BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg480072
Length=3771
Score E
Sequences producing significant alignments: (Bits) Value
AT2G04235.1 | Symbols: | unknown protein; FUNCTIONS IN: molecu... 2021 0.0
> AT2G04235.1 | Symbols: | unknown protein; FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown;
LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured
cell; Has 713 Blast hits to 345 proteins in 122 species:
Archae - 2; Bacteria - 262; Metazoa - 138; Fungi - 55;
Plants - 39; Viruses - 0; Other Eukaryotes - 217 (source: NCBI
BLink). | chr2:1449414-1455237 FORWARD LENGTH=3981
Length=3981
Score = 2021 bits (1094), Expect = 0.0
Identities = 1470/1642 (90%), Gaps = 63/1642 (4%)
Strand=Plus/Plus
Query 895 CTGCAGGAATCAGGAAGCTTACGTTACACAAAAGAGGCTTCCCTTTCCTCGTCAGCTATT 954
|||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||
Sbjct 961 CTGCAGGAATCAGGAAGCCAACGTTACACAAAAGAGGCTTCCCTTTCCTCGTCAACTATT 1020
Query 955 AGAAGGCAAAGTGCGTTTTTAGTTGGTATGTTGCCTCAGTCCTTATCTTGTGTTACTCCT 1014
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 1021 AGAAGGCAAAGTGCGTTTTTAGTTGGTATGTTGCCTCAGTCTTTATCTTGTGTTACTCCT 1080
Query 1015 TCCCCTAAACAGGGTGGAAGCTTTATGAGCAGGGAAACTCGGGCACTAGTTGAGAGCTTG 1074
||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 1081 TCCCCTACACAGGGTGGAAGCTTTATGAGCAGGGAGACTCGGGCACTAGTTGAGAGCTTG 1140
Query 1075 TCAACTATTCAGAAAAGCAAATCCAGACTTGGATTGATTCCACCCTCCCCTGGTTCTGCT 1134
||||| |||||||||||||||||||||||||| ||||||||||| || ||||||||||||
Sbjct 1141 TCAACCATTCAGAAAAGCAAATCCAGACTTGGTTTGATTCCACCGTCACCTGGTTCTGCT 1200
Query 1135 CTTTCTCAAAGAATTGAGAAATCAAAGCTACAATTATCCGGACACCGTTCTATGGTTACC 1194
||||||||||||||||||||||||||||| ||||||||||||||||||| | || ||||
Sbjct 1201 CTTTCTCAAAGAATTGAGAAATCAAAGCTTCAATTATCCGGACACCGTTTTCTGACTACC 1260
Query 1195 CCAGCAACTGGGAGGGAAGAGATAGGTGTCCTCAGGGAAAAGCATGCAGATATACCCATT 1254
||| ||| |||||||||||| |||||||| |||||||| |||||||| ||||||||||||
Sbjct 1261 CCATCAATTGGGAGGGAAGAAATAGGTGTACTCAGGGATAAGCATGCGGATATACCCATT 1320
Query 1255 ACCAACTTGGAGGATTTGTTATCTAAACATGATAATAGAACACCAATTTCTGAAAAGAAA 1314
||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1321 ACCAACTTGGAGGCTTTGTTATCTAAACATGATAATAGAACACCAATTTCTGAAGAGAAA 1380
Query 1315 AGCATCCCAGATAAGTGTGTTAGTGGTGCATTCAACCCTGCTGTTGAAACTATCGATGAT 1374
||||| |||||||| || ||||||||||||| | || ||||||||| |||| |||||||
Sbjct 1381 AGCATGCCAGATAAATGCATTAGTGGTGCATTGAGCCATGCTGTTGACACTAGCGATGAT 1440
Query 1375 AATAGAACACAAGTTTCAGAAAAGAAAGGCATCCCAGATCGATGCACTAGTGGTGCATTG 1434
|||||||||| |||| ||||| |||||||||| ||||||| ||| | |||||||||||||
Sbjct 1441 AATAGAACACCAGTTCCAGAAGAGAAAGGCATACCAGATCAATGTATTAGTGGTGCATTG 1500
Query 1435 AGCCCTGCTGTTGACACTAGCGTTGATAG-AA--CACCAGTTTTAGAAAAGAAAGGCATC 1491
|||| ||||||||||||||||| ||||| || |||||||| |||| ||||||||||
Sbjct 1501 AGCCATGCTGTTGACACTAGCGATGATAATAAAACACCAGTTCCAGAAGAGAAAGGCATA 1560
Query 1492 CCAGATCGATGCACTAGTGGTGCATTGAGCCCTGCTGTTGACACTAGCGATGATA---GA 1548
||||||| ||||| |||||||||||||| |||||| ||||||||||||||||||| ||
Sbjct 1561 CCAGATCAATGCAGTAGTGGTGCATTGAACCCTGCCGTTGACACTAGCGATGATAATAGA 1620
Query 1549 ACACCAGTTTCA-GAAAAGAAAGGATTG--AGCCC--TGC--T-GT--TGACACT-AGC- 1596
||||||||| || ||||||||||| ||| || | ||| | || || || | |||
Sbjct 1621 ACACCAGTT-CAAGAAAAGAAAGGCTTGCCAGATCAATGCAGTAGTGGTG-CATTGAGCC 1678
Query 1597 --GATG---A---TAG--A--ACA--CCA---GTTTCTGAAAAGAAAGGCATGCCAGATC 1639
| || | ||| | ||| ||| |||||||||||||||||||| |||||||
Sbjct 1679 CTGCTGTTGACACTAGCGATGACAGGCCACCAGTTTCTGAAAAGAAAGGCATACCAGATC 1738
Query 1640 AACACTGTTGTGGTGCATTGATCCCTGCTGTTGACATAAGCGATGTGTTTGCACGCAGAA 1699
||||| |||| ||||||||||| |||||||||||||| ||||||||||||||||| ||||
Sbjct 1739 AACACAGTTGCGGTGCATTGATTCCTGCTGTTGACATTAGCGATGTGTTTGCACGGAGAA 1798
Query 1700 GTCCAGAAGGAAATACTAATTCTGAGATAGAAGGTTCACT--T-TGTAAACAACAACAGA 1756
|||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||
Sbjct 1799 GTCCAGAAGGAAATACTAATTCTGAGATAGAAGGTTCACTGCTCTGTAAACAACAACAGA 1858
Query 1757 GAAATCAGAAAGCTAGCACCCCTGAGAAGTGTGTGTCATCTCTAACAAATTCGTCAAATG 1816
|||||||| ||| |||||||||||||||| ||||||||||| |||||||| ||||||||
Sbjct 1859 GAAATCAGGCAGCCAGCACCCCTGAGAAGTTTGTGTCATCTCCAACAAATTTGTCAAATG 1918
Query 1817 CAA-AACCGTCAGCATTGAAGAAGTTTGCTACTCGTCCAGATCAAGAGCAGCATAGTAAA 1875
||| ||| |||||||| | |||| |||| | ||| || ||||||||||||||||||||||
Sbjct 1919 CAACAAC-GTCAGCATCGGAGAATTTTGTTCCTCTTCAAGATCAAGAGCAGCATAGTAAA 1977
Query 1876 G-C--C-A----T-TGAGACTGGGGAGGGAAATGTGACCAAGGAATGTGCTAGTAATTGT 1926
| | | | | |||||||||||| ||||||||||||||||||| |||||||||||||
Sbjct 1978 GACATCGAAAAATCTGAGACTGGGGATGGAAATGTGACCAAGGAATATGCTAGTAATTGT 2037
Query 1927 TCTATGAATACATTATCCGACAAAGTGGATTCCCTGCTTGCAGAATCTAGCGTATTACTT 1986
||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||
Sbjct 2038 TCTATGAATACATTATCTGAGAAAGTGGATTCCCTGCTTGCAGAATCTAGCGTATTACTT 2097
Query 1987 AGCGAGACAGGCTTCTTGAATGGCTCTGCTCAACAAAAAGAGAAGGACAGTATGCTGAAC 2046
| ||| ||||||||||||||||||||||||||||||| ||||||||||||| ||| ||||
Sbjct 2098 ACCGATACAGGCTTCTTGAATGGCTCTGCTCAACAAAGAGAGAAGGACAGTGTGCGGAAC 2157
Query 2047 AAAAATCAAAACAGAACCAACATCAGTGCTTCCCAGAGTC-TTCTGAAGGATAATAATCA 2105
||||| |||||||||||||| ||||||||| | || | || ||||||| ||||||||||
Sbjct 2158 AAAAAGCAAAACAGAACCAATATCAGTGCTGCTCATA-TCCTTCTGAAAGATAATAATCC 2216
Query 2106 CTTTAAAGTCCATTGTGAAACAGAAGTTATCTCAGCTGAAGACTTTCCTGCTTTAGTTAC 2165
|||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| ||
Sbjct 2217 CTTTAAAGTCCATTGTGAAACAGAAGTTATCTCAGCTGAAGACTTTACTGCTGTAGCTA- 2275
Query 2166 AA-AAAACCTTCCTAGTACCTCTGGCTCTCCATCTATGGACAGGTATG-A-GAATGAGGC 2222
|| |||||||||||||||||||||||||| ||||| ||||||| | | | |||||||||
Sbjct 2276 AAGAAAACCTTCCTAGTACCTCTGGCTCTTCATCTGTGGACAGA-A-GCAAGAATGAGGC 2333
Query 2223 TTCACATGCTAAGGGACCATCCAGATTGAAAAGGAAAGCAGAAGATGTTGATTGTGCCGG 2282
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
Sbjct 2334 TTCACATGCTAAGGGACCATCCAGATTGAAAAGAAAAGCAGAAGATGTTGATTGTGCTGC 2393
Query 2283 TAGAAGTTGTAGCCCCAAAGTCGGGAGAAGTACACTGTATATTTCGAATTCAGTGATGGA 2342
||||| ||||||||||||||||| |||||||||| ||||||||||||||||||||||||
Sbjct 2394 TAGAAATTGTAGCCCCAAAGTCGAGAGAAGTACAAAGTATATTTCGAATTCAGTGATGGA 2453
Query 2343 -CATCCCTAATGGAAACATCGATGCTAACGATTGCCGCAGAGTTCATGAACAAGTGAACT 2401
|| |||| |||||||||| ||||||||||||||||||||||||| ||||||||||||||
Sbjct 2454 ACA-CCCTGATGGAAACATTGATGCTAACGATTGCCGCAGAGTTCGTGAACAAGTGAACT 2512
Query 2402 GGGTAGAAATTCCAGGAAAAGTATCAGAAA-AAATCAATCAAATGCTTGCTCCCTTGGCA 2460
|||||||||||||||||||||||||| || |||||||||||||||||||||| ||||||
Sbjct 2513 GGGTAGAAATTCCAGGAAAAGTATCA-AAGGAAATCAATCAAATGCTTGCTCCATTGGCA 2571
Query 2461 GATAAGCTGAACTCCAGACTGA 2482
|||||||||||||| |||||||
Sbjct 2572 GATAAGCTGAACTCAAGACTGA 2593
Score = 1842 bits (997), Expect = 0.0
Identities = 1192/1284 (93%), Gaps = 22/1284 (2%)
Strand=Plus/Plus
Query 2481 GAAAGTATGTGACGACTTGCGTGGTGCCAAGACAAAGAGACGTGCTGAGAGCAGATCATT 2540
||||||||||||| |||| |||||||||||||||||||||||| |||||| |||||| |
Sbjct 2673 GAAAGTATGTGACCACTTAAGTGGTGCCAAGACAAAGAGACGTGTTGAGAGTAGATCACT 2732
Query 2541 ACTCTGCAAGTTAGCATACGAAAAAGCCAAACTTGAGTTGCTGCACCTCAAGAAAGAGAT 2600
||||||||||||||||||||| ||||| |||||||||||||||||||||||||| |||||
Sbjct 2733 ACTCTGCAAGTTAGCATACGATAAAGCTAAACTTGAGTTGCTGCACCTCAAGAAGGAGAT 2792
Query 2601 AATGATGAAAAAGTTTCAAGCAGTGAGCACCGGTGTACAAACATCCGAAACATTGAGGTT 2660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2793 AATGATGAAAAAGTTTCAAGCAGTGAGCACCGGTGTACAAACATCCGAAACATTGAGGTT 2852
Query 2661 GAATTGTGCGAACTTTCTACGTCAACATGGTTTCCATTCTACTAGCTTGTTGAATCCTGA 2720
||||||||| ||||||||||||||||||||||||| ||||||| ||||||| ||||||||
Sbjct 2853 GAATTGTGCTAACTTTCTACGTCAACATGGTTTCCGTTCTACTGGCTTGTTAAATCCTGA 2912
Query 2721 CCAAGCTCAAGAGGTT-GT-T-ACTAGCAAAGGAGCAGAGATAACACAGGAGATCAAAG- 2776
|||||| ||||||||| | | ||| ||||| |||||||||||||||||||||||||||
Sbjct 2913 CCAAGCACAAGAGGTTATTATAACTGGCAAACGAGCAGAGATAACACAGGAGATCAAAGA 2972
Query 2777 AATTGGACTCCAAAATCAAGAACTTGATTCAATGTTTTACGACGTCCGACACGGTGACA- 2835
|||| ||||| |||||||||||||||||||||||||||||| | | ||||||| |||||
Sbjct 2973 AATT-GACTCAAAAATCAAGAACTTGATTCAATGTTTTACGGCTTGCGACACGATGACAG 3031
Query 2836 GG-AG-AACCGGCATATGCAGACACTATTATGATTGCTGAAGATACTTTGAAAAAGAGAA 2893
|| | | ||||||||||||||||||||||||||||||||||| || |||||||||||||
Sbjct 3032 GGCCGCAGCCGGCATATGCAGACACTATTATGATTGCTGAAGAGACCTTGAAAAAGAGAA 3091
Query 2894 TGAGTTGCAGATCCATACGTCAGGATATTCTGGTCTGGCAAGTTGACAGTTTGGGTGAGT 2953
|||||||||||||| ||||||||||||||||| | ||| ||||||||||||| ||||| |
Sbjct 3092 TGAGTTGCAGATCCCTACGTCAGGATATTCTGATTTGGAAAGTTGACAGTTTAGGTGAAT 3151
Query 2954 GGAATGATTGTCAGAGCATTGTTCTAAACTATAGTGACGTGTTCAACCAAAGGCTCACAT 3013
|||| ||||||||||| ||||||||||||||||||| ||||||||||||||||||||||
Sbjct 3152 GGAACGATTGTCAGAGTATTGTTCTAAACTATAGTGGCGTGTTCAACCAAAGGCTCACAC 3211
Query 3014 TAAAGCCTGGTCATCCTTCATGTGTACTAGTTTCAAACAGTTTGAGTGATAAATTCGTTA 3073
|||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 3212 TAAAGCCTGGCCATCCTTCATGTGTACTAGTTTCAAACAGTTTGAGTGATACATTCGTTA 3271
Query 3074 AGCATTTCCCAGAGATGAATGTTTCAATTGCGTTTAACTCTTTGTTTAACGCTGAAGACA 3133
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 3272 AGCATTTCCCAGAGATGAATGTTTCAATTGCGTTTAACTCTATGTTTAACGCTGAAGACT 3331
Query 3134 CCCGGAAGTATATTGGTGGTTCCAATATATTGTTGGAGATTACACAGAAAACCATTTTGC 3193
|||||| |||||||||||||||||||| ||||||||| |||||||||||||||| |||||
Sbjct 3332 CCCGGAGGTATATTGGTGGTTCCAATACATTGTTGGAAATTACACAGAAAACCAGTTTGC 3391
Query 3194 GCTTACACAATCTGCTAGATGTGGCTGAGGAATTTCATTTAGCTCAAATGAATATACCAA 3253
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3392 TCCTACACAATCTGCTAGATGTGGCTGAGGAATTTCATTTAGCTCAAATGAATATACCAA 3451
Query 3254 ATTTGGTCCAAGGAAACTTTGATTCTCCATCAGCGGAGCTGCTACATTTGCAGATTAACT 3313
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||
Sbjct 3452 ATTTGGTCCAAGGAAACTTTGATTCTCCATCAGCGGAGCAGCTACATTTGCAGATTAGCT 3511
Query 3314 TTCTTGATTGCACAAACTTGAGAAAACTAAGCGTGATTCTCGATGTGACATCTTTGATCC 3373
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 3512 TTCTTGATTGCACAAACTTGAGAAAACTAAGCGTGATTCTCGATGTGACATGTTTGATCC 3571
Query 3374 ATGGGAAGTATCCTAGTGATGTAGTTCCTTGCGAGTTACG-AGAAGTTTCAGGCACAAAA 3432
||||||| ||||||||||||||||||||||||||||| || | |||||||||||||||||
Sbjct 3572 ATGGGAAATATCCTAGTGATGTAGTTCCTTGCGAGTTCCGTA-AAGTTTCAGGCACAAAA 3630
Query 3433 AGAGACGGTGTTGCGTC-AATACAACTGAAGAACGAGATAGACTCTGCAAT-GAATGATG 3490
||||||||||||| ||| || |||||||||||| |||||||| ||| |||| || |||||
Sbjct 3631 AGAGACGGTGTTGTGTCGAA-ACAACTGAAGAAGGAGATAGAATCTACAATTGA-TGATG 3688
Query 3491 TTGGAGTGGGATATCCTCGAATACTGAGACTCTGTCTTTGCATTTCCAAAGCATTGCAAT 3550
||||||||||||||||||| ||| |||||||||||| ||||||||||||||| |||||||
Sbjct 3689 TTGGAGTGGGATATCCTCGGATATTGAGACTCTGTCGTTGCATTTCCAAAGCGTTGCAAT 3748
Query 3551 CACAAAAGAGATGATAACTCATTTTGTAACACT-TT-AACATTTT--ACGGGTTTGGTTT 3606
|| |||||||||||| ||||||| |||||||| || |||||||| || ||||||||||
Sbjct 3749 CAGAAAAGAGATGATGTCTCATTTCGTAACACTCTTTAACATTTTTTACTGGTTTGGTTT 3808
Query 3607 TGTAAATATGGCGGAAGGGCTACTACTACTAGTAGTACCttttgccatttttaatctttt 3666
|||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 3809 TGTAAATATGGCACAAGGGCTACTACTAC-AGTAGTACCTTTTGCCATTTTTAATCTTTT 3867
Query 3667 aaccaaaagttttagtttt-gggttttGTATATGTTGGTGAATACGTTAACCAGTCTTCC 3725
|||||| || ||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 3868 AACCAACAGGTTTAGTTTTTGGGTTTTGTATATGTTGGTGAATACGTTAACCAGTCTTCC 3927
Query 3726 TCGT-TTCGGGTCTTAGTGTAAGA 3748
|||| || || |||||||| ||||
Sbjct 3928 TCGTCTT-GGCTCTTAGTGCAAGA 3950
Score = 664 bits (359), Expect = 0.0
Identities = 420/450 (93%), Gaps = 2/450 (0%)
Strand=Plus/Plus
Query 405 ATTGTCGGATACTACTTTCTCTGAAGAGCACCATGAAATGACGATGGATTCTACTGCGTT 464
||||| ||||||| || |||||||||| |||||||||||||||||||||||||| |||||
Sbjct 513 ATTGTTGGATACTCCTATCTCTGAAGAACACCATGAAATGACGATGGATTCTACGGCGTT 572
Query 465 TTCGATGCATTTTCGGAGTCTTGCTAGGTCAGAGTCTGGAGATGTAAGGACTCCAACAAG 524
||||||||||||||||||||||||||||||||||||||||||||||||||| || || ||
Sbjct 573 TTCGATGCATTTTCGGAGTCTTGCTAGGTCAGAGTCTGGAGATGTAAGGACCCCTACGAG 632
Query 525 CAGCCATCTTCCAGTAGAAGAAAAAACACCAACTGAGGTTACCTCTAGATCTGATACAGG 584
|||||||||| ||||||||| |||||||||||||||||||| || ||||||||||||||
Sbjct 633 TAGCCATCTTCTAGTAGAAGAGAAAACACCAACTGAGGTTACTTCCAGATCTGATACAGG 692
Query 585 AAGTGCAATGGTGTTAACAGAACCTAAGAAGCTATTTCCAAAATCCCCTGTGCCAGTTGA 644
||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||
Sbjct 693 AAGTGCAATGGTGTTAACAGAACCTAAGAAGCTATTTCCAAAATCACCTGTACCAGTTGA 752
Query 645 TAAAGGAAGTGGTGGTAGAGACTCGAATGATATGAGTATTGTGGGTGAAAATTCTCGGAA 704
||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||
Sbjct 753 TAAAGGAAGTGGTGGTAGAGACTCGAATGATATGAGTATCGTCGGTGAAAATTCTCGGAG 812
Query 705 ATATGATTACGGTTATATATCTCCTACACTAGCAGCTTTAATGGGAGATGGAAGCAAGGA 764
|||||||||||| ||| |||||||||||||||||||| |||||||||||| |||||||||
Sbjct 813 ATATGATTACGGGTATCTATCTCCTACACTAGCAGCTCTAATGGGAGATGAAAGCAAGGA 872
Query 765 ATTGCTTCCTGAAGATAATACTGTGGAAGCAAGATCACCTATCGATGAttttttttCGTC 824
||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||
Sbjct 873 ATTGCTTCCTGAAGACAATACTGTGGAAGCAAGATCACCTATCGATGATTTTTCCTCGTC 932
Query 825 TCCT-CAAAATGGATACATGCCCATAGGTC 853
||| | |||||||| ||| ||||||||||
Sbjct 933 -CCTTCCAAATGGATGCATTCCCATAGGTC 961
Score = 532 bits (288), Expect = 7e-150
Identities = 347/374 (93%), Gaps = 9/374 (2%)
Strand=Plus/Plus
Query 1 ATGGCATCGGAAAAGCCAGAAGATCCGATGAACAACACCGCCGGAATAGGAACAGACGAG 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGGCATCGGAAAAGCCAGAAGATCCGATGAACAACACCGCCGGAATAGGAACAGACGAG 60
Query 61 GAGTCTATAGCTCAGCGTCGGAAGCGGCTCCGACGAGTGAGCTTCGCCGACCGGGAAATT 120
|| |||||||| || || ||||||||||| |||||||||||||||||||||||||||||
Sbjct 61 GAATCTATAGCGCAACGGCGGAAGCGGCTAAGACGAGTGAGCTTCGCCGACCGGGAAATT 120
Query 121 ACTTCCGTTCACATTTTCAACCGGGACGAAGATTACGAGACGCCGCCAAACACCTCCGCC 180
||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||
Sbjct 121 ACTTCCGTTCACATTTTCAACCGGGACGAAGATTACGAGACGCCGCCCAATACCTCCGCC 180
Query 181 GCGAAACCACAAAAC---GGTGATACAGCAGAG-C--ATGA--A-GATAAAGTAATTAGG 231
|||||||| |||||| ||||||||| ||||| | |||| | ||||||||||||||
Sbjct 181 GCGAAACCCCAAAACGGTGGTGATACATCAGAGCCTGATGAGGATAATAAAGTAATTAGG 240
Query 232 TTTTTCGGTGAATTATCTGACCGCGAAGATACTGACGGAGATGGTGATGGTGAATACGAA 291
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 241 TTTTTCGGTGAATTATCTGACCGCGAAGATACTGACGGAGATGGTGATGGTGAATACGAA 300
Query 292 GCTATATTGGATAAATCATTCTTGAGACCAAAATATTCACCATCTTCAGGAGGTAGTACT 351
|||| |||||||||||||||||||| || |||||||| ||||||||||||||||| |||
Sbjct 301 CCTATCTTGGATAAATCATTCTTGAGGCCGAAATATTCTCCATCTTCAGGAGGTAGCACT 360
Query 352 GTTGGTTCTGCTAC 365
|||||||| |||||
Sbjct 361 GTTGGTTCCGCTAC 374
Score = 331 bits (179), Expect = 3e-89
Identities = 256/293 (87%), Gaps = 5/293 (2%)
Strand=Plus/Plus
Query 1283 ATGATAATAGAACACCAATTTCTGAAAAGAAAAGCATCCCAGAT-AAGTGTGTTAGTGGT 1341
||||||||||||||||| || | ||| ||||| |||| |||||| || ||| ||||||||
Sbjct 1436 ATGATAATAGAACACCAGTTCCAGAAGAGAAAGGCATACCAGATCAA-TGTATTAGTGGT 1494
Query 1342 GCATTCAACCCTGCTGTTGAAACTATCGATGATAATAGAACACAAGTTTCAGAAAAGAAA 1401
||||| | || ||||||||| |||| ||||||||||| ||||| |||| ||||| |||||
Sbjct 1495 GCATTGAGCCATGCTGTTGACACTAGCGATGATAATAAAACACCAGTTCCAGAAGAGAAA 1554
Query 1402 GGCATCCCAGATCGATGCACTAGTGGTGCATTGAGCCCTGCTGTTGACACTAGCG-T--T 1458
||||| ||||||| ||||| |||||||||||||| |||||| ||||||||||||| | |
Sbjct 1555 GGCATACCAGATCAATGCAGTAGTGGTGCATTGAACCCTGCCGTTGACACTAGCGATGAT 1614
Query 1459 GATAGAACACCAGTTTTAGAAAAGAAAGGCATCCCAGATCGATGCACTAGTGGTGCATTG 1518
|||||||||||||| ||||||||||||| | ||||||| ||||| |||||||||||||
Sbjct 1615 AATAGAACACCAGTTCAAGAAAAGAAAGGCTTGCCAGATCAATGCAGTAGTGGTGCATTG 1674
Query 1519 AGCCCTGCTGTTGACACTAGCGATGATAGAACACCAGTTTCAGAAAAGAAAGG 1571
|||||||||||||||||||||||||| || |||||||||| |||||||||||
Sbjct 1675 AGCCCTGCTGTTGACACTAGCGATGACAGGCCACCAGTTTCTGAAAAGAAAGG 1727
Score = 267 bits (144), Expect = 8e-70
Identities = 226/265 (85%), Gaps = 8/265 (3%)
Strand=Plus/Plus
Query 1283 ATGATAATAGAACACCAATTTCTGAAAAGAAAAGCATCCCAGAT-AAGTG-TGTTAGTGG 1340
||||||||| ||||||| || | ||| ||||| |||| |||||| || || | ||||||
Sbjct 1523 ATGATAATAAAACACCAGTTCCAGAAGAGAAAGGCATACCAGATCAA-TGCAG-TAGTGG 1580
Query 1341 TGCATTCAACCCTGCTGTTGAAACTATCGATGATAATAGAACACAAGTTTC-AGAAAAGA 1399
|||||| |||||||| ||||| |||| ||||||||||||||||| || ||| ||||||||
Sbjct 1581 TGCATTGAACCCTGCCGTTGACACTAGCGATGATAATAGAACACCAG-TTCAAGAAAAGA 1639
Query 1400 AAGGCATCCCAGATCGATGCACTAGTGGTGCATTGAGCCCTGCTGTTGACACTAGCGTTG 1459
||||| | ||||||| ||||| ||||||||||||||||||||||||||||||||||| ||
Sbjct 1640 AAGGCTTGCCAGATCAATGCAGTAGTGGTGCATTGAGCCCTGCTGTTGACACTAGCGATG 1699
Query 1460 ATAGAACACCAGTTT-TAGAAAAGAAAGGCATCCCAGATCGATGCACTAGTGGTGCATTG 1518
| || ||||||||| | |||||||||||||| ||||||| | || | | |||||||||
Sbjct 1700 ACAGGCCACCAGTTTCT-GAAAAGAAAGGCATACCAGATCAACACAGTTGCGGTGCATTG 1758
Query 1519 AGCCCTGCTGTTGACACTAGCGATG 1543
| ||||||||||||| ||||||||
Sbjct 1759 ATTCCTGCTGTTGACATTAGCGATG 1783
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 187825034592
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5