BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg480195
Length=2214
Score E
Sequences producing significant alignments: (Bits) Value
AT2G05810.1 | Symbols: | ARM repeat superfamily protein | chr2... 3238 0.0
AT2G05812.1 | Symbols: | Potential natural antisense gene, loc... 2891 0.0
> AT2G05810.1 | Symbols: | ARM repeat superfamily protein | chr2:2214012-2217159
REVERSE LENGTH=2282
Length=2282
Score = 3238 bits (1753), Expect = 0.0
Identities = 2086/2242 (93%), Gaps = 42/2242 (2%)
Strand=Plus/Plus
Query 1 ACAAATTATGGCATCAAGAGAAATAGATTTGTCATCAAAGTACACATCACC-AAAAGT-A 58
||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||| |
Sbjct 14 ACAAACTATGGCATCAAGAGAAATAGATTTGTCATCAAAGTACACATCACCTAAAAGTAA 73
Query 59 AAATTGACAAAACAGAGCTTGTCCTCACGCCTCTCTC-TTTTCCCGGCAACAA-T--TAA 114
|||| ||||||| ||| |||||||||||||||||||| ||||||||||||||| | ||
Sbjct 74 AAATAGACAAAAGAGACCTTGTCCTCACGCCTCTCTCTTTTTCCCGGCAACAACTAACAA 133
Query 115 CAACA---CTTTACCTTTCTCTCTAAGGCAAAACCCTTCTCTTATGTGACCACTCCTCCA 171
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 134 CAACACTTCTTTACCTTTCTCTCTAAGGCAAAACCCTTCTCTTATGTGACCACTCCTCCA 193
Query 172 TGCATCACTCCTCCGCCGCCGTCTCCGGCGAACTCACAAAACCACCAACAGCTCCACTCC 231
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 194 TGCATCCCTCCTCCGCCGCCGTCTCCGGCGAACTCACAAAACCACCAACAGCTCCACTCC 253
Query 232 AACCACTTCTTGACTTAATCACAAACGtcctctccctcctcctcctctcttccctcACCG 291
|||||||| ||||| |||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 254 AACCACTTGTTGACCTAATAACAAACGTCCTCTCCCTCCTCCTCCTCTCTTCCCTCACCG 313
Query 292 TCCGTTCCTTCATCGGCCGTTGGCAAATCCTCCGATCCAAACTCTTCTCACTAAACTCAT 351
|||||||||||||||| || ||||||||||||||||||||||||||| ||||||||||||
Sbjct 314 TCCGTTCCTTCATCGGACGGTGGCAAATCCTCCGATCCAAACTCTTCACACTAAACTCAT 373
Query 352 CTCTCTCTTCCTTATCCGAATCACCTCACTGGTCACAAAAtcctctcctccacactctcc 411
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 374 CTCTCTCTTCCTTATCCGAATCACCTCACTGGTCACAAAATCCTCTCCTCCACACTCTCC 433
Query 412 ttccttctctcctctcaaatctccaacgcctcacttcactctccGACCAATGCTCCTCCG 471
| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 434 TCCCTTCTCTCCTCTCAAATCTCCAACGCCTCTCTTCACTCTCCGACCAATGCTCCTCCG 493
Query 472 CTTCATTCTCCGGTGGTAAACTTCTCATGCAAAGCGACCTCGATATCGCTTCCTCTTCAC 531
||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| |
Sbjct 494 CTTCATTCTCCGGTGGTAAACTTCTCATGCAAAGCGACCTCGACATAGCTTCCTCTTCCC 553
Query 532 TCTCCACTCACATAAGCGACCTTGACCTCCTCCTCAGATCTGGTGTCCTCCACCAACAAA 591
|||| ||||||||||| ||||||||||||||||||||||| |||||||||||||||||||
Sbjct 554 TCTCTACTCACATAAGTGACCTTGACCTCCTCCTCAGATCCGGTGTCCTCCACCAACAAA 613
Query 592 ACGCTATCGTTTTATCACTCCCACCTCCAACTTCAGATAAAGATGACATTGCTTTCTTCA 651
|||| |||||||||||||||||||| ||||| |||||||||||||||||||| |||||||
Sbjct 614 ACGCCATCGTTTTATCACTCCCACCACCAACATCAGATAAAGATGACATTGCCTTCTTCA 673
Query 652 TCAGAGATCTCTTCACTCGTCTCCAAATCGGTGGAGCTGAATTCAAGAAA-AAATCTTTA 710
||||||| |||||||||||||||||||||||||||||||| ||||| ||| |||||| ||
Sbjct 674 TCAGAGACCTCTTCACTCGTCTCCAAATCGGTGGAGCTGAGTTCAA-AAAGAAATCTCTA 732
Query 711 GAATCTCTTCTTCAACTTCTCACCGATAACGAAAAATCCGCAAGAATCATAGCTAAAGAA 770
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 733 GAATCTCTTCTTCAACTTCTCACCGATAACGAAAAATCCGCAAGAATCATAGCTAAAGAA 792
Query 771 GGTAATGTTAGTTACTTAGTCACTCTTCTTGATCTCCATCACCATCCTCTGATCCGTGAG 830
||||||||| |||||||||| ||||||||||||||||||||||||||||| |||||||||
Sbjct 793 GGTAATGTTGGTTACTTAGTAACTCTTCTTGATCTCCATCACCATCCTCTAATCCGTGAG 852
Query 831 CATGCACTCGCCGCCGTCTC-CTTATTAACTTCATCAAGCGTCGATTCGAGAAAGACGGT 889
|| ||||||||||||||||| | | ||||||||||| |||| ||| ||||||||||||||
Sbjct 853 CACGCACTCGCCGCCGTCTCGC-TGTTAACTTCATCGAGCGCCGACTCGAGAAAGACGGT 911
Query 890 GTTCGAACAAGGCGGATTAGGTCCATTACTACGATTACTCGAAACCGGATCTCCACCGTT 949
|||||||||||||||||||||||||||||||||||| || |||||||||||| |||||||
Sbjct 912 GTTCGAACAAGGCGGATTAGGTCCATTACTACGATTGCTAGAAACCGGATCTTCACCGTT 971
Query 950 GAAAACAAGAGCTGCGGTGGCGATTGAAGCTATAACCGCCGATCCAGAAACCGCTTGGGC 1009
||||||||||| || | |||||||||||||||||||||||||||| ||||||||||||
Sbjct 972 CAAAACAAGAGCAGCAATAGCGATTGAAGCTATAACCGCCGATCCAGCAACCGCTTGGGC 1031
Query 1010 TATCTCAGCTTACGGCGGCGTAACCGTGTTAATCGAAGCTTGTAGATCAGGATCTAAAGA 1069
||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||| |
Sbjct 1032 TATCTCAGCTTACGGAGGCGTAACCGTATTAATCGAAGCTTGTAGATCAGGATCTAAACA 1091
Query 1070 AGTACAAGAACACATCGCTGGTGCTATAAGCAATATCTCCGCCGTGGAAGAAATCAGAAC 1129
||||||||||||||||||||||||||||||||| ||| ||||||| ||||||||||||||
Sbjct 1092 AGTACAAGAACACATCGCTGGTGCTATAAGCAACATCGCCGCCGTTGAAGAAATCAGAAC 1151
Query 1130 AACACTAGCTGAAGAAGGAGCTATACCGGTTCTTCTCCCTCTCTTAATCTCCGGTTCATC 1189
|||| ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||
Sbjct 1152 AACATTAGCTGAAGAAGGAGCTATACCGGTTCTTATCCAACTCTTAATCTCCGGTTCATC 1211
Query 1190 GTCGGTTA-AAGA-AAAGACGGCGAATTTCATCTCCTTAATCTCATCTTCCGGTGAGTAT 1247
|||| || |||| ||| || ||||||||||||||||| |||||||||||||||||||||
Sbjct 1212 ATCGG-TACAAGAGAAA-ACCGCGAATTTCATCTCCTTGATCTCATCTTCCGGTGAGTAT 1269
Query 1248 TTCAGAGATTTGATTGTTAGAG-AA-A-GAGGATTACAGATTCTGATTCATTTAGTTCAA 1304
| |||||||||||||||||||| || | ||||||||||||||||||||||||||||||||
Sbjct 1270 TACAGAGATTTGATTGTTAGAGAAAGAGGAGGATTACAGATTCTGATTCATTTAGTTCAA 1329
Query 1305 GAATCATCAAATCCCGATACAATCGAACACTCTTTGCTTGCTCTCACTCAAATCTCCGCC 1364
|||||||||||||||||||| |||||||||| ||||||||||||| |||| ||||| |||
Sbjct 1330 GAATCATCAAATCCCGATACGATCGAACACTGTTTGCTTGCTCTCTCTCAGATCTCTGCC 1389
Query 1365 ATGGAAACAATTTCTAGGGTTTTATCATCATCAACAACATTCATAATCCGATTAGGTGAA 1424
||||||||| |||||||||||||||| |||||||||| |||||||||||||||||||||
Sbjct 1390 ATGGAAACAGTTTCTAGGGTTTTATCTTCATCAACAAGGTTCATAATCCGATTAGGTGAA 1449
Query 1425 TTAATCAAGCACGGAAACGTGATCCTTCAACAGATCTCATCTTCTCTTTTATCGAATTTA 1484
|| || || ||||||||||| |||||||||||||||||| ||||||||||||||||||||
Sbjct 1450 TTGATAAAACACGGAAACGTAATCCTTCAACAGATCTCAACTTCTCTTTTATCGAATTTA 1509
Query 1485 ACAATCAGCGACGGAAACAAACGAGCCGTCGCTGATTGTTTAAGCTCGTTGATTCGGTTA 1544
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1510 ACAATCAGCGACGGTAACAAACGAGCCGTCGCTGATTGTTTAAGCTCGTTGATTCGGTTA 1569
Query 1545 ATGGAATCGCCGAAACCGGCGGGGTTACAAGAAGCGGCAACGGAGGCGGCTAAGTCGTTG 1604
|||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||
Sbjct 1570 ATGGAATCGCCGAAACCGGCGGGGTTACAAGAAGCGGCGACGGAGGCGGCGAAGTCGTTG 1629
Query 1605 TTGACGGTTAGATCAAATCGGAAAGAGTTGATGAGAGACGAGAAGAGTGTGATTCGATTG 1664
||||| ||||||||||||||||| |||||||||||||| |||||||||||||||||||||
Sbjct 1630 TTGACCGTTAGATCAAATCGGAAGGAGTTGATGAGAGATGAGAAGAGTGTGATTCGATTG 1689
Query 1665 GTGCAAATGTTAGATCCGAGGAATGAGAGGATGGCGAATAAAGAGCTTCCGGTGATGATT 1724
||||||||||| ||||||||||||||||||||| ||||||||||||||||||||| ||
Sbjct 1690 GTGCAAATGTTGGATCCGAGGAATGAGAGGATGAATAATAAAGAGCTTCCGGTGATGGTT 1749
Query 1725 GTGACGGCGATTTTATCCGGTGGAAGTTACGCGGCGAGGACGAAGTTGATTGGTTTAGGA 1784
||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1750 GTGACGGCGATTTTATCAGGTGGAAGTTATGCGGCGAGGACGAAGTTGATTGGTTTAGGA 1809
Query 1785 GCTGATCGTTACCTACAATCTCTGGAGGAAATGGAAGTTTCCGGTGCTAAGAAAGCGGTT 1844
||||||||||| || |||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1810 GCTGATCGTTATCTTCAATCTCTGGAGGAAATGGAAGTTCCCGGTGCTAAGAAAGCGGTT 1869
Query 1845 CAGAGACTCGCCGCCGGTAATCGGTTAAAGAGTATCTTCA-C-C-AGAGCTTGGAAAGAT 1901
||||||||||||||||||||||||||||||||||||||| | | ||| | |||||||||
Sbjct 1870 CAGAGACTCGCCGCCGGTAATCGGTTAAAGAGTATCTTCTTCACTAGACCATGGAAAGAT 1929
Query 1902 CACTGATAAAGGTGTGAAGGATTAAATTTGTGGAAGGCGAAGAATCCGATTACTCATACT 1961
|||| | |||||| |||||| || ||||||||||||| ||| | ||||||| ||||||||
Sbjct 1930 CACT-A-AAAGGTATGAAGGTTTCAATTTGTGGAAGGAGAATATTCCGATTTCTCATACT 1987
Query 1962 CTATATACAACACATTCACATCTACAAACAATTGtttttgtttt-ttt-ct-----aaat 2014
||| |||||||||||||||||| |||| ||||||||||| |||| ||| || ||||
Sbjct 1988 CTAAATACAACACATTCACATCAACAACCAATTGTTTTTTTTTTCTTTTCTTTTCTAAAT 2047
Query 2015 atgaaaatcctaatattttttttttaa-tattttttttttttAATGGATGCAGGTTTTAT 2073
|||||||||||||||||| |||||||| |||| | | | ||||||||||||||||
Sbjct 2048 ATGAAAATCCTAATATTTATTTTTTAACTATTATCAAAAGTCA-TGGATGCAGGTTTTAT 2106
Query 2074 AGTATCCTTCTTCTGTTTT-TATTATTTATTTATAAAGTGGAGAGttttttttttttttt 2132
||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||
Sbjct 2107 AGTATCCTTCTTCTGTTTTGT-TTATTTATTTATAAAGTGGAGAGTTTTTTTTTTTTTTT 2165
Query 2133 CCACATGTATTATTTGTGTGATTATATATATGTAAATGACTCTTGAGTTTTGATCTGTGG 2192
||||||||| | |||||||||||||| ||||||||||||||||||||||||||| |
Sbjct 2166 T-ACATGTATT-T--GTGTGATTATATAT--GTAAATGACTCTTGAGTTTTGATCTGTAG 2219
Query 2193 GAGTACTAAATATTGTAACTGT 2214
||||||| ||||||||||||||
Sbjct 2220 GAGTACTTAATATTGTAACTGT 2241
> AT2G05812.1 | Symbols: | Potential natural antisense gene, locus
overlaps with AT2G05810 | chr2:2215236-2217150 FORWARD
LENGTH=1915
Length=1915
Score = 2891 bits (1565), Expect = 0.0
Identities = 1791/1899 (94%), Gaps = 20/1899 (1%)
Strand=Plus/Minus
Query 1 ACAAATTATGGCATCAAGAGAAATAGATTTGTCATCAAAGTACACATCACC-AAAAGT-A 58
||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||| |
Sbjct 1911 ACAAACTATGGCATCAAGAGAAATAGATTTGTCATCAAAGTACACATCACCTAAAAGTAA 1852
Query 59 AAATTGACAAAACAGAGCTTGTCCTCACGCCTCTCTC-TTTTCCCGGCAACAA-T--TAA 114
|||| ||||||| ||| |||||||||||||||||||| ||||||||||||||| | ||
Sbjct 1851 AAATAGACAAAAGAGACCTTGTCCTCACGCCTCTCTCTTTTTCCCGGCAACAACTAACAA 1792
Query 115 CAACA---CTTTACCTTTCTCTCTAAGGCAAAACCCTTCTCTTATGTGACCACTCCTCCA 171
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1791 CAACACTTCTTTACCTTTCTCTCTAAGGCAAAACCCTTCTCTTATGTGACCACTCCTCCA 1732
Query 172 TGCATCACTCCTCCGCCGCCGTCTCCGGCGAACTCACAAAACCACCAACAGCTCCACTCC 231
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1731 TGCATCCCTCCTCCGCCGCCGTCTCCGGCGAACTCACAAAACCACCAACAGCTCCACTCC 1672
Query 232 AACCACTTCTTGACTTAATCACAAACGtcctctccctcctcctcctctcttccctcACCG 291
|||||||| ||||| |||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1671 AACCACTTGTTGACCTAATAACAAACGTCCTCTCCCTCCTCCTCCTCTCTTCCCTCACCG 1612
Query 292 TCCGTTCCTTCATCGGCCGTTGGCAAATCCTCCGATCCAAACTCTTCTCACTAAACTCAT 351
|||||||||||||||| || ||||||||||||||||||||||||||| ||||||||||||
Sbjct 1611 TCCGTTCCTTCATCGGACGGTGGCAAATCCTCCGATCCAAACTCTTCACACTAAACTCAT 1552
Query 352 CTCTCTCTTCCTTATCCGAATCACCTCACTGGTCACAAAAtcctctcctccacactctcc 411
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1551 CTCTCTCTTCCTTATCCGAATCACCTCACTGGTCACAAAATCCTCTCCTCCACACTCTCC 1492
Query 412 ttccttctctcctctcaaatctccaacgcctcacttcactctccGACCAATGCTCCTCCG 471
| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1491 TCCCTTCTCTCCTCTCAAATCTCCAACGCCTCTCTTCACTCTCCGACCAATGCTCCTCCG 1432
Query 472 CTTCATTCTCCGGTGGTAAACTTCTCATGCAAAGCGACCTCGATATCGCTTCCTCTTCAC 531
||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| |
Sbjct 1431 CTTCATTCTCCGGTGGTAAACTTCTCATGCAAAGCGACCTCGACATAGCTTCCTCTTCCC 1372
Query 532 TCTCCACTCACATAAGCGACCTTGACCTCCTCCTCAGATCTGGTGTCCTCCACCAACAAA 591
|||| ||||||||||| ||||||||||||||||||||||| |||||||||||||||||||
Sbjct 1371 TCTCTACTCACATAAGTGACCTTGACCTCCTCCTCAGATCCGGTGTCCTCCACCAACAAA 1312
Query 592 ACGCTATCGTTTTATCACTCCCACCTCCAACTTCAGATAAAGATGACATTGCTTTCTTCA 651
|||| |||||||||||||||||||| ||||| |||||||||||||||||||| |||||||
Sbjct 1311 ACGCCATCGTTTTATCACTCCCACCACCAACATCAGATAAAGATGACATTGCCTTCTTCA 1252
Query 652 TCAGAGATCTCTTCACTCGTCTCCAAATCGGTGGAGCTGAATTCAAGAAA-AAATCTTTA 710
||||||| |||||||||||||||||||||||||||||||| ||||| ||| |||||| ||
Sbjct 1251 TCAGAGACCTCTTCACTCGTCTCCAAATCGGTGGAGCTGAGTTCAA-AAAGAAATCTCTA 1193
Query 711 GAATCTCTTCTTCAACTTCTCACCGATAACGAAAAATCCGCAAGAATCATAGCTAAAGAA 770
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1192 GAATCTCTTCTTCAACTTCTCACCGATAACGAAAAATCCGCAAGAATCATAGCTAAAGAA 1133
Query 771 GGTAATGTTAGTTACTTAGTCACTCTTCTTGATCTCCATCACCATCCTCTGATCCGTGAG 830
||||||||| |||||||||| ||||||||||||||||||||||||||||| |||||||||
Sbjct 1132 GGTAATGTTGGTTACTTAGTAACTCTTCTTGATCTCCATCACCATCCTCTAATCCGTGAG 1073
Query 831 CATGCACTCGCCGCCGTCTC-CTTATTAACTTCATCAAGCGTCGATTCGAGAAAGACGGT 889
|| ||||||||||||||||| | | ||||||||||| |||| ||| ||||||||||||||
Sbjct 1072 CACGCACTCGCCGCCGTCTCGC-TGTTAACTTCATCGAGCGCCGACTCGAGAAAGACGGT 1014
Query 890 GTTCGAACAAGGCGGATTAGGTCCATTACTACGATTACTCGAAACCGGATCTCCACCGTT 949
|||||||||||||||||||||||||||||||||||| || |||||||||||| |||||||
Sbjct 1013 GTTCGAACAAGGCGGATTAGGTCCATTACTACGATTGCTAGAAACCGGATCTTCACCGTT 954
Query 950 GAAAACAAGAGCTGCGGTGGCGATTGAAGCTATAACCGCCGATCCAGAAACCGCTTGGGC 1009
||||||||||| || | |||||||||||||||||||||||||||| ||||||||||||
Sbjct 953 CAAAACAAGAGCAGCAATAGCGATTGAAGCTATAACCGCCGATCCAGCAACCGCTTGGGC 894
Query 1010 TATCTCAGCTTACGGCGGCGTAACCGTGTTAATCGAAGCTTGTAGATCAGGATCTAAAGA 1069
||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||| |
Sbjct 893 TATCTCAGCTTACGGAGGCGTAACCGTATTAATCGAAGCTTGTAGATCAGGATCTAAACA 834
Query 1070 AGTACAAGAACACATCGCTGGTGCTATAAGCAATATCTCCGCCGTGGAAGAAATCAGAAC 1129
||||||||||||||||||||||||||||||||| ||| ||||||| ||||||||||||||
Sbjct 833 AGTACAAGAACACATCGCTGGTGCTATAAGCAACATCGCCGCCGTTGAAGAAATCAGAAC 774
Query 1130 AACACTAGCTGAAGAAGGAGCTATACCGGTTCTTCTCCCTCTCTTAATCTCCGGTTCATC 1189
|||| ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||
Sbjct 773 AACATTAGCTGAAGAAGGAGCTATACCGGTTCTTATCCAACTCTTAATCTCCGGTTCATC 714
Query 1190 GTCGGTTA-AAGA-AAAGACGGCGAATTTCATCTCCTTAATCTCATCTTCCGGTGAGTAT 1247
|||| || |||| ||| || ||||||||||||||||| |||||||||||||||||||||
Sbjct 713 ATCGG-TACAAGAGAAA-ACCGCGAATTTCATCTCCTTGATCTCATCTTCCGGTGAGTAT 656
Query 1248 TTCAGAGATTTGATTGTTAGAG-AA-A-GAGGATTACAGATTCTGATTCATTTAGTTCAA 1304
| |||||||||||||||||||| || | ||||||||||||||||||||||||||||||||
Sbjct 655 TACAGAGATTTGATTGTTAGAGAAAGAGGAGGATTACAGATTCTGATTCATTTAGTTCAA 596
Query 1305 GAATCATCAAATCCCGATACAATCGAACACTCTTTGCTTGCTCTCACTCAAATCTCCGCC 1364
|||||||||||||||||||| |||||||||| ||||||||||||| |||| ||||| |||
Sbjct 595 GAATCATCAAATCCCGATACGATCGAACACTGTTTGCTTGCTCTCTCTCAGATCTCTGCC 536
Query 1365 ATGGAAACAATTTCTAGGGTTTTATCATCATCAACAACATTCATAATCCGATTAGGTGAA 1424
||||||||| |||||||||||||||| |||||||||| |||||||||||||||||||||
Sbjct 535 ATGGAAACAGTTTCTAGGGTTTTATCTTCATCAACAAGGTTCATAATCCGATTAGGTGAA 476
Query 1425 TTAATCAAGCACGGAAACGTGATCCTTCAACAGATCTCATCTTCTCTTTTATCGAATTTA 1484
|| || || ||||||||||| |||||||||||||||||| ||||||||||||||||||||
Sbjct 475 TTGATAAAACACGGAAACGTAATCCTTCAACAGATCTCAACTTCTCTTTTATCGAATTTA 416
Query 1485 ACAATCAGCGACGGAAACAAACGAGCCGTCGCTGATTGTTTAAGCTCGTTGATTCGGTTA 1544
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 415 ACAATCAGCGACGGTAACAAACGAGCCGTCGCTGATTGTTTAAGCTCGTTGATTCGGTTA 356
Query 1545 ATGGAATCGCCGAAACCGGCGGGGTTACAAGAAGCGGCAACGGAGGCGGCTAAGTCGTTG 1604
|||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||
Sbjct 355 ATGGAATCGCCGAAACCGGCGGGGTTACAAGAAGCGGCGACGGAGGCGGCGAAGTCGTTG 296
Query 1605 TTGACGGTTAGATCAAATCGGAAAGAGTTGATGAGAGACGAGAAGAGTGTGATTCGATTG 1664
||||| ||||||||||||||||| |||||||||||||| |||||||||||||||||||||
Sbjct 295 TTGACCGTTAGATCAAATCGGAAGGAGTTGATGAGAGATGAGAAGAGTGTGATTCGATTG 236
Query 1665 GTGCAAATGTTAGATCCGAGGAATGAGAGGATGGCGAATAAAGAGCTTCCGGTGATGATT 1724
||||||||||| ||||||||||||||||||||| ||||||||||||||||||||| ||
Sbjct 235 GTGCAAATGTTGGATCCGAGGAATGAGAGGATGAATAATAAAGAGCTTCCGGTGATGGTT 176
Query 1725 GTGACGGCGATTTTATCCGGTGGAAGTTACGCGGCGAGGACGAAGTTGATTGGTTTAGGA 1784
||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||
Sbjct 175 GTGACGGCGATTTTATCAGGTGGAAGTTATGCGGCGAGGACGAAGTTGATTGGTTTAGGA 116
Query 1785 GCTGATCGTTACCTACAATCTCTGGAGGAAATGGAAGTTTCCGGTGCTAAGAAAGCGGTT 1844
||||||||||| || |||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 115 GCTGATCGTTATCTTCAATCTCTGGAGGAAATGGAAGTTCCCGGTGCTAAGAAAGCGGTT 56
Query 1845 CAGAGACTCGCCGCCGGTAATCGGTTAAAGAGTATCTTC 1883
|||||||||||||||||||||||||||||||||||||||
Sbjct 55 CAGAGACTCGCCGCCGGTAATCGGTTAAAGAGTATCTTC 17
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 109838792460
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5