BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg480128 Length=924 Score E Sequences producing significant alignments: (Bits) Value AT2G05060.1 | Symbols: | Protein kinase superfamily protein | ... 1175 0.0 AT2G34290.1 | Symbols: | Protein kinase superfamily protein | ... 361 8e-99 AT2G41920.1 | Symbols: | Protein kinase superfamily protein | ... 322 4e-87 > AT2G05060.1 | Symbols: | Protein kinase superfamily protein | chr2:1798155-1799102 FORWARD LENGTH=948 Length=948 Score = 1175 bits (636), Expect = 0.0 Identities = 854/954 (90%), Gaps = 36/954 (4%) Strand=Plus/Plus Query 1 ATGAGAATTGATCTGTCTGTTCCAAAGTTGAGGGCAGAGTTAGAACTCAACAAGGTTCTC 60 |||||||||||||| |||||||||||| || ||||||||||||||||||||||||||||| Sbjct 1 ATGAGAATTGATCTTTCTGTTCCAAAGGTGGGGGCAGAGTTAGAACTCAACAAGGTTCTC 60 Query 61 GGAAAAGGTTCGTCCGGTTCGGTGAGTCTCATCAAGTACAATG-GACGCCGCGACGGCGA 119 |||||||||||||| |||||||||||||||||||||||||| | | || | ||||||| | Sbjct 61 GGAAAAGGTTCGTCTGGTTCGGTGAGTCTCATCAAGTACAA-GAGTCGACTCGACGGCCA 119 Query 120 AACGCTTTACGCCGCCGTGAAAACCTCCAACATCATTCACGCTGACACTCT-CTACAAAG 178 ||| ||||||||||| ||||||||||||||||| |||||||| ||| |||| || ||||| Sbjct 120 AACACTTTACGCCGCGGTGAAAACCTCCAACATAATTCACGCCGACTCTCTCCT-CAAAG 178 Query 179 AGTTTCAGATCTTGTCCGAATTCAAAGGATGTTCAAGAATCGTCCAATGCTATGGGACCA 238 |||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| | Sbjct 179 AGTTTCAGATCTTGTCCGAATTCAAAGGCTGTTCGAGAATCGTCCAATGCTATGGGACAA 238 Query 239 AAGTAGAAGAGAGAATCACCGACGACGGTGACGTAGAGTTCAAGATTCACATGGAGTACG 298 ||||| |||||| ||||| ||| || |||||||||||||||| ||||| |||||| || | Sbjct 239 AAGTACAAGAGACAATCAACGAAGAAGGTGACGTAGAGTTCACGATTCCCATGGAATATG 298 Query 299 CATCTGGAGGAAGCTTGAGAAATTTTATGAGCAGATTCAAGGAAATGAAATTGCCTGATC 358 |||||||||||||||||||| |||||||||| ||||||||||| ||||||||||||||| Sbjct 299 CATCTGGAGGAAGCTTGAGACATTTTATGAGTAGATTCAAGGACATGAAATTGCCTGATG 358 Query 359 CTTTGATCAGAAGGTTTACGCGTATGATTCTTGAGGGTTTAGCAGTTATTCATGGACACG 418 |||||||||||||||||||||||||||| || |||||||||||||||||||||||||||| Sbjct 359 CTTTGATCAGAAGGTTTACGCGTATGATCCTCGAGGGTTTAGCAGTTATTCATGGACACG 418 Query 419 GCTATGTTCACTGCGATCTCAAACCCGAAAACATCCTCGTTTTCCCGAGTTTCGAGTTAA 478 | ||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||| Sbjct 419 GTTATGTTCACTGCGATCTAAAACCCGAAAACATCCTTGTTTTCCCGAGTTTCGAGTTAA 478 Query 479 AGATTTCTGATTTCGGGTTGTCCAAAAGAGAGGGAGATAACAACTGGTGGCTTCCTAGTC 538 |||||||||||||||||||||| |||||||| ||||||| || |||||||||||||||| Sbjct 479 AGATTTCTGATTTCGGGTTGTCTAAAAGAGAAGGAGATAGTAAATGGTGGCTTCCTAGTC 538 Query 539 ATCCTTTTGCGGGAACACCGATATATATGTCGCCGGAATCCATTTCT-ACGGGCGAGACA 597 |||| ||||||||||||||| ||||||||||||| ||||| |||||| || ||||| ||| Sbjct 539 ATCCGTTTGCGGGAACACCGGTATATATGTCGCCTGAATCGATTTCTAAC-GGCGAAACA 597 Query 598 AGGAGAGGTTTGG----A---T--TT---ATG-GT--CGTT--AG--G---A-T-G---T 630 ||||||||||||| | | || ||| || ||| || | | | | Sbjct 598 AGGAGAGGTTTGGATTTATGGTCATTAGGATGTGTGGTGTTGGAGATGTACACTGGAAAG 657 Query 631 AGACCATGGTGGGATAAAAACTATGACTTGGAAGATCTCAAGAAAGGTTACATGCCATTG 690 ||||||||||||||||| ||||||||||||| |||||| |||||||||| |||||||||| Sbjct 658 AGACCATGGTGGGATAAGAACTATGACTTGGGAGATCTTAAGAAAGGTTCCATGCCATTG 717 Query 691 ATTCCGAAAGATATTCCTTGTGATGCAAAACTCTTTGTGATGAGTTGTTTTGCGGCGGAG 750 ||| ||||||||||||||||||||||||||||||||||||||| ||| || ||| ||||| Sbjct 718 ATTTCGAAAGATATTCCTTGTGATGCAAAACTCTTTGTGATGACTTGCTTCGCGTCGGAG 777 Query 751 ACTGACAAGAGAAAAAACGCTTTCACATTGTTGAGGCATTGCTTCTTGCGTGGAGATGTT 810 ||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 778 ACTAACAAGAGAAAAAACGCTTTCACATTGTTGAGGCATTGCTTCTTGCGTGGGGATGTT 837 Query 811 AATAAGATCATAGAGCCTCTCGTGATGAAGAATGAGAATTCTAATGATATAGCACTAGAG 870 ||||||||||||||||||||||||| || | | |||||||||||||||||||||||||| Sbjct 838 AATAAGATCATAGAGCCTCTCGTGAAGA-GTA--AGAATTCTAATGATATAGCACTAGAG 894 Query 871 TTGGAGAAAATTGAGCTCAGGTTTTCGCAACTTAGGTGTATTAGTGGTGAATAG 924 |||||||| ||||| | |||| ||||||||||||||||||||||||||| |||| Sbjct 895 TTGGAGAATATTGAACACAGGCTTTCGCAACTTAGGTGTATTAGTGGTGGATAG 948 > AT2G34290.1 | Symbols: | Protein kinase superfamily protein | chr2:14472633-14473430 REVERSE LENGTH=798 Length=798 Score = 361 bits (195), Expect = 8e-99 Identities = 474/603 (79%), Gaps = 41/603 (7%) Strand=Plus/Plus Query 52 AAGGT-TCTCGGAAAAGGTTCGTCCGGTTCGGTGAGTCTCATCAAG-TACAATGGACGCC 109 ||||| ||| || ||||||||| || |||||||| || || || || || |||| Sbjct 12 AAGGTATCTGGGGGAAGGTTCGTTTGGATCGGTGAGCCTTTTC-AGTTATAAAAGACGAT 70 Query 110 GCGACGGCGAAACGCTTTACGCCGCCGTGAAAACCTCCAACATCATTCACGCTGACACTC 169 |||||| || || || |||||||||||||||||||| || | | ||| | ||| Sbjct 71 GCGACGTTGAGACTCTCTACGCCGCCGTGAAAACCTCTGAC--GA-T---GCTAAGTCTC 124 Query 170 TCTACAAAGAGTTTCAGA-TCTTGTCCGAATTCAAAGGATGTTCAAGAATCGTCCAATGC 228 ||||| |||||||||||| || |||| ||||||| || || || ||||||||||||||| Sbjct 125 TCTACGAAGAGTTTCAGATTC-TGTCTAAATTCAAGGGTTGCTCGAGAATCGTCCAATGC 183 Query 229 TATGGGACCAAAGTAGAAGAGAGAATCACCGACGACGGTGACGTAGAGTTCAAGATTCAC 288 || || | | ||||||| ||||| | | |||| | ||| ||||||||| || ||||| | Sbjct 184 TACGGTAGCGGAGTAGAACAGAGACTTAACGACAAGGGTTACGTAGAGTACACGATTC-C 242 Query 289 -ATGGAGTACGCATCTGGAGGAAGCTTGAGAAATTTTAT-GAGCAGATTCAAGGA-AATG 345 |||||||||||| | |||||||||||||| |||| || || | ||||||| || || Sbjct 243 TATGGAGTACGCAGCCGGAGGAAGCTTGAGCGATTTCATGGA-CCGATTCAACGACAA-A 300 Query 346 AAATTGCCTGATCCTTTGATCAGAAGGTTTACGCGTATGATTCTTGAGGGTTTAG-CAGT 404 |||||||||||||| ||||||||| |||||| |||||| |||| |||||||||| || Sbjct 301 AAATTGCCTGATCCGATGATCAGAAAGTTTACTCGTATGCTTCTCGAGGGTTTAGCCA-C 359 Query 405 TATTCATGGACACGGCTATGTTCACTGCGATCTCAAACCCGAAAACATCCTCGTTTTCCC 464 ||||| |||||||||||||||||||||||||||||||||| |||||||| |||||||| Sbjct 360 AATTCACAGACACGGCTATGTTCACTGCGATCTCAAACCCGAGAACATCCTTGTTTTCCC 419 Query 465 -GAGTT-T--C-GAG-T-T-AAA--GA---TTTCTGATTTCGGGTTGTCCAAAAGAGAGG 511 | ||| | | | | | | ||| || |||||||||| |||||||| |||||||| | Sbjct 420 TG-GTTCTGTCTGCGATCTCAAATTGAAGATTTCTGATTTTGGGTTGTCGAAAAGAGATG 478 Query 512 GAGATAACAAC-TGGTGGCTTCCTAGTCA-TCCTTTTGCGGGAACACCGATATATATGTC 569 |||| | | || ||||||| |||| | | || | | |||||||||||||| |||||||| Sbjct 479 GAGACA-CTACGTGGTGGCATCCTCTTAAATCGTAT-GCGGGAACACCGATCTATATGTC 536 Query 570 GCCGGAATCCATTTCT-ACGGGCGAGACAAGGAGAGGT-TTGGATTTATGGTCGTTAGGA 627 |||||| || || ||| ||||| |||| | ||| ||| ||| | ||||||||||| ||| Sbjct 537 GCCGGAGTCTATCTCTCACGGG-GAGATAGGGAAAGGACTTG-ACTTATGGTCGTTGGGA 594 Query 628 TGT 630 ||| Sbjct 595 TGT 597 > AT2G41920.1 | Symbols: | Protein kinase superfamily protein | chr2:17499404-17500452 FORWARD LENGTH=1049 Length=1049 Score = 322 bits (174), Expect = 4e-87 Identities = 334/410 (81%), Gaps = 16/410 (4%) Strand=Plus/Plus Query 68 GTTCGTCCGGTTCGGTGAGTCTCATCAAGTACAATGGACGCCGCGACGGCGAAACGCTTT 127 |||||| ||||||||||||||| |||||||||| ||| ||||||||||| || | | Sbjct 88 GTTCGTTTGGTTCGGTGAGTCTCTTCAAGTACAAAAGACAACGCGACGGCGAGACTCAAT 147 Query 128 ACGCCGCCGTGAAAACCTCCAAC-ATC-ATTCACGCTGACACTCTCTACAAAGAGTTTCA 185 |||||||||||||||| || | | | | | | ||| | ||||||||||||||||||| Sbjct 148 ACGCCGCCGTGAAAACATCTAGCGA-CGA-AAATGCTAAGTCTCTCTACAAAGAGTTTCA 205 Query 186 GATCTTGTC-CGAATTCAAAGGATGTTCAAGAATCGTCCAATGCTATGGGACCAAAGTAG 244 |||| | || | ||||||| || ||||| ||||||||||||||||| |||| |||| Sbjct 206 GATCCTCTCTC-AATTCAAGGGTTGTTCGAGAATCGTCCAATGCTACGGGAATGGAGTAA 264 Query 245 AAGAGAGAATCACCGACGACGGTGACGTAGAGTTCAAGATT-CACATGGAGTACGCATCT 303 |||||| | | | |||| | ||| ||||||| | ||||||| | |||||||||||||| | Sbjct 265 AAGAGATATTTAACGACAAGGGTTACGTAGAATACAAGATTGC-CATGGAGTACGCATTT 323 Query 304 GGAGGAAGCTTGAGAAATTTTAT-GAGCAGATTCAAGGAAATG-AAATTGCCTGATCCTT 361 |||||||||||||| |||| || || | ||||||| || | | |||||| ||||| | Sbjct 324 GGAGGAAGCTTGAGCGATTTCATGGA-CCGATTCAAAGACA-GAAAATTGTCTGATTCGA 381 Query 362 TGATCAGAAG-GTTTACGCGTATGATTCTTGAGGGTTTAG-CAGTTATTCATGGACACGG 419 ||||||| || |||||| |||||| |||| |||||||||| || ||||| ||||||| Sbjct 382 TGATCAG-AGAGTTTACTCGTATGCTTCTCGAGGGTTTAGCCA-CGATTCACAGACACGG 439 Query 420 CTATGTTCACTGCGATCTCAAACCCGAAAACATCCTCGTTTTCCCGAGTT 469 |||||||||||||||||||||||||||||||||||| |||||||| |||| Sbjct 440 CTATGTTCACTGCGATCTCAAACCCGAAAACATCCTTGTTTTCCCTAGTT 489 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 45160498153 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5