BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg480132
Length=288
Score E
Sequences producing significant alignments: (Bits) Value
AT3G20090.1 | Symbols: CYP705A18 | cytochrome P450, family 705,... 353 4e-97
AT2G05190.1 | Symbols: | pseudogene, cytochrome P450 -related,... 342 9e-94
AT4G15360.1 | Symbols: CYP705A3 | cytochrome P450, family 705, ... 289 1e-77
AT3G20960.1 | Symbols: CYP705A33 | cytochrome P450, family 705,... 270 4e-72
> AT3G20090.1 | Symbols: CYP705A18 | cytochrome P450, family 705,
subfamily A, polypeptide 18 | chr3:7015797-7018360 FORWARD
LENGTH=1720
Length=1720
Score = 353 bits (191), Expect = 4e-97
Identities = 256/287 (89%), Gaps = 5/287 (2%)
Strand=Plus/Plus
Query 1 CCTGACGAGTTTAAGCCGGAGAGGTTTCTAAGTTCTTCAAG-T--GGGAAAGATGAGGAG 57
||||||||||||||||| |||||||||||||||| |||||| | ||| |||| || |||
Sbjct 1327 CCTGACGAGTTTAAGCCAGAGAGGTTTCTAAGTTATTCAAGATCAGGGCAAGAAGACGAG 1386
Query 58 AAAGAGCAAGCGTTTAAGTACCTTCCTTTTGGCGGCGGTAGGGGAGGATGTCCTGGAGGT 117
||||||||| | ||||||||||| ||||||| ||||| ||| |||||||||||||| ||
Sbjct 1387 AAAGAGCAAACACTTAAGTACCTTTCTTTTGGTGGCGGAAGGAGAGGATGTCCTGGA-GT 1445
Query 118 -AATCTAGCTTCTATATTTGTAGTAACCGCAATTGGAGTGATGGTGCAGTGCTTTGACTG 176
||||||| || ||||||||| | ||| ||||| ||| ||||||||||||||||||||||
Sbjct 1446 AAATCTAGGTTATATATTTGTTGGAACTGCAATAGGAATGATGGTGCAGTGCTTTGACTG 1505
Query 177 GAAAATCAAAGGAGATAAGGTCAACATGGAAGAGACTTATGAAGGAATGAACCTAAGCAT 236
||||||| ||||||||||||||||||||||||||||||||| |||||||||||||| |||
Sbjct 1506 GAAAATCGAAGGAGATAAGGTCAACATGGAAGAGACTTATGGAGGAATGAACCTAACCAT 1565
Query 237 GGTTCATCCGCTTAAGTGCACACCAGTTCCTCGAAGCCAACCTTTTT 283
|||| | |||||||||||||| ||||||||||||| |||||||||||
Sbjct 1566 GGTTAACCCGCTTAAGTGCACTCCAGTTCCTCGAACCCAACCTTTTT 1612
> AT2G05190.1 | Symbols: | pseudogene, cytochrome P450 -related,
blastp match of 34% identity and 2.0e-07 P-value to SP|Q42798|C931_SOYBN
Cytochrome P450 93A1 (EC 1.14.-.-). (Soybean)
{Glycine max} | chr2:1878725-1879018 FORWARD LENGTH=294
Length=294
Score = 342 bits (185), Expect = 9e-94
Identities = 238/262 (91%), Gaps = 9/262 (3%)
Strand=Plus/Plus
Query 27 TCTAAGTTCTTCAAGTGGGAAAGATGAGGAGAAAGAGCAAGCGTTTAAGTACCTTCCTTT 86
||||||||||||||||||| |||| | ||| || | | |||||||||||||||||||
Sbjct 42 TCTAAGTTCTTCAAGTGGGCAAGA--A-GAG-AA-A-C---CGTTTAAGTACCTTCCTTT 92
Query 87 TGGCGGCGGTAGGGGAGGATGTCCTGGAGGTAATCTAGCTTCTATATTTGTAGTAACCGC 146
||||||||| ||| |||||||||||||||||||| |||||| ||||||||| | ||| ||
Sbjct 93 TGGCGGCGGGAGGAGAGGATGTCCTGGAGGTAATTTAGCTTATATATTTGTTGGAACTGC 152
Query 147 AATTGGAGTGATGGTGCAGTGCTTTGACTGGAAAATCAAAGGAGATAAGGTCAACATGGA 206
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 153 AATTGGAGTGATGGTGCAGTGCTTTGACTGGAAAATCAAAGGAGATAAAGTCAACATGGA 212
Query 207 AGAGACTTATGAAGGAATGAACCTAAGCATGGTTCATCCGCTTAAGTGCACACCAGTTCC 266
|||||||| |||||||||||||||||||||||||||||| ||||| ||||| |||||||
Sbjct 213 AGAGACTTTTGAAGGAATGAACCTAAGCATGGTTCATCCACTTAAATGCACTCCAGTTCT 272
Query 267 TCGAAGCCAACCTTTTTATTAA 288
||||||||||||||||| ||||
Sbjct 273 TCGAAGCCAACCTTTTTTTTAA 294
> AT4G15360.1 | Symbols: CYP705A3 | cytochrome P450, family 705,
subfamily A, polypeptide 3 | chr4:8770185-8771899 FORWARD
LENGTH=1631
Length=1631
Score = 289 bits (156), Expect = 1e-77
Identities = 238/276 (86%), Gaps = 12/276 (4%)
Strand=Plus/Plus
Query 10 TTTAAGCCGGAGAGGTTTCTAAGTTCTTCAAG-T--GGGAAAGATGAGGAGAAAGAGCAA 66
|||||||| ||||||||||||| ||||||||| | ||| |||| || || ||| || |
Sbjct 1258 TTTAAGCCAGAGAGGTTTCTAACTTCTTCAAGATCAGGGGAAGAGGATGA-AAA-AG--A 1313
Query 67 GCGTTTAAGTACCTTCCTTTTGGCGGCGGTAGGGGAGGATGTCCTGGAGGTAATCTAGCT 126
|| |||||| |||||||||||| |||| ||| ||||||||||||||| || || | |
Sbjct 1314 GC--TTAAGTTTCTTCCTTTTGGCAGCGGAAGGAGAGGATGTCCTGGAGCAAACCTTGGT 1371
Query 127 TCTATATTTGTAGTAACCGCAATTGGAGTGATGGTGCAGTGCTTTGACTGGAAAATCAAA 186
||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1372 TCTATATTTGTAGGAACCGCAATAGGAGTGATGGTGCAGTGCTTTGACTGGAAAATCAAA 1431
Query 187 GGAGATAAGGTCAACATGGAAGAGACTTATGAAGGAATGAACCT-AAGCATGGTTCATCC 245
| |||||||||||||||||||||||||| ||||||||||| ||| || |||||||||||
Sbjct 1432 GAAGATAAGGTCAACATGGAAGAGACTTTTGAAGGAATGACCCTGAAA-ATGGTTCATCC 1490
Query 246 GCTTAAGTGCACACCAGTTCCTCGAAGCCAACCTTT 281
||||| ||||| || |||| ||||| |||||||||
Sbjct 1491 GCTTACTTGCACTCC-GTTCTTCGAACCCAACCTTT 1525
> AT3G20960.1 | Symbols: CYP705A33 | cytochrome P450, family 705,
subfamily A, polypeptide 33 | chr3:7345436-7347104 FORWARD
LENGTH=1583
Length=1583
Score = 270 bits (146), Expect = 4e-72
Identities = 232/272 (85%), Gaps = 11/272 (4%)
Strand=Plus/Plus
Query 7 GAGTTTAAGCCGGAGAGGTTTCTAAGTTCTTCAAG--TGGGA-AAGAT-GAGGAGAAAGA 62
||||||||||||||||||||| || |||||||||| | ||| ||| | || |||| |||
Sbjct 1182 GAGTTTAAGCCGGAGAGGTTTTTAGGTTCTTCAAGATTAGGACAAG-TAGACGAGAGAGA 1240
Query 63 GCAAGCGT-TTAAGTACCTTCCTTTTGGCGGCGGTAGGGGAGGATGTCCTGGAGGTAATC 121
| |||| | |||||| ||||||| ||||| || ||| |||| |||||||||| ||||
Sbjct 1241 GGAAGC-TCAGAAGTACATTCCTTTCGGCGGAGGAAGGAGAGGCTGTCCTGGAGCAAATC 1299
Query 122 TAGCTTCTATATTT-GTAGTAACCGCAATTGGAGTGATGGTGCAGTGCTTTGACTGGAAA 180
|||||||||| ||| |||| |||||| |||||||||||||||||||||||||||||| |
Sbjct 1300 TAGCTTCTAT-TTTCGTAGGAACCGCGATTGGAGTGATGGTGCAGTGCTTTGACTGGGGA 1358
Query 181 ATCAAAGGAGATAAGGTCAACATGGAAGAGACTTATGAAGGAATGAACCTAAGCATGGTT 240
||||||||||||||| |||||||||||||||||| ||||||| ||| ||| | |||||||
Sbjct 1359 ATCAAAGGAGATAAGATCAACATGGAAGAGACTTTTGAAGGACTGACCCTTACCATGGTT 1418
Query 241 CATCCGCTTAAGTGCACACC-AGTTCCTCGAA 271
||||| |||||||||| || | |||||||||
Sbjct 1419 CATCCAATTAAGTGCACTCCGA-TTCCTCGAA 1449
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 13270685736
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5