCATTTATGTTAATA 2625
|||||||||||||||||
Sbjct 2718 GACCATTTATGTTAATA 2734
> AT3G47060.1 | Symbols: ftsh7 | FTSH protease 7 | chr3:17332985-17336966
FORWARD LENGTH=2776
Length=2776
Score = 1616 bits (875), Expect = 0.0
Identities = 1473/1752 (84%), Gaps = 80/1752 (5%)
Strand=Plus/Plus
Query 116 CTTGTTGTAGTACTAGTAGTTTATTGTATTTGCATGCTTCTAGCTTTTTCCGA-GATCGG 174
|||||||||||| || |||| ||||||| | | | ||||| || ||||| | | |||| |
Sbjct 64 CTTGTTGTAGTAGTAATAGTCTATTGTACTCGAAAGCTTCGAGATTTTT-CAACGATC-G 121
Query 175 TCT-TTTGGTTT-TCGTCAGAATCCGAATCGATTTGTCTCCAATTCAATTCA-ACTT-C- 229
| | | ||||| ||| || ||||||||||| |||||||||||||||| ||| ||| |
Sbjct 122 T-TGTAGGGTTTATCGCCAAAATCCGAATCGGTTTGTCTCCAATTCAA-TCACGCTTCCT 179
Query 230 CT-C-----AATC-AGTTACAGGGTCGATAAACCATGAAAGGTTCAATCTTTGGCAAGGG 282
|| | || | |||||||| || || ||| || |||||||| ||||||||| | |||
Sbjct 180 CTGCAGAAGAAACAAGTTACAGTGTTGAGAAATCACGAAAGGTTTAATCTTTGGGATGGG 239
Query 283 TTTTCGAGGAAGAAGAGTACTAGTAGTAGAACGATTGTGAATTGTCAAGAAGGTGATCAG 342
||||| || |||||||| ||| | | | | |||||||||||||||||| |||||||
Sbjct 240 TTTTCAAGAAAGAAGAG---TAG-A-T--TA-G-TTGTGAATTGTCAAGAAGATGATCAG 290
Query 343 AAAGCTAGCTCAAGTGAAGGA-GAAGGAAAGACAAATTC-GA--A-TTCGTCGAAG-C-- 394
|| | || || |||| |||| ||| ||||| | | || || | | || ||||| |
Sbjct 291 AACGAGAGTTCTAGTG-AGGAGGAA-GAAAG-C--AGTCAGAGTACTCCGGCGAAGTCGG 345
Query 395 --A-GAAAGGAG-GTAAGCAAGGTAAGAAT-GGGTTATGGTGGTCTAAAGGG-AAGAAAT 448
| |||| ||| | ||| || | ||| || || | |||||||| |||||| |||||||
Sbjct 346 AGAGGAAAAGAGAG-AAG-AAAG-AAG-ATAAGG-TGTGGTGGTC-AAAGGGCAAGAAAT 399
Query 449 GGCAGTGGGAACCGATTATTCAAGCGC-AGGAGATTGGTGTTTTATTACTACAATTGGGT 507
|||||||| | || || || ||||||| ||| |||||| ||||| || | |||||| ||
Sbjct 400 GGCAGTGGCAGCCAATAATCCAAGCGCAAGG-GATTGGAGTTTTGTTGTTGCAATTGAGT 458
Query 508 ATTGTTATGTTTGTGGTGCGATTGCTTCGACCTGGAATCCCGTTACCGGGTTCGGAGCCT 567
|||||||||||||| ||||||||||||||||||| || || ||||| || |||||||||
Sbjct 459 GTTGTTATGTTTGTGATGCGATTGCTTCGACCTGGTATACCTTTACCTGGATCGGAGCCT 518
Query 568 CGCACACAGACGACGTTTATGAGTGTACCGTATAGTGATTTCTTGAGTAAAGTTAACAAT 627
|| | |||||||| ||| ||||||||||||||||||| ||||| ||||||||||||| |
Sbjct 519 CGAATTCAGACGACTTTTGTGAGTGTACCGTATAGTGAGTTCTTAAGTAAAGTTAACAGT 578
Query 628 GATGAGGTTCAGAAAGTGGAGGTAGATGGTGTTCATGTTTTGTTTAAGTTGAA-AGATGA 686
| |||| |||||||||||||| ||||| ||||| |||||||||||||| || ||||||
Sbjct 579 AACCAGGTGCAGAAAGTGGAGGTTGATGGGGTTCAAGTTTTGTTTAAGTT-AAGAGATGA 637
Query 687 TGGGAATTTGCAAGAGAGTGAAACTAGTGGTAGTAAGCTT-TCTGAGTCGTCTGAGA-C- 743
|||||| | ||||||||||||||||| |||| | || ||| |||||||||| | |
Sbjct 638 TGGGAAGTGGCAAGAGAGTGAAACTA---GTAG---G-TTGTCTCAGTCGTCTGA-ATCG 689
Query 744 TATGCTT-AGAAGTGTGGCTCCGACTAAAAGGGTTGTATATTCCACCACAAGGCCGAGG- 801
| || || |||| ||||||||| || ||||||||||| |||||||| || |||||| ||
Sbjct 690 T-TG-TTAAGAACTGTGGCTCCTACGAAAAGGGTTGTGTATTCCACTACTAGGCCG-GGT 746
Query 802 GATATTAAAACGCCGTACGAGAAAATGCTTGAGAATAATGTGGAATTCGGGTCGCCTGAT 861
||||| ||||| ||||| ||||| ||||||| ||||||||||||||| || ||||||||
Sbjct 747 GATATCAAAACACCGTATGAGAAGATGCTTGGGAATAATGTGGAATTTGGATCGCCTGAG 806
Query 862 AAGCGCTCTGGTGGCTTTTTCAACTCTGGATTGATAGTTCTATTCTACATTGCAGTGCTT 921
||||| ||||||||||| |||||||||| |||||||| ||| |||||||| || || |||
Sbjct 807 AAGCGTTCTGGTGGCTTCTTCAACTCTGCATTGATAGCTCTTTTCTACATAGCGGTACTT 866
Query 922 GCAGGGCTTCTCCACCGATTTCCTGTTAACTTTTCCCA-GAGTACAACGGGACAACTGAG 980
|| |||||| | ||||| ||||||| ||| | ||| |||| |||| || || || ||
Sbjct 867 GCTGGGCTTAT---TCGATTCCCTGTTAGCTTCT-CCACGAGTTCAACCGGCCAGCTTAG 922
Query 981 GACACGCAAGTCTGGTGGTCCTGGTGGGGGGAAAGTTTCTGGTGAAGGTGAAACAATCAC 1040
||| || ||| |||||||||||| |||||| ||||| ||||||| |||||||||||||||
Sbjct 923 GACCCGAAAGGCTGGTGGTCCTGATGGGGGAAAAGTCTCTGGTGGAGGTGAAACAATCAC 982
Query 1041 TTTTGCAGATGTTGCTGGTGTTGATGAAGCAAAGGAAGAGCTGGAAGAGATTGTGGAATT 1100
|||||| |||||||| |||||||||||||||||||||||||| ||||| || ||||||||
Sbjct 983 TTTTGCGGATGTTGCAGGTGTTGATGAAGCAAAGGAAGAGCTAGAAGAAATCGTGGAATT 1042
Query 1101 TCTCAAGAATCCTGATAGGTATGTCCGTCTAGGTGCTCGTCCCCCTCGTGGTGTCTTATT 1160
||| | ||||||||| | |||||||||||||||||| ||||| || ||||||||| ||||
Sbjct 1043 TCTTAGGAATCCTGAAAAGTATGTCCGTCTAGGTGCACGTCCTCCGCGTGGTGTCCTATT 1102
Query 1161 GGTCGGTC-TCCCTGGAACAGGGAAAACCCTTCTTGCAAAAGCTGTTGCTGGGGAATCTG 1219
||| |||| |||| |||||||||||||||||||||||||| ||||||||||||||| |||
Sbjct 1103 GGTTGGTCTTCCC-GGAACAGGGAAAACCCTTCTTGCAAAGGCTGTTGCTGGGGAAGCTG 1161
Query 1220 ATGTCCCCTTCATAAGTTGCTCTGCAAGTGAGTTTGTAGAGCTGTATGTTGGCATGGGTG 1279
| ||||||||||||||||||||||||||||||||||||||||||||||| || |||||||
Sbjct 1162 AAGTCCCCTTCATAAGTTGCTCTGCAAGTGAGTTTGTAGAGCTGTATGTCGGTATGGGTG 1221
Query 1280 CTTCACGCGTAAGGGATCTTTTTGCACGGGCCAAGAAGGAGGCTCCGTCAATTATATTTA 1339
| ||||| |||||||||||||||||||||||||||||||| ||||| || ||||||||||
Sbjct 1222 CCTCACGTGTAAGGGATCTTTTTGCACGGGCCAAGAAGGAAGCTCCATCGATTATATTTA 1281
Query 1340 TAGATGAGATAGATGCTGTCGCGAAAAGCCGTGATGGTAAATTCAGAATGGTCAGCAATG 1399
| ||||||||||||||||| || ||||||||||||||||||||| |||||| ||||| |
Sbjct 1282 TTGATGAGATAGATGCTGTGGCAAAAAGCCGTGATGGTAAATTCCGAATGGGGAGCAACG 1341
Query 1400 ATGAAAGAGAGCAAACTTTGAATCAGTTGCTCACTGAGATGGATGGTTTTGACAGTAGCT 1459
||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| | |
Sbjct 1342 ATGAAAGGGAGCAAACTTTAAATCAGTTGCTCACTGAGATGGATGGTTTTGACAGCAATT 1401
Query 1460 CAGCAGTTATTGTTCTTGGAGCTACCAATCGAGCTGATGTCTTAGACCCCGCCCTGCGTC 1519
| || ||||| |||||||||||||| ||||| || ||||||||||| || ||||||||||
Sbjct 1402 CTGCGGTTATCGTTCTTGGAGCTACAAATCGTGCCGATGTCTTAGATCCGGCCCTGCGTC 1461
Query 1520 GGCCTGGGAGATTTGATCGTGTTGTTACGGTGGAATCACCTGACAAAGTTGGAAGAGAAT 1579
| ||||||||||||||||||||||||||||||||| | || |||||| ||||||||||||
Sbjct 1462 GTCCTGGGAGATTTGATCGTGTTGTTACGGTGGAAACGCCAGACAAAATTGGAAGAGAAT 1521
Query 1580 CCATATTGAAAGTGCATGTTTCAAAGAAAGAGCTTCCTTTGGGAAATGATGTCAACCTAG 1639
|||| |||| ||| ||||| |||||||||||||||||||||||| ||||||||||||| |
Sbjct 1522 CCATTTTGAGAGTACATGTGTCAAAGAAAGAGCTTCCTTTGGGAGATGATGTCAACCTCG 1581
Query 1640 CTAGTAGTGCCTCAATGACAACCGGTTTTACTGGGGCAGACCTTGCGAACCTAGTTAATG 1699
||||| |||||||||||| || ||||| || |||||||| ||||| ||| | || ||||
Sbjct 1582 GTAGTATTGCCTCAATGACCACTGGTTTCACGGGGGCAGATCTTGCAAACTTGGTAAATG 1641
Query 1700 AGGCTGCTTTACTAGCGGGAAGGAAGAGCAAGATGA-CTGTTGAAAAAATTGACTTCATT 1758
||||||| || ||||| ||||| |||| ||||| || | ||||| |||||||||||||||
Sbjct 1642 AGGCTGCCTTGCTAGCTGGAAGAAAGAACAAGACGAAC-GTTGAGAAAATTGACTTCATT 1700
Query 1759 CAGGCTGTCGAGCGATCTATAGCGGGCATAGAGAAGAAAACTGCAAGGTTAAAAGGTAGT 1818
|| ||||| |||||||| ||||||||||||||||||||| ||||||| |||||||| | |
Sbjct 1701 CAAGCTGTGGAGCGATCAATAGCGGGCATAGAGAAGAAATCTGCAAGATTAAAAGGCAAT 1760
Query 1819 GAGAAAGCTGTG 1830
||||| || |||
Sbjct 1761 GAGAAGGCAGTG 1772
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 130333717914
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5