BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg480218 Length=847 Score E Sequences producing significant alignments: (Bits) Value AT2G06200.1 | Symbols: AtGRF6, GRF6 | growth-regulating factor ... 1253 0.0 > AT2G06200.1 | Symbols: AtGRF6, GRF6 | growth-regulating factor 6 | chr2:2426271-2427323 FORWARD LENGTH=872 Length=872 Score = 1253 bits (678), Expect = 0.0 Identities = 802/857 (94%), Gaps = 27/857 (3%) Strand=Plus/Plus Query 1 AATCCCAAtctttaatctttaatctttcttcttcttctctctctctcttcctctcttcAT 60 ||||||||||||||||| | |||||||||||| ||||||| |||||| |||||||||| Sbjct 15 AATCCCAATCTTTAATC--T-CTCTTTCTTCTTCATCTCTCTTTCTCTTTCTCTCTTCAT 71 Query 61 GGCTACTAGGATTCCATTCACAGAATCACAATGGGAAGAGCTTGAAAACCAAGCTCTTGT 120 |||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 72 GGCTACAAGGATTCCATTCACAGAATCACAATGGGAAGAACTTGAAAACCAAGCTCTTGT 131 Query 121 GTTCAAGTACTTAGCCT-CAAATGTTCCAGTTCCACCTCAtcttctcttcctcatcaaaa 179 |||||||||||||| || ||||| | || ||||||||||||||||||||||||||||||| Sbjct 132 GTTCAAGTACTTAG-CTGCAAATATGCCTGTTCCACCTCATCTTCTCTTCCTCATCAAAA 190 Query 180 gaccctttctcttctcttcttcttcttc--c-tcttcctcttcaagcttcttctctccca 236 |||||||||||||||||||||||||||| | ||||| |||||||||||||||||||||| Sbjct 191 GACCCTTTCTCTTCTCTTCTTCTTCTTCTTCATCTTCTTCTTCAAGCTTCTTCTCTCCCA 250 Query 237 ctctttctccACACTTTGGGTGGAATGTGTATGAGATGGGAATGGGAAGAAAGATAGATG 296 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 251 CTCTTTCTCCACACTTTGGGTGGAATGTGTATGAGATGGGAATGGGAAGAAAGATAGATG 310 Query 297 CAGAGCCAGGAAGATGTAGAAGAACTGATGGCAAGAAATGGAGATGCTCCAAAGAAGCTT 356 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 311 CAGAGCCAGGAAGATGTAGAAGAACTGATGGCAAGAAATGGAGATGCTCTAAAGAAGCTT 370 Query 357 ATCCTGACTCTAAGTACTGTGAGAGGCATATGCATAGAGGCAAGAACCGTTCTTCCTCAA 416 | ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 371 ACCCTGACTCTAAGTACTGTGAGAGACATATGCATAGAGGCAAGAACCGTTCTTCCTCAA 430 Query 417 GAAAGCCTCCTCCTACTCAATTCACACCAAATCTCTTTCTCGACTCTTCTCTATCAAGAA 476 ||||||||||||||||||||||||| |||||||||||||||||||||||| | || ||| Sbjct 431 GAAAGCCTCCTCCTACTCAATTCACTCCAAATCTCTTTCTCGACTCTTCT-TC-CA-GAA 487 Query 477 GAAGAAGAAGTGGATACATGGATGATTTCTTCTCCATAGAACCTTCCGGGTCAATCAAAA 536 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 488 GAAGAAGAAGTGGATACATGGATGATTTCTTCTCCATAGAACCTTCCGGGTCAATCAAAA 547 Query 537 GCTGCTCTGGCTCAGCAATGGAAGATAATGATGATGGCTCATGTAGGGGCATCAACAAAT 596 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 548 GCTGCTCTGGCTCAGCAATGGAAGATAATGATGATGGCTCATGTAGAGGCATCAACAA-- 605 Query 597 TTTCTAACGAGGAGAAGCAGCCGGATCGACATTGCTTCATCCTTGGAACTGACTTGGGGA 656 | |||||||||||||||||||||||||||||||||||||| ||||||||| ||| Sbjct 606 ---C----GAGGAGAAGCAGCCGGATCGACATTGCTTCATCCTTGGTACTGACTTGAGGA 658 Query 657 CTTGTGAGAGGCCATTGATGCTT-GAGGAGAAGCTGAAACAAAGAGATGATGAT---GAA 712 | ||||||||||||||||| || |||||||||||||||||||||||| ||||| ||| Sbjct 659 CACGTGAGAGGCCATTGATG-TTAGAGGAGAAGCTGAAACAAAGAGATCATGATAATGAA 717 Query 713 CAAGAGCAAGGTAGCAAGAGGTTTTATAGGTTTCTTGATGAATGGCCTTCTTCTAAGTCT 772 |||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 718 GAAGAGCAAGGAAGCAAGAGGTTTTATAGGTTTCTTGATGAATGGCCTTCTTCTAAATCT 777 Query 773 TCTGTTTCTACTTCACTCTTTATTTGATCATCTTTTGTTCTTA-A-CCTTCTGTTTCTTG 830 |||||||||||||||||||| |||||||||||||||||||||| | |||| | ||||||| Sbjct 778 TCTGTTTCTACTTCACTCTTCATTTGATCATCTTTTGTTCTTATAACCTTGTATTTCTTG 837 Query 831 TTAAGTTGGTAATGCAA 847 ||||| ||||||||||| Sbjct 838 TTAAGATGGTAATGCAA 854 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 41292468834 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5