BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg479985
Length=904
Score E
Sequences producing significant alignments: (Bits) Value
AT2G16832.1 | Symbols: | transposable element gene | chr2:7293... 455 4e-127
AT2G17460.1 | Symbols: | transposable element gene | chr2:7582... 455 4e-127
AT3G29777.1 | Symbols: | transposable element gene | chr3:1165... 449 2e-125
AT1G30980.1 | Symbols: | transposable element gene | chr1:1104... 438 4e-122
AT4G04495.1 | Symbols: | transposable element gene | chr4:2236... 436 1e-121
AT3G28800.1 | Symbols: | transposable element gene | chr3:1081... 435 5e-121
AT3G59860.1 | Symbols: | transposable element gene | chr3:2211... 427 8e-119
AT5G28637.1 | Symbols: | transposable element gene | chr5:1064... 416 2e-115
AT1G32505.1 | Symbols: | transposable element gene | chr1:1175... 346 2e-94
AT5G03950.1 | Symbols: | transposable element gene | chr5:1066... 302 5e-81
AT1G55400.1 | Symbols: | transposable element gene | chr1:2068... 302 5e-81
AT5G44313.1 | Symbols: | transposable element gene | chr5:1785... 296 2e-79
AT5G27590.1 | Symbols: | transposable element gene | chr5:9738... 291 1e-77
AT1G17900.1 | Symbols: | transposable element gene | chr1:6157... 291 1e-77
AT4G05584.1 | Symbols: | transposable element gene | chr4:2864... 222 4e-57
AT3G45120.1 | Symbols: | transposable element gene | chr3:1651... 193 3e-48
AT2G16820.1 | Symbols: | transposable element gene | chr2:7290... 176 3e-43
AT4G05583.2 | Symbols: | transposable element gene | chr4:2860... 130 2e-29
AT3G42626.1 | Symbols: | transposable element gene | chr3:1471... 75.0 1e-12
AT2G06600.1 | Symbols: | transposable element gene | chr2:2639... 75.0 1e-12
AT5G28487.1 | Symbols: | transposable element gene | chr5:1044... 71.3 2e-11
AT2G05490.1 | Symbols: | transposable element gene | chr2:2006... 71.3 2e-11
AT2G12150.1 | Symbols: | transposable element gene | chr2:4884... 71.3 2e-11
AT1G45070.1 | Symbols: | transposable element gene | chr1:1703... 71.3 2e-11
AT3G28110.1 | Symbols: | transposable element gene | chr3:1046... 69.4 5e-11
AT2G16150.1 | Symbols: | transposable element gene | chr2:7009... 69.4 5e-11
AT1G29075.1 | Symbols: | transposable element gene | chr1:1015... 65.8 7e-10
> AT2G16832.1 | Symbols: | transposable element gene | chr2:7293623-7294681
FORWARD LENGTH=1059
Length=1059
Score = 455 bits (246), Expect = 4e-127
Identities = 281/298 (94%), Gaps = 2/298 (1%)
Strand=Plus/Minus
Query 1 TCATACGATGTGATTTTGAAACATTCTGAATTCTTGACAACTTGAGCTGTCAAATGCCAT 60
|||||||||||||||||||||||||||||||||||||| || ||||| |||||||| |||
Sbjct 1046 TCATACGATGTGATTTTGAAACATTCTGAATTCTTGACGACATGAGCAGTCAAATGTCAT 987
Query 61 GGACAAGTATCATCAACGCAGACCATCTCCAATCTTGTAGGACATGACCTACGTTGCTTG 120
|||||||||||||||||||| |||||| |||||||||||||| |||||||| ||||||||
Sbjct 986 GGACAAGTATCATCAACGCATACCATCACCAATCTTGTAGGATATGACCTAGGTTGCTTG 927
Query 121 TAGC-AAAAGCATTGTTTGATTGCGAGATAAGACATTGTTTGTTGTATGACTTTTCTGTT 179
|||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 926 TAGCAAAAAG-ATTGTTTGATTGCGAGATAAGACATTGTTTGTTGTATGACTTTTCTGTT 868
Query 180 CTTAAAAACACTCTCCAATCTGTAGTGTACGTACATTGGTACAAACCATGTTGACACGTA 239
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||
Sbjct 867 CTTAAAAACACTCTCCAATCTATAGTGTACGTACATTGGTACAAACCATGTTGACACATA 808
Query 240 CGTCTTGGAGTCACCGTTGGTGTACGGTCACCCGAATGAGAAATGTTATCTCCGCCAG 297
| |||||||||||| | ||||||||||||||||| ||||||||||||||||||||||
Sbjct 807 CTTCTTGGAGTCACAGCTGGTGTACGGTCACCCGGGTGAGAAATGTTATCTCCGCCAG 750
Score = 274 bits (148), Expect = 1e-72
Identities = 325/402 (81%), Gaps = 46/402 (11%)
Strand=Plus/Minus
Query 541 TAGGATCGAGGGTACTTcccccccATAGATCCATCATCACCCTGATAATCATCATACCCA 600
||||||||| ||||||| |||||||||||||||| |||| |||||||||||||||||||
Sbjct 567 TAGGATCGATGGTACTT--CCCCCATAGATCCATCGTCACACTGATAATCATCATACCCA 510
Query 601 GCACCATCTTCGTTGTCCTCCTCCTCTTCTTCATCCTCATCTGTTTTATCGTCTTCAACG 660
||||||||||||||| | || || | |||||||||||||||||||||||||||||| |
Sbjct 509 TCACCATCTTCGTTGT-C-CC-CC-CAACTTCATCCTCATCTGTTTTATCGTCTTCAATG 454
Query 661 TCGTCTTGCTCATCTACGGCCTCATTATTTCCATCTACATTTGAAGCACTCCCACACACA 720
|||||||||| ||||||||||||||||||| |||| |||||| || |||| ||||||||
Sbjct 453 TCGTCTTGCTAATCTACGGCCTCATTATTTTCATCAACATTTAAAACACTATCACACACA 394
Query 721 CGGT-A-----A-C-TC-TCACCATCG-GTCCTAGGGACAGTATTCCCGAGTG-CTT--- 766
|||| | | | || ||||||| | ||||||| |||| |||||||||||| |||
Sbjct 393 CGGTCACTTTCAGCATCGTCACCAT-GAGTCCTAGAGACATTATTCCCGAGTGTCTTGAC 335
Query 767 --T-G-AA--A--GAGACAAACAAGGTGACACTAGGATCCCCACCACGAATGAAAAA--T 816
| | || | ||||||||||| ||| | ||||| |||||||||||| ||||| |
Sbjct 334 GGTTGTAATGAAAGAGACAAACAAATTGAGAGAAGGATACCCACCACGAATAAAAAAAAT 275
Query 817 C--AT-------T---T-GATTGTCAATGTATACAGGAGGGCGTTTACTTTCTATCATCA 863
| || | | || |||||||||| ||||||||||||||| | ||||||||||
Sbjct 274 CGTATCCCACCCTCACTTGACTGTCAATGTAGACAGGAGGGCGTTTAGTATCTATCATCA 215
Query 864 CTGACATCTTTCCCGGCATCCAGTAACTAATTATTG-GATTG 904
|| |||||| |||||| ||||| ||||||||||| | |||||
Sbjct 214 CTAACATCTCTCCCGGTATCCATTAACTAATTAT-GAGATTG 174
Score = 111 bits (60), Expect = 9e-24
Identities = 97/113 (86%), Gaps = 9/113 (8%)
Strand=Plus/Minus
Query 370 TGTACGTACATTGGTACAAACCATGTTGACACGTACGTCTTGGAGTCACCGTTGGTGTAC 429
|||||||||||||||||||||||||||||||| ||| |||||||||||| | ||||||||
Sbjct 842 TGTACGTACATTGGTACAAACCATGTTGACACATACTTCTTGGAGTCACAGCTGGTGTAC 783
Query 430 GGTCAACCG----AG---T-T-ATCTCCCCCAGGTACACGATGACTTGTGTAC 473
||||| ||| || | | |||||| ||||||||||| ||||||||||||
Sbjct 782 GGTCACCCGGGTGAGAAATGTTATCTCCGCCAGGTACACGTTGACTTGTGTAC 730
Score = 86.1 bits (46), Expect = 5e-16
Identities = 58/64 (91%), Gaps = 0/64 (0%)
Strand=Plus/Minus
Query 474 TGAGAATGACGTCCTCCTCAACATTCCCTATTCCATATTCTTCAATAATTAAATCGTTCC 533
|||||||||||| |||||||||||||||||||||||||||||| | |||| |||| |||
Sbjct 674 TGAGAATGACGTTCTCCTCAACATTCCCTATTCCATATTCTTCTACAATTTCATCGCTCC 615
Query 534 ACTT 537
||||
Sbjct 614 ACTT 611
> AT2G17460.1 | Symbols: | transposable element gene | chr2:7582174-7583230
FORWARD LENGTH=1057
Length=1057
Score = 455 bits (246), Expect = 4e-127
Identities = 281/298 (94%), Gaps = 2/298 (1%)
Strand=Plus/Minus
Query 1 TCATACGATGTGATTTTGAAACATTCTGAATTCTTGACAACTTGAGCTGTCAAATGCCAT 60
||||||||||||||||||||| |||||||||||||||| |||||||| |||||||| |||
Sbjct 1044 TCATACGATGTGATTTTGAAATATTCTGAATTCTTGACGACTTGAGCAGTCAAATGTCAT 985
Query 61 GGACAAGTATCATCAACGCAGACCATCTCCAATCTTGTAGGACATGACCTACGTTGCTTG 120
|||||||||||||||||||| |||||| |||||||||||||| |||||||| ||||||||
Sbjct 984 GGACAAGTATCATCAACGCATACCATCACCAATCTTGTAGGATATGACCTAGGTTGCTTG 925
Query 121 TAGC-AAAAGCATTGTTTGATTGCGAGATAAGACATTGTTTGTTGTATGACTTTTCTGTT 179
|||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 924 TAGCAAAAAG-ATTGTTTGATTGCGAGATAAGACATTGTTTGTTGTATGACTTTTCTGTT 866
Query 180 CTTAAAAACACTCTCCAATCTGTAGTGTACGTACATTGGTACAAACCATGTTGACACGTA 239
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||
Sbjct 865 CTTAAAAACACTCTCCAATCTATAGTGTACGTACATTGGTACAAACCATGTTGACACATA 806
Query 240 CGTCTTGGAGTCACCGTTGGTGTACGGTCACCCGAATGAGAAATGTTATCTCCGCCAG 297
| |||||||||||| | ||||||||||||||||| ||||||||||||||||||||||
Sbjct 805 CTTCTTGGAGTCACAGCTGGTGTACGGTCACCCGGGTGAGAAATGTTATCTCCGCCAG 748
Score = 278 bits (150), Expect = 8e-74
Identities = 326/402 (81%), Gaps = 47/402 (12%)
Strand=Plus/Minus
Query 541 TAGGATCGAGGGTACTTcccccccATAGATCCATCATCACCCTGATAATCATCATACCCA 600
||||||||| ||||||| |||||||||||||||| ||||||||||||||||||||||||
Sbjct 564 TAGGATCGATGGTACTT--CCCCCATAGATCCATCGTCACCCTGATAATCATCATACCCA 507
Query 601 GCACCATCTTCGTTGTCCTCCTCCTCTTCTTCATCCTCATCTGTTTTATCGTCTTCAA-C 659
||||||||||||||| | || || | ||||||||||||||||||||||||||||||| |
Sbjct 506 TCACCATCTTCGTTGT-C-CC-CC-CATCTTCATCCTCATCTGTTTTATCGTCTTCAATC 451
Query 660 GTCGTCTTGCTCATCTACGGCCTCATTATTTCCATCTACATTTGAAGCACTCCCACACAC 719
||||||| || ||||| ||||||||||||| |||| |||||| || |||| |||||||
Sbjct 450 -TCGTCTTACTAATCTATGGCCTCATTATTTTCATCAACATTTAAAACACTATCACACAC 392
Query 720 ACGGT-A-----A-C-TC-TCACCATCG-GTCCTAGGGACAGTATTCCCGAGTG-CTT-- 766
||||| | | | || ||||||| | ||||||| |||| |||||||||||| |||
Sbjct 391 ACGGTCACTTTCAGCATCGTCACCAT-GAGTCCTAGAGACATTATTCCCGAGTGTCTTGA 333
Query 767 ---T-G-AA--A--GAGACAAACAAGGTGACACTAGGATCCCCACCACGAATGAAAAA-- 815
| | || | |||||||||||| ||| | ||||| |||||||||||| |||||
Sbjct 332 CGGTTGTAATGAAAGAGACAAACAAGTTGAGAGAAGGATACCCACCACGAATAAAAAAAA 273
Query 816 TC--AT-------T---T-GATTGTCAATGTATACAGGAGGGCGTTTACTTTCTATCATC 862
|| || | | || |||||||||| ||||||||||||||| | |||||||||
Sbjct 272 TCGTATCCCACCCTCACTTGACTGTCAATGTAGACAGGAGGGCGTTTAGTATCTATCATC 213
Query 863 ACTGACATCTTTCCCGGCATCCAGTAACTAATTATTGGATTG 904
||| |||||| ||||| ||||||||||||||||| ||||||
Sbjct 212 ACTAACATCTCTCCCGT-ATCCAGTAACTAATTATGGGATTG 172
Score = 111 bits (60), Expect = 9e-24
Identities = 97/113 (86%), Gaps = 9/113 (8%)
Strand=Plus/Minus
Query 370 TGTACGTACATTGGTACAAACCATGTTGACACGTACGTCTTGGAGTCACCGTTGGTGTAC 429
|||||||||||||||||||||||||||||||| ||| |||||||||||| | ||||||||
Sbjct 840 TGTACGTACATTGGTACAAACCATGTTGACACATACTTCTTGGAGTCACAGCTGGTGTAC 781
Query 430 GGTCAACCG----AG---T-T-ATCTCCCCCAGGTACACGATGACTTGTGTAC 473
||||| ||| || | | |||||| ||||||||||| ||||||||||||
Sbjct 780 GGTCACCCGGGTGAGAAATGTTATCTCCGCCAGGTACACGCTGACTTGTGTAC 728
Score = 97.1 bits (52), Expect = 3e-19
Identities = 62/67 (93%), Gaps = 0/67 (0%)
Strand=Plus/Minus
Query 474 TGAGAATGACGTCCTCCTCAACATTCCCTATTCCATATTCTTCAATAATTAAATCGTTCC 533
|||||||||||| |||||||||||||||||||||||||||||| | |||| ||||||||
Sbjct 672 TGAGAATGACGTTCTCCTCAACATTCCCTATTCCATATTCTTCTACAATTTCATCGTTCC 613
Query 534 ACTTGTT 540
|||||||
Sbjct 612 ACTTGTT 606
> AT3G29777.1 | Symbols: | transposable element gene | chr3:11658757-11659845
REVERSE LENGTH=1089
Length=1089
Score = 449 bits (243), Expect = 2e-125
Identities = 280/298 (94%), Gaps = 2/298 (1%)
Strand=Plus/Minus
Query 1 TCATACGATGTGATTTTGAAACATTCTGAATTCTTGACAACTTGAGCTGTCAAATGCCAT 60
||||||||||||||||||||| |||||||||||||||| |||||||| |||||||| |||
Sbjct 1046 TCATACGATGTGATTTTGAAATATTCTGAATTCTTGACGACTTGAGCAGTCAAATGTCAT 987
Query 61 GGACAAGTATCATCAACGCAGACCATCTCCAATCTTGTAGGACATGACCTACGTTGCTTG 120
|||||||||||||||||||| |||||| |||||||||||||| |||||||| ||||||||
Sbjct 986 GGACAAGTATCATCAACGCATACCATCACCAATCTTGTAGGATATGACCTAGGTTGCTTG 927
Query 121 TAGC-AAAAGCATTGTTTGATTGCGAGATAAGACATTGTTTGTTGTATGACTTTTCTGTT 179
|||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 926 TAGCAAAAAG-ATTGTTTGATTGCGAGATAAGACATTGTTTGTTGTATGACTTTTCTGTT 868
Query 180 CTTAAAAACACTCTCCAATCTGTAGTGTACGTACATTGGTACAAACCATGTTGACACGTA 239
|||||||||||||| |||||| ||||||||||||||||||||||||||||||||||| ||
Sbjct 867 CTTAAAAACACTCTTCAATCTATAGTGTACGTACATTGGTACAAACCATGTTGACACATA 808
Query 240 CGTCTTGGAGTCACCGTTGGTGTACGGTCACCCGAATGAGAAATGTTATCTCCGCCAG 297
| |||||||||||| | ||||||||||||||||| ||||||||||||||||||||||
Sbjct 807 CTTCTTGGAGTCACAGCTGGTGTACGGTCACCCGGGTGAGAAATGTTATCTCCGCCAG 750
Score = 279 bits (151), Expect = 2e-74
Identities = 325/401 (81%), Gaps = 44/401 (11%)
Strand=Plus/Minus
Query 541 TAGGATCGAGGGTACTTcccccccATAGATCCATCATCACCCTGATAATCATCATACCCA 600
||||||||| ||||||| |||||||||||||||| ||||||||||||||||||||||||
Sbjct 567 TAGGATCGATGGTACTT--CCCCCATAGATCCATCGTCACCCTGATAATCATCATACCCA 510
Query 601 GCACCATCTTCGTTGTCCTCCTCCTCTTCTTCATCCTCATCTGTTTTATCGTCTTCAA-C 659
||||||||||||||| | || || | ||||||||||||||||||||||||||||||| |
Sbjct 509 TCACCATCTTCGTTGT-C-CC-CC-CATCTTCATCCTCATCTGTTTTATCGTCTTCAATC 454
Query 660 GTCGTCTTGCTCATCTACGGCCTCATTATTTCCATCTACATTTGAAGCACTCCCACACAC 719
|||||||||| ||||| ||||||||||||| |||| |||||| || |||| |||||||
Sbjct 453 -TCGTCTTGCTAATCTATGGCCTCATTATTTTCATCAACATTTAAAACACTATCACACAC 395
Query 720 ACGGTAACTCTCACCATCG-------G--TCCTAGGGACAGTATTCCCGAGTG-CTT--- 766
||||| ||| ||| ||||| | |||||| |||| |||||||||||| |||
Sbjct 394 ACGGTCACTTTCAGCATCGTCACCATGACTCCTAGAGACATTATTCCCGAGTGTCTTGAC 335
Query 767 --T-G-AA--A--GAGACAAACAAGGTGACACTAGGATCCCCACCACGAATGAAAAA--T 816
| | || | |||||||||||| ||| | ||||| |||||||||||| ||||| |
Sbjct 334 GGTTGTAATGAAAGAGACAAACAAGTTGAGAGAAGGATACCCACCACGAATAAAAAAAAT 275
Query 817 CAT-T-------TGA-TTG--TC--AATGTATACAGGAGGGCGTTTACTTTCTATCATCA 863
| | | | | ||| || |||||| ||||||||||||||| | ||||||||||
Sbjct 274 CGTATCCCACCCTCACTTGACTCTCAATGTAGACAGGAGGGCGTTTAGTATCTATCATCA 215
Query 864 CTGACATCTTTCCCGGCATCCAGTAACTAATTATTGGATTG 904
|| |||||| |||||| ||||||||||||||||| ||||||
Sbjct 214 CTAACATCTCTCCCGGTATCCAGTAACTAATTATGGGATTG 174
Score = 106 bits (57), Expect = 4e-22
Identities = 96/113 (85%), Gaps = 10/113 (9%)
Strand=Plus/Minus
Query 370 TGTACGTACATTGGTACAAACCATGTTGACACGTACGTCTTGGAGTCACCGTTGGTGTAC 429
|||||||||||||||||||||||||||||||| ||| |||||||||||| | ||||||||
Sbjct 842 TGTACGTACATTGGTACAAACCATGTTGACACATACTTCTTGGAGTCACAGCTGGTGTAC 783
Query 430 GGTCAACCG----AG---T-T-ATCTCCCCCAGGTACACGATGACTTGTGTAC 473
||||| ||| || | | |||||| ||||||| ||| ||||||||||||
Sbjct 782 GGTCACCCGGGTGAGAAATGTTATCTCCGCCAGGTA-ACGCTGACTTGTGTAC 731
Score = 91.6 bits (49), Expect = 1e-17
Identities = 61/67 (91%), Gaps = 0/67 (0%)
Strand=Plus/Minus
Query 474 TGAGAATGACGTCCTCCTCAACATTCCCTATTCCATATTCTTCAATAATTAAATCGTTCC 533
|||||||||||| ||||||||||||||||||||||||||||| | |||| ||||||||
Sbjct 675 TGAGAATGACGTTCTCCTCAACATTCCCTATTCCATATTCTTTTACAATTTCATCGTTCC 616
Query 534 ACTTGTT 540
|||||||
Sbjct 615 ACTTGTT 609
> AT1G30980.1 | Symbols: | transposable element gene | chr1:11049583-11050729
REVERSE LENGTH=1147
Length=1147
Score = 438 bits (237), Expect = 4e-122
Identities = 279/299 (93%), Gaps = 4/299 (1%)
Strand=Plus/Minus
Query 1 TCATACGATGTGATTTTGAAACATTCTGAATTCTTGACAACTTGAGCTGTCAAATGCCAT 60
||||||||||||||||||||| ||||| |||||||||| |||||||| |||||||| |||
Sbjct 1106 TCATACGATGTGATTTTGAAATATTCTTAATTCTTGACGACTTGAGCAGTCAAATGTCAT 1047
Query 61 GGACAAGTATCATCAACGCAGACCATCTCCAATCTTGTAGGACATGACCTACGTTGCTTG 120
|||||||||||||||||||| |||||| |||||||||||||| |||||||| ||||||||
Sbjct 1046 GGACAAGTATCATCAACGCATACCATCACCAATCTTGTAGGATATGACCTAGGTTGCTTG 987
Query 121 TAGC-AAAAGCATTGTTTGATTGCGAGATAAGACATTGTTTGTTGTATGACTTTTCTGTT 179
|||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 986 TAGCAAAAAG-ATTGTTTGATTGCGAGATAAGACATTGTTTGTTGTATGACTTTTCTGTT 928
Query 180 CTTAAAAACACTCTCCAATCTGTAGTGTACGTACATTGGTACAAACCATGTTGACACGTA 239
||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| ||
Sbjct 927 CTTAAAAACACTCTCCAATTTATAGTGTACGTACATTGGTACAAACCATGTTGACACATA 868
Query 240 CGT-CTTGGAGTCACCGTTGGTGTACGGTCACCCGAATGAGAAATGTTATCTCCGCCAG 297
|| ||||||||||| | ||||||||||||||||| ||||||||||||||||||||||
Sbjct 867 -GTTCTTGGAGTCACAGCTGGTGTACGGTCACCCGGGTGAGAAATGTTATCTCCGCCAG 810
Score = 289 bits (156), Expect = 4e-77
Identities = 326/401 (81%), Gaps = 40/401 (10%)
Strand=Plus/Minus
Query 541 TAGGATCGAGGGTACTTcccccccATAGATCCATCATCACCCTGATAATCATCATACCCA 600
||||||||| ||||||| ||| |||||||||||| ||||||||||||||||||||||||
Sbjct 626 TAGGATCGATGGTACTT--CCCTCATAGATCCATCGTCACCCTGATAATCATCATACCCA 569
Query 601 GCACCATCTTCGTTGTCCTCCTCCTCTTCTTCATCCTCATCTGTTTTATCGTCTTCAACG 660
||||||||||||||||| || || | ||||||||||||||||||||||||||||||| |
Sbjct 568 TCACCATCTTCGTTGTCCCCCCCCCCATCTTCATCCTCATCTGTTTTATCGTCTTCAATG 509
Query 661 TCGTCTTGCTCATCTACGGCCTCATTATTTCCATCTACATTTGAAGCACTCCCACACACA 720
||||||| || ||||||||||||||||||| |||| |||||| || |||| ||||||||
Sbjct 508 TCGTCTTCCTAATCTACGGCCTCATTATTTTCATCAACATTTAAAACACTATCACACACA 449
Query 721 CGGT-A-----A-C-TC-TCACCATCG-GTCCTAGGGACAGTATTCCCGAGTG-CTT--- 766
|||| | | | || ||||||| | ||||||| |||| |||||| ||||| |||
Sbjct 448 CGGTCACTTTCAGCATCGTCACCAT-GAGTCCTAGAGACATTATTCCTGAGTGTCTTGAC 390
Query 767 --T-G-AA--A--GAGACAAACAAGGTGACACTAGGATCCCCACCACGAATGAAAAA--T 816
| | || | |||||||||||| ||| | ||||| |||||||||||| ||||| |
Sbjct 389 AGTTGTAATGATAGAGACAAACAAGTTGAGAGAAGGATACCCACCACGAATAAAAAAAAT 330
Query 817 -----C--A---T---TTGATTGTCAATGTATACAGGAGGGCGTTTACTTTCTATCATCA 863
| | | |||| |||||||||| ||||||||||||||| | ||||||||||
Sbjct 329 TGTATCCCACCCTCACTTGACTGTCAATGTAGACAGGAGGGCGTTTAGTATCTATCATCA 270
Query 864 CTGACATCTTTCCCGGCATCCAGTAACTAATTATTGGATTG 904
|| |||||| || ||| ||||||||||||||||| ||||||
Sbjct 269 CTAACATCTCTCTCGGTATCCAGTAACTAATTATGGGATTG 229
Score = 106 bits (57), Expect = 4e-22
Identities = 97/114 (85%), Gaps = 11/114 (10%)
Strand=Plus/Minus
Query 370 TGTACGTACATTGGTACAAACCATGTTGACACGTACGT-CTTGGAGTCACCGTTGGTGTA 428
|||||||||||||||||||||||||||||||| || || ||||||||||| | |||||||
Sbjct 902 TGTACGTACATTGGTACAAACCATGTTGACACATA-GTTCTTGGAGTCACAGCTGGTGTA 844
Query 429 CGGTCAACCG----AG---T-T-ATCTCCCCCAGGTACACGATGACTTGTGTAC 473
|||||| ||| || | | |||||| ||||||||||| ||||||||||||
Sbjct 843 CGGTCACCCGGGTGAGAAATGTTATCTCCGCCAGGTACACGCTGACTTGTGTAC 790
Score = 91.6 bits (49), Expect = 1e-17
Identities = 61/67 (91%), Gaps = 0/67 (0%)
Strand=Plus/Minus
Query 474 TGAGAATGACGTCCTCCTCAACATTCCCTATTCCATATTCTTCAATAATTAAATCGTTCC 533
||||||||| || |||||||||||||||||||||||||||||| | |||| ||||||||
Sbjct 734 TGAGAATGATGTTCTCCTCAACATTCCCTATTCCATATTCTTCTACAATTTCATCGTTCC 675
Query 534 ACTTGTT 540
|||||||
Sbjct 674 ACTTGTT 668
> AT4G04495.1 | Symbols: | transposable element gene | chr4:2236004-2237046
REVERSE LENGTH=1043
Length=1043
Score = 436 bits (236), Expect = 1e-121
Identities = 273/291 (94%), Gaps = 2/291 (1%)
Strand=Plus/Minus
Query 1 TCATACGATGTGATTTTGAAACATTCTGAATTCTTGACAACTTGAGCTGTCAAATGCCAT 60
||||||||||||||||||||||||||||||||| |||| |||||||| |||||||| |||
Sbjct 1030 TCATACGATGTGATTTTGAAACATTCTGAATTCCTGACGACTTGAGCAGTCAAATGTCAT 971
Query 61 GGACAAGTATCATCAACGCAGACCATCTCCAATCTTGTAGGACATGACCTACGTTGCTTG 120
||||| |||||||||||||| || ||||||||||||||||||||||||||| |||||||
Sbjct 970 GGACAGGTATCATCAACGCATACTATCTCCAATCTTGTAGGACATGACCTAGGTTGCTTA 911
Query 121 TAGCAAAAGCATTGTTTGATTGCGAGATAAGACATTGTTTGTTGTATGACTTTTCTGTTC 180
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 910 TAGCAAAAACATTGTTTGATTGCGAGATAAGACATTGTTTGTTGTATGACTTTTCTGTTC 851
Query 181 TTAAAAACACTC-TCCAATCTGTAGTGTACGTACATTGGTACAAACCATGTTGACACGTA 239
||||||| |||| || ||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 850 TTAAAAATACTCCTC-AATCTATAGTGTACGTACATTGGTACAAACCATGTTGACACGTA 792
Query 240 CGTCTTGGAGTCACCGTTGGTGTACGGTCACCCGAATGAGAAATGTTATCT 290
| |||||||||||| | |||||||||||||||||| |||||||||||||||
Sbjct 791 CTTCTTGGAGTCACAGCTGGTGTACGGTCACCCGAGTGAGAAATGTTATCT 741
Score = 111 bits (60), Expect = 9e-24
Identities = 68/72 (94%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 370 TGTACGTACATTGGTACAAACCATGTTGACACGTACGTCTTGGAGTCACCGTTGGTGTAC 429
|||||||||||||||||||||||||||||||||||| |||||||||||| | ||||||||
Sbjct 826 TGTACGTACATTGGTACAAACCATGTTGACACGTACTTCTTGGAGTCACAGCTGGTGTAC 767
Query 430 GGTCAACCGAGT 441
||||| ||||||
Sbjct 766 GGTCACCCGAGT 755
Score = 97.1 bits (52), Expect = 3e-19
Identities = 62/67 (93%), Gaps = 0/67 (0%)
Strand=Plus/Minus
Query 474 TGAGAATGACGTCCTCCTCAACATTCCCTATTCCATATTCTTCAATAATTAAATCGTTCC 533
||| ||||| ||||||||||||||||||||||||||||||||| | ||||| ||||||||
Sbjct 658 TGAAAATGAAGTCCTCCTCAACATTCCCTATTCCATATTCTTCTACAATTACATCGTTCC 599
Query 534 ACTTGTT 540
|||||||
Sbjct 598 ACTTGTT 592
> AT3G28800.1 | Symbols: | transposable element gene | chr3:10817053-10818113
REVERSE LENGTH=1061
Length=1061
Score = 435 bits (235), Expect = 5e-121
Identities = 277/297 (93%), Gaps = 4/297 (1%)
Strand=Plus/Minus
Query 3 ATACGATGTGATTTTGAAACATTCTGAATTCTTGACAACTTGAGCTGTCAAATGCCATGG 62
|||||||||||||||||||||||||||||||||||| |||||||| |||||||| |||||
Sbjct 1046 ATACGATGTGATTTTGAAACATTCTGAATTCTTGACGACTTGAGCAGTCAAATGTCATGG 987
Query 63 ACAAGTATCATCAACGCAGACCATCTCCAATCTTGTAGGACATGACCTACGTTGCTTGTA 122
|||||||||||||||||| ||||||||||||||| |||||||||| ||| ||||||||||
Sbjct 986 ACAAGTATCATCAACGCATACCATCTCCAATCTTATAGGACATGATCTAGGTTGCTTGTA 927
Query 123 GC-AAAAGCATTGTTTGATTGCGAGATAAGACATTGTTTGTTGTATGACTTTTCTGTTCT 181
|| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 926 GCAAAAAG-ATTGTTTGATTGCGAGATAAGACATTGTTTGTTGTATGACTTTTCTGTTCT 868
Query 182 TAAAAACACTCTCCAATCTGTAGTGTACGTACATTGGTACAAACCATGTTGACACGTACG 241
|||||||||| |||||||| ||||||||||||||||||||||||||||||||||| |||
Sbjct 867 TAAAAACACTTTCCAATCTATAGTGTACGTACATTGGTACAAACCATGTTGACACATACT 808
Query 242 TCTTGGAGTCACCGTTGGTGTACGGTCACCCGAA-TGAGAAATGTTATCTCCGCCAG 297
|||||||||||| | |||||||||||||||| || ||| ||| |||||||||| |||
Sbjct 807 TCTTGGAGTCACAGCTGGTGTACGGTCACCC-AAGTGAAAAAAGTTATCTCCGTCAG 752
Score = 274 bits (148), Expect = 1e-72
Identities = 326/403 (81%), Gaps = 47/403 (12%)
Strand=Plus/Minus
Query 541 TAGGATCGAGGGTACTTcccccccATAGATCCATCATCACCCTGATAATCATCATACCCA 600
||||||||||||||||| ||| ||||||||||||| ||||||||||||||||||||||||
Sbjct 568 TAGGATCGAGGGTACTT-CCCTCCATAGATCCATCGTCACCCTGATAATCATCATACCCA 510
Query 601 GCACCATCTTCGTTG-TCCTCCTCCTCTTCTTCATCCTCATCTGTTTTATCGTCTTCAAC 659
||| |||||||||| ||| ||| | ||| ||||||||||||||||||||||||||||||
Sbjct 509 TCACTATCTTCGTTGTTCC-CCT-C-CTT-TTCATCCTCATCTGTTTTATCGTCTTCAAC 454
Query 660 GTCGTCTTGCTCATCTACGGCCTCATTATTTCCATCTACATTTGAAGCACTCCCACACAC 719
||||||||||||||||||||||||||||||| |||| ||||||||| || | |||||||
Sbjct 453 GTCGTCTTGCTCATCTACGGCCTCATTATTTTCATCAACATTTGAAACATTATCACACAC 394
Query 720 ACGGT-A-----A-C-TC-TCACCATCG-GTCCTAGGGACAGT-ATTCCCGAGTG-CTT- 766
||||| | | | || ||||||| | ||||||| || | | ||||||||||| |||
Sbjct 393 ACGGTCACTTTCAGCATCGTCACCAT-GAGTCCTAGAGATA-TCATTCCCGAGTGTCTTG 336
Query 767 ----T-GAAA-GA----GACAAACAAGGTGACACTAGGATCCCCACCACGAATGAAAAAT 816
| | || || |||||||||| ||| | ||||| || ||||||||| |||||
Sbjct 335 ACGGTTGTAATGAAAAAGACAAACAAGTTGAGAGAAGGATACCGACCACGAATCAAAAAG 276
Query 817 --C--AT----------TTGATTGTCAATGTATACAGGAGGGCGTTTACTTTCTATCATC 862
| || |||| |||||||||| | ||||||||||||| | ||||| |||
Sbjct 275 AACGTATCCAACCCCACTTGACTGTCAATGTAGATAGGAGGGCGTTTAGTATCTATAATC 216
Query 863 ACTGACATCTTTCCCGGCATCCAGTAACTAATTAT-TGGATTG 904
||| |||||||||||| |||| ||||||||||||| || ||||
Sbjct 215 ACTAACATCTTTCCCGACATCGAGTAACTAATTATGTG-ATTG 174
Score = 106 bits (57), Expect = 4e-22
Identities = 96/113 (85%), Gaps = 9/113 (8%)
Strand=Plus/Minus
Query 370 TGTACGTACATTGGTACAAACCATGTTGACACGTACGTCTTGGAGTCACCGTTGGTGTAC 429
|||||||||||||||||||||||||||||||| ||| |||||||||||| | ||||||||
Sbjct 844 TGTACGTACATTGGTACAAACCATGTTGACACATACTTCTTGGAGTCACAGCTGGTGTAC 785
Query 430 GGTCAACC--G--A-----GTTATCTCCCCCAGGTACACGATGACTTGTGTAC 473
||||| || | | ||||||||| |||||||||| ||||||||||||
Sbjct 784 GGTCACCCAAGTGAAAAAAGTTATCTCCGTCAGGTACACGCTGACTTGTGTAC 732
> AT3G59860.1 | Symbols: | transposable element gene | chr3:22113851-22114908
REVERSE LENGTH=1058
Length=1058
Score = 427 bits (231), Expect = 8e-119
Identities = 275/297 (93%), Gaps = 0/297 (0%)
Strand=Plus/Minus
Query 1 TCATACGATGTGATTTTGAAACATTCTGAATTCTTGACAACTTGAGCTGTCAAATGCCAT 60
|||||||||||||||||||||||||||||||||||||| |||||||| |||||||| |||
Sbjct 1045 TCATACGATGTGATTTTGAAACATTCTGAATTCTTGACGACTTGAGCAGTCAAATGTCAT 986
Query 61 GGACAAGTATCATCAACGCAGACCATCTCCAATCTTGTAGGACATGACCTACGTTGCTTG 120
||||||||||||||||||| | |||| |||||||||||||| |||||||| |||||||
Sbjct 985 AGACAAGTATCATCAACGCATATCATCACCAATCTTGTAGGATATGACCTAGGTTGCTTA 926
Query 121 TAGCAAAAGCATTGTTTGATTGCGAGATAAGACATTGTTTGTTGTATGACTTTTCTGTTC 180
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 925 TAGCAAAAAAATTGTTTGATTGCGAGATAAGACATTGTTTGTTGTATGACTTTTCTGTTC 866
Query 181 TTAAAAACACTCTCCAATCTGTAGTGTACGTACATTGGTACAAACCATGTTGACACGTAC 240
|||||||||||||||||||| || ||||||||||||||||||||||||||||||| |||
Sbjct 865 TTAAAAACACTCTCCAATCTATATTGTACGTACATTGGTACAAACCATGTTGACAAATAC 806
Query 241 GTCTTGGAGTCACCGTTGGTGTACGGTCACCCGAATGAGAAATGTTATCTCCGCCAG 297
|||||||||||| ||||||||||||||||| ||||||||||||||||||||||
Sbjct 805 TTCTTGGAGTCACAACTGGTGTACGGTCACCCGGGTGAGAAATGTTATCTCCGCCAG 749
Score = 255 bits (138), Expect = 4e-67
Identities = 321/401 (80%), Gaps = 46/401 (11%)
Strand=Plus/Minus
Query 541 TAGGATCGAGGGTACTTcccccccATAGATCCATCATCACCCTGATAATCATCATACCCA 600
||||||||| ||||||| |||||||||||||||| ||||||||||||||||||||||||
Sbjct 565 TAGGATCGATGGTACTT--CCCCCATAGATCCATCGTCACCCTGATAATCATCATACCCA 508
Query 601 GCACCATCTTCGTTGTCCTCCTCCTCTTCTTCATCCTCATCTGTTTTATCGTCTTCAACG 660
|||||||||||||| |||| ||| ||||||||||||||||||||||||||||||| |
Sbjct 507 TCACCATCTTCGTTG---TCCT-CTCATCTTCATCCTCATCTGTTTTATCGTCTTCAATG 452
Query 661 TCGTCTTGCTCATCTACGGCCTCATTATTTCCATCTACATTTGAAGCACTCCCACACACA 720
|||||||||| |||||||| |||||||||| |||| ||||| || |||| ||||||||
Sbjct 451 TCGTCTTGCTAATCTACGGTCTCATTATTTTCATCAACATTAAAA-CACTATCACACACA 393
Query 721 CGGT-A-----A-C-TC-TCACCATCG-GTCCTAGGGACAGTATTCCCGAGTG------C 764
| || | | | || ||||||| | ||||||| |||| |||| ||||||| |
Sbjct 392 CAGTCACTTTCAGCATCGTCACCAT-GAGTCCTAGAGACATTATTTCCGAGTGTATTGAC 334
Query 765 --TT-T---GAAAGAGACAAACAAGGTGACACTAGGATCCCCACCACGAATGAAAAA--T 816
|| | |||||||||||||||| ||| | ||||| |||||||||||| ||||| |
Sbjct 333 GGTTGTAATGAAAGAGACAAACAAGTTGAGAGAAGGATACCCACCACGAATAAAAAAAAT 274
Query 817 C--AT-------T---T-GATTGTCAATGTATACAGGAGGGCGTTTACTTTCTATCATCA 863
| || | | || |||||||||| ||||||||||||||| | |||| ||| |
Sbjct 273 CGTATCCCACCCTCACTTGACTGTCAATGTAGACAGGAGGGCGTTTAGTATCTA-CATAA 215
Query 864 CTGACATCTTTCCCGGCATCCAGTAACTAATTATTGGATTG 904
|| ||||| |||||| |||||||||||||| || ||||||
Sbjct 214 CTAACATCACTCCCGGTATCCAGTAACTAATCATGGGATTG 174
Score = 97.1 bits (52), Expect = 3e-19
Identities = 62/67 (93%), Gaps = 0/67 (0%)
Strand=Plus/Minus
Query 474 TGAGAATGACGTCCTCCTCAACATTCCCTATTCCATATTCTTCAATAATTAAATCGTTCC 533
|||||||||||| |||||||||||||||||||||||||||||| | |||| ||||||||
Sbjct 673 TGAGAATGACGTTCTCCTCAACATTCCCTATTCCATATTCTTCTACAATTTCATCGTTCC 614
Query 534 ACTTGTT 540
|||||||
Sbjct 613 ACTTGTT 607
Score = 89.8 bits (48), Expect = 4e-17
Identities = 94/114 (82%), Gaps = 11/114 (10%)
Strand=Plus/Minus
Query 370 TGTACGTACATTGGTACAAACCATGTTGACACGTACGTCTTGGAGTCACCGTTGGTGTAC 429
||||||||||||||||||||||||||||||| ||| |||||||||||| ||||||||
Sbjct 841 TGTACGTACATTGGTACAAACCATGTTGACAAATACTTCTTGGAGTCACAACTGGTGTAC 782
Query 430 GGTCAACCG----AG---T-T-ATCTCCCCCAGGTACACGA-TGACTTGTGTAC 473
||||| ||| || | | |||||| |||||||||| | |||||||| |||
Sbjct 781 GGTCACCCGGGTGAGAAATGTTATCTCCGCCAGGTACAC-ACTGACTTGTCTAC 729
> AT5G28637.1 | Symbols: | transposable element gene | chr5:10645026-10646093
REVERSE LENGTH=1068
Length=1068
Score = 416 bits (225), Expect = 2e-115
Identities = 274/298 (92%), Gaps = 2/298 (1%)
Strand=Plus/Minus
Query 1 TCATACGATGTGATTTTGAAACATTCTGAATTCTTGACAACTTGAGCTGTCAAATGCCAT 60
||||| ||||| |||||||||||||||||||||||||| |||||||| |||||||| |||
Sbjct 1055 TCATAGGATGTAATTTTGAAACATTCTGAATTCTTGACGACTTGAGCAGTCAAATGTCAT 996
Query 61 GGACAAGTATCATCAACGCAGACCATCTCCAATCTTGTAGGACATGACCTACGTTGCTTG 120
|||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||
Sbjct 995 GGACAAGTATCATCAACGCATACCATCTCCAATCTTGTAGGACATGACCTAGGTTGCTTG 936
Query 121 TAGCAAAAGCATTGTTTGATTGCGAGATAAGACATTGTTTGTTGTATGACTTTTCTGTTC 180
|||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 935 TAGCAAAAAAATTGTTTGATTGTGAGATAAGACATTGTTTGTTGTATGACTTTTCTGTTG 876
Query 181 TTAAAAACACTCTCC-AATCTGTAGTGTACGTACATTGGTACAAACCATGTTGACACGTA 239
||||||||||| ||| ||||| |||| || ||||||||||||||||||||||||||| ||
Sbjct 875 TTAAAAACACT-TCCCAATCTATAGTATATGTACATTGGTACAAACCATGTTGACACATA 817
Query 240 CGTCTTGGAGTCACCGTTGGTGTACGGTCACCCGAATGAGAAATGTTATCTCCGCCAG 297
| ||||||||| || | |||||||||||||||||| |||||||| ||||||||| |||
Sbjct 816 CTTCTTGGAGTTACAGCTGGTGTACGGTCACCCGAGTGAGAAATATTATCTCCGTCAG 759
Score = 254 bits (137), Expect = 1e-66
Identities = 325/407 (80%), Gaps = 48/407 (12%)
Strand=Plus/Minus
Query 541 TAGGATCGAGGGTACTT------cccccccATAGATCCATCATCACCCTGATAATCATCA 594
||||||||||||||||| |||||||||||||||||| | ||||||||||||||||
Sbjct 575 TAGGATCGAGGGTACTTCCCCCCCCCCCCCATAGATCCATCGTTACCCTGATAATCATCA 516
Query 595 TACCCAGCACCATCTTCGTTGTCCTCCTCCTCTTCTTCATCCTCATCTGTTTTATCGTCT 654
|||||| |||| ||||| |||| | || |||| |||||||||||||||||||||||||||
Sbjct 515 TACCCATCACCGTCTTCATTGT-C-CC-CCTCCTCTTCATCCTCATCTGTTTTATCGTCT 459
Query 655 TCAACGTCGTCTTGCTCATCTACGGCCTCATTATTTCCATCTA-CATTTGAAGCACTCCC 713
||||||||||||| |||||||| ||||||||||||| ||| || ||||||||||||| |
Sbjct 458 TCAACGTCGTCTTCCTCATCTATGGCCTCATTATTTTCAT-TAACATTTGAAGCACTATC 400
Query 714 ACACACACGGT-A-----A-C-TC-TCACCATCG-GTCCTAGGGACAGTATTCCCGAGTG 763
||||||||||| | | | || ||||||| | ||||||| |||| ||||||||||||
Sbjct 399 ACACACACGGTCACTTTCAGCATCGTCACCAT-GAGTCCTAGAGACATTATTCCCGAGTG 341
Query 764 -CTT-----T-G-AA--A--GAGACAAACAAGGTGACACTAGGATCCCCACCACGAATGA 811
||| | | || | |||||||||||| ||| | ||||| || ||||||||| |
Sbjct 340 TCTTGACGGTTGTAATGAAAGAGACAAACAAGTTGAGAGAAGGATACCGACCACGAATCA 281
Query 812 AAAA-----T--C-A-T-----TTGATTGTCAATGTATACAGGAGGGCGTTTACTTTCTA 857
|||| | | | | |||| | |||||| | ||| ||||||||| | | ||||
Sbjct 280 AAAAGAACGTATCCAATCCCACTTGACTATCAATGAAGACAAGAGGGCGTTGAGTATCTA 221
Query 858 TCATCACTGACATCTTTCCCGGCATCCAGTAACTAATTATTGGATTG 904
|||| ||| |||||| ||||| |||| ||||||||||||| ||||||
Sbjct 220 TCATGACTAACATCTCTCCCGACATCTAGTAACTAATTATGGGATTG 174
Score = 97.1 bits (52), Expect = 3e-19
Identities = 62/67 (93%), Gaps = 0/67 (0%)
Strand=Plus/Minus
Query 474 TGAGAATGACGTCCTCCTCAACATTCCCTATTCCATATTCTTCAATAATTAAATCGTTCC 533
|||||||||||| |||||||||||||||||||||||||||||| | || || ||||||||
Sbjct 683 TGAGAATGACGTTCTCCTCAACATTCCCTATTCCATATTCTTCTACAACTACATCGTTCC 624
Query 534 ACTTGTT 540
|||||||
Sbjct 623 ACTTGTT 617
> AT1G32505.1 | Symbols: | transposable element gene | chr1:11753254-11754123
FORWARD LENGTH=870
Length=870
Score = 346 bits (187), Expect = 2e-94
Identities = 227/246 (92%), Gaps = 4/246 (2%)
Strand=Plus/Minus
Query 54 ATGCCATGGACAAGTATCATCAACGCAGACCATCTCCAATCTTGTAGGACATGACCTACG 113
||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
Sbjct 870 ATGTCATGGACAAGTATCATCAACGCAAACCATCTCCAATCTTGTAGGACATGACCTAGG 811
Query 114 TTGCTTGTAGC-AAAAGCATTGTTTGATTGCGAGATAAGACATTGTTTGTTGTATGACTT 172
||||||||||| ||||| ||||||||||||| ||||||||||||||||||||||||||||
Sbjct 810 TTGCTTGTAGCAAAAAG-ATTGTTTGATTGCAAGATAAGACATTGTTTGTTGTATGACTT 752
Query 173 TTCTGTTCTTAAAAACACTCTCC-AATCTGTAGTGTACGTACATTGGTACAAACCATGTT 231
||||||| ||||||||||| ||| ||||| ||||||||||||| ||||||||||||||||
Sbjct 751 TTCTGTTTTTAAAAACACT-TCCCAATCTATAGTGTACGTACAATGGTACAAACCATGTT 693
Query 232 GACACGTACGTCTTGGAGTCACCGTTGGTGTACGGTCACCCGAATGAGAAATGTTATCTC 291
||||| ||| |||||||||||| ||||||| |||||||||| |||||||||||||||
Sbjct 692 GACACATACTTCTTGGAGTCACAACTGGTGTATGGTCACCCGAGTGAGAAATGTTATCTT 633
Query 292 CGCCAG 297
||||||
Sbjct 632 CGCCAG 627
Score = 322 bits (174), Expect = 4e-87
Identities = 323/389 (83%), Gaps = 33/389 (8%)
Strand=Plus/Minus
Query 541 TAGGATCGAGGGTACTTcccccccATAGATCCATCATCACCCTGATAATCATCATACCCA 600
||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||
Sbjct 443 TAGGATCGAGGGTACTT-TCCCCCATAGATCCATCGTCACCCTGATAATCATCATACCCA 385
Query 601 GCACCATCTTCGTTGTCCTCCTCCTCTTCTTCATCCTCATCTGTTTTATCGTCTTCAACG 660
||||||||| ||||| | || |||| |||||||||||||||||||||||||||||||||
Sbjct 384 TCACCATCTTTGTTGT-C-CC-CCTCCTCTTCATCCTCATCTGTTTTATCGTCTTCAACG 328
Query 661 TCGTCTTGCTCATCTACGGCCTCATTATTTCCATCTACATTTGAAGCACTCCCACACACA 720
||||||||||||||||||| |||||||||| |||| ||||||||| |||| ||||||||
Sbjct 327 TCGTCTTGCTCATCTACGGTCTCATTATTTTCATCAACATTTGAAACACTATCACACACA 268
Query 721 CGGT-A-----A-C-TC-TCACCATCG-GTCCTAGGGACAGTATTCCCGAGTG-CTTTGA 769
|||| | | | || ||||||| | |||||| |||| |||||||||||| ||| ||
Sbjct 267 CGGTCACTTTCAGCATCGTCACCAT-GAGTCCTAAAGACATTATTCCCGAGTGTCTT-GA 210
Query 770 AAGAGACAAACAAGGTGACACTAGGATCCCCACCACGAATGAAAAAT--C--AT------ 819
| |||||||||| ||| | ||||| || ||||||||| ||||| | ||
Sbjct 209 C-G-GACAAACAAGTTGAGAGAAGGATACCGACCACGAATCAAAAAGAACGTATCCAACC 152
Query 820 ----TTGATTGTCAATGTATACAGGAGGGCGTTTACTTTCTATCATCACTGACATCTTTC 875
|||| |||||||||| |||||| | |||||| | |||||||||||| |||||| ||
Sbjct 151 CCACTTGACTGTCAATGTAGACAGGAAGACGTTTAGTATCTATCATCACTAACATCTCTC 92
Query 876 CCGGCATCCAGTAACTAATTATTGGATTG 904
| |||||||||||||||||||| ||||||
Sbjct 91 CTGGCATCCAGTAACTAATTATGGGATTG 63
> AT5G03950.1 | Symbols: | transposable element gene | chr5:1066206-1066964
FORWARD LENGTH=759
Length=759
Score = 302 bits (163), Expect = 5e-81
Identities = 327/399 (82%), Gaps = 39/399 (10%)
Strand=Plus/Minus
Query 541 TAGGATCGAGGGTACTTcccccccATAGATCCATCATCACCCTGATAATCATCATACCCA 600
||||||||||||||||| ||||| ||||||||||| ||||||||||||||||||||||||
Sbjct 490 TAGGATCGAGGGTACTT-CCCCCTATAGATCCATCGTCACCCTGATAATCATCATACCCA 432
Query 601 GCACCATCTTCGTTGTCCTCCTCCTCTTCTTCATCCTCATCTGTTTTATCGTCTTCAACG 660
||| || |||||||||| |||||||||| |||||||| |||||||||||||||| ||
Sbjct 431 CCACGATATTCGTTGTCCCCCTCCTCTTC---ATCCTCATTTGTTTTATCGTCTTCATCG 375
Query 661 TCGTCTTGCTCATCTACGGCCTCATTATTTCCATCTACATTTGAAGCACTCCCACACACA 720
|||||||||||||||||||||||||||||| |||| ||||||||| |||| |||| |||
Sbjct 374 TCGTCTTGCTCATCTACGGCCTCATTATTTTCATCAACATTTGAAACACTATCACATACA 315
Query 721 CGGTAACTCTCA-C--CATC-----G-GTCCTAGGGACAGTATTCCCGAGTG-CTT---- 766
|||||||| ||| | |||| | ||||||| |||| ||||| |||||| |||
Sbjct 314 CGGTAACTTTCAGCATCATCACCATGAGTCCTAGAGACATTATTCTCGAGTGTCTTGACG 255
Query 767 -T-G-AA--A--GAGACAAACAAGGTGACACTAGGATCCCCACCACGAATGAAAAAT--C 817
| | || | |||||||||||| ||| | ||||| || ||||||||| ||||| |
Sbjct 254 GTTGTAATGAAAGAGACAAACAAGTTGAGAGAAGGATACCGACCACGAATTAAAAAGAAC 195
Query 818 --AT----------TTGATTGTCAATGTATACAGGAGGGCGTTTACTTTCTATCATCACT 865
|| |||| |||||||||| ||||||||||||||| | ||||||||||||
Sbjct 194 GTATCCAACCCCACTTGACTGTCAATGTAGACAGGAGGGCGTTTAGTATCTATCATCACT 135
Query 866 GACATCTTTCCCGGCATCCAGTAACTAATTATTGGATTG 904
|||||| |||||||||||||||||||||||| ||||||
Sbjct 134 AACATCTCTCCCGGCATCCAGTAACTAATTATGGGATTG 96
Score = 102 bits (55), Expect = 5e-21
Identities = 63/67 (94%), Gaps = 0/67 (0%)
Strand=Plus/Minus
Query 474 TGAGAATGACGTCCTCCTCAACATTCCCTATTCCATATTCTTCAATAATTAAATCGTTCC 533
|||||||||||| |||||||||||||||||||||||||||||| | ||||| ||||||||
Sbjct 598 TGAGAATGACGTTCTCCTCAACATTCCCTATTCCATATTCTTCTACAATTACATCGTTCC 539
Query 534 ACTTGTT 540
|||||||
Sbjct 538 ACTTGTT 532
> AT1G55400.1 | Symbols: | transposable element gene | chr1:20684233-20684965
REVERSE LENGTH=733
Length=733
Score = 302 bits (163), Expect = 5e-81
Identities = 321/391 (82%), Gaps = 35/391 (9%)
Strand=Plus/Minus
Query 541 TAGGATCGAGGGTACTTcccccccATAGATCCATCATCACCCTGATAATCATCATACCCA 600
||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||
Sbjct 556 TAGGATCGAGGGTACTT-CCCCCCATAGATCCATCGTCACCCTGATAATCATCATACCCA 498
Query 601 GCACCATCTTCGTTGTCCTCCTCCTCTTCTTCATCCTCATCTGTTTTATCGTCTTCAACG 660
||||||||||||||| | || |||| ||||||||||||||||||||||||||||||||
Sbjct 497 TCACCATCTTCGTTGT-C-CC-CCTCCTCTTCATCCTCATCTGTTTTATCGTCTTCAACA 441
Query 661 TCGTCTTGCTCATCTACGGCCTCATTATTTCCATCTACATTTGAAGCACTCCCACACACA 720
|||||||||||||||||||||||||||||| |||| ||||||||| ||| ||| ||
Sbjct 440 TCGTCTTGCTCATCTACGGCCTCATTATTTTCATCAACATTTGAAACACGGTCACTTTCA 381
Query 721 CGGTAACTCTCACCATCG-GTCCTAGGGACAGTATTCCCGAGTG-CTT-----T-G-AA- 770
| | | ||||||| | ||||||| |||| ||||| |||||| ||| | | ||
Sbjct 380 -GC-ATCG-TCACCAT-GAGTCCTAGAGACATTATTCTCGAGTGTCTTGACGGTTGTAAT 325
Query 771 -A--GAGACAAACAAGGTGACACTAGGATCCCCACCACGAATGA-AAA-ATC--ATT--- 820
| |||||||||||| ||| | ||||| || ||||||||| | ||| | | |||
Sbjct 324 GAAAGAGACAAACAAGTTGAGAGAAGGATACCTACCACGAATCATAAAGAACGTATTCAA 265
Query 821 ------T-GATTGTCAATGTATACAGGAGGGCGTTTACTTTCTATCATCACTGACATCTT 873
| || |||||||||| |||||| |||||||| | |||||||||||| ||||||
Sbjct 264 CCCCACTTGACTGTCAATGTAGACAGGAAGGCGTTTAGTATCTATCATCACTAACATCTC 205
Query 874 TCCCGGCATCCAGTAACTAATTATTGGATTG 904
|||||||||||||||||||||||| ||||||
Sbjct 204 TCCCGGCATCCAGTAACTAATTATGGGATTG 174
> AT5G44313.1 | Symbols: | transposable element gene | chr5:17851014-17851727
FORWARD LENGTH=714
Length=714
Score = 296 bits (160), Expect = 2e-79
Identities = 320/391 (82%), Gaps = 35/391 (9%)
Strand=Plus/Minus
Query 541 TAGGATCGAGGGTACTTcccccccATAGATCCATCATCACCCTGATAATCATCATACCCA 600
||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||
Sbjct 445 TAGGATCGAGGGTACTT-CCCCCCATAGATCCATCGTCACCCTGATAATCATCATACCCA 387
Query 601 GCACCATCTTCGTTGTCCTCCTCCTCTTCTTCATCCTCATCTGTTTTATCGTCTTCAACG 660
||||||||||||||| | || |||| |||||||||||||||||||||||||||||||||
Sbjct 386 TCACCATCTTCGTTGT-C-CC-CCTCCTCTTCATCCTCATCTGTTTTATCGTCTTCAACG 330
Query 661 TCGTCTTGCTCATCTACGGCCTCATTATTTCCATCTACATTTGAAGCACTCCCACACACA 720
|||||||||||||||||||||||||||||| |||| ||||||||| ||| ||| ||
Sbjct 329 TCGTCTTGCTCATCTACGGCCTCATTATTTTCATCAACATTTGAAACACGGTCACTTTCA 270
Query 721 CGGTAACTCTCACCATCG-GTCCTAGGGACAGTATTCCCGAGTG-CTT-----T-G-AA- 770
| | | ||| ||| | | ||||| |||| |||||| ||||| ||| | | ||
Sbjct 269 -GC-ATCA-TCATCAT-GAGCCCTAGAGACATTATTCCTGAGTGTCTTGACGGTTGTAAT 214
Query 771 -A--GAGACAAACAAGGTGACACTAGGATCCCCACCACGAATGA-AAA-A---T---CA- 818
| |||||||||||| ||| | ||||| || ||||||||| | ||| | | ||
Sbjct 213 GAAAGAGACAAACAAGTTGAGAGAAGGATACCTACCACGAATCATAAAGAACGTATTCAA 154
Query 819 -T----TTGATTGTCAATGTATACAGGAGGGCGTTTACTTTCTATCATCACTGACATCTT 873
| |||| |||||||||| ||||||||||||||| | |||||||||||| ||||||
Sbjct 153 CTCCACTTGACTGTCAATGTAGACAGGAGGGCGTTTAGTATCTATCATCACTAACATCTC 94
Query 874 TCCCGGCATCCAGTAACTAATTATTGGATTG 904
|| |||||||||||||||||||| ||||||
Sbjct 93 TCTGGGCATCCAGTAACTAATTATGGGATTG 63
Score = 100 bits (54), Expect = 2e-20
Identities = 62/66 (94%), Gaps = 0/66 (0%)
Strand=Plus/Minus
Query 474 TGAGAATGACGTCCTCCTCAACATTCCCTATTCCATATTCTTCAATAATTAAATCGTTCC 533
|||||||||||| |||||||||||||||||||||||||||||| | ||||| ||||||||
Sbjct 553 TGAGAATGACGTTCTCCTCAACATTCCCTATTCCATATTCTTCTACAATTACATCGTTCC 494
Query 534 ACTTGT 539
||||||
Sbjct 493 ACTTGT 488
> AT5G27590.1 | Symbols: | transposable element gene | chr5:9738492-9740473
REVERSE LENGTH=963
Length=963
Score = 291 bits (157), Expect = 1e-77
Identities = 320/392 (82%), Gaps = 37/392 (9%)
Strand=Plus/Minus
Query 541 TAGGATCGAGGGTACTTcccccccATAGATCCATCATCACCCTGATAATCATCATACCCA 600
||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||
Sbjct 556 TAGGATCGAGGGTACTT-CCCCCCATAGATCCATCGTCACCCTGATAATCATCATACCCA 498
Query 601 GCACCATCTTCGTTGTCCTCC-TCCTCTTCTTCATCCTCATCTGTTTTATCGTCTTCAAC 659
||||||||||||| ||| || | | ||| ||||||||||||||||||||||||||||||
Sbjct 497 TCACCATCTTCGTTATCC-CCAT-C-CTT-TTCATCCTCATCTGTTTTATCGTCTTCAAC 442
Query 660 GTCGTCTTGCTCATCTACGGCCTCATTATTTCCATCTACATTTGAAGCACTCCCACACAC 719
|||||||||||||| |||||||||||||||| |||| ||||||||| ||| ||| |
Sbjct 441 GTCGTCTTGCTCATATACGGCCTCATTATTTTCATCAACATTTGAAACACGGTCACTTTC 382
Query 720 ACGGTAACTCTCACCATCG-GTCCTAGGGACAGTATTCCCGAGTG-CTT-----T-G-AA 770
| | | | ||||||| | ||||||| |||| ||||| ||||| ||| | | ||
Sbjct 381 A-GC-ATCG-TCACCAT-GAGTCCTAGAGACATTATTCTTGAGTGTCTTGACGGTTGTAA 326
Query 771 -A---GAGACAAACAAGGTGACACTAGGATCCCCACCACGAATGA-AAA-ATC--ATT-- 820
| |||||||||||| ||| | ||||| || ||||||||| | ||| | | |||
Sbjct 325 TAAAAGAGACAAACAAGTTGAGAGAAGGATACCTACCACGAATCATAAAGAACGTATTCA 266
Query 821 -------T-GATTGTCAATGTATACAGGAGGGCGTTTACTTTCTATCATCACTGACATCT 872
| || |||||||||| ||||||||||||||| | |||||||||||| ||||||
Sbjct 265 ACCCCACTTGACTGTCAATGTAGACAGGAGGGCGTTTAGTATCTATCATCACTAACATCT 206
Query 873 TTCCCGGCATCCAGTAACTAATTATTGGATTG 904
|||||||||||||||||||||||| ||||||
Sbjct 205 CTCCCGGCATCCAGTAACTAATTATGGGATTG 174
Score = 102 bits (55), Expect = 5e-21
Identities = 63/67 (94%), Gaps = 0/67 (0%)
Strand=Plus/Minus
Query 474 TGAGAATGACGTCCTCCTCAACATTCCCTATTCCATATTCTTCAATAATTAAATCGTTCC 533
|||||||||||| |||||||||||||||||||||||||||||| | ||||| ||||||||
Sbjct 664 TGAGAATGACGTTCTCCTCAACATTCCCTATTCCATATTCTTCTACAATTACATCGTTCC 605
Query 534 ACTTGTT 540
|||||||
Sbjct 604 ACTTGTT 598
> AT1G17900.1 | Symbols: | transposable element gene | chr1:6157368-6158130
REVERSE LENGTH=763
Length=763
Score = 291 bits (157), Expect = 1e-77
Identities = 319/391 (82%), Gaps = 35/391 (9%)
Strand=Plus/Minus
Query 541 TAGGATCGAGGGTACTTcccccccATAGATCCATCATCACCCTGATAATCATCATACCCA 600
||||||||||||||||| |||||||||||| |||| ||||||||||||||||||||||||
Sbjct 557 TAGGATCGAGGGTACTT-CCCCCCATAGATTCATCGTCACCCTGATAATCATCATACCCA 499
Query 601 GCACCATCTTCGTTGTCCTCCTCCTCTTCTTCATCCTCATCTGTTTTATCGTCTTCAACG 660
||||||||||||||||| ||| | ||| ||||||||||||||||||||||||||||| |
Sbjct 498 TCACCATCTTCGTTGTCCCCCT-C-CTT-TTCATCCTCATCTGTTTTATCGTCTTCAATG 442
Query 661 TCGTCTTGCTCATCTACGGCCTCATTATTTCCATCTACATTTGAAGCACTCCCACACACA 720
| |||||||||||||||||||||||||||| |||| ||||||||| ||| ||| ||
Sbjct 441 TTGTCTTGCTCATCTACGGCCTCATTATTTTCATCAACATTTGAAACACGGTCACTTTCA 382
Query 721 CGGTAACTCTCACCATCG-GTCCTAGGGACAGTATTCCCGAGTG-CTT-----T-G-AA- 770
| | | ||||||| | ||||||| |||| |||| ||||||| ||| | | ||
Sbjct 381 -GC-ATCG-TCACCAT-GAGTCCTAGAGACATTATTTCCGAGTGTCTTGACGGTTGTAAT 326
Query 771 -A--GAGACAAACAAGGTGACACTAGGATCCCCACCACGAATGAAAAAT--C--ATT--- 820
| |||||||||||| ||| | ||||| || ||||||||| ||||| | |||
Sbjct 325 GAAAGAGACAAACAAGTTGAGAGAAGGATACCTACCACGAATTAAAAAGAACGTATTCAA 266
Query 821 ------T-GATTGTCAATGTATACAGGAGGGCGTTTACTTTCTATCATCACTGACATCTT 873
| || |||||||||| ||||||||||||||| | |||||||||||| ||||||
Sbjct 265 CCCCACTTGACTGTCAATGTAGACAGGAGGGCGTTTAGTATCTATCATCACTAACATCTC 206
Query 874 TCCCGGCATCCAGTAACTAATTATTGGATTG 904
|||||| ||||||||||||||||| ||||||
Sbjct 205 TCCCGGAATCCAGTAACTAATTATGGGATTG 175
> AT4G05584.1 | Symbols: | transposable element gene | chr4:2864901-2865581
FORWARD LENGTH=681
Length=681
Score = 222 bits (120), Expect = 4e-57
Identities = 169/191 (88%), Gaps = 9/191 (5%)
Strand=Plus/Minus
Query 1 TCATACGATGTGATTTTGAAACATTCTGAATTCTTGACAACTTGAGCTGTCAAATGCCAT 60
|||||| |||||||||||||||||||||| |||||||| |||||||| |||||||| ||
Sbjct 345 TCATACTATGTGATTTTGAAACATTCTGAGTTCTTGACGACTTGAGCAGTCAAATGTAAT 286
Query 61 GGACAAGTATCATCAACGCAGACCATCTCCAATCTTGTAGGACATGACCTACGTTGCTTG 120
|||||||||||||||| ||| || ||||||||||||||||| |||| || |||
Sbjct 285 GGACAAGTATCATCAATGCAAACTATCTCCAATCTTGTAGGCCATG----AC----CTTA 234
Query 121 TAGCAAAAGCATTGTTTGATTGCGAGAT-AAGACATTGTTTGTTGTATGACTTTTCTGTT 179
||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 233 TAGCAAAAGTATTGTTTGATTGCGAGATAAAGACATTGTTTGTTGTATGACTTTTCTGTT 174
Query 180 CTTAAAAACAC 190
|||| ||||||
Sbjct 173 CTTAGAAACAC 163
> AT3G45120.1 | Symbols: | transposable element gene | chr3:16511730-16512050
REVERSE LENGTH=321
Length=321
Score = 193 bits (104), Expect = 3e-48
Identities = 138/154 (90%), Gaps = 3/154 (2%)
Strand=Plus/Minus
Query 585 ATAATCATCATACCCAGCACCATCTTCGTTGTCCTCCTCCTCTTCTTCATCCTCATCTGT 644
|||| ||||||||||| ||||||||||||||| | || |||| |||||||||||||||||
Sbjct 318 ATAAGCATCATACCCATCACCATCTTCGTTGT-C-CC-CCTCCTCTTCATCCTCATCTGT 262
Query 645 TTTATCGTCTTCAACGTCGTCTTGCTCATCTACGGCCTCATTATTTCCATCTACATTTGA 704
|||||||||||||||||||||||||||||||||| ||||||||||| |||| ||||||||
Sbjct 261 TTTATCGTCTTCAACGTCGTCTTGCTCATCTACGACCTCATTATTTTCATCAACATTTGA 202
Query 705 AGCACTCCCACACACACGGTAACTCTCACCATCG 738
| |||| ||||||||| || ||| ||| |||||
Sbjct 201 AACACTATCACACACACAGTCACTTTCAGCATCG 168
> AT2G16820.1 | Symbols: | transposable element gene | chr2:7290104-7290952
REVERSE LENGTH=606
Length=606
Score = 176 bits (95), Expect = 3e-43
Identities = 117/127 (92%), Gaps = 4/127 (3%)
Strand=Plus/Minus
Query 541 TAGGATCGAGGGTACTTcccccccATAGATCCATCATCACCCTGATAATCATCATACCCA 600
||||||||| || |||| | ||||||||||||||| ||||||||||||||||||||||||
Sbjct 333 TAGGATCGAAGGCACTT-CTCCCCATAGATCCATCGTCACCCTGATAATCATCATACCCA 275
Query 601 GCACCATCTTCGTTGTCCTCCTCCTCTTCTTCATCCTCATCTGTTTTATCGTCTTCAACG 660
||||||||||||||| | || |||| |||||||||||||||||||||||||||||||||
Sbjct 274 TCACCATCTTCGTTGT-C-CC-CCTCCTCTTCATCCTCATCTGTTTTATCGTCTTCAACG 218
Query 661 TCGTCTT 667
|||||||
Sbjct 217 TCGTCTT 211
> AT4G05583.2 | Symbols: | transposable element gene | chr4:2860476-2861486
FORWARD LENGTH=1011
Length=1011
Score = 130 bits (70), Expect = 2e-29
Identities = 78/82 (95%), Gaps = 0/82 (0%)
Strand=Plus/Minus
Query 109 CTACGTTGCTTGTAGCAAAAGCATTGTTTGATTGCGAGATAAGACATTGTTTGTTGTATG 168
||| ||||||| |||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 244 CTAGGTTGCTTATAGCAAAAGCATTGTTTGATTGCGAGATAAAACATTGTTTGTTGTATG 185
Query 169 ACTTTTCTGTTCTTAAAAACAC 190
||||||||||||||| ||||||
Sbjct 184 ACTTTTCTGTTCTTAGAAACAC 163
> AT3G42626.1 | Symbols: | transposable element gene | chr3:14717888-14720449
REVERSE LENGTH=2562
Length=2562
Score = 75.0 bits (40), Expect = 1e-12
Identities = 85/106 (80%), Gaps = 6/106 (6%)
Strand=Plus/Minus
Query 335 ACCTTCGC-TGCCTGTATCTTGTACACATTCTGTTATGTACGTACATTGGTACAAACCAT 393
|||||||| | | ||| || | | |||| || | |||||||||||||||||||||||||
Sbjct 656 ACCTTCGCAT-CTTGTCTCCTCTGCACAGACTCTAATGTACGTACATTGGTACAAACCAT 598
Query 394 GTTGACACGTACGTCT-TGGAGTCACCG-TTGGTGTACGGTCAACC 437
|||||||||| || ||||| || | ||||||||| |||||||
Sbjct 597 GTTGACACGT-CGGGGATGGAG-CAGAGATTGGTGTACTGTCAACC 554
Score = 65.8 bits (35), Expect = 7e-10
Identities = 57/67 (85%), Gaps = 4/67 (6%)
Strand=Plus/Minus
Query 205 TGTACGTACATTGGTACAAACCATGTTGACACGTACGTCT-TGGAGTCACCG-TTGGTGT 262
|||||||||||||||||||||||||||||||||| || ||||| || | |||||||
Sbjct 621 TGTACGTACATTGGTACAAACCATGTTGACACGT-CGGGGATGGAG-CAGAGATTGGTGT 564
Query 263 ACGGTCA 269
|| ||||
Sbjct 563 ACTGTCA 557
> AT2G06600.1 | Symbols: | transposable element gene | chr2:2639598-2642549
FORWARD LENGTH=2952
Length=2952
Score = 75.0 bits (40), Expect = 1e-12
Identities = 86/107 (80%), Gaps = 8/107 (7%)
Strand=Plus/Minus
Query 335 ACCTTCGC-TGCCTGTATCTTGTACACATTCTGTTA-TGTACGTACATTGGTACAAACCA 392
|||||||| | | ||| |||| | |||| || || |||||||||||||||||||||||
Sbjct 849 ACCTTCGCAT-CTTGTCTCTTCTGCACAGACT-CTAGTGTACGTACATTGGTACAAACCA 792
Query 393 TGTTGACACGTACGTCT-TGGAGTCACCG-TTGGTGTACGGTCAACC 437
||||||||||| || ||||| || | ||||||||| |||||||
Sbjct 791 TGTTGACACGT-CGGGGATGGAG-CAGAGGTTGGTGTACTGTCAACC 747
Score = 71.3 bits (38), Expect = 2e-11
Identities = 60/70 (86%), Gaps = 4/70 (6%)
Strand=Plus/Minus
Query 202 TAGTGTACGTACATTGGTACAAACCATGTTGACACGTACGTCT-TGGAGTCACCG-TTGG 259
||||||||||||||||||||||||||||||||||||| || ||||| || | ||||
Sbjct 817 TAGTGTACGTACATTGGTACAAACCATGTTGACACGT-CGGGGATGGAG-CAGAGGTTGG 760
Query 260 TGTACGGTCA 269
||||| ||||
Sbjct 759 TGTACTGTCA 750
> AT5G28487.1 | Symbols: | transposable element gene | chr5:10441691-10445995
REVERSE LENGTH=4305
Length=4305
Score = 71.3 bits (38), Expect = 2e-11
Identities = 60/70 (86%), Gaps = 4/70 (6%)
Strand=Plus/Minus
Query 370 TGTACGTACATTGGTACAAACCATGTTGACACGTACGTCT-TGGAGTCACCG-TTGGTGT 427
|||||||||||||||||||||||||||||||||| || ||||| || | |||||||
Sbjct 817 TGTACGTACATTGGTACAAACCATGTTGACACGT-CGGGGATGGAG-CAGAGGTTGGTGT 760
Query 428 ACGGTCAACC 437
|| |||||||
Sbjct 759 ACAGTCAACC 750
Score = 71.3 bits (38), Expect = 2e-11
Identities = 60/70 (86%), Gaps = 4/70 (6%)
Strand=Plus/Minus
Query 202 TAGTGTACGTACATTGGTACAAACCATGTTGACACGTACGTCT-TGGAGTCACCG-TTGG 259
||||||||||||||||||||||||||||||||||||| || ||||| || | ||||
Sbjct 820 TAGTGTACGTACATTGGTACAAACCATGTTGACACGT-CGGGGATGGAG-CAGAGGTTGG 763
Query 260 TGTACGGTCA 269
||||| ||||
Sbjct 762 TGTACAGTCA 753
> AT2G05490.1 | Symbols: | transposable element gene | chr2:2006873-2009701
REVERSE LENGTH=2829
Length=2829
Score = 71.3 bits (38), Expect = 2e-11
Identities = 60/70 (86%), Gaps = 4/70 (6%)
Strand=Plus/Minus
Query 370 TGTACGTACATTGGTACAAACCATGTTGACACGTACGTCT-TGGAGTCACCG-TTGGTGT 427
|||||||||||||||||||||||||||||||||| || ||||| || | |||||||
Sbjct 817 TGTACGTACATTGGTACAAACCATGTTGACACGT-CGGGGATGGAG-CAGAGGTTGGTGT 760
Query 428 ACGGTCAACC 437
|| |||||||
Sbjct 759 ACAGTCAACC 750
Score = 71.3 bits (38), Expect = 2e-11
Identities = 60/70 (86%), Gaps = 4/70 (6%)
Strand=Plus/Minus
Query 202 TAGTGTACGTACATTGGTACAAACCATGTTGACACGTACGTCT-TGGAGTCACCG-TTGG 259
||||||||||||||||||||||||||||||||||||| || ||||| || | ||||
Sbjct 820 TAGTGTACGTACATTGGTACAAACCATGTTGACACGT-CGGGGATGGAG-CAGAGGTTGG 763
Query 260 TGTACGGTCA 269
||||| ||||
Sbjct 762 TGTACAGTCA 753
> AT2G12150.1 | Symbols: | transposable element gene | chr2:4884407-4887236
REVERSE LENGTH=2830
Length=2830
Score = 71.3 bits (38), Expect = 2e-11
Identities = 60/70 (86%), Gaps = 4/70 (6%)
Strand=Plus/Minus
Query 370 TGTACGTACATTGGTACAAACCATGTTGACACGTACGTCT-TGGAGTCACCG-TTGGTGT 427
|||||||||||||||||||||||||||||||||| || ||||| || | |||||||
Sbjct 817 TGTACGTACATTGGTACAAACCATGTTGACACGT-CGGGGATGGAG-CAGAGGTTGGTGT 760
Query 428 ACGGTCAACC 437
|| |||||||
Sbjct 759 ACAGTCAACC 750
Score = 71.3 bits (38), Expect = 2e-11
Identities = 60/70 (86%), Gaps = 4/70 (6%)
Strand=Plus/Minus
Query 202 TAGTGTACGTACATTGGTACAAACCATGTTGACACGTACGTCT-TGGAGTCACCG-TTGG 259
||||||||||||||||||||||||||||||||||||| || ||||| || | ||||
Sbjct 820 TAGTGTACGTACATTGGTACAAACCATGTTGACACGT-CGGGGATGGAG-CAGAGGTTGG 763
Query 260 TGTACGGTCA 269
||||| ||||
Sbjct 762 TGTACAGTCA 753
> AT1G45070.1 | Symbols: | transposable element gene | chr1:17035871-17038630
FORWARD LENGTH=2760
Length=2760
Score = 71.3 bits (38), Expect = 2e-11
Identities = 60/70 (86%), Gaps = 4/70 (6%)
Strand=Plus/Minus
Query 370 TGTACGTACATTGGTACAAACCATGTTGACACGTACGTCT-TGGAGTCACCG-TTGGTGT 427
|||||||||||||||||||||||||||||||||| || ||||| || | |||||||
Sbjct 817 TGTACGTACATTGGTACAAACCATGTTGACACGT-CGGGGATGGAG-CAGAGGTTGGTGT 760
Query 428 ACGGTCAACC 437
|| |||||||
Sbjct 759 ACAGTCAACC 750
Score = 71.3 bits (38), Expect = 2e-11
Identities = 60/70 (86%), Gaps = 4/70 (6%)
Strand=Plus/Minus
Query 202 TAGTGTACGTACATTGGTACAAACCATGTTGACACGTACGTCT-TGGAGTCACCG-TTGG 259
||||||||||||||||||||||||||||||||||||| || ||||| || | ||||
Sbjct 820 TAGTGTACGTACATTGGTACAAACCATGTTGACACGT-CGGGGATGGAG-CAGAGGTTGG 763
Query 260 TGTACGGTCA 269
||||| ||||
Sbjct 762 TGTACAGTCA 753
> AT3G28110.1 | Symbols: | transposable element gene | chr3:10461763-10462827
FORWARD LENGTH=1065
Length=1065
Score = 69.4 bits (37), Expect = 5e-11
Identities = 37/37 (100%), Gaps = 0/37 (0%)
Strand=Plus/Minus
Query 202 TAGTGTACGTACATTGGTACAAACCATGTTGACACGT 238
|||||||||||||||||||||||||||||||||||||
Sbjct 820 TAGTGTACGTACATTGGTACAAACCATGTTGACACGT 784
Score = 65.8 bits (35), Expect = 7e-10
Identities = 60/71 (85%), Gaps = 6/71 (8%)
Strand=Plus/Minus
Query 370 TGTACGTACATTGGTACAAACCATGTTGACACGTACGTCT-TGGAGTCACCG-TTGGTGT 427
|||||||||||||||||||||||||||||||||| || ||||| || | |||||||
Sbjct 817 TGTACGTACATTGGTACAAACCATGTTGACACGT-CGGGGATGGAG-CAGAGGTTGGTGT 760
Query 428 ACG-GTCAACC 437
| | |||||||
Sbjct 759 A-GTGTCAACC 750
> AT2G16150.1 | Symbols: | transposable element gene | chr2:7009205-7011913
FORWARD LENGTH=2709
Length=2709
Score = 69.4 bits (37), Expect = 5e-11
Identities = 37/37 (100%), Gaps = 0/37 (0%)
Strand=Plus/Minus
Query 202 TAGTGTACGTACATTGGTACAAACCATGTTGACACGT 238
|||||||||||||||||||||||||||||||||||||
Sbjct 820 TAGTGTACGTACATTGGTACAAACCATGTTGACACGT 784
Score = 65.8 bits (35), Expect = 7e-10
Identities = 59/70 (84%), Gaps = 4/70 (6%)
Strand=Plus/Minus
Query 370 TGTACGTACATTGGTACAAACCATGTTGACACGTACGTCT-TGGAGTCACCG-TTGGTGT 427
|||||||||||||||||||||||||||||||||| || | ||| || | |||||||
Sbjct 817 TGTACGTACATTGGTACAAACCATGTTGACACGT-CGGGGATAGAG-CAGAGGTTGGTGT 760
Query 428 ACGGTCAACC 437
|| |||||||
Sbjct 759 ACAGTCAACC 750
> AT1G29075.1 | Symbols: | transposable element gene | chr1:10153543-10154701
FORWARD LENGTH=1159
Length=1159
Score = 65.8 bits (35), Expect = 7e-10
Identities = 35/35 (100%), Gaps = 0/35 (0%)
Strand=Plus/Minus
Query 202 TAGTGTACGTACATTGGTACAAACCATGTTGACAC 236
|||||||||||||||||||||||||||||||||||
Sbjct 819 TAGTGTACGTACATTGGTACAAACCATGTTGACAC 785
Score = 60.2 bits (32), Expect = 3e-08
Identities = 32/32 (100%), Gaps = 0/32 (0%)
Strand=Plus/Minus
Query 370 TGTACGTACATTGGTACAAACCATGTTGACAC 401
||||||||||||||||||||||||||||||||
Sbjct 816 TGTACGTACATTGGTACAAACCATGTTGACAC 785
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 44155815213
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5