BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg480275 Length=453 Score E Sequences producing significant alignments: (Bits) Value AT2G07772.1 | Symbols: | unknown protein; Has 30201 Blast hits... 837 0.0 > AT2G07772.1 | Symbols: | unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr2:3300978-3301804 REVERSE LENGTH=540 Length=540 Score = 837 bits (453), Expect = 0.0 Identities = 453/453 (100%), Gaps = 0/453 (0%) Strand=Plus/Plus Query 1 TTAGGGGAAGGTGGATTAGGTCAGTTGGTTAGGGATGTGAGGAAAGGAAGGGAAGGTTGG 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 88 TTAGGGGAAGGTGGATTAGGTCAGTTGGTTAGGGATGTGAGGAAAGGAAGGGAAGGTTGG 147 Query 61 GCCAGGCAAGCTAGGGAAGTTGAGAAGGTTGGGCTAGGGAAGTTGGGAGTTGGTGTTTCC 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 148 GCCAGGCAAGCTAGGGAAGTTGAGAAGGTTGGGCTAGGGAAGTTGGGAGTTGGTGTTTCC 207 Query 121 CTTGTTCCCAAAAAAGACAAGGCTGAGTTGCCCCTTCTACCATCTGAGGTGGAATACGGA 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 208 CTTGTTCCCAAAAAAGACAAGGCTGAGTTGCCCCTTCTACCATCTGAGGTGGAATACGGA 267 Query 181 TCAAGATTTGCTGAGTATCTCTTGATCGAAGGGTTCAAGCCGCTAAAGCGGAAAGATATA 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 268 TCAAGATTTGCTGAGTATCTCTTGATCGAAGGGTTCAAGCCGCTAAAGCGGAAAGATATA 327 Query 241 TCTCTTCGCCTGAAGCGTTGTGGATTTAGGCGTGTCACGCCAACCTTCTGTAAGTTCCTG 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 328 TCTCTTCGCCTGAAGCGTTGTGGATTTAGGCGTGTCACGCCAACCTTCTGTAAGTTCCTG 387 Query 301 GATAATCGTTCCCGGATAATGCCTGCCGCAGGGACTAACCCTATCTTCGCGCATACTTCC 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 388 GATAATCGTTCCCGGATAATGCCTGCCGCAGGGACTAACCCTATCTTCGCGCATACTTCC 447 Query 361 TTGTTTGTCTGGGAGTTGAATCAGAAGCATCGAATGAAAGCTTCTTTACAGGACCTCTTC 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 448 TTGTTTGTCTGGGAGTTGAATCAGAAGCATCGAATGAAAGCTTCTTTACAGGACCTCTTC 507 Query 421 TATTTCCCTCCATTCTTCTTCCTAGTGACCTAG 453 ||||||||||||||||||||||||||||||||| Sbjct 508 TATTTCCCTCCATTCTTCTTCCTAGTGACCTAG 540 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 21564864321 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5