BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg480281 Length=1936 Score E Sequences producing significant alignments: (Bits) Value AT2G11520.1 | Symbols: CRCK3 | calmodulin-binding receptor-like... 2789 0.0 > AT2G11520.1 | Symbols: CRCK3 | calmodulin-binding receptor-like cytoplasmic kinase 3 | chr2:4618581-4621576 FORWARD LENGTH=1968 Length=1968 Score = 2789 bits (1510), Expect = 0.0 Identities = 1825/1972 (93%), Gaps = 41/1972 (2%) Strand=Plus/Plus Query 1 AAAGAAACAGAACACGAATTTTCAAAGTTTTCCACACGATGTCTTCCATGAGATCGTTAC 60 ||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 1 AAAAAAACAGAACACGAATTTTCAAAGTTTTCCACACGATGTCTTCCATAAGATCGTTAC 60 Query 61 CACGTCCCTAACTCTCCTCCTTCAGACAAAA-TAC-TT--TTAGTCTTCTTTC-TTTGGT 115 ||||||||||||||| ||||||||||||||| ||| || ||| ||||||||| |||| Sbjct 61 CACGTCCCTAACTCTTCTCCTTCAGACAAAAGTACTTTAGTTATTCTTCTTTCTTTTGCC 120 Query 116 ATACTTGTCTGAAAACAAAATAAATC-TTTGTTTTCGGTCAAACTGATTCATATACTGTA 174 |||||| |||||||||| |||||||| ||||| |||||||||||||||||| |||||||| Sbjct 121 ATACTTCTCTGAAAACAGAATAAATCTTTTGTATTCGGTCAAACTGATTCAAATACTGTA 180 Query 175 CAGTCAAGTCAAAGCTACAAGATCGTGTTCCAGGTTTAGAGAAAATCTTCTGAACTC-TA 233 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 181 CAGTCAAGTCAAAGCTACAAGATCGTGTTCCAGGTTTAGAGAAAATCTTCTGAACTCAAA 240 Query 234 AGATTCTCATAATTGAGTTTATAAATGGTTTATTGAAGTTGAGTATTTTGTTGATATAAA 293 |||||||||||| ||||||||||||||| | |||||||||| |||||||||||||| ||| Sbjct 241 AGATTCTCATAACTGAGTTTATAAATGGATAATTGAAGTTGTGTATTTTGTTGATA-AAA 299 Query 294 -CAAAATTATGGGTGGAGATGATTTCAGCTTCACAAGATTGGTG-TGTACTGCTTTGTTT 351 ||||| ||||||||||||||||| |||||||||||||||||| | ||||||||||||| Sbjct 300 CCAAAACCATGGGTGGAGATGATTTGAGCTTCACAAGATTGGTGAT-TACTGCTTTGTTT 358 Query 352 GGTCTGTTAATGTTATTGCAAATCAAGGAAACTTCTGCGTCAGCATCCTTTGTAAGCTCG 411 |||||||||||||| || |||||||||||||||||||| ||| ||||||||||||||||| Sbjct 359 GGTCTGTTAATGTTGTTACAAATCAAGGAAACTTCTGCATCAACATCCTTTGTAAGCTCG 418 Query 412 AGCGTTTGTCGGTCTGATCACTTGACCTACACAAAGCCTTATCAACAAGGGAGTTTGTTC 471 || |||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 419 AGTGTTTGTAAGTCTGATCACTTGACCTACACAAAGCCTTATCAACAAGGGAGTTTGTTC 478 Query 472 ACTATTAACGGGAATCCGGTGGAGAAAGTCCGGTTTTGCGAAGCCTTACGGTTTCACAAA 531 || |||||||| ||||||||||||||| |||||||||||||||| ||||||||||||||| Sbjct 479 ACAATTAACGGTAATCCGGTGGAGAAACTCCGGTTTTGCGAAGCTTTACGGTTTCACAAA 538 Query 532 GCCAATGGTTGTATCTTTGGGGATTCTTTCT-GTGATGACTTCTGCACAGTTCACTATCT 590 ||||||||||||||||||| ||||||||| | ||||||||||||||||| |||||| ||| Sbjct 539 GCCAATGGTTGTATCTTTGAGGATTCTTT-TAGTGATGACTTCTGCACAATTCACTCTCT 597 Query 591 ACTAGGGAGAAGGTTTTTGGAAGAGAAATCTGTAAAAGATTCCAAAAATAGTAAGCCTAA 650 |||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||| Sbjct 598 ACTAGGGAGAAGGTTTTTGGAAGAAAAAACTGTAAAAGATTCCAAAAATAGTAAGCCTAA 657 Query 651 ATCTGAATATAGCCATGTTAAAGTCAGCATGGCAGGAAGCGGGTTTCTTCTCTTGTGTTG 710 | |||||||||||||||||||||| ||||| |||||||| |||||||||||||||||||| Sbjct 658 AACTGAATATAGCCATGTTAAAGTTAGCATAGCAGGAAGTGGGTTTCTTCTCTTGTGTTG 717 Query 711 CGCGCTTTGTTGTCCTTGCTTCCATAAGGAGAGGAAAGCAAATAGTCATGAAGTTCTACC 770 ||| ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| Sbjct 718 CGCTCTTTGTTGTCCTTGCTTTCATAAAGAGAGGAAAGCAAATAGTCATGAAGTTCTACC 777 Query 771 CAAAGAATCTAACTCAGTGCACCAAGTTTCCTCTTTTGAAATGAGCCCTTCTTCTGAGAA 830 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 778 TAAAGAATCTAACTCAGTGCACCAAGTTTCTTCTTTTGAAATGAGCCCTTCTTCTGAGAA 837 Query 831 GATTCCGCCTAGTCCATTCCGGGCACCACCAAGTCCATCCCGTGTACCGCAAAGTCCATC 890 |||||| | ||||||||||| |||||||||||||||||||| |||||||| |||||||| Sbjct 838 GATTCCACAAAGTCCATTCCGAGCACCACCAAGTCCATCCCGCGTACCGCAGAGTCCATC 897 Query 891 TAGATATGCTATGTCCCCAAGGCCTAGTAGACTGGGACCCTTGAATCTGTCCATGAGTCA 950 ||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| Sbjct 898 TAGATATGCTATGTCCCCAAGGCCTAGTAGACTGGGACCTTTGAATCTGACCATGAGTCA 957 Query 951 AATTAATGCAGCAACCAGCAATTTCT-CAGACAGTCATCAAATCGGTGAAGGAGGCTTTG 1009 |||||| ||||||| | ||||| | |||||||||| ||||| |||||||||||||||| Sbjct 958 GATTAATACAGCAACTGGTAATTT-TGCAGACAGTCACCAAATTGGTGAAGGAGGCTTTG 1016 Query 1010 GGGTAGTCTATAAAGGCTTTCTAGATGATGGCCAGGTGGTTGCCATAAAACGAGCAAAAA 1069 | ||||||| ||||||| ||||||||||||||||||| ||||||||||||||||| |||| Sbjct 1017 GTGTAGTCTTTAAAGGCGTTCTAGATGATGGCCAGGTTGTTGCCATAAAACGAGCCAAAA 1076 Query 1070 AGGAACACTTTGAGAATCTGCGAACGGAATTCAAAAGTGAAGTTGACCTTTTGTCTAAAA 1129 |||||||||||||||||||||||||||| || |||||||||||||||||||||||||||| Sbjct 1077 AGGAACACTTTGAGAATCTGCGAACGGAGTTTAAAAGTGAAGTTGACCTTTTGTCTAAAA 1136 Query 1130 TTGGCCACCGGAATCTAGTGAAGCTTCTTGGTTATGTTGATAAAGGAGACGAGCGACTTA 1189 ||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 1137 TTGGCCACCGGAACCTAGTGAAGCTTCTTGGTTATGTTGACAAAGGAGACGAGCGACTTA 1196 Query 1190 TCATAACCGAGTATGTCAGAAATGGTACACTCCGCGATCACTTGGATGGTGCTCGTGGAA 1249 ||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 1197 TCATAACTGAGTATGTCAGAAATGGTACACTCCGCGATCACTTGGACGGTGCTCGTGGAA 1256 Query 1250 CTAAACTTAATTTCAATCAGAGGTTGGAGATTGTGATTGATGTCTGCCATGGATTGACCT 1309 ||||||||||||||||||| |||||||||||||| ||||||||||||||||| || |||| Sbjct 1257 CTAAACTTAATTTCAATCAAAGGTTGGAGATTGTTATTGATGTCTGCCATGGCTTAACCT 1316 Query 1310 ATCTCCATTCTTATGCAGAAAGACAGATAATCCACCGTGACATAAAATCCTCAAACATTC 1369 ||||||||||||||||||||||||||||||| ||||||||||||||||| || ||||||| Sbjct 1317 ATCTCCATTCTTATGCAGAAAGACAGATAATTCACCGTGACATAAAATCGTCGAACATTC 1376 Query 1370 TACTCACGGATAGCATGAGAGCCAAAGTGGCAGACTTCGGGTTTGCAAGAGGCGGTCCTA 1429 ||||||| |||||||||||||||||||| ||||||||||| ||||| ||||||||||||| Sbjct 1377 TACTCACAGATAGCATGAGAGCCAAAGTAGCAGACTTCGGCTTTGCGAGAGGCGGTCCTA 1436 Query 1430 CTGACTCGAACCAGACCCACATTTTAACTCAAGTGAAAGGAACCGTTGGTTATCTCGATC 1489 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 1437 CTGACTCGAACCAGACTCACATTTTAACTCAAGTGAAAGGAACCGTTGGTTATCTCGATC 1496 Query 1490 CTGAGTACATGAGGACTTATCAGCTCACTGCCAAAAGCGATGTTTACTCATTCGGGATTT 1549 |||||||||||| |||||||| |||||||| ||||||||||||||||| |||||||||| Sbjct 1497 CTGAGTACATGAAAACTTATCATCTCACTGCTAAAAGCGATGTTTACTCGTTCGGGATTT 1556 Query 1550 TGCTTGTGGAGATACTCACAGGCCGTCGTCCAGTGGAGGCCAAGCGACCTCATGATGAGA 1609 |||||||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 1557 TGCTTGTGGAGATACTCACAGGCCGTCGTCCAGTGGAGGCCAAGCGACTTCCTGATGAGA 1616 Query 1610 GGATTACAGTTCGATGGGCATTCGACAAGTACAATGAAGGGAGAGTTTTTGAACTAGTGG 1669 ||||||| || |||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 1617 GGATTACGGTCCGATGGGCATTCGACAAGTACAATGAAGGGCGAGTTTTTGAACTAGTGG 1676 Query 1670 ATCCAAACGCGAGGGAACGAGTAGATGAGAAGATACTAAGAAAGATGTTTAGTTTGGCAT 1729 |||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 1677 ATCCTAACGCGAGGGAACGAGTAGATGAGAAGATACTAAGGAAGATGTTTAGTTTGGCAT 1736 Query 1730 TTCAATGTGCTGCTCCTACCAAAAAAGAGCGGCCGGACATGGAAGCTGTTGGGAAGCAGC 1789 ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||| Sbjct 1737 TTCAATGTGCTGCTCCTACTAAAAAAGAGCGGCCTGACATGGAAGCTGTTGGGAAGCAGC 1796 Query 1790 TTTGGGCTATAAGATCAAGTTATCTCAGGCGGTCAATGGAATAAAACAAAATGCT-ATA- 1847 |||||||||||||||||||||||||||||||||||||||||||| |||| || | | | Sbjct 1797 TTTGGGCTATAAGATCAAGTTATCTCAGGCGGTCAATGGAATAAGACAAG-TGTTCACAC 1855 Query 1848 GT--CT-CT-C-----TG-T-T-GT-TA---GAT---A-ATA-T-T-ACCTCTTTTACAT 1884 || | | | || | | || | | | | ||| | | ||||||||||||| Sbjct 1856 GTTACAACCACCAAAATGCTATAGTCTCTCTGTTGTTAGATAATATCACCTCTTTTACAT 1915 Query 1885 TTTGCTATGAAACCACTTCTTCGTCAGATTTGAAATGAGATGTCTTATTCAT 1936 |||||||| |||||||||||| ||||||||||||||||||||||||||||| Sbjct 1916 TTTGCTATCCAACCACTTCTTCTTCAGATTTGAAATGAGATGTCTTATTCAT 1967 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 95883040950 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5