BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg480229 Length=2170 Score E Sequences producing significant alignments: (Bits) Value AT2G07040.1 | Symbols: ATPRK2A, PRK2A | Leucine-rich repeat pro... 3073 0.0 > AT2G07040.1 | Symbols: ATPRK2A, PRK2A | Leucine-rich repeat protein kinase family protein | chr2:2916538-2918942 FORWARD LENGTH=2209 Length=2209 Score = 3073 bits (1664), Expect = 0.0 Identities = 2024/2195 (92%), Gaps = 36/2195 (2%) Strand=Plus/Plus Query 1 TCATCTCCAGAGACTCTCCTTGCATCTTCCTTTAGAGGGCGCGCCTCCCGTGCGCCTTCT 60 ||||||||||||||||||||| ||||| || |||||||||||||||||||||||||||| Sbjct 15 TCATCTCCAGAGACTCTCCTTCCATCTACCCTTAGAGGGCGCGCCTCCCGTGCGCCTTC- 73 Query 61 TTAACTGGTTATGGAATCCACATGTTTCCTCTTCTTTTCCATTGTATCTATCTTCTTCGT 120 |||||||||||||||||||| |||| || | ||| |||||||||||||| |||||||| | Sbjct 74 TTAACTGGTTATGGAATCCAAATGTCTCATGTTCGTTTCCATTGTATCTGTCTTCTTCAT 133 Query 121 GGCTGCTCATGGCTTATCAGAGACCGAATCTCTCTTGAAATTCAAGAATTCTCTTGTTAT 180 || || | ||||| |||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 134 GGTTGTTAATGGCGTATCAGAGACCGAAACTCTCTTGAAATTCAAGAATTCTCTTGTTAT 193 Query 181 TGGGAGAGCAAATGCTTTGGAGAGCTGGAATAGAAGTAATCCTCCATGCAAATGGACTGG 240 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 194 TGGGAGAGCAAATGCTTTGGAGAGCTGGAATAGAAGGAATCCTCCATGCAAATGGACTGG 253 Query 241 TGTCTTGTGTGATAGAGGCTTTGTTTGGGGATTACGACTAGAGACTTTTGAGATCTCCGG 300 |||||||||||||||||||||||||||||| ||||||||||||| | ||||| |||| || Sbjct 254 TGTCTTGTGTGATAGAGGCTTTGTTTGGGGGTTACGACTAGAGAATCTTGAGCTCTCTGG 313 Query 301 CTCTATAGACATCGAGGCGTTGATGGATTTGAAGTCTCTAAGGTCTCTTAGCTTCATAAA 360 |||||| ||||||||||||||||||| |||||| ||||||||||||||||| |||||||| Sbjct 314 CTCTATCGACATCGAGGCGTTGATGGGTTTGAATTCTCTAAGGTCTCTTAGTTTCATAAA 373 Query 361 CAACAAACTTAGAGGTCCATTTCCAGAGTTCAAAAAACTTGTTGCTTTGAAATCACTTTA 420 ||||||| ||| ||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 374 CAACAAATTTAAAGGTCCATTTCCAGAGTTCAAGAAACTTGTTGCTTTGAAATCACTTTA 433 Query 421 CTTGTCAAACAATCAATTCGACGTAAAGATACCTAAGGATGCATTTGATGGGATGGGGTG 480 |||||||||||||||||||||| || ||||||||||||||||||||||||| |||||||| Sbjct 434 CTTGTCAAACAATCAATTCGACCTAGAGATACCTAAGGATGCATTTGATGGCATGGGGTG 493 Query 481 GTTGAAAAAACTCCATCTGGAG-AACAATAAGTTTAGTGGTGAAATTCCAACGTCTTTGG 539 |||||||||||| ||||||||| || ||||| |||| |||||||||||||||||| |||| Sbjct 494 GTTGAAAAAACTTCATCTGGAGCAA-AATAATTTTATTGGTGAAATTCCAACGTCCTTGG 552 Query 540 TCAAAAGTCCTAAGCTTTTAGAGCTTAGACTTGACGGGAACCGGTTCACTGGACAAATAC 599 |||||||||| |||||| ||||||||||||||||||||||||||||||| |||||||||| Sbjct 553 TCAAAAGTCCAAAGCTTATAGAGCTTAGACTTGACGGGAACCGGTTCACCGGACAAATAC 612 Query 600 CGGAATTCACACATCAACCACACATGTTAAACCTTTCAAACAATGCATTGGCAGGTCAAA 659 | ||||||| |||||| ||| ||||||||||||||||||||||||||||||||||||||| Sbjct 613 CAGAATTCAGACATCATCCAAACATGTTAAACCTTTCAAACAATGCATTGGCAGGTCAAA 672 Query 660 TCCCAAATA-TTCTCAGTACAATGGATTCAAAATTGTTTGAAGGAAACAAAGGCTTATGT 718 ||||||||| || |||||||||||||| |||||||||||||||| || |||||||||||| Sbjct 673 TCCCAAATAGTT-TCAGTACAATGGATCCAAAATTGTTTGAAGGGAATAAAGGCTTATGT 731 Query 719 GGGAAACCTTTGGATACAAAGTGTACTTCTTCTTACAATCTTTCCCCAGAGCCTAAGTCA 778 || ||||||||||||||||||||| ||||| ||||||| | |||| | || || ||||| Sbjct 732 GGAAAACCTTTGGATACAAAGTGTTCTTCTCCTTACAACCATTCCTCGGAACCCAAGTCG 791 Query 779 AGCCCCAAGAAAAAATCATTTAAGTTTTTGTACATTGTAGCTGTAGC-GATAGTAGCACT 837 ||| ||||||||| ||||| |||||||||||||||||||||| ||| | ||| |||||| Sbjct 792 AGCACCAAGAAAACATCATCAAAGTTTTTGTACATTGTAGCTGCAGCAG-TAGCAGCACT 850 Query 838 GGCTGCATTACTCGTAATTATTGGATTGATCATCTTCCTT-TACCGGAGACGAACTAAGA 896 ||||||| |||| ||||||||||| || ||||||||||| | ||| ||||||| |||| Sbjct 851 AGCTGCATCACTCATAATTATTGGAGTGGTCATCTTCCTTAT-CCGAAGACGAAAGAAGA 909 Query 897 AACAACCACTATTGTCAGCAGAACCTGGACCATCAAGTCTACAAATGAGAGCTGGAATCC 956 |||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 910 AACAACCATTATTGTCAGCAGAACCAGGACCATCAAGTCTACAAATGAGAGCTGGAATCC 969 Query 957 AAGAAAGTGAAAGGGGACAAAGTAGCTACCATTCACAAAACCGCGCTGCAAAAAAGATGA 1016 |||||||||||||||||||| |||||||||||||||||||||| ||||| |||||||||| Sbjct 970 AAGAAAGTGAAAGGGGACAAGGTAGCTACCATTCACAAAACCGTGCTGCTAAAAAGATGA 1029 Query 1017 TTCATACCACAAAATTGTCATTTTTGAGGGATGACAAGGGAAAATTTGAGTTGCAAGATT 1076 |||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| Sbjct 1030 TTCATACCACAAAATTGTCATTTTTGAGAGATGACAAGGGGAAATTTGAGTTGCAAGATT 1089 Query 1077 TATTGAAAGCATCGGCAGAGATTCTAGGAAGTGGATGTTTCGGAGCATCGTATAAGACAC 1136 ||||||||||||| |||||||||||||||||||||||||| ||||| |||||||||||| Sbjct 1090 TATTGAAAGCATCAGCAGAGATTCTAGGAAGTGGATGTTTTGGAGCTTCGTATAAGACAT 1149 Query 1137 TGCTTTCGAACGGATCAGTGATGGTAGTGAAGAGGTTTAAACATATGAATAAG-GCAGGA 1195 |||||||||||||||| |||||||||||||||||||||||||||||||||| | |||||| Sbjct 1150 TGCTTTCGAACGGATCGGTGATGGTAGTGAAGAGGTTTAAACATATGAATA-GTGCAGGA 1208 Query 1196 ATTGAAGAGTTCCAAGAACACATGAAGAGGTTGGGGAGGTTAAACCATGAGAATTTGCTC 1255 ||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 1209 ATTGATGAGTTCCAAGAACACATGAAAAGGTTGGGGAGGTTAAACCATGAGAATTTGCTC 1268 Query 1256 CCCATTGTGGCTTATTACTATAAAAAAGAGGAAAAGCTTTTTGTTTCCGATTTTGTTGCG 1315 || ||||| ||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 1269 CCAATTGTTGCTTATTACTACAAAAAAGAGGAAAAGCTTTTTGTTTCCGATTTTGTTGCA 1328 Query 1316 AATGGAAGCTTGGCTGCTCATCTACATGGTCATAAATCTTTAGGGCAACCAAGCTTGGAT 1375 ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| Sbjct 1329 AATGGAAGCTTGGCTGCTCATCTCCATGGTCATAAATCCCTAGGGCAACCAAGCTTGGAT 1388 Query 1376 TGGCCAACAAGATTGAATATTGTGAAAGGTGTAGGAAGGGGACTTTTATACCTCAACAAA 1435 |||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 1389 TGGCCAACAAGATTCAATATTGTGAAAGGTGTAGGAAGGGGACTTTTATACCTCCACAAA 1448 Query 1436 AACCTACCTAGCCTAATGGCTCCTCATGGTCATCTAAAATCATCTAATGTTCTTCTCAGT 1495 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 1449 AACCTACCTAGCCTAATGGCTCCTCATGGTCATCTAAAATCATCTAATGTTCTTCTAAGT 1508 Query 1496 GAGAAATTTGAGCCTCTTCTTATGGACTATGGCTTGATCCCAATGATCAACGAAGAGAGC 1555 |||||||||||||||||||||||||||||||| || |||||||||||||||||||| ||| Sbjct 1509 GAGAAATTTGAGCCTCTTCTTATGGACTATGGTTTAATCCCAATGATCAACGAAGAAAGC 1568 Query 1556 GCGCAAGAGCTCATGGTGGCTTACAAATCCCCAGAGTACTTAAAACAAAACCGTGTGACC 1615 ||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| Sbjct 1569 GCGCAAGAGCTCATGGTGGCTTACAAATCCCCAGAGTACGTAAAACAAAGCCGTGTGACC 1628 Query 1616 AAGAAAACCGATGTTTGGGGGCTCGGGGTACTAATCTTGGAGATTCTTACAGGAAAGTTA 1675 ||||||||||||||||||||||| || ||||| ||||||||||||||||| ||||||||| Sbjct 1629 AAGAAAACCGATGTTTGGGGGCTAGGTGTACTCATCTTGGAGATTCTTACGGGAAAGTTA 1688 Query 1676 CCTGAAAGTTTCCCGCAAATCGATAAAGAAAGCGAGGAGGACCTAGCCAGCTGGGTGAGG 1735 | |||||||||| | ||| | |||||||||||||||||||||||||| |||||||| ||| Sbjct 1689 CTTGAAAGTTTCTCACAAGTGGATAAAGAAAGCGAGGAGGACCTAGCGAGCTGGGTAAGG 1748 Query 1736 TCGATGTTT-AAAGGAGAGTGGACACAGGAATTGTTTGATCAAGAAATGGGGACAACAAG 1794 || | |||| ||||||||||||||||| ||||||||||||||||||||||||| |||||| Sbjct 1749 TCTA-GTTTTAAAGGAGAGTGGACACAAGAATTGTTTGATCAAGAAATGGGGAAAACAAG 1807 Query 1795 CAATTGTGAAGCACATATACTCAAACTCTTGAAAATTGGACTGAGTTGTTGTGAAGTAGA 1854 |||||||||||||||||||||||| ||| ||| ||||||| ||||||||||||||||||| Sbjct 1808 CAATTGTGAAGCACATATACTCAATCTCATGAGAATTGGATTGAGTTGTTGTGAAGTAGA 1867 Query 1855 TGTGGAGAAAAGGTTagatataagagaggctgttgagaagatagaagatatgatgaagga 1914 |||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||| Sbjct 1868 TGTGGAGAAAAGGTTAGATATAAGAGAGGCTGTTGAGAAGATGGAAGATTTGATGAAGGA 1927 Query 1915 gagagaacaaggagatgatGACTTCTACTCAACATATGCGAGTGAAGCTGATGGGAGATC 1974 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 1928 GAGAGAACAAGGAGATGATGACTTTTACTCAACATATGCGAGTGAAGCTGATGGGAGATC 1987 Query 1975 ATCGAGGGGAGTGTCAAGTGAGGGAATTAACTTGTCATGAAAA-T-----GA---G--AT 2023 ||||||||| | |||||||||||||||||||||||||||||| | || | || Sbjct 1988 GTCGAGGGGACTATCAAGTGAGGGAATTAACTTGTCATGAAAAGTAAATCGACAAGCTAT 2047 Query 2024 CGAC-AA--TTTTCATGCAAGAGTTGTGTCTTAAAACCACAACTTGGTTGGA-CATAATT 2079 | | || ||||||||||| |||||| ||||||||| ||||||| ||||| | ||||| Sbjct 2048 CAAGTAAACTTTTCATGCAAAAGTTGT--CTTAAAACCGCAACTTGCTTGGAGC-TAATT 2104 Query 2080 GATGTCGACACCTCAATATACGGGATCCC--TT-A-ACGTAGAAAAAAGTTGGTTTTGAG 2135 ||||||||||| ||||||||||| ||||| || | | ||||||||| |||||||||| | Sbjct 2105 GATGTCGACACTTCAATATACGGAATCCCCCTTTATAAGTAGAAAAA-GTTGGTTTTGCG 2163 Query 2136 TTGACGTGTGATGTTATTGTGGGAATTTTATCTGC 2170 || ||||||||| ||||| ||||||||| |||||| Sbjct 2164 TTAACGTGTGATATTATTTTGGGAATTTCATCTGC 2198 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 107629968480 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5