BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg480186
Length=3451
Score E
Sequences producing significant alignments: (Bits) Value
AT2G05710.1 | Symbols: ACO3 | aconitase 3 | chr2:2141399-214667... 5365 0.0
AT4G26970.1 | Symbols: ACO2 | aconitase 2 | chr4:13542918-13548... 1447 0.0
AT2G05715.1 | Symbols: | glutamyl-tRNA(Gln) amidotransferase B... 189 2e-46
AT1G48520.1 | Symbols: GATB | GLU-ADT subunit B | chr1:17940100... 189 2e-46
> AT2G05710.1 | Symbols: ACO3 | aconitase 3 | chr2:2141399-2146678
FORWARD LENGTH=3493
Length=3493
Score = 5365 bits (2905), Expect = 0.0
Identities = 3248/3410 (95%), Gaps = 37/3410 (1%)
Strand=Plus/Plus
Query 65 CCTCCATGATCGTTCCCAATTGATCAATCACA-AACCTTATCTTCTTCTTCTTCTCTGTC 123
|||||||||||| ||||||||||||||||| | ||||||||||||||| |||||||||||
Sbjct 95 CCTCCATGATCGATCCCAATTGATCAATCA-ATAACCTTATCTTCTTCATCTTCTCTGTC 153
Query 124 AGTATCTGAATCTGCATCTGGAAGCGTGATTTCATCATCATGTATATAACTgcttcatct 183
||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||
Sbjct 154 AGTATCTGAATCTGCATCTGGAAGCGTGATTTCATCATCATGTATTTAACCGCTTCATCT 213
Query 184 tccgcttcttcctctatcattcgagctgcttcttctcgctcttcttcactcttctccttc 243
|||||||||||||| ||||| |||||||||||||||||||||||||| || ||||| |||
Sbjct 214 TCCGCTTCTTCCTCCATCATCCGAGCTGCTTCTTCTCGCTCTTCTTCTCTTTTCTCTTTC 273
Query 244 cGATCGTTTTTATCTCCGTCCGTTTCATCTACTTCACCGTCGTCACTTCTCGGTCGTAGA 303
|||||| |||||||||| ||||||||||||||||| |||||||| ||||||| |||||||
Sbjct 274 CGATCGGTTTTATCTCCCTCCGTTTCATCTACTTCTCCGTCGTCTCTTCTCGCTCGTAGA 333
Query 304 TCTTTTGGTACCATTTCACCTGCTTTTCGTTCATTTCC-TCGCTGGAGCCATTGCTTTCA 362
||||||||||||||||| || | | | | ||||| |||||||||||||| ||||||
Sbjct 334 TCTTTTGGTACCATTTC-CC--C---T-G--C-TTTCCGTCGCTGGAGCCATTCCTTTCA 383
Query 363 CTCAAAACCATCTCCGTTTCGCTTAACCACTCAGATCAGAGCTGTTTCTCCAGTCTTAGA 422
||| |||||||||||||||||||| ||| |||||||||||||||||||||||||||||||
Sbjct 384 CTCGAAACCATCTCCGTTTCGCTTCACCTCTCAGATCAGAGCTGTTTCTCCAGTCTTAGA 443
Query 423 TCGTCTCGAGAGAACCTTCTCTTCCATGGCGTCAGAGCATCCGTTTAAAGGGATCTTCAC 482
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 444 TCGTCTCCAGAGAACCTTCTCTTCCATGGCGTCAGAGCATCCGTTTAAAGGGATCTTCAC 503
Query 483 TACTCTTCCTAAGCCTGGTGGTGGTGAATTCGGAAAGTTCTATAGCTTACCTGCTCTTAA 542
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 504 TACACTTCCTAAGCCTGGTGGTGGTGAATTCGGAAAGTTCTATAGCTTACCTGCTCTTAA 563
Query 543 TGATCCACGAATTGATAAACTTCCTTACTCTATTAGGATTCTTCTTGAATCTGCGATTCG 602
||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 564 CGATCCACGAGTTGATAAACTTCCTTACTCTATTAGGATTCTGCTTGAATCTGCGATTCG 623
Query 603 TAATTGTGATAACTTTCAAGTTACTAAGGAAGATGTTGAGAAGATTATTGACTGGGAAAA 662
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 624 TAATTGTGATAACTTTCAAGTTACTAAGGAAGATGTTGAGAAGATTATTGACTGGGAAAA 683
Query 663 AACATCTCCTAAACAAGTCGAGATTCCGTTTAAACCGGCTCGTGTTCTTCTTCAGGACTT 722
||||||||||||||||| |||||||| |||||||| |||||||||||||||||||||||
Sbjct 684 GACATCTCCTAAACAAGTAGAGATTCCTTTTAAACCAGCTCGTGTTCTTCTTCAGGACTT 743
Query 723 TACTGGAGTCCCAGCTGTTGTTGACCTTGCTTGTATGCGTGATGCGATGAATAAGCTGGG 782
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 744 TACGGGAGTCCCAGCTGTTGTTGACCTTGCTTGTATGCGTGATGCGATGAATAAGCTGGG 803
Query 783 CAGTGATTCCAACAAAATCAATCCTTTGGTTCCGGTGGATCTTGTGATTGATCACTCGGT 842
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 804 AAGTGATTCCAACAAAATCAATCCCTTGGTTCCGGTGGATCTTGTGATTGATCACTCGGT 863
Query 843 TCAAGTTGATGTTGCTAGATCTGAGAATGCAGTGCAAGCAAACATGGAGCTTGAGTTCCA 902
|||||| ||||| ||| |||| ||||||||||||||||||||||||||||||||||||||
Sbjct 864 TCAAGTAGATGTAGCTCGATCAGAGAATGCAGTGCAAGCAAACATGGAGCTTGAGTTCCA 923
Query 903 GAGGAACAAGGAGAGGTTTGCTTTCCTTAAGTGGGGTTCTACTGCGTTCCAGAACATGCT 962
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 924 GAGGAACAAGGAGAGGTTTGCTTTCCTTAAATGGGGTTCTACTGCGTTCCAGAACATGCT 983
Query 963 TGTTGTGCCTCCTGGCTCTGGTATTGTGCATCAGGTCAATTTGGAATATCTTGGAAGAGT 1022
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 984 TGTTGTGCCTCCTGGCTCTGGTATTGTGCATCAGGTCAATTTGGAATATCTTGGAAGAGT 1043
Query 1023 TGTGTTCAATACCAAAGGCCTTCTCTACCCAGACAGCGTGGTTGGAACTGATTCACATAC 1082
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1044 TGTGTTCAATACCAAAGGCCTTCTCTACCCAGACAGCGTGGTTGGAACTGATTCACATAC 1103
Query 1083 AACTATGATTGATGGTTTGGGAGTTGCTGGATGGGGAGTTGGAGGCATTGAAGCTGAGGC 1142
|||||||||||||||||||||||||||||||||||| ||||| || ||||||||||||||
Sbjct 1104 AACTATGATTGATGGTTTGGGAGTTGCTGGATGGGGTGTTGGGGGTATTGAAGCTGAGGC 1163
Query 1143 AACAATGCTTGGGCAGCCCATGAGTATGGTATTGCCTGGTGTTGTTGGATTCAAACTGGC 1202
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1164 AACAATGCTTGGCCAGCCCATGAGTATGGTATTGCCTGGTGTTGTTGGATTCAAACTTGC 1223
Query 1203 CGGAAAAATGCGTAATGGTGTAACAGCTACTGATTTGGTTCTAACAGTGACTCAAATGCT 1262
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1224 CGGAAAAATGCGTAATGGTGTAACAGCTACTGATTTGGTTCTAACAGTGACTCAAATGCT 1283
Query 1263 GAGGAAGCATGGTGTTGTTGGAAAGTTTGTTGAGTTTTATGGTGATGGTATGAGTGGGCT 1322
|||||||||||| |||||||||||||||||||||||||||||| |||| |||||||||||
Sbjct 1284 GAGGAAGCATGGCGTTGTTGGAAAGTTTGTTGAGTTTTATGGTAATGGCATGAGTGGGCT 1343
Query 1323 GTCCCTAGCTGACAGGGCAACCATTGCCAACATGTCTCCCGAGTATGGTGCAACCATGGG 1382
|||||||||||||||||| || |||||||| |||||||||||||||||||||||||||||
Sbjct 1344 GTCCCTAGCTGACAGGGCGACAATTGCCAATATGTCTCCCGAGTATGGTGCAACCATGGG 1403
Query 1383 CTTCTTCCCTGTGGATCATGTTACTCTACAGTATCTCAAATTGACTGGAAGAAGCGATGA 1442
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1404 CTTCTTCCCTGTGGATCATGTTACTCTACAATATCTCAAATTGACTGGAAGAAGCGATGA 1463
Query 1443 GACAGTGGCCATGATTGAAGCATATCTTCGCGCAAACAATATGTTTGTTGACTACAATGA 1502
||||||||| |||||||||||||||||||| || ||||||||||||||||||||||||||
Sbjct 1464 GACAGTGGCTATGATTGAAGCATATCTTCGGGCTAACAATATGTTTGTTGACTACAATGA 1523
Query 1503 GCCTCAGCAAGACCGGGTCTACTCATCATATCTAGAACTGAACCTGGATAATGTTGAACC 1562
|||||||||||||||||| ||||| ||||||||||||||||| |||||| ||||||||||
Sbjct 1524 GCCTCAGCAAGACCGGGTTTACTCGTCATATCTAGAACTGAATCTGGATGATGTTGAACC 1583
Query 1563 TTGCATTTCTGGACCAAAGCGGCCACATGATCGTGTTACTTTGAAGGATATGAAAGCTGA 1622
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 1584 TTGCATTTCTGGACCAAAGCGGCCACATGATCGTGTTACTTTGAAGGAAATGAAAGCTGA 1643
Query 1623 CTGGCATTCATGTCTTGACAGTAAAGTTGGGTTCAAGGGTTTTGCTATACCTAAAGAGGC 1682
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1644 CTGGCATTCATGTCTTGACAGTAAAGTTGGGTTCAAGGGTTTTGCTATACCTAAAGAGGC 1703
Query 1683 ACAAGAAAAAGTGGTAAATTTTTCGTTCAATGGACAACCAGCAGAGCTTAAACATGGAAG 1742
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 1704 ACAAGAAAAAGTGGTAAATTTTTCGTTCGATGGACAACCAGCAGAGCTTAAACATGGAAG 1763
Query 1743 TGTGGTGATTGCTGCAATCACAAGCTGTACTAATACATCAAATCCCAGCGTCATGCTTGG 1802
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1764 TGTGGTGATTGCTGCAATCACAAGCTGTACTAATACATCAAATCCCAGCGTCATGCTTGG 1823
Query 1803 TGCTGGTCTTGTTGCAAAGAAGGCTTGTGACCTTGGACTACAGGTTAAGCCTTGGATAAA 1862
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1824 TGCTGGTCTTGTTGCAAAGAAGGCTTGTGACCTTGGGCTACAGGTTAAGCCTTGGATAAA 1883
Query 1863 GACAAGTCTTGCGCCGGGCTCAGGAGTTGTTACAAAATACTTATTAAAGAGTGGACTGCA 1922
|||||||||||| || ||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1884 GACAAGTCTTGCTCCAGGCTCAGGAGTTGTTACAAAATACTTATTAAAGAGTGGATTGCA 1943
Query 1923 AGAATATCTGAATGAACAGGGTTTCAATATTGTCGGCTACGGGTGCACTACATGCATTGG 1982
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1944 AGAATATCTGAATGAACAGGGTTTCAATATTGTCGGCTACGGGTGCACTACATGCATCGG 2003
Query 1983 GAATTCTGGAGAAATTAATGAATCAGTGGGAGCTGCTATTACCGAAAATGACATTGTGGC 2042
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2004 GAATTCTGGGGAAATTAATGAATCAGTGGGAGCTGCTATTACCGAAAATGACATTGTGGC 2063
Query 2043 GGCTGCTGTTCTTTCCGGGAACAGGAACTTTGAGGGGCGTGTTCATCCTCTAACAAGAGC 2102
||||||||| || ||||| ||||||||||||||||||||||||||||| |||||||||||
Sbjct 2064 GGCTGCTGTGCTATCCGGTAACAGGAACTTTGAGGGGCGTGTTCATCCACTAACAAGAGC 2123
Query 2103 CAACTACCTTGCTTCTCCTCCTTTGGTGGTTGCCTATGCTCTTGCTGGCACGGTTAACAT 2162
||| |||||||| |||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 2124 CAATTACCTTGCATCTCCTCCGTTGGTGGTTGCCTATGCTCTTGCTGGCACGGTTAACAT 2183
Query 2163 TGACTTTGAAACGGAGCCTATTGGCACTGGAAAGAATGGCAAGGATGTCTTCCTAAGAGA 2222
|||||||||||||||||||||||||| ||||||||||||||||| |||||| |||||||
Sbjct 2184 TGACTTTGAAACGGAGCCTATTGGCAAAGGAAAGAATGGCAAGGACGTCTTCTTAAGAGA 2243
Query 2223 TATCTGGCCAACCACGGAAGAAATTGCTGAGGTTGTTCAATCCAGTGTTTTGCCTGACAT 2282
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2244 TATCTGGCCAACCACGGAAGAAATTGCTGAGGTTGTTCAATCCAGTGTTTTGCCTGACAT 2303
Query 2283 GTTCCGAGCAACATACGAGTCAATCACCAAGGGTAACCCCATGTGGAATAAGCTGTCTGT 2342
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2304 GTTCCGAGCAACGTACGAGTCAATCACCAAGGGTAACCCCATGTGGAATAAGCTGTCTGT 2363
Query 2343 TCCTGAAAATACCCTTTACTCATGGGATCCCAACTCTACTTACATTCACGAGCCTCCATA 2402
|||||| |||||||| |||||||||||||||||||| |||||||||||||||||||||||
Sbjct 2364 TCCTGAGAATACCCTCTACTCATGGGATCCCAACTCAACTTACATTCACGAGCCTCCATA 2423
Query 2403 CTTTAAGGACATGACCATGGATCCTCCAGGGCCACACAATGTGAAGGATGCTTACTGTTT 2462
||| ||||||||||||||||||||||| || |||||||||||||||||||||||||||||
Sbjct 2424 CTTCAAGGACATGACCATGGATCCTCCTGGTCCACACAATGTGAAGGATGCTTACTGTTT 2483
Query 2463 GCTCAATTTTGGGGACAGTATCACCACTGATCACATTTCACCAGCTGGGAACATCCAAAA 2522
||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||
Sbjct 2484 ACTCAATTTTGGGGACAGTATCACCACTGATCACATCTCACCAGCTGGAAACATCCAAAA 2543
Query 2523 GGACAGTCCTGCTGCAAAGTTTCTCATCGAGCGTGGCATTGACCGTAAGGACTTCAACTC 2582
||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||
Sbjct 2544 GGACAGTCCTGCTGCAAAGTTTCTCATGGAGCGTGGCGTTGACCGTAAGGACTTCAACTC 2603
Query 2583 ATATGGAAGTCGCCGTGGGAATGATGAAATAATGGCCAGAGGCACTTTTGCTAATATCCG 2642
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 2604 ATATGGAAGTCGCCGTGGGAATGATGAAATAATGGCCAGAGGTACTTTTGCTAATATCCG 2663
Query 2643 TATCGTTAACAAGCTCATGAATGGTGAAGTTGGCCCTAAGACGGTTCACATTCCATCTGG 2702
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 2664 TATCGTTAACAAGCTCATGAATGGTGAAGTTGGCCCTAAGACTGTTCACATTCCATCTGG 2723
Query 2703 AGAGAAGCTCTCAGTCTTCGATGCAGCCATGAGGTACAAGTCATCTGGTGAAGACACAAT 2762
|||||||||||||||||| || || |||||||||||||||||||||||||||||||||||
Sbjct 2724 AGAGAAGCTCTCAGTCTTTGACGCTGCCATGAGGTACAAGTCATCTGGTGAAGACACAAT 2783
Query 2763 TATTCTTGCTGGAGCTGAATATGGAAGTGGTAGCTCACGTGATTGGGCTGCCAAGGGACC 2822
|||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 2784 TATTCTGGCTGGAGCTGAGTATGGAAGTGGTAGCTCACGTGATTGGGCTGCCAAGGGACC 2843
Query 2823 CATGCTACAGGGCGTTAAAGCGGTGATTGCAAAGAGTTTTGAGAGGATTCACCGAAGCAA 2882
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2844 CATGCTACAGGGTGTTAAAGCGGTGATTGCAAAGAGTTTTGAGAGGATTCACCGAAGCAA 2903
Query 2883 CTTGGTGGGAATGGGAATCATTCCCCT-GTGCTTTAAGTCCGGGGAAGATGCAGATACTC 2941
||||||||||||||||||||| ||| | ||||||||||||||| ||||| ||||||||||
Sbjct 2904 CTTGGTGGGAATGGGAATCAT-CCCATTGTGCTTTAAGTCCGGTGAAGACGCAGATACTC 2962
Query 2942 TTGGATTGACTGGTCACGAACGCTACACAATCAATCTCCCAACCGATATCTCAGAGATAA 3001
|||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||
Sbjct 2963 TTGGATTGACTGGTCACGAACGCTACACGATCCATCTCCCAACCGATATCTCAGAGATAA 3022
Query 3002 GACCTGGCCAAGATGTTACTGTCACTACCGACAACGGGAAATCTTTCACTTGCACAGTCC 3061
||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||
Sbjct 3023 GACCTGGCCAAGATGTTACCGTCACTACCGACAACGGAAAATCTTTCACTTGCACAGTCC 3082
Query 3062 GCTTCGACACAGAGGTGGAATTGGCATACTTCAACCATGGAGGCATACTTCCATATGTTA 3121
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 3083 GCTTCGACACAGAGGTGGAATTGGCATACTTTAACCATGGAGGCATACTTCCATATGTTA 3142
Query 3122 TCAGAAACTTGAGCAAGCAATAG--AC--A--CAAT-------TTATGGAGCAAAATAAA 3168
||||||||||||||||||||||| | | |||| |||||||||||||||||
Sbjct 3143 TCAGAAACTTGAGCAAGCAATAGTGAAGGAAGCAATACACAAGTTATGGAGCAAAATAAA 3202
Query 3169 AGAGA-TTT-TTTCTGTTT-AAAGTTGTCATTTTTAAAAGGCAGATAAGTCTGTCTAGGA 3225
|||| ||| ||||||||| ||| | ||| ||||||||||||||||||||||||||||||
Sbjct 3203 AGAGTGTTTGTTTCTGTTTTAAAAT-GTCTTTTTTAAAAGGCAGATAAGTCTGTCTAGGA 3261
Query 3226 TTAGGTTAAAAGGTGAGTGATCTCATGCAATATGA-GAGTTGCAGTGTGTTATT---ACA 3281
||||||||||||||||||||||||||||||||| | ||||| ||||| |||||| |||
Sbjct 3262 TTAGGTTAAAAGGTGAGTGATCTCATGCAATAT-ATGAGTTTCAGTGGGTTATTCTTACA 3320
Query 3282 CGTTTGGGCTCCCAAGTTTTGCAACTTGCAACCGCTCAATGTTATTGTTTTTGGAAAGGA 3341
|| || |||||||| |||| ||||||||||| | | ||| |||||||||||| ||||||
Sbjct 3321 CGCTTAGGCTCCCATGTTTCGCAACTTGCAAGAGTTGAATATTATTGTTTTTGAAAAGGA 3380
Query 3342 ATAAGAGAGCCTTCCTGCATATTCCCATTGCTGACTCCCAAATACCTCGCAATCCGTTGC 3401
|||||||||||||| |||||||||||||| |||||||||||| ||||||||||| |||||
Sbjct 3381 ATAAGAGAGCCTTCTTGCATATTCCCATTACTGACTCCCAAAGACCTCGCAATCTGTTGC 3440
Query 3402 ATTTCACAAGCGTATTCAGCAGCTTCTATACCACTTCTCATATCAGGTTC 3451
||||||||||||||||||||||| ||||||||| |||||| |||| ||||
Sbjct 3441 ATTTCACAAGCGTATTCAGCAGCATCTATACCAATTCTCAGATCATGTTC 3490
Score = 65.8 bits (35), Expect = 3e-09
Identities = 39/41 (95%), Gaps = 0/41 (0%)
Strand=Plus/Plus
Query 1 CACACAGACCTAGGCATTTTCGTTTCGTCTCCACACGCCTC 41
||| ||| |||||||||||||||||||||||||||||||||
Sbjct 1 CACGCAGCCCTAGGCATTTTCGTTTCGTCTCCACACGCCTC 41
> AT4G26970.1 | Symbols: ACO2 | aconitase 2 | chr4:13542918-13548629
FORWARD LENGTH=3349
Length=3349
Score = 1447 bits (783), Expect = 0.0
Identities = 2090/2711 (77%), Gaps = 130/2711 (5%)
Strand=Plus/Plus
Query 446 CCATGGCGTCAGAGCA-TCCGTTTA-AAGG-GATCTTCACTACTCTTCCTAAGCCTGGTG 502
||||||| || ||||| ||| || |||| || || || | ||||||||| |||||||
Sbjct 449 CCATGGCTTCTGAGCATTCC---TACAAGGATATTTTGACAAGTCTTCCTAAACCTGGTG 505
Query 503 GTGGTGAAT-TCGGAAAGTTCTA-TAGCTTACCTGCTCTT-AATGATCCACGAATTGATA 559
|||| || | | ||||||| ||| | | ||||| ||| || || |||||| |||||||||
Sbjct 506 GTGGAGAGTAT-GGAAAGTACTACTCG-TTACCAGCT-TTAAACGATCCAAGAATTGATA 562
Query 560 AACTTCC-TTACTCTATTAGGATTCTTCTT-GAATCTGCGATTCGTAATTGTGATAACTT 617
| || || || ||| | ||||| | | || ||||| ||||||||||| ||||| ||||
Sbjct 563 AGCTGCCATT-TTCTGTAAGGATAC-TATTGGAATCAGCGATTCGTAACTGTGACAACTA 620
Query 618 TCAAGTTACTAAGGAAGATGTTGAGAAGATTATTGACTGGGAAAAAACATCTCCTAAACA 677
|||||| || ||||| || |||||||| || |||||||||| || |||||| |||| ||
Sbjct 621 TCAAGTCACAAAGGATGACGTTGAGAAAATCCTTGACTGGGAGAATACATCTACTAAGCA 680
Query 678 AGTCGAGATT-CCGTTTAAACCGGCTCGTGTTCTTCTT-CAGGACTTTACTGGAGTCCCA 735
|| || ||| || || || || || |||||| |||| |||||||| |||||||| |||
Sbjct 681 GGTTGAAATTGCC-TTCAAGCCAGCCCGTGTT-ATCTTACAGGACTTCACTGGAGTACCA 738
Query 736 GCTGTTGTTGACCTTGCTTGTATGCGTGATGCGA-TGAATAAGCTGGGCAGTGATTCC-A 793
| | | ||||| ||||||| |||| | ||||| | |||| || || || ||||| ||| |
Sbjct 739 GTTCTAGTTGATCTTGCTTCTATGAGGGATGC-AGTGAAGAATCTTGGTAGTGA-TCCTA 796
Query 794 ACAAAATCAATCCTTTGGTTCCGGTGGATCTTGT-GATTGATCACTCGGTTCAAGTTGA- 851
||| ||||| || |||||||| || |||||||| | ||||||||||| | ||||||||
Sbjct 797 GCAAGATCAACCCCTTGGTTCCTGTTGATCTTGTCG-TTGATCACTCGATCCAAGTTGAC 855
Query 852 TGTTGCTAGATCTG-AGAATGCAGTGCA-AGCAAACA--TGGAGCTTGAGTTCCAGAGGA 907
| |||| || || | || |||| ||| || ||| | |||||||||| ||| | ||||
Sbjct 856 T-TTGCAAGGTCAGAAG-ATGC--CGCACAG-AAAAATTTGGAGCTTGAATTCAAAAGGA 910
Query 908 ACAAGGAGAGGTTTGCTTTCCTTAAGTGGGGTTCTACTGCGTTCCAGAACATGCTTGTTG 967
|||| || || ||| | ||||||||||||||||| || || ||||| |||||||| || |
Sbjct 911 ACAAAGAAAGATTTACGTTCCTTAAGTGGGGTTCAACAGCCTTCCAAAACATGCTGGTCG 970
Query 968 TGCCTCCTGGCTCTGGTATTGTGCATCAGGTCAATTTGGAATATCTTGGAAGAGTTGTGT 1027
| |||||||| ||||| ||||| ||||||||||| |||||||| |||||| | ||||| |
Sbjct 971 TTCCTCCTGGGTCTGGGATTGTCCATCAGGTCAACTTGGAATACCTTGGACGTGTTGTTT 1030
Query 1028 TCAA-TACCAAAGGCCTTCTCTACCCAGACAGCGTGGTTGGAACTGATTCACATACAACT 1086
|||| | | ||||| |||||||||| || ||||| |||||||| || || || |||||
Sbjct 1031 TCAACT-CGAAAGGATTTCTCTACCCTGATAGCGTTGTTGGAACCGACTCCCACACAACC 1089
Query 1087 ATGATTGATGGTTTGGGAGTTGCTGGATGGGGAGTTGGAGGCATTGAAGCTGAGGCAACA 1146
||||||||||| || ||||| ||||| ||||| |||||||| ||||| || |||||| ||
Sbjct 1090 ATGATTGATGGATTAGGAGTCGCTGGGTGGGGTGTTGGAGGAATTGAGGCAGAGGCAGCA 1149
Query 1147 ATGCTTGGGCAGCCCATGAGTATGGTATTGCCTGGTGTTGTTGGATTCAAACTGGCCGGA 1206
|||||||| ||||||||||| ||||| || ||||| || || || || || ||| |||
Sbjct 1150 ATGCTTGGTCAGCCCATGAGCATGGTGTTACCTGGCGTGGTCGGGTTTAAGTTGGATGGA 1209
Query 1207 AAAATG-CGTAATGGTGTAACAGCTACTGATTTGGTTCTAACAGTGACTCAAATGCTGAG 1265
|| || | || || || || ||||||||||| ||||| || ||||| ||||| ||||
Sbjct 1210 AAGTTGAAGGAA-GGGGTTACTGCTACTGATTTAGTTCTCACTGTGACCCAAATATTGAG 1268
Query 1266 GAAGCATGGTGTTGTTGGAAAGTTTGTTGAGTTTTATGGTGATGGTATGAGTGGGCTGTC 1325
||||||||||||||| || ||||||||||| ||||||||||| || ||||||| || ||
Sbjct 1269 GAAGCATGGTGTTGTCGGCAAGTTTGTTGAATTTTATGGTGAGGGGATGAGTGAACTTTC 1328
Query 1326 CCTAGCTGACAGGGCAACCATTGCCAACATGTCTCCCGAGTATGGTGCAACCATGGGCTT 1385
|| ||||| || || || ||||| || ||||||||||||||||| ||||| ||||| ||
Sbjct 1329 ACTGGCTGATAGAGCCACAATTGCAAATATGTCTCCCGAGTATGGAGCAACTATGGGTTT 1388
Query 1386 CTTCCCTGTGGATCATGTTACTCTACAGTATCTCAAATTGACTGGAAGAAGCGATGAGAC 1445
|||||| |||||||||||||| || |||| || || ||||| |||||||||||||| ||
Sbjct 1389 CTTCCCAGTGGATCATGTTACACTGGAGTACCTGAAGTTGACAGGAAGAAGCGATGAAAC 1448
Query 1446 AGTGGCCATGATTGAAGCATATCTT-CGCGCAAACAATATGTTTGTTGACTACAATGAGC 1504
||| | ||||| ||| ||||| || ||||||||||||||||||||||||||||| ||||
Sbjct 1449 TGTGTCAATGATAGAATCATAT-TTGCGCGCAAACAATATGTTTGTTGACTACAACGAGC 1507
Query 1505 CTCAGCAAGACCGGGTC-TACTCATCATATCTAGAACTGA-ACCTGG-ATAATGTTGAAC 1561
|||||||||| | | | ||| |||| ||||| | | | | | ||| | | ||||||||
Sbjct 1508 CTCAGCAAGAAAGAG-CATACACATCTTATCT-GCAGTTAGATTTGGGACA-TGTTGAAC 1564
Query 1562 CTTGCATTTCTGGACC-AAAGCGGCCACATGATCGTGTTACTTTGAAGGATATGAAAGCT 1620
| || |||||||| || ||| |||| ||||| || || || |||| |||||||| |||
Sbjct 1565 CATGTATTTCTGGTCCTAAAA-GGCCTCATGACCGAGTGCCTCTGAAAGATATGAAGGCT 1623
Query 1621 GACTGGCATTCATGTCTTGACAGTAAAGTTGGGTTCAAGGGTTTTGCTA-TACCTAAAGA 1679
||||||||| |||| ||||||| | ||||| |||||||||||||| | | || |||||
Sbjct 1624 GACTGGCATGCATGCCTTGACAATCCTGTTGGATTCAAGGGTTTTGC-AGTGCCAAAAGA 1682
Query 1680 GGCACAAGAAAAAGTGGTAAATTTTTCGTTCAATGGACAACCAGCAGAGCTTAAACATGG 1739
||||||| |||| || || || || | ||| |||||||| || ||| | || |||||
Sbjct 1683 AAAACAAGAAGAAGTTGTGAAGTTCTCATACAACGGACAACCTGCTGAGATCAAGCATGG 1742
Query 1740 AAGTGTGGTGATTGCTGCAATCACAAGCTGTACTAATACATCAAATCCC-AGCGTCATGC 1798
||||| || ||||| ||||| || || ||||| || || ||||| ||| || ||||||
Sbjct 1743 TAGTGTTGTTATTGCGGCAATTACTAGTTGTACAAACACGTCAAA-CCCTAGTGTCATGA 1801
Query 1799 TTGGTGCTGGTCTTGTTGCAAAGAAGGCTTGTGACCTTGGACT-ACAGGTTAAGCCTTGG 1857
| || || | || |||||||| || |||| || ||||| || | |||| || || |||
Sbjct 1802 TCGGAGCAGCACTCGTTGCAAAAAAAGCTTCAGATCTTGGCCTGA-AGGTAAAACCATGG 1860
Query 1858 ATAAAGACAAGTCTTGCGCC-GGG-CTCAGGAGTTGTT-ACAAAATACTT--ATTAAAGA 1912
| |||||||||||||| || ||| || || |||||| | ||| || || || |||
Sbjct 1861 GTTAAGACAAGTCTTGCTCCAGGGTCT-AG-AGTTGTCGAGAAA-TATTTGGATCGAAGT 1917
Query 1913 GTGGACTGCAAGAATATCT-GAATGAA-CAGGGTTTC-AATATTGTCGGCTACGGGTGCA 1969
| || || | ||| | || || || || || ||| || |||||||||||||| ||||
Sbjct 1918 G-GG-CTCCGAGAGTC-CTTGACC-AAGCAAGGATTCGAA-ATTGTCGGCTACGGCTGCA 1972
Query 1970 CTACATGCATTGGGAATTCTGGAGAAA-TTAATGAATCAGTGGGAGCTGCTATT-ACCGA 2027
| |||||||||||||||||||| || || | | ||| | | ||||||| | ||
Sbjct 1973 CAACATGCATTGGGAATTCTGGC-AACCTTGACCCAGAAGTTGCATCTGCTATAGAAGGA 2031
Query 2028 AAATGACATTGTGGCGGCTGCTGTTCTTTCCGGGAACAGGAACTTTGAGGGGCGTGTTCA 2087
| ||| || | | |||||||| || || || ||| | |||||||| || ||||||||
Sbjct 2032 AC-TGATATCATCCCAGCTGCTGTGCTGTCTGGAAACCGAAACTTTGAAGGTCGTGTTCA 2090
Query 2088 TCCTCTAACAAGAGCCAACTACCTTGCTTCTCCTCCTTTGGTGGTTGCCTATGCTCTTGC 2147
||| | ||||||||| ||||| ||||| || || || || || ||||| ||||| |||||
Sbjct 2091 TCCACAAACAAGAGCAAACTATCTTGCGTCACCACCATTAGTTGTTGCTTATGCCCTTGC 2150
Query 2148 TGGCACGGTTAACATTGACTTTGA-AACGGAGCCTATTGGCACTGGAAA-GAATGGCAAG 2205
||| ||||| ||||||| ||||| || | ||||||| || || ||| || ||| ||
Sbjct 2151 TGGAACGGTGGACATTGATTTTGAGAAAG-AGCCTATAGGAACCAGAAGTGA-TGGAAAA 2208
Query 2206 -GATGTCTTCCTAAGAGATATCTGGCCAACCACGGAAGAAATTGCTGAGGTTGTTCAATC 2264
| ||| | ||| || ||| | ||||||| || || ||| ||||| ||||||||||||
Sbjct 2209 AG-TGTGTACCTGAGGGATGTATGGCCAAGCAATGAGGAAGTTGCTCAGGTTGTTCAATA 2267
Query 2265 CAGTGTTTTGCCT-GACATGTTCC-GAGCAACATACGAGTCAATCACCA-AGGGTAACCC 2321
|| || | || | ||||||| |||| | ||||| |||| || | |||| |||||
Sbjct 2268 TAGCGTGCTACCAAG-CATGTTCAAGAGCT-CGTACGAAACAATAAC-AGAGGGAAACCC 2324
Query 2322 CATGTGGAAT-AAGCTGTCTGTTCCTGAAAATACC-C-TT-TACTCATGGGATCCCAACT 2377
| |||||||| || || |||| || || | || | || || || |||||||| ||||
Sbjct 2325 CTTGTGGAATGAA-CTCTCTGCACC-GAGT-T-CCACGTTATATTCTTGGGATCCAAACT 2380
Query 2378 CTACTTACATTCACGAGCCTCCATACTTT-AAGGACATGACCATGGATCCTCCAGGGCCA 2436
| || |||||||| || ||||| || ||| ||| | |||||| |||| || || ||
Sbjct 2381 CCACGTACATTCATGAACCTCCGTA-TTTCAAGAATATGACCGCAAATCCACCTGGTCCT 2439
Query 2437 CAC-AATGTGAAGGATGCTTACTGTTTGCTCAATTTTGGGGACAGTATCACCACTGATCA 2495
| || ||||||||||||||||| ||| | || |||||||||||| | || || || ||
Sbjct 2440 CGTGAA-GTGAAGGATGCTTACTGCTTGTTGAACTTTGGGGACAGTGTAACAACAGACCA 2498
Query 2496 CATTTCACCAGCTGGGAACATCCAAAAGGAC-AGTCCTGCTGCAAAGTTTCTCATCGAGC 2554
||| || ||||| || ||||| ||||| || |||||||||||||||||||| || || |
Sbjct 2499 CATCTCTCCAGCAGGAAACATTCAAAAA-ACTAGTCCTGCTGCAAAGTTTCTAATGGACC 2557
Query 2555 GTGGCATTGAC--CGTAAGGACTTCAACTCATATGGAAGTCGCCGTGGGAAT-GATGAAA 2611
|||| | || || ||| | |||||||||||||||||||| | ||||| || ||
Sbjct 2558 GTGGTGT-GATTTCGGAAG-ATTTCAACTCATATGGAAGTCGAAG-GGGAAACGACGAGG 2614
Query 2612 TAATGGC-CAGAGGCACTTTTGCTAATATCCGTATCGTTAACAAGCTCATGAATGGTGAA 2670
| ||||| | | || || ||||| ||||||||||| |||||||||||| |||| || |||
Sbjct 2615 TTATGGCTC-GTGGTACATTTGCCAATATCCGTATTGTTAACAAGCTCTTGAAAGGAGAA 2673
Query 2671 GTTGGCCCTAAGACGGTTCACATTCC-ATCTGGAGAGAAGCTCTCAG--TCTTCGATGCA 2727
|||||||| || || ||||||||||| | ||||||||||||| | || | |||||||||
Sbjct 2674 GTTGGCCCCAACACTGTTCACATTCCGA-CTGGAGAGAAGCT-T-AGCGTTTTCGATGCA 2730
Query 2728 GCCA-TGAGGTACAAGTCATCTGGTGAAGACACAATTATTCTTGCTGGAGCTGAATATGG 2786
|| | | | |||||| | ||| | || || || || || ||||| ||||| |||||
Sbjct 2731 GCAAGTAAA-TACAAGACCGCTGAACAGGATACGATCATCCTGGCTGGTGCTGAGTATGG 2789
Query 2787 AAGTGGTAGCTCACGTGATTGGGCTGCCAAGGGACCCATGCTACAGGGCGTTAAAGCGGT 2846
|||||||||||| || ||||||||||| ||||| ||| |||| ||| || ||||| ||
Sbjct 2790 AAGTGGTAGCTCTCGGGATTGGGCTGCAAAGGGTCCCTTGCTTTTGGGAGTGAAAGCTGT 2849
Query 2847 GATTGCAAAGAGTTTTGAGAGGATTCACCGAAGCAACTTGG-TGGGAATGGGAATCATTC 2905
||||| ||||| |||||||| || || || |||||| ||| ||| | |||| |||||||
Sbjct 2850 AATTGCCAAGAGCTTTGAGAGAATCCATCGCAGCAACCTGGCTGGTA-TGGGGATCATTC 2908
Query 2906 CCCTGTGCTTT-AAGTCCGGGGAAGATGCAGATACTCTTGGATTGACTGGTCACGAACGC 2964
| ||||| ||| ||| | ||||| || || || || |||||| | |||||||| ||||||
Sbjct 2909 CTCTGTG-TTTCAAGGCTGGGGAGGACGCGGAAACCCTTGGACTCACTGGTCATGAACGC 2967
Query 2965 TACACAATCAATCTCCCAACCGATA-TCTCAGAGATA--AGACCTGGCCAAGATGTTACT 3021
|||||| || | || || || | | | | || || | ||||| || ||||| || |||
Sbjct 2968 TACACAGTCCACCTTCCTACAAA-AGT-T-AGTGACATTAGACCCGGTCAAGACGTCACT 3024
Query 3022 GTCACTACCGACAACGGGAAATC-TTTCACTTGCACAGTCCGCTTCGACACAGAGGTGGA 3080
|| || || |||| || ||||| ||| || |||| | || || || |||||||||||
Sbjct 3025 GTAACCACTGACAGTGGCAAATCCTTTGTCT-GCACCCTGCGTTTTGATACAGAGGTGGA 3083
Query 3081 ATTGGCATACT 3091
|||||||||||
Sbjct 3084 ATTGGCATACT 3094
> AT2G05715.1 | Symbols: | glutamyl-tRNA(Gln) amidotransferase
B family protein, similar to SP|O30509 Aspartyl/glutamyl-tRNA(Asn/Gln)
amidotransferase subunit B (EC 6.3.5.-) (Asp/Glu-ADT
subunit B) {Bacillus subtilis}; no suitable start codon
was identified. This may be a pseudogene. | chr2:2146547-2147042
REVERSE LENGTH=396
Length=396
Score = 189 bits (102), Expect = 2e-46
Identities = 120/129 (93%), Gaps = 0/129 (0%)
Strand=Plus/Minus
Query 3323 TTATTGTTTTTGGAAAGGAATAAGAGAGCCTTCCTGCATATTCCCATTGCTGACTCCCAA 3382
|||||||||||| |||||||||||||||||||| |||||||||||||| |||||||||||
Sbjct 396 TTATTGTTTTTGAAAAGGAATAAGAGAGCCTTCTTGCATATTCCCATTACTGACTCCCAA 337
Query 3383 ATACCTCGCAATCCGTTGCATTTCACAAGCGTATTCAGCAGCTTCTATACCACTTCTCAT 3442
| ||||||||||| |||||||||||||||||||||||||||| ||||||||| ||||||
Sbjct 336 AGACCTCGCAATCTGTTGCATTTCACAAGCGTATTCAGCAGCATCTATACCAATTCTCAG 277
Query 3443 ATCAGGTTC 3451
|||| ||||
Sbjct 276 ATCATGTTC 268
> AT1G48520.1 | Symbols: GATB | GLU-ADT subunit B | chr1:17940100-17942822
FORWARD LENGTH=2020
Length=2020
Score = 189 bits (102), Expect = 2e-46
Identities = 106/108 (98%), Gaps = 0/108 (0%)
Strand=Plus/Minus
Query 3344 AAGAGAGCCTTCCTGCATATTCCCATTGCTGACTCCCAAATACCTCGCAATCCGTTGCAT 3403
|||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 871 AAGAGAGCCTTCTTGCATATTCCCATTACTGACTCCCAAATACCTCGCAATCCGTTGCAT 812
Query 3404 TTCACAAGCGTATTCAGCAGCTTCTATACCACTTCTCATATCAGGTTC 3451
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 811 TTCACAAGCGTATTCAGCAGCTTCTATACCACTTCTCATATCAGGTTC 764
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 171771612832
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5