BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg479996
Length=2193
Score E
Sequences producing significant alignments: (Bits) Value
AT3G24780.1 | Symbols: | Uncharacterised conserved protein UCP... 2656 0.0
AT5G13210.1 | Symbols: | Uncharacterised conserved protein UCP... 1308 0.0
AT5G43390.1 | Symbols: | Uncharacterised conserved protein UCP... 100 5e-20
> AT3G24780.1 | Symbols: | Uncharacterised conserved protein UCP015417,
vWA | chr3:9049446-9051593 FORWARD LENGTH=2148
Length=2148
Score = 2656 bits (1438), Expect = 0.0
Identities = 1747/1889 (92%), Gaps = 49/1889 (3%)
Strand=Plus/Plus
Query 1 ATGGCTTCTCAGTTCCCTGGTCCA-CACGAGATCCAAGACTCCAACGCTCCCCTCACAGC 59
|||||||||||||||||||||||| | ||||||||||||||||||||||||||||||| |
Sbjct 1 ATGGCTTCTCAGTTCCCTGGTCCATC-CGAGATCCAAGACTCCAACGCTCCCCTCACATC 59
Query 60 TTCTGGTCCCAGCAATCCAGTCAATACTTCACCTCCGATGGGACAGACCGAGGAAAGACC 119
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 60 TTCTGGTCCCACCAATCCAGTCAATACTTCACCTCCGATGGGACAGACCGAGGAAAGACC 119
Query 120 CCCCACGTACCTCGCCGCTCTCCTCAAAAACATCAACACTTGTCGTCCCAGCGTCCCAAA 179
|| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 120 CCACACGTACCTCGCCGCTCTCCTCAAGAACATCAACACTTGTCGTCCCAGCGTCCCAAA 179
Query 180 GGTCTCAAACGTCAAGAAATCAACTAAAGTCAACGTCAATCCTGTTAGACCGGTTCGACC 239
|||||||||| ||||||||||||||||||||||||||||||||||| | ||||
Sbjct 180 GGTCTCAAACATCAAGAAATCAACTAAAGTCAACGTCAATCCTGTT--A-------GACC 230
Query 240 TGTTAGGCCGGTTCGGCCTGTTAGACCGGTTAGACCTGTTAGACCGGTTAGACCTGTTAG 299
|||||| |||||||| ||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 231 TGTTAGACCGGTTCGACCTATTAGACCGGTTAGACCTGTTAGACCGGTTAGACCTGTTAG 290
Query 300 ACGGCGAAAAGTAGATTTAAACATATCTTCACCTGCGATGGGCTACACCGAGAATAGATC 359
|||||||| |||||||||||||| |||||||||||||||||||||||| |||||||||||
Sbjct 291 ACGGCGAAGAGTAGATTTAAACAAATCTTCACCTGCGATGGGCTACACTGAGAATAGATC 350
Query 360 CGCCACGTACCTCTCCTCAGGCAACCCCTGTCTCGACTTCTTCTTTCACGTTGTTCCTTC 419
|||||| |||||||||||||| |||||||| |||||||||||||||||| ||||||||||
Sbjct 351 CGCCACCTACCTCTCCTCAGGTAACCCCTGCCTCGACTTCTTCTTTCACATTGTTCCTTC 410
Query 420 CACGCCCAAGAAATCTCTGGAGCAGCGGCTAAAGGAGGCTTGGGACCATGATTCTTTAAC 479
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 411 CACGCCCAAGAAATCTCTGGAGCAGCGGCTAGAGGAGGCTTGGGACCATGATTCTTTAAC 470
Query 480 CACTCTCAAGCTTATCTGTAACCTTCGAGGAGTCCGTGGCACTGGAAAATCTGACAAGGA 539
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 471 CACTCTCAAGCTTATCTGTAACCTTCGTGGAGTCCGTGGCACTGGAAAATCTGACAAGGA 530
Query 540 AGGGTTTTACACGGCGGCGTTGTGGCTCCATAGTCGCCATCCGAAAACCCTAGCTTGTAA 599
||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||
Sbjct 531 AGGGTTTTACACGGCGGCGTTGTGGCTCCATGGTCGCCATCCCAAAACCCTAGCTTGTAA 590
Query 600 CCTCGAGTC-CATCTCCAAGTTTGGCTATTTTAAAGATTTTCAAGAGATTCTTTACCGGA 658
||||||||| | ||||||| |||||||||||||||||||||| ||||||||||||||||
Sbjct 591 CCTCGAGTCTC-TCTCCAAATTTGGCTATTTTAAAGATTTTCCGGAGATTCTTTACCGGA 649
Query 659 TTCTACAAGGATCTGAAATCCGCAGTATCCAGAAATCGGAATGGTACAAGACAATAGCCG 718
||||||||||| |||||||||||||||| |||||| || || ||||| | ||||||||||
Sbjct 650 TTCTACAAGGACCTGAAATCCGCAGTATACAGAAAACGCAAAGGTACGATACAATAGCCG 709
Query 719 CAGCAAT-TCTTCGTAGAAGATCCAAATTCTCGAGAGGCGGTCGTGGTGTTGGCCGTGGT 777
|||| || ||| |||||||||||| ||||| ||| | || | | | ||||||
Sbjct 710 CAGC-ATCTCTACGTAGAAGATCCCGTTTCTCTAGA----G--GT-G-G-T---CGTGGT 756
Query 778 TTTGGTCGTGGTCGTGGAAGGGGTCGCGGAATGGTTCGTCGTGGTCTTAAAAGGCCGGCA 837
|||||| |||||||| | |||||| | | | || | | | | |||||| |||||
Sbjct 757 TTTGGTGGTGGTCGTAGTAGGGGT--C-G--TCATT--T--T--T-TAAAAAGGTCGGCA 804
Query 838 GCCACGAGGGAGCTGAGGGTAGCGAACGCGGAGAGGAAGAACCAAGAGGAGAAAGCCAGA 897
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 805 GCCACGAGGGAGCTAAGGGTAGCGAACGCGGAGAGGAAGAACCAAGAGGAGAAAGCCAGA 864
Query 898 GCAAGCTTGAAGCGCAAGCAAAAGAAGGTTTCATTGGGGAAGGCCGCATCTACAAGGTAT 957
||||||||||||||||||||||||||||||||| ||| |||||| |||||||||| ||||
Sbjct 865 GCAAGCTTGAAGCGCAAGCAAAAGAAGGTTTCAATGGCGAAGGCTGCATCTACAAAGTAT 924
Query 958 TCTAACGATCCAAAATATAGGTTCCTCCACGAACGTGTCTCTGATCTATTCGCAAATCAA 1017
|||||||||||||| |||||||| |||||||||||||||||||| |||||||||||||||
Sbjct 925 TCTAACGATCCAAACTATAGGTTTCTCCACGAACGTGTCTCTGAACTATTCGCAAATCAA 984
Query 1018 CTAAGGAGAGACCTTGAGTTTTTGACATCCGGCCAACCAAATAAAATCTCTCTAGCGGCT 1077
|||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 985 CTAAAGAGAGACCTTGAGTTTTTGACATCCGGCCAACCAAACAAAATCTCTCTAGCGGCT 1044
Query 1078 AAATGGTGTCCATCCCTTGATTCTTCGTTCGACAAAGCAACTCTGCTCTGCGAGAGCATT 1137
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 1045 AAATGGTGTCCATCCCTTGATTCTTCGTTCGACAAAGCAACTCTTATCTGCGAGAGCATA 1104
Query 1138 GCTAGGAAGATCTTTCCCCAAGAATCATTCCCGGAATACGAAGGCGTGGAAGATGCTCAC 1197
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1105 GCTAGGAAGATCTTTCCCCAAGAATCATTCCCGGAATACGAAGGCGTGGAAGATGCTCAC 1164
Query 1198 TATGCGTACAGAGTTCGTGATCGGCTAAGGAAACAAGTTCTTGTTCCCCTCCGGAAGACT 1257
|||||||||||||||||||| ||||||||||||||||| |||||||| ||||||||||||
Sbjct 1165 TATGCGTACAGAGTTCGTGACCGGCTAAGGAAACAAGTCCTTGTTCCTCTCCGGAAGACT 1224
Query 1258 CTGCAACTCCCTGAAGTATACATGGGAGCTAGAGCTTGGCGATCTCTCCCTTACAACCGT 1317
|||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||
Sbjct 1225 CTGCAACTCCCTGAAGTATACATGGGAGCTAGAGCTTGGCAATCTCTCCCTTATAACCGT 1284
Query 1318 GTTGCATCAGTGGCGATGAAGTCGTACAAAGAAATTTTCTTGTACCGTGACGCAGAGAGG 1377
||||||||||||||||||||||| ||||| || |||||||||| ||||||| | |||||
Sbjct 1285 GTTGCATCAGTGGCGATGAAGTCATACAAGGAGGTTTTCTTGTATCGTGACGAAAAGAGG 1344
Query 1378 TTTCAGCAATATCTTAAAGATGCGAGGATGGGGAAAACGAAGATAGCCGCGGGTGCTGTG 1437
||||||||||||||||| ||||| | || ||||||||||||||||||||| |||||||||
Sbjct 1345 TTTCAGCAATATCTTAACGATGCCAAGACGGGGAAAACGAAGATAGCCGCCGGTGCTGTG 1404
Query 1438 TTACCTCACGAGATAATCAGAGAATTAGACGGCGGAGACGGTGGACAA-GTCGCTGAGCT 1496
||||||||||||||||||||||| ||| |||||||||||||||| ||| |||||||||||
Sbjct 1405 TTACCTCACGAGATAATCAGAGAGTTAAACGGCGGAGACGGTGG-CAAAGTCGCTGAGCT 1463
Query 1497 GCAATGGAAACGAATGGTTGATGATCTTAAAAAGAAAGGTTCTTTGACCAACTGCATGGC 1556
||||||||||||||||||||| || |||||| ||||||||||||||||||||||||||||
Sbjct 1464 GCAATGGAAACGAATGGTTGACGACCTTAAAGAGAAAGGTTCTTTGACCAACTGCATGGC 1523
Query 1557 TATCTGTGACGTTTCGGGGTCTATGGAA-GGTGAGCCAATGGAGGTTTCAGTCGCACTTG 1615
||| |||||||||||||| |||||| || |||||||||||||||||||||||||| ||||
Sbjct 1524 TATATGTGACGTTTCGGGATCTATG-AATGGTGAGCCAATGGAGGTTTCAGTCGCCCTTG 1582
Query 1616 GTTTGCTAGTCTCTGAGTTATCAGAAGAGCCATGGAAAGGAAAGCTTATAACATTCAG-C 1674
| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
Sbjct 1583 GATTGCTAGTCTCTGAGCTATCAGAAGAGCCATGGAAAGGAAAGCTTATAACATTCAGAC 1642
Query 1675 AAAAACCCTGAATTGCATTTGGTGAAAGGAGACGATTTGAGATCAAAAACA-AGTTTCGT 1733
||| || |||| |||||||||||||||||||||||||||||||||||||| ||||| ||
Sbjct 1643 AAAGTCC-TGAACTGCATTTGGTGAAAGGAGACGATTTGAGATCAAAAACAGAGTTT-GT 1700
Query 1734 GGAGAATATGGAATGGGATATGAACACTGATTTTCAGAAAGTGTTTGATTTGATTCTTAA 1793
||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1701 GGAGAGCATGCAATGGGATATGAACACTGATTTTCAGAAAGTGTTTGATTTGATTCTTAA 1760
Query 1794 AGTGGCCGTAGAAGGGAAGCTGAAGCCAG-AAGAGATGATCAAGAGGGTGTTTGTGTTCA 1852
||||||||| ||| | ||||| ||||| | |||| |||||||||||||||||||||||||
Sbjct 1761 AGTGGCCGTGGAAAGCAAGCTTAAGCC-GCAAGACATGATCAAGAGGGTGTTTGTGTTCA 1819
Query 1853 GTGACATGGAGTTTGATCAAGCGTCGACT 1881
||||||||||||||||| |||||||||||
Sbjct 1820 GTGACATGGAGTTTGATGAAGCGTCGACT 1848
Score = 230 bits (124), Expect = 6e-59
Identities = 171/192 (89%), Gaps = 10/192 (5%)
Strand=Plus/Plus
Query 1930 GATTATGAGGTGATTGTGAGCAAGTACAAAGAGAAAGGGTACGGAGAAGCTGTGCCGCAG 1989
||||| ||||||||||||| ||||| | |||||||||||||||||| ||||||||| ||
Sbjct 1963 GATTACAAGGTGATTGTGAGAAAGTATAGAGAGAAAGGGTACGGAGAGGCTGTGCCGGAG 2022
Query 1990 ATAGTGTTTTGGAACCTGAGGGATTCGAGGTCAACGCCTGTGCTTGGAAACAAGAAAGGA 2049
|| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2023 ATTGTGTTTTGGAATCTGAGGGATTCGAGGTCAACGCCTGTGCTTGGAAACAAGAAAGGA 2082
Query 2050 GTGGCTTTGGTAAGTGGGTTTTCGAAGAATTTGATGAAAATGTTCTTGGATCACGATGGA 2109
||||||||||||||||||||||| || || | | ||||||||||| ||||||||
Sbjct 2083 GTGGCTTTGGTAAGTGGGTTTTCCAA-AA----A--A---TGTTCTTGGATTACGATGGA 2132
Query 2110 GAGATTGATCCC 2121
||||||||||||
Sbjct 2133 GAGATTGATCCC 2144
> AT5G13210.1 | Symbols: | Uncharacterised conserved protein UCP015417,
vWA | chr5:4214504-4216686 FORWARD LENGTH=2183
Length=2183
Score = 1308 bits (708), Expect = 0.0
Identities = 1148/1355 (85%), Gaps = 51/1355 (4%)
Strand=Plus/Plus
Query 841 ACGAGGGAGCTGAGGGTAGCGAACGCGGAGAGGAAGAACCAAGAGGAGAAAGCCAGAGCA 900
||||||| | |||| ||||| ||||| ||||||||||| |||| |||||||||||||||
Sbjct 715 ACGAGGGCGTTGAGAGTAGCCAACGCTGAGAGGAAGAATCAAGCCGAGAAAGCCAGAGCA 774
Query 901 AGCTTGAAGCGCAAGCAAAAGAAGGTTTC-ATTGGGGAAGGCCGCATCTACAAGGTATTC 959
|||||| | || ||| ||||||||||||| | ||||||||| ||| | |||||| |||||
Sbjct 775 AGCTTGGATCGGAAGAAAAAGAAGGTTTCGA-TGGGGAAGGACGCGTTTACAAGATATTC 833
Query 960 TAACGATCCAAAATATAGGT-TCCTCCACGAACGTGTCTCTGATCTATTCGCAAATCAAC 1018
| ||||||| | ||||| | | ||||||||||| ||||||||||||||||||||||| |
Sbjct 834 TTGCGATCCAGACTATAGATAT-CTCCACGAACGCGTCTCTGATCTATTCGCAAATCAGC 892
Query 1019 TAAGGAGAGACCTTGAGTTTTTGACATCCGG-CCAACCAAATAAAATCTCTCTAGCGGCT 1077
||| || ||| |||||||||||||||| ||| | ||||||| |||||||||| || |||
Sbjct 893 TAAAGAAAGATCTTGAGTTTTTGACAT-CGGACAAACCAAACGAAATCTCTCTTGCTGCT 951
Query 1078 AAATGGTGTCCATCCCTTGATTCTTCGTTCGACAAAGCAACTCTGCTCTGCGAGAGCATT 1137
|||||||||||||| ||||| |||||||| |||||||||||||| |||||||||||||||
Sbjct 952 AAATGGTGTCCATCGCTTGACTCTTCGTTTGACAAAGCAACTCTTCTCTGCGAGAGCATT 1011
Query 1138 GCTAGGAAGATCTTTCCCCAAGAATCATTCCCGGAATACGAAGGCGTGGAAGATGCTCAC 1197
||||||||||||||| | | |||||||||||| |||||||||||||| | ||| ||||||
Sbjct 1012 GCTAGGAAGATCTTTACTCGAGAATCATTCCCTGAATACGAAGGCGTTGTAGAAGCTCAC 1071
Query 1198 TATGCGTACAGAGTTCGTGATCGGCTAAGGAAACAAGTTCTTGTTCCCCTCCGGAAGACT 1257
||||| ||||||||||||||||||||||||||| | ||||||||||| || || || |||
Sbjct 1072 TATGCATACAGAGTTCGTGATCGGCTAAGGAAAGATGTTCTTGTTCCTCTGCGTAAAACT 1131
Query 1258 CTGCAACTCCCTGAAGTATACATGGGAGCTAG-AGCTTGGCGAT-CTCTCCCTTACAACC 1315
|||||||| ||||||||||| |||||||| || | | ||| ||| ||| || |||||||
Sbjct 1132 CTGCAACTGCCTGAAGTATATATGGGAGCGAGAAAC-TGG-GATATTCTTCCGTACAACC 1189
Query 1316 GTGTTGCATCAGTGGCGATGAAGTCGTACAAAGAAATTTTCTTGTACCGTGACGCAGAGA 1375
|||| |||||||||||||||||||||||||| || || |||||| | | ||||||||||
Sbjct 1190 GTGTAGCATCAGTGGCGATGAAGTCGTACAAGGAGATATTCTTGAAGCACGACGCAGAGA 1249
Query 1376 GGTTTCAGCAATATCTTAAAGATGC-GAGGATGGGGAAAACGAAGATAGCCGCGGGTGCT 1434
||||||||||||||||| | ||||| ||| ||||||||| ||| |||| || ||||||
Sbjct 1250 GGTTTCAGCAATATCTTGACGATGCAAAGG-CGGGGAAAACCAAGGTAGCTGCTGGTGCT 1308
Query 1435 GTGTTACCTCACGAGATAATCAGAGAATTAGACGGCGGAGACGGTGGACAAGTCGCTGAG 1494
||||| ||||| |||||||||||||| |||||||| ||||||||||||||||| || |||
Sbjct 1309 GTGTTGCCTCATGAGATAATCAGAGAGTTAGACGGTGGAGACGGTGGACAAGTAGCAGAG 1368
Query 1495 CTGCAATGGAA-ACGAATGGTTGATGATCTTAAAAAGAAAGGTTCTTTGACCAACTGCAT 1553
||||||||||| | ||| ||| |||||| | ||| ||||||||||||||| || || ||
Sbjct 1369 CTGCAATGGAAGA-GAACGGTAGATGATATGAAAGAGAAAGGTTCTTTGAGGAATTGTAT 1427
Query 1554 GGCTATCTGTGACGTTTCGGGGTCTATGGAA-GGTGAGCCAATGGAGGTTTCAGTCGCAC 1612
||| ||||||||||||| |||||||| ||| ||||| ||||||||||||| || ||
Sbjct 1428 AGCTGTCTGTGACGTTTCAGGGTCTAT-GAATGGTGAACCAATGGAGGTTTGTGTGGC-T 1485
Query 1613 TT-GGTTTGCTAGTCTCTGAGTTATCAGAAGAGCCATGGAAAGGAAAGCTTATAACATTC 1671
|| ||| |||||||||||||| |||| ||||||||||||||||||||||| ||||| |||
Sbjct 1486 TTGGGTCTGCTAGTCTCTGAGCTATCTGAAGAGCCATGGAAAGGAAAGCTAATAACTTTC 1545
Query 1672 AGCAAAAACCCTGAATTGCATTTGGTGAAAGGAGACGATTTGAGA-TCAAAAACA-AGTT 1729
||| |||| || || |||||||||||||||||||||||| || | ||||||||| ||||
Sbjct 1546 AGCCAAAATCCGGAGTTGCATTTGGTGAAAGGAGACGATCTG-TACTCAAAAACAGAGTT 1604
Query 1730 TCGTGGAGAATATGGAATGGGATATGAACACTGATTTTCAGAAAGTGTTTGATTTGATTC 1789
| || | || ||| |||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1605 T-GTTAAAAAAATGCAATGGGGTATGAACACTGATTTTCAGAAAGTGTTTGATTTGATTC 1663
Query 1790 TTAAAGTGGCCGTAGAAGGGAAGCTGAAGCCAGAAGAGATGATCAAGAGGGTGTTTGTGT 1849
|| |||||||||| ||| |||||||||||| ||||||||||||||||||||||||||||
Sbjct 1664 TTGGAGTGGCCGTACAAGAGAAGCTGAAGCCGGAAGAGATGATCAAGAGGGTGTTTGTGT 1723
Query 1850 TCAGTGACATGGAGTTTGATCAAGCG---TCGAC-TC-CGT-AT--AAT----GG--ATG 1895
||||||| |||||||||||||||||| ||| | || | | || || || |||
Sbjct 1724 TCAGTGATATGGAGTTTGATCAAGCGGCGTCGTCGTCACATTATTCAAGACCAGGCTATG 1783
Query 1896 GGG----AAGACCGCCTCCGAGTAAT----G----G-ATGGGATACAGATTATGAGGTGA 1942
||| | |||||| |||||| | | |||||| || |||||||| ||||
Sbjct 1784 CATTTTTAAGGCAGCCTCCAAGTAATCCAAGTAATGGATGGGAAACGGATTATGAAGTGA 1843
Query 1943 TTGTGAGCAAGTACAAAGAGAAAGGGTACGGAGAAGCTGTGCCGCAGATAGTGTTTTGGA 2002
||||||| ||||| ||| |||| ||||| ||||| | ||||||| |||||||||||||||
Sbjct 1844 TTGTGAGGAAGTATAAACAGAATGGGTATGGAGACGTTGTGCCGGAGATAGTGTTTTGGA 1903
Query 2003 ACCTGAGGGATTCGAG-GTCAACGCCTGTGCTTGGAAACAAGAAAGGAGTGGCTTTGGTA 2061
|| ||||||||||||| | ||||||| |||| ||||||||||||||||||||||||||
Sbjct 1904 ACTTGAGGGATTCGAGAG-CAACGCCGGTGCCGGGAAACAAGAAAGGAGTGGCTTTGGTG 1962
Query 2062 AGTGGGTTTTCGAAGAATTTGATGAAAATGTTCTTGGATCACGATGGAGAGATTGATCCC 2121
||||| |||||||||||||||||||||||||| ||||| || |||||||||||||||||
Sbjct 1963 AGTGGCTTTTCGAAGAATTTGATGAAAATGTTTTTGGAACATGATGGAGAGATTGATCCT 2022
Query 2122 ATTACGATCATGAAGGCTGCTATATCTAGAGATGA 2156
| | ||| ||| || ||||||| |||| ||||||
Sbjct 2023 GTGATGATGATGGAGACTGCTATTTCTAAAGATGA 2057
Score = 435 bits (235), Expect = 1e-120
Identities = 336/384 (88%), Gaps = 10/384 (3%)
Strand=Plus/Plus
Query 331 CCTGCGATGGGCTACACCGAGAATAGATCCGCCACGTACCTCTCCTCAGGCAACCCCTGT 390
||| ||||||||||||||||||||| ||||||||| |||||||||||||||||||||||
Sbjct 217 CCTCCGATGGGCTACACCGAGAATAAATCCGCCACTTACCTCTCCTCAGGCAACCCCTGC 276
Query 391 CTCGACTTCTTCTTTCACGTTGTTCCTTCCACGCCCAAGA-AATCTCTGGAGCAGCGGCT 449
|||||||||||||| ||||||||||| |||||| || | | ||||| |||||| || |
Sbjct 277 CTCGACTTCTTCTTCCACGTTGTTCCAAGCACGCCTAA-ACACTCTCTCGAGCAGTGGTT 335
Query 450 A-AAGGAGGCTTGGGACCATGATTCTTTAACCACTCTCAAGCTTATCTGTAACCTTCGAG 508
| |||| ||||||||||| || | || ||||| ||||||||||||||||| ||||| |
Sbjct 336 ACAAGG-TGCTTGGGACCACGACGCCTTGACCACACTCAAGCTTATCTGTAATCTTCGTG 394
Query 509 GAGTCCGTGGCACTGGAAAATCTGACAAGGAAGGGTTTTACACGGCGGCGTTGTGGCTCC 568
||||||||||||| |||||||| |||||||||||||||||||||||||| || |||||||
Sbjct 395 GAGTCCGTGGCACCGGAAAATCCGACAAGGAAGGGTTTTACACGGCGGCTTTATGGCTCC 454
Query 569 ATAGTCGCCATCCGAAAACCCTAGCTTGTAACCTCGAGTC-CATCTC-CAAGTTTGGCTA 626
|| |||| ||||| |||||||||||||||||||||||||| | | || ||| ||||| ||
Sbjct 455 ATGGTCGTCATCCCAAAACCCTAGCTTGTAACCTCGAGTCTC-TTTCTCAA-TTTGGATA 512
Query 627 TTTTAAAGATTTTCAAGAGATTCTTTACCGGATTCTACAAGGATCTGAAATCCGCA-GTA 685
||||||||||||| |||| |||||||||||||||||||||||||||||||||| | | |
Sbjct 513 CTTTAAAGATTTTCCAGAGCTTCTTTACCGGATTCTACAAGGATCTGAAATCCGGAAG-A 571
Query 686 TCCAGAAATCGGAATGGTACAAGA 709
|||||||||| ||| ||| |||||
Sbjct 572 TCCAGAAATCAGAAAGGTTCAAGA 595
> AT5G43390.1 | Symbols: | Uncharacterised conserved protein UCP015417,
vWA | chr5:17422799-17424964 REVERSE LENGTH=2166
Length=2166
Score = 100 bits (54), Expect = 5e-20
Identities = 187/246 (76%), Gaps = 30/246 (12%)
Strand=Plus/Plus
Query 1639 GAAGAGCCATGGAAA-GGAAAGCTTATAACATTCAGCAAAAACCCTG-A-ATTGCAT-TT 1694
|||||||| |||||| |||||| |||| || || ||| ||||||| | | || ||| ||
Sbjct 1444 GAAGAGCCGTGGAAAGGGAAAG-TTATCACTTTTAGCGAAAACCC-GCAGCTT-CATGTT 1500
Query 1695 GGTGAAAGGAG-ACGA-TTTGAGATCA-AAAAC-AAGTTTCG-TGGAGAATATGGA-ATG 1748
|| | || | ||| | ||||| | || || |||||| | | ||||| ||||| |
Sbjct 1501 -GT-CACGG-GTTCGAGTCTGAGA-GAGAAGACTAAGTTT-GTTAGAGAA-ATGGATTTT 1554
Query 1749 GGATATGAACACTGATTTTCAGAAAGTGTTTGATTTGATTCTTA-AAGTGGCCGT--AGA 1805
||| || ||||| ||||| ||||| ||||||||| ||||| || | || || || |||
Sbjct 1555 GGA-ATCAACACAGATTTCCAGAAGGTGTTTGATCGGATTC-TAGAGGTTGCTGTCGAGA 1612
Query 1806 AGGGAAGCTGAAGCC-A-GAAGAGATGATCAAGAGGGTGTTTGTGTTCAGTGACATGGAG 1863
| || || || || | ||| ||||||||||| || |||||||||||||||||||||||
Sbjct 1613 A--TAA-CTTAA-CCGATGAACAGATGATCAAGCGGTTGTTTGTGTTCAGTGACATGGAG 1668
Query 1864 TTTGAT 1869
||||||
Sbjct 1669 TTTGAT 1674
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 108784581015
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5