BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg480065
Length=1559
Score E
Sequences producing significant alignments: (Bits) Value
AT2G04100.1 | Symbols: | MATE efflux family protein | chr2:137... 2436 0.0
AT2G04090.1 | Symbols: | MATE efflux family protein | chr2:136... 1993 0.0
AT2G04050.1 | Symbols: | MATE efflux family protein | chr2:133... 763 0.0
AT2G04040.1 | Symbols: ATDTX1, TX1 | MATE efflux family protein... 752 0.0
> AT2G04100.1 | Symbols: | MATE efflux family protein | chr2:1376890-1379130
REVERSE LENGTH=1661
Length=1661
Score = 2436 bits (1319), Expect = 0.0
Identities = 1481/1561 (95%), Gaps = 4/1561 (0%)
Strand=Plus/Plus
Query 1 GAAGTCGTGCATTCTTATCTCACACGTTCCAAGGTAAAGAAAGGATCGTTGACAAGAACT 60
||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 1 GAAGTCGTGCATTCTCATCTCACACGTTCCAAGGTCAAGAAAGGATCGTTGACAAGAACT 60
Query 61 AAAGATCTCCGAGAAGATAATGGAAGATCCACTTTTATTGGAAGACGATCAGATAATCAC 120
|||||||||| |||||||||||||||||||||||||||||| |||| |||||||||||||
Sbjct 61 AAAGATCTCCAAGAAGATAATGGAAGATCCACTTTTATTGGGAGACAATCAGATAATCAC 120
Query 121 CGGAAGTCTTAAGCCGACGCCGACATGGAGAATGAATTTCACGGCGGAGCTAAAGAACGT 180
|||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| |
Sbjct 121 CGGAAGTCTTAAGCCGACGCCGACATGGAGGATGAATTTCACGGCGGAGCTCAAGAACCT 180
Query 181 CAGCCGCATGGCGTTGCCTATGGCCACCGTGACCGTTGCTCAATATCTATTGCCCGTTAT 240
||||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||||
Sbjct 181 CAGCCGCATGGCGCTGCCTATGGCCACCGTGACTGTTGCTCAATATCTATTACCCGTTAT 240
Query 241 CTCAGTCATGGTCGCCGGCCACCGCAGCGAACTCCAGCTCTCCGGCGTCGCTCTTGCCAC 300
|||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||
Sbjct 241 CTCAGTCATGGTCGCCGGCCACCGCAGCGAACTCCAGCTCTCAGGCGTTGCTCTTGCCAC 300
Query 301 TTCTTTTGCAAACGTCTCTGGCTTCAGCCTCATGTTTGGTTTAGTGGGTGCACTTGAAAC 360
||||||| ||||||| || |||||||| ||||||||||||||| |||||||||||||||
Sbjct 301 TTCTTTTACAAACGTATCCGGCTTCAGTGTCATGTTTGGTTTAGCGGGTGCACTTGAAAC 360
Query 361 TCTATGTGGCCAAGCTTATGGAGCAAAACAATACGCGAAAATCGGAACTTACACTTACTC 420
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 361 TCTATGTGGCCAAGCTTATGGAGCAAAACAATACGCGAAAATCGGAACTTACACTTTCTC 420
Query 421 TGCAATAGTCTCAAACATACCTATAGTTGTTCTCATATCGATTCTCTGGTTTTATATGGA 480
|||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||
Sbjct 421 TGCAATAGTCTCAAACGTACCTATAGTTGTTCTCATATCGATTCTCTGGTTTTACATGGA 480
Query 481 CAAACTC-TTGATTTCAATCGGACAAGATCCTGACATCTCCAAGGTAGCTGGTTCCTACG 539
||||||| ||| ||||| | ||||||||||||||||||||||||||||||||||| ||||
Sbjct 481 CAAACTCTTTG-TTTCACTTGGACAAGATCCTGACATCTCCAAGGTAGCTGGTTCTTACG 539
Query 540 CGGTTTGTCTTATACCTGCATTGTTAGCTCAAGCGGTGCAACAACCTTTGAATCGGTTTC 599
|||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||
Sbjct 540 CGGTTTGTCTTATACCGGCATTGTTAGCTCAAGCGGTGCAACAACCTTTGACTCGGTTTC 599
Query 600 TCCAGACTCAGGGCTTGGTTCTTCCTCTTCTCTACTGTGCCATCACCACACTTTTGTTCC 659
||||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||||
Sbjct 600 TCCAGACTCAGGGTTTGGTTCTTCCTCTTCTCTACTGTGCCATAACCACCCTTTTGTTCC 659
Query 660 ATATATTC-GTTTGTTTGGTTCTGGTTTACGCGTTTGGTCTTGGAAGCAATGGAGCCGCA 718
||||| | ||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 660 ATATA-CCAGTTTGTTTGATTCTGGTTTACGCGTTTGGTCTTGGAAGCAATGGAGCCGCC 718
Query 719 TTGGCTATTGGTTTGTCTTACTGGTTTAATGTCTTGATTCTTGCTTTATATGTGAGATTT 778
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 719 TTGGCTATTGGTTTGTCTTACTGGTTTAACGTCTTGATTCTTGCTTTATATGTGAGATTT 778
Query 779 TCAAGCGCTTGCGAAAAGACTCGGGGCTTTGTATCCGATGATTTCGTGTTGAGTGTCAAG 838
||||| ||||||| |||||||| |||||||| || ||||||||||||||||||||||||
Sbjct 779 TCAAGTTCTTGCGAGAAGACTCGCGGCTTTGTGTCTGATGATTTCGTGTTGAGTGTCAAG 838
Query 839 CAGTTTTTTCAGTATGGGATACCATCAGCAGCAATGACTACCATTGAATGGTCGTTGTTT 898
||||||||||||||||| ||||| || ||||||||||| ||||| || ||||| ||||||
Sbjct 839 CAGTTTTTTCAGTATGGAATACCTTCGGCAGCAATGACAACCATAGAGTGGTCATTGTTT 898
Query 899 GAGCTCCTTATATTATCCTCAGGACTCCTCCCAAACCCGAAACTCGAGACCTCTGTTCTT 958
||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 899 GAGTTCCTTATATTATCTTCAGGACTCCTCCCAAACCCGAAACTCGAGACCTCTGTTCTT 958
Query 959 TCCATTTGTCTTACAACATCATCTCTCCACTATGTCATTCCAATGGGTATCGGGGCGGCT 1018
||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||
Sbjct 959 TCCATTTGTCTTACAACCTCATCTCTCCACTATGTCATTCCAATGGGTATTGGGGCGGCT 1018
Query 1019 GGAAGCGTACGGGTTTCAAACGAATTGGGAGCGGGGAATCCGGAGGTTGCTAGGCTGGCA 1078
||||| |||||||||||||||||||||||||||| ||||| |||||||| |||||||||
Sbjct 1019 GGAAGTATACGGGTTTCAAACGAATTGGGAGCGGGTAATCCCGAGGTTGCGAGGCTGGCA 1078
Query 1079 GTGCTTACCGGTATTTTCCTTTGGTTCCTAGAGGCTACCATTTGTAGCACACTTCTCTTC 1138
||| || ||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1079 GTGTTTGCCGGTATATTCCTTTGGTTCCTAGAGGCTACCATTTGTAGCACACTTCTCTTC 1138
Query 1139 ATTTGCAGAAATATCTTCGGGTATGCCTTCAGCAACAGCAAAGAAGTTGTGGACTATGTC 1198
||||| ||| |||||||||| || ||||| ||||| ||||||||||||||||||||||||
Sbjct 1139 ATTTGTAGAGATATCTTCGGCTACGCCTTTAGCAATAGCAAAGAAGTTGTGGACTATGTC 1198
Query 1199 ACAGAGCTATCTCCTTTGCTTTGTATCTCATTTATGGTTGATGGATTTTCGGCAGTGCTT 1258
||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||
Sbjct 1199 ACAGAGCTATCTCCTTTGCTTTGTATCTCATTTTTGGTTGATGGATTTTCTGCAGTGCTT 1258
Query 1259 GGTGGGGTTGCTAGGGGAAGTGGATGGCAACATATTGGAGCTTGGGCAAATGTGGTGGCT 1318
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 GGTGGGGTTGCTAGGGGAAGTGGATGGCAACATATTGGAGCTTGGGCAAATGTGGTGGCT 1318
Query 1319 TACTATCTCCTAGGAGCTCCGGTTGGACTTTTCTTAGGATTTTGGTGTCACATGAACGGT 1378
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1319 TACTATCTCCTAGGAGCTCCGGTTGGACTTTTCTTAGGATTTTGGTGTCACATGAATGGT 1378
Query 1379 AAAGGGCTATGGATCGGTGTAGTGGTTGGGTCTACGGCGCAAGGAATCATACTAGCTATA 1438
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1379 AAAGGGCTATGGATCGGTGTGGTGGTTGGGTCTACGGCGCAAGGAATCATACTAGCTATA 1438
Query 1439 GTCACTGCTTGCATGAGTTGGAATGAGCAGGCTGCCAAGGCAAGAAAGAGAATAGTTGTA 1498
||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||
Sbjct 1439 GTCACTGCTTGCATGAGTTGGAACGAGCAGGCTGCCAAGGCAAGACAGAGAATAGTTGTA 1498
Query 1499 CGAACTTCTTCATTTGGCAATGGACTAGCTTAAAAGGTTCTTTATTTCCATTTTTGAGAC 1558
||||||||||||||||||||||||| |||| || ||||||||||| |||||||||||||
Sbjct 1499 AGAACTTCTTCATTTGGCAATGGACTTGCTTGAAGGGTTCTTTATTCCCATTTTTGAGAC 1558
Query 1559 A 1559
|
Sbjct 1559 A 1559
> AT2G04090.1 | Symbols: | MATE efflux family protein | chr2:1362653-1364690
REVERSE LENGTH=1434
Length=1434
Score = 1993 bits (1079), Expect = 0.0
Identities = 1315/1430 (92%), Gaps = 12/1430 (1%)
Strand=Plus/Plus
Query 80 ATGGAAGATCCACTTTTATTGGAAGACGATCAGATAATCACCGGAAGTCTTAAGCCGACG 139
|||||||||||||||||||||| ||| |||||| ||||||| ||| || ||| | |||
Sbjct 1 ATGGAAGATCCACTTTTATTGGGAGATGATCAGTTAATCACTAGAAACCTCAAGTCAACG 60
Query 140 CCGACATGGAGAATGAATTTCACGGCGGAGCTAAAGAACGTCAGCCGC-ATGGCGTTGCC 198
||||||||| | |||||||| ||||||||||| ||||||||||| | | |||||| |||
Sbjct 61 CCGACATGGTGGATGAATTTTACGGCGGAGCTGAAGAACGTCAG-CTCTATGGCGGCGCC 119
Query 199 TATGGCCACCGTGACCGTTG-CTCAATATCTATTGCCCGTTATCTCAGTCATGGTCGCCG 257
||||||||||||||| | || ||||||||||||||||||| ||||| |||||||||||||
Sbjct 120 TATGGCCACCGTGACAG-TGTCTCAATATCTATTGCCCGTGATCTCGGTCATGGTCGCCG 178
Query 258 GCCACCGCAGCGAACTCCAGCTCTCCGGCGTCGCTCTTGCCACTTCTTTTGCAAACGTCT 317
||||| || | ||||||||||| || || ||| ||||||||||| |||| ||||||||||
Sbjct 179 GCCACTGCGGTGAACTCCAGCTGTCTGGTGTCACTCTTGCCACTGCTTTCGCAAACGTCT 238
Query 318 CTGGCTTCAGCCTCATGTTTGGTTTAGTGGGTGCACTTGAAACTCTATGTGGCCAAGCTT 377
| |||||| || |||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 239 CCGGCTTCGGCATCATGTATGGTTTAGTGGGTGCACTTGAAACTCTATGTGGCCAAGCTT 298
Query 378 ATGGAGCAAAACAATACGCGAAAATCGGAACTTACACTTACTCTGCAATAGTCTCAAACA 437
||||||||||||||||| | ||||||||||||||||||| |||||||||||||||||||
Sbjct 299 ATGGAGCAAAACAATACACTAAAATCGGAACTTACACTTTCTCTGCAATAGTCTCAAACG 358
Query 438 TACCTATAGTTGTTCTCATATCGATTCTCTGGTTTTATATGGACAAACTC-TTGATTTCA 496
||||||||||||||||||||||||||||||||||||| |||||||||||| ||| |||||
Sbjct 359 TACCTATAGTTGTTCTCATATCGATTCTCTGGTTTTACATGGACAAACTCTTTG-TTTCA 417
Query 497 ATCGGACAAGATCCTGACATCTCCAAGGTAGCTGGTTCCTACGCGGTTTGTCTTATACCT 556
| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 418 CTTGGACAAGATCCTGACATCTCCAAGGTAGCTGGTTCTTACGCGGTTTGTCTTATACCG 477
Query 557 GCATTGTTAGCTCAAGCGGTGCAACAACCTTTGAATCGGTTTCTCCAGACTCAGGGCTTG 616
||||||||||||||||| |||||||||||||||| ||||||||||||||||||||| |||
Sbjct 478 GCATTGTTAGCTCAAGCAGTGCAACAACCTTTGACTCGGTTTCTCCAGACTCAGGGTTTG 537
Query 617 GTTCTTCCTCTTCTCTACTGTGCCATCACCACACTTTTGTTCCATATATTC-GTTTGTTT 675
|||||||||||||||||||||||||| ||||| ||||| ||||||||| | ||||||||
Sbjct 538 GTTCTTCCTCTTCTCTACTGTGCCATAACCACCCTTTTATTCCATATA-CCAGTTTGTTT 596
Query 676 GGTTCTGGTTTACGCGTTTGGTCTTGGAAGCAATGGAGCCGCATTGGCTATTGGTTTGTC 735
| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 597 GATTCTGGTTTACGCGTTTGGTCTTGGAAGCAATGGAGCCGCCTTGGCTATTGGTTTGTC 656
Query 736 TTACTGGTTTAATGTCTTGATTCTTGCTTTATATGTGAGATTTTCAAGCGCTTGCGAAAA 795
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 657 TTACTGGTTTAATGTCTTGATTCTTGCTTTATATGTGAGATTTTCAAGCGCTTGCGAGAA 716
Query 796 GACTCGGGGCTTTGTATCCGATGATTTCGTGTTGAGTGTCAAGCAGTTTTTTCAGTATGG 855
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 717 GACTCGCGGCTTTGTATCCGATGATTTCGTGTTGAGTGTCAAGCAGTTTTTTCAGTATGG 776
Query 856 GATACCATCAGCAGCAATGACTACCATTGAATGGTCGTTGTTTGAGCTCCTTATATTATC 915
||||||||||||||||||||| ||||| |||||||||||||||||||||||||| |||||
Sbjct 777 GATACCATCAGCAGCAATGACAACCATAGAATGGTCGTTGTTTGAGCTCCTTATCTTATC 836
Query 916 CTCAGGACTCCTCCCAAACCCGAAACTCGAGACCTCTGTTCTTTCCATTTGTCTTACAAC 975
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 837 TTCAGGACTCCTCCCAAACCCGAAACTCGAGACCTCTGTTCTTTCCATTTGTCTTACAAC 896
Query 976 ATCATCTCTCCACTATGTCATTCCAATGGGTATCGGGGCGGCTGGAAGCGTACGGGTTTC 1035
|||||||||||||| |||||||||||||||||||||||| ||||||||| |||| ||||
Sbjct 897 ATCATCTCTCCACTGTGTCATTCCAATGGGTATCGGGGCTGCTGGAAGCACACGGATTTC 956
Query 1036 AAACGAATTGGGAGCGGGGAATCCGGAGGTTGCTAGGCTGGCAGTGCTTACCGGTATTTT 1095
|||||||||||||||||| ||||||||||||||||||||||||||| || ||||||||||
Sbjct 957 AAACGAATTGGGAGCGGGAAATCCGGAGGTTGCTAGGCTGGCAGTGTTTGCCGGTATTTT 1016
Query 1096 CCTTTGGTTCCTAGAGGCTACCATTTGTAGCACACTTCTCTTCATTTGCAGAAATATCTT 1155
||||||||||||||||||||||||||||||||||||||| |||| ||||| |||||| ||
Sbjct 1017 CCTTTGGTTCCTAGAGGCTACCATTTGTAGCACACTTCTGTTCACTTGCAAAAATATTTT 1076
Query 1156 CGGGTATGCCTTCAGCAACAGCAAAGAAGTTGTGGACTATGTCACAGAGCTATCTCCTTT 1215
|| || || |||||||| |||||||||||||||||||||||||| ||||||||| | |
Sbjct 1077 TGGCTACGCGTTCAGCAATAGCAAAGAAGTTGTGGACTATGTCACGGAGCTATCTTCGCT 1136
Query 1216 GCTTTGTATCTCATTTATGGTTGATGGATTTTCGGCAGTGCTTGGTGGGGTTGCTAGGGG 1275
||||||| | ||||||||||| ||||||||||| ||||||||| |||||||||||||||
Sbjct 1137 GCTTTGTCTTTCATTTATGGTCGATGGATTTTCTTCAGTGCTTGATGGGGTTGCTAGGGG 1196
Query 1276 AAGTGGATGGCAACATATTGGAGCTTGGGCAAATGTGGTGGCTTACTATCTCCTAGGAGC 1335
|||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1197 AAGTGGGTGGCAAAATATTGGAGCTTGGGCAAATGTGGTGGCTTACTATCTCCTAGGAGC 1256
Query 1336 TCCGGTTGGACTTTTCTTAGGATTTTGGTGTCACATGAACGGTAAAGGGCTATGGATCGG 1395
||| |||||| ||||||||||||||||| |||| |||||||| |||||||||||||| ||
Sbjct 1257 TCCTGTTGGATTTTTCTTAGGATTTTGGGGTCATATGAACGGCAAAGGGCTATGGATTGG 1316
Query 1396 TGT-AGTGGTTGGGTCTACGGCGCAAGGAATCATACTAGCTATAGTCACTGCTTGCATGA 1454
||| | | |||||||| || || ||||| ||||||||||||||||||||||||||| |||
Sbjct 1317 TGTGA-TCGTTGGGTCCACTGCTCAAGGGATCATACTAGCTATAGTCACTGCTTGCCTGA 1375
Query 1455 GTTGGAATGAGCAGGCTGCCAAGGCAAGA-AAGAGAATAGTTGTACGAAC 1503
||||| | ||||||||||||||||| ||| || |||||||||| | ||||
Sbjct 1376 GTTGGGAGGAGCAGGCTGCCAAGGCCAGAGAA-AGAATAGTTGGAAGAAC 1424
> AT2G04050.1 | Symbols: | MATE efflux family protein | chr2:1337386-1339270
REVERSE LENGTH=1431
Length=1431
Score = 763 bits (413), Expect = 0.0
Identities = 1057/1361 (78%), Gaps = 72/1361 (5%)
Strand=Plus/Plus
Query 167 GAGCTAAAGAACGTCAGCCGCATGG-CGTTGCCTATGGCCACCGTGACCGTTGCTCAATA 225
||||| ||||| || ||| || ||| || | ||||||||| |||||||| ||||||| ||
Sbjct 79 GAGCTGAAGAAAGTGAGCAGCTTGGCCGCT-CCTATGGCCGCCGTGACCATTGCTCAGTA 137
Query 226 TC-TATTGCCCGTTATCTCAGTCATGGTCGCCGGCCACCGCAGCGAACTCCAGCTCTCCG 284
| ||||||| || || |||||||||||||| |||||| | || |||||||||||||
Sbjct 138 -CTTATTGCCTGTCATTTCAGTCATGGTCGCTGGCCACAATGGTGAGCTCCAGCTCTCCG 196
Query 285 GCGTCGCTCTTGCCACTTCTTTTGCAAACGTCTCTGGCTTCAGCCTCATGTTTGGTTTAG 344
||||||||||||| || || || ||||||| || || ||||| | ||||||| ||||
Sbjct 197 GCGTCGCTCTTGCAACCTCCTTCACAAACGTTTCCGGGTTCAGTATTTTGTTTGGGTTAG 256
Query 345 TGGGTGCACTTGAAACTCTATGTGGCCAAGCTTATGGAGCAAAACAATACGCGAAAATCG 404
||||||||| |||||||| |||||||||||||||||||| |||||||||| |||||||
Sbjct 257 CGGGTGCACTAGAAACTCTTTGTGGCCAAGCTTATGGAGCCAAACAATACGAAAAAATCG 316
Query 405 GAACTTACACTTACTCTGCAA-TAGTCTCAAACATACCTATAGT-TGTTCTCATATCGA- 461
|||| ||||| |||||||||| | | ||| ||||| |||||| | ||| |||||||| |
Sbjct 317 GAACCTACACATACTCTGCAACT-GCCTCTAACATCCCTATA-TGTGTCCTCATATC-AG 373
Query 462 TTCTCTGGTTTTATATGGACAAA-CTCTTGATTTCAATCGGACAAGATCCTGACATCTCC 520
|||||||| |||| || || ||| ||||| || || |||| ||||| |||||||||| |
Sbjct 374 TTCTCTGGATTTACATCGA-AAAGCTCTTAATCTCTCTCGGTCAAGACCCTGACATCT-C 431
Query 521 AAG-GTAGCTGGTTCCTACGCGGTT-TGTCTTATACCTGCATTGTTAGCTCAAGCGGTGC 578
|| || ||||| ||||| || || || || ||||| || ||||| || || || ||
Sbjct 432 TAGAGTCGCTGGCTCCTATGC-CTTGTGGCTCATACCGGCTTTGTTCGCCCATGC-GTTT 489
Query 579 AACA-ACCTTTGAATCGGTTTCT-CCAGACTC-AGGGCTTGGTTCTTCCTCTTCTCTACT 635
|| || ||| ||||||||| | || | | |||| ||||||||||| || |||||||
Sbjct 490 TTCATCCCACTGACTCGGTTTCTGCTAG-CACAAGGG-TTGGTTCTTCCACTGCTCTACT 547
Query 636 GTGCCATCACCACACTTTTGTTCCATATATTC-GTTTGTTTGG-TTCTGGTTTACGCGTT 693
|| || | ||||| ||||||||||| || | ||||| | || || | |||||||||||
Sbjct 548 GTACCCTGACCACTCTTTTGTTCCACAT-CCCTGTTTGCTGGGCTT-TTGTTTACGCGTT 605
Query 694 TGGTCTTGGAAGCAATGGAGCCG-CATTGGCTATTGGTTTGTCTTACTGGTT-TAATGTC 751
|||||| |||||||||||||| | || |||||||| || |||||| |||||| | ||||
Sbjct 606 TGGTCTGGGAAGCAATGGAGCTGCCA-TGGCTATTAGTGTGTCTTTCTGGTTCT-ATGT- 662
Query 752 T-TGATTCT-TGC-TTTATATGTGAGATTTTCAAGCGCTTGCGAAAAGACTCGGGGCTTT 808
| ||||||| | | | | |||||||| | || ||| | ||||| |||||||| | |||
Sbjct 663 TGTGATTCTCT-CATGT-TATGTGAGGTACTCCAGCTCCTGCGACAAGACTCGCGTATTT 720
Query 809 GTATCCGA-TGATTTCGTGT-TGAGTGTCAAGCAGTTTTTTCAGTATGGGA-TACCATCA 865
|||||| | ||||||||||| | || |||||||||| || || | | ||| | ||||||
Sbjct 721 GTATCC-AGTGATTTCGTGTCT-TGTATCAAGCAGTTCTTCCACT-TCGGAGTCCCATCA 777
Query 866 GCAGCAAT-GACTACCATTGAATGGTCGTTGTTTGAGCTCCTTATATTATCCTCAGGACT 924
|| ||||| | | || | ||||||| | | |||||||| || ||| | | ||||| ||
Sbjct 778 GCGGCAATGGTTTGCC-TAGAATGGTGGCTATTTGAGCTACTCATACTCTGTTCAGGTCT 836
Query 925 CCTCCCAAACCCGAAACTCGAGACCTCTGTTCTTTCCATTTGTCTTACAACATCATCTCT 984
||||||||||||||||||||||||||||||||||| ||||||||||||||| || | |
Sbjct 837 TCTCCCAAACCCGAAACTCGAGACCTCTGTTCTTTCAATTTGTCTTACAACAGCAAGTTT 896
Query 985 CCACTATGTCATTCCAA-TGG-GTATCGGGGCGGCTG-GAAGCGTACGGGTTTCAAACGA 1041
|||||||| |||||| ||| || || |||||||| || || ||| || |||||| |
Sbjct 897 GCACTATGTGATTCCAGGTGGAGT--CGCGGCGGCTGTGA-GCACACGCGTGTCAAACAA 953
Query 1042 ATTGGGAGCGGGGAATCCGGAGGTTGCTAGGCTGGCAGTGCTTACC-GGTATTT-TCCTT 1099
||||||||| |||| ||| | ||||||||| | |||| || | || ||| || |
Sbjct 954 ATTGGGAGCTGGGATTCCTCAAGTTGCTAGGGTTTCAGTA-TTGGCAGGGCTTTGTC-TC 1011
Query 1100 TGG-TTCCTAGAGGCTACCATT-TGTAGCACACTTCTCTTCATTTGCAGAAATATCT-TC 1156
||| || ||||| | | | || | ||||||||||||||||| ||| |||| || | |
Sbjct 1012 TGGCTTG-TAGAGTC-AGCTTTCTTTAGCACACTTCTCTTCACATGCCGAAACAT-TATA 1068
Query 1157 GGGTATGCCTTCAGCAACAGCAAAGAAGTTGTGGACTATGTCAC-AGAGCTATCTCCTTT 1215
|| || || |||||||||||||||||||||||||||||||| | | | ||| |||||||
Sbjct 1069 GGCTACGCATTCAGCAACAGCAAAGAAGTTGTGGACTATGTGGCTA-ACCTAACTCCTTT 1127
Query 1216 GCTTTGTATCTCATTTATGGTTGATGGATTTT-CGGCAGTGCTTGG-TGGGGTTGCTAGG 1273
||| || |||| ||||| | || || ||| | ||||| || | ||||||||| |||
Sbjct 1128 GCTCTGCCTCTCCTTTATCCTCGACGG-TTTCACAGCAGTTCT-GAATGGGGTTGCAAGG 1185
Query 1274 GGAAGTGGATGGCAACATATTGGAGCTTGGG-CAAATGTGGTGGCTTACTATCTCCTAGG 1332
|||||||| |||||||| |||||||||| | ||| ||||| ||||| ||||| ||||
Sbjct 1186 GGAAGTGGTTGGCAACACATTGGAGCTTTGAACAAC-GTGGTAGCTTATTATCTTGTAGG 1244
Query 1333 AGCTCCGGTTGGACTTTTCTTAGGATTTTGGT-GTCACATGAACGGTAAAGGGCTATGGA 1391
|||||| |||||| | | ||||| ||| | || | ||||||| ||||| || |||
Sbjct 1245 AGCTCCTGTTGGAGTATACTTAGC-TTTCAATCGTGAGTTGAACGGAAAAGGACTTTGGT 1303
Query 1392 -TCGGTGTAGTGGTTGGGTCTACGGCGCAAGGAATCATACTAGCTATAGTCACTGCTTGC 1450
| ||||| ||||| || || | | ||||| || ||| | ||| | ||||| |||| |
Sbjct 1304 GT-GGTGTTGTGGTCGGATCCGCTGTGCAAGCCATAATATTGGCTTTTGTCACAGCTTCC 1362
Query 1451 ATGAGTTGGAATGAGCAGGCTGCCAAGGCAAGAAAGAGAAT 1491
|| | |||||| || ||||||| ||||| || ||||||||
Sbjct 1363 ATAAATTGGAAGGAACAGGCTGAGAAGGCTAGGAAGAGAAT 1403
> AT2G04040.1 | Symbols: ATDTX1, TX1 | MATE efflux family protein
| chr2:1334512-1336489 REVERSE LENGTH=1542
Length=1542
Score = 752 bits (407), Expect = 0.0
Identities = 1057/1363 (78%), Gaps = 76/1363 (6%)
Strand=Plus/Plus
Query 167 GAGCTAAAGA-ACGTCAGCCGCATGG-CGTTGCCTATGGCCACCGTGACCGTTGCTCAAT 224
|||||||||| | || |||||| ||| || | ||||||||||| |||||| ||||||| |
Sbjct 88 GAGCTAAAGAGA-GTGAGCCGCTTGGCCGCT-CCTATGGCCACTGTGACCATTGCTCAGT 145
Query 225 ATC-TATTGCCCGTTATCTCAGTCATGGTCGCCGGCCACCGCAGCGAACTCCAGCTCTCC 283
| | ||||||| || ||||| ||||||||||| |||||| | |||| ||||||||||||
Sbjct 146 A-CTTATTGCCTGTCATCTCGGTCATGGTCGCTGGCCACAACGGCGAGCTCCAGCTCTCC 204
Query 284 GGCGTCGCTCTTGC-CACTTCTTTTGCAAACGTCTCTGGCTTCAGCCTCATGTTTGGTTT 342
|| ||||||||||| || || || |||||||| | || || ||| | |||| ||| ||
Sbjct 205 GGTGTCGCTCTTGCAAAC-TCCTTCACAAACGTCACCGGTTTTAGCATTATGTGTGGATT 263
Query 343 AGTGGGTGCACTTGAAACTCTATGTGGCCAAGCTTATGGAGCAAAACAATACGCGAAAAT 402
||||||||||||||||||||| |||||||||||||||||||| |||||||| | |||||
Sbjct 264 AGTGGGTGCACTTGAAACTCTTTGTGGCCAAGCTTATGGAGCCAAACAATATGAAAAAAT 323
Query 403 CGGAACTTACACTTACTCTGCAATAGTC-TCAAACATACCTATAGTTG-TT-CTCATATC 459
|||||||||| | |||||||| || | | || |||||||| | | ||| || ||||||||
Sbjct 324 CGGAACTTACGCATACTCTGCTATTG-CTTCCAACATACC-A-ATTTGTTTCCTCATATC 380
Query 460 GATTCTCTGGTTTTATATGGACAAA-CTCTTGATTTCAATCGGACAAGATCCTGACATCT 518
||||||||| |||| || || ||| |||||||||| |||||||||| ||||| || |
Sbjct 381 AATTCTCTGGCTTTACATCGA-AAAGATCTTGATTTCTCTCGGACAAGACCCTGAAAT-T 438
Query 519 CCAAG-GTAGCTGGTTCCTACGCGGTTTGTCTTATACCTGCATT-GTTAGCTCAAGCG-G 575
|||| | ||||| |||||||| |||| |||||||| || || || || ||||||
Sbjct 439 TCAAGAATCGCTGGCTCCTACGCCTTTTGGCTTATACCGGCTTTATTTGGC-CAAGCGAT 497
Query 576 TGCAACA-ACCTTTGAATCGGTTTCT-CCAGACTC-AGGGCTTGGTTCTTCCTCTTCTCT 632
|| || ||| || |||||||| | | || | |||| |||||| ||||||| ||||
Sbjct 498 TG--TCATACCACTGTCCCGGTTTCTGCTA-ACACAAGGG-TTGGTTATTCCTCTGCTCT 553
Query 633 ACTGTGCCATCACCACACTTTTGTTCCATATATTCGTTTGTTTGG--TTCTGGTTTACGC 690
| |||| | ||||| ||||||||||| | || ||||| |||| || |||||| |
Sbjct 554 TCACTGCCGTGACCACCCTTTTGTTCCACGTTTTGGTTTG-TTGGACTT-TGGTTTTCTT 611
Query 691 GTTTGGTCTTGGAAGCAATGGAGCC-G-CATTGGCTATTGGTTTGTCTTACTGGTTTAAT 748
||||||||| ||| | |||||| || | || |||||| || |||||| ||||||| |
Sbjct 612 GTTTGGTCTGGGATGTAATGGA-CCTGCCA-TGGCTACAAGTGTGTCTTTCTGGTTTTAC 669
Query 749 GTCT-TGATTCT-TGC-TTTATATGTGAGATTTTCAAGCGCTTGCGAAAAGACTCGGGGC 805
| || |||| || | | | | ||||||||||| || ||| ||||||| |||||||| ||
Sbjct 670 G-CTGTGATACTCT-CATGT-TATGTGAGATTCTCCAGCTCTTGCGAGAAGACTCGCGGA 726
Query 806 TTTGTAT-CCGATGATTTCGTGT-TGAGTGTCAAGCAGTTTTTTCAGTATGGGATACCAT 863
||||||| |||| ||||| |||| | | |||||||||| || || || || || ||||
Sbjct 727 TTTGTATCCCGA-GATTTTGTGTCT-TCTATCAAGCAGTTCTTCCAATACGGAATCCCAT 784
Query 864 CAGCAGCAATGA-CTACCATTGAATGGTCGTTGTTTGAGCTCCTTATATTATCCTCAGGA 922
|||| ||||||| | | | ||||||| | | |||||| | || ||| | | ||||||
Sbjct 785 CAGCTGCAATGATTTGTC-TAGAATGGTGGCTATTTGAGATACTCATACTCTGCTCAGGT 843
Query 923 CTCCTCCCAAACCCGAAACTCGAGACCTCTGTTCTTTCCATTTGTCTTACAACATCATCT 982
|| ||||| ||||||||||||||||||||||||||||| ||||||||||||| | | ||
Sbjct 844 CTTCTCCCTAACCCGAAACTCGAGACCTCTGTTCTTTCAATTTGTCTTACAATAGAAACT 903
Query 983 CTCCACTATGTCATTCCAA-TGG-GTATCGGGGCGGCTG-GAAGCGTACGGGTTTCAAAC 1039
| |||||||| ||| || ||| || || ||||||| || || ||| || ||||||
Sbjct 904 TTGCACTATGTGATTTCAGCTGGAGT--CGCCGCGGCTGTGA-GCACACGTGTATCAAAC 960
Query 1040 GAATT-GGGAGCGGGGAATCCGGAGGTTGCTAGGCTGGCAGTGCTTACC-GGTATTT-TC 1096
|||| |||||| |||||||| | ||||||||| | |||| ||| | || ||| ||
Sbjct 961 -AATTTGGGAGCTGGGAATCCTCAAGTTGCTAGGGTTTCAGTA-TTAGCAGGGCTTTGTC 1018
Query 1097 CTTTGGTTCCTAGAGGCTACCATT-TGTAGCACACTTCTCTTCATTTGCAGAAATATCTT 1155
| ||| | ||||| | | | || | ||||| |||||| |||| ||||| || ||| |
Sbjct 1019 -TCTGGATAGTAGAGTC-AGCTTTCTTTAGCATACTTCTATTCACCTGCAGGAACATCAT 1076
Query 1156 CGGGTATGCCTTCAGCAACAGCAAAGAAGTTGTGGACTATGTCA-CAGAGCTATCTCCTT 1214
|| || || ||||||||||||||||||||| |||||||||| | | || ||| ||||||
Sbjct 1077 AGGATACGCATTCAGCAACAGCAAAGAAGTTTTGGACTATGT-AGCTGACCTAACTCCTT 1135
Query 1215 TGCTTTGTATCTCATTTATGGTTGATGGATTTTCGGCAGTGCTTGGTGGGGTTGCTAGGG 1274
|||| || |||| ||||| | || || || | ||||| || ||| ||||||||||
Sbjct 1136 TGCTCTGCCTCTCCTTTATCCTCGACGGCTTCACAGCAGTTCTAAATGGAGTTGCTAGGG 1195
Query 1275 GAAGTGGATGGCAACATATTGGAGCTTGGG-CAA-A-TGTGGTGGCTTACTATCTCCTAG 1331
||||||| |||||||| |||||||||||| ||| | ||| | |||| ||||| |||
Sbjct 1196 GAAGTGGTTGGCAACACATTGGAGCTTGGAACAATACTGTT-T--CTTATTATCTTGTAG 1252
Query 1332 GAGCTCCGGTTGGACTTTTCTTAGGATTTTGGT-GTCACATGAACGGTAAAGGGCTATGG 1390
||||||| |||||| ||| ||||| ||| || || | ||||||| ||||| || |||
Sbjct 1253 GAGCTCCTGTTGGAATTTACTTAGC-TTTCAGTCGTGAGTTGAACGGAAAAGGACTGTGG 1311
Query 1391 AT-CGGTGTAGTGGTTGGGTCTACGGCGCAAGGAA-TCATACTAGCTATAGTCACTGCTT 1448
| |||||| |||||||| ||||| | ||||| | | ||||| ||||| ||||| ||||
Sbjct 1312 -TGCGGTGTTGTGGTTGGATCTACTGTGCAAGCCACT-ATACTGGCTATTGTCACAGCTT 1369
Query 1449 GCATGAGTTGGAATGAGCAGGCTGCCAAGGCAAGAAAGAGAAT 1491
||| | |||||| || ||||||| |||||||| ||||||||
Sbjct 1370 CCATAAATTGGAAGGAACAGGCTGAGAAGGCAAGGAAGAGAAT 1412
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 76957435485
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5