BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg480296
Length=1790
Score E
Sequences producing significant alignments: (Bits) Value
AT1G66530.1 | Symbols: | Arginyl-tRNA synthetase, class Ic | c... 2717 0.0
AT4G26300.1 | Symbols: emb1027 | Arginyl-tRNA synthetase, class... 2353 0.0
AT4G26288.1 | Symbols: | FUNCTIONS IN: molecular_function unkn... 172 8e-42
AT2G02430.1 | Symbols: | pseudogene, arginyl-tRNA synthetase |... 62.1 2e-08
> AT1G66530.1 | Symbols: | Arginyl-tRNA synthetase, class Ic |
chr1:24818911-24822342 REVERSE LENGTH=1991
Length=1991
Score = 2717 bits (1471), Expect = 0.0
Identities = 1689/1795 (94%), Gaps = 12/1795 (1%)
Strand=Plus/Plus
Query 1 TCTGCTTCAATTTCGATATGGCAACCATTGTAGCTAATAAAGAATTTACGGGAAATCCAA 60
||||||||||||||| ||||||||||||||||||| ||||||||| || ||||||||||
Sbjct 51 TCTGCTTCAATTTCG--ATGGCAACCATTGTAGCTAGTAAAGAATTCACCGGAAATCCAA 108
Query 61 GAAGACAACTGGCTAAGCTCTTTGATGTGTCTCTTAAATTAACAGTTCCTGATGAACCTA 120
|| | ||||| ||||||||||| |||||||| ||||| ||||| ||||||||||||||||
Sbjct 109 GACGCCAACTCGCTAAGCTCTTCGATGTGTCGCTTAAGTTAACGGTTCCTGATGAACCTA 168
Query 121 ATGTTGAGCCCTTGATTGAGCCTGGCAAATTTGGAGATTACCAATGTAACAATGCAATGG 180
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 169 ATGTTGAGCCCTTGATCGAGCCTGGCAAATTTGGAGATTACCAATGTAACAATGCAATGG 228
Query 181 GACTATGGTC-CATTATCAAAGGAAAGGGTACGCAGTTTAAG-GGTCCTCCCGCTGTTGG 238
|||||||||| | | || |||||||||||||||||| || | |||||||||||||||||
Sbjct 229 GACTATGGTCTC-TAATTAAAGGAAAGGGTACGCAG-TTCCGTGGTCCTCCCGCTGTTGG 286
Query 239 ACAGGCTCTTATTAAGAGTCTCCCTACTTCTGAGATGGTGGAATCATGCTCTATAGCTGG 298
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 287 ACAGGCTCTTATTCAGAGTCTCCCTACTTCTGAGATGGTGGAATCATGCTCTATAGCTGG 346
Query 299 ACCTGGATTTGTTAATGTTGTACTATCGGCTAAGTGGATGGCTAAGAGTATTGAAAATAT 358
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 347 TCCTGGATTTGTTAATGTTGTACTATCATCTAAGTGGATGGCTAAGAGTATTGAAAATAT 406
Query 359 GCTTATCGATGGAATTGATACATGGGCGCCTACTCTTTCAGTTAAGAGAGCTGTAGTTGA 418
|||| | ||||| |||||||||||||| ||||||||||| ||||||||||||||||||||
Sbjct 407 GCTTGTTGATGGGATTGATACATGGGCACCTACTCTTTCGGTTAAGAGAGCTGTAGTTGA 466
Query 419 TTTTTCCTCTCCCAACATTGCTAAAGAAATGCATGTTGGTCATCTAAGATCAACTATTAT 478
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||
Sbjct 467 TTTTTCCTCTCCCAACATTGCTAAAGAAATGCATGTTGGTCATCTTAGATCAACTATCAT 526
Query 479 CGGTGATACGCTTGCTCGTATGCTCGAGTACTCAAAGGTTGAAGTTCTACGCAGAAACCA 538
||||| || || ||||| ||||||||||||||||||||||||||||| |||||||||||
Sbjct 527 TGGTGACACTCTAGCTCGCATGCTCGAGTACTCAAAGGTTGAAGTTCTTCGCAGAAACCA 586
Query 539 TGTTGGTGACTGGGGAACACAGTTTGGCATGCTGATTGAGTTTCTCTTTGAGAAATTTCC 598
||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||
Sbjct 587 TGTTGGTGACTGGGGAACACAGTTTGGGATGCTAATTGAGTTTCTCTTTGAGAAATTTCC 646
Query 599 TGATACAGATAGTGTGACCGAGACAGCAATTGGAGATCTTCAGATGTTTTACAAGA-AAT 657
||||||||| ||||||||||||||||| ||||||||||||||| |||||||| ||| |||
Sbjct 647 TGATACAGAGAGTGTGACCGAGACAGCTATTGGAGATCTTCAGGTGTTTTAC-AGAGAAT 705
Query 658 CAAAATTGAAATTTGATTTGGATCCGGAGTTTAAGGAAAAAGCACAACAGGCTGTGGTCC 717
|||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||
Sbjct 706 CAAAATTGAAATTTGATTTGAATCCTGAGTTTAAGGAAAAAGCACAACAGGCTGTGGTCC 765
Query 718 GTCTACAGGGTGGAGATCCTGTTTACCGCAAGGCTTGGGCTAAGATTTGTGAAATCAGCC 777
|||| |||||||||||||||||||||||| |||| |||||||||||||| ||||||||||
Sbjct 766 GTCTTCAGGGTGGAGATCCTGTTTACCGCCAGGCATGGGCTAAGATTTGCGAAATCAGCC 825
Query 778 GAAACGAGTTTGCCAAGGTGTACCAACGCCTTCGAGTCGAGCTTGAAGAAAAGGGAGAAA 837
||||||||||||||||||| ||| ||||||||||| ||||||||||||||||||||||||
Sbjct 826 GAAACGAGTTTGCCAAGGTTTACAAACGCCTTCGAATCGAGCTTGAAGAAAAGGGAGAAA 885
Query 838 GCTTTTACAACCCTTATATCGCTAACGTAATTGAGGAATTGAGCAGCAAGGGGTTAGTTG 897
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 886 GCTTTTACAACCCTTATATCGCTAACGTAATTGAGGAATTGAGCAGCAAGGGGTTAGTTG 945
Query 898 AAGAAAGTAAAGGTGCTCGTGTGATATTCATCGAAGGCTTTAAAGCCCCACTCATTGTTG 957
||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||
Sbjct 946 AAGAAAGTAAAGGTGCTCGTGTGATATTCATTGAAGGCTTTAAAATCCCACTCATTGTTG 1005
Query 958 TAAAGAGTGACGGTGGTTTTAACTATGCCTCAACAGATCTGACTGCTCTTTGGTATCGGC 1017
|||||||||| ||||||||||||||||||||||| ||||| |||||||||||||||||||
Sbjct 1006 TAAAGAGTGATGGTGGTTTTAACTATGCCTCAACTGATCTAACTGCTCTTTGGTATCGGC 1065
Query 1018 TTAATGAAGAGAAAGCTGAGTGGATAATATATTTGACCGACTTTGGCCAGCAGCAGCACT 1077
||||||||||||||||||||||||| |||||| |||||||| |||||||||||||||| |
Sbjct 1066 TTAATGAAGAGAAAGCTGAGTGGATTATATATGTGACCGACGTTGGCCAGCAGCAGCATT 1125
Query 1078 TTCATATGTTCTTCAAAGCTGCCAGAAAAGCAGGCTGGCTTCCAGACGATGATAAAACTT 1137
|| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 1126 TTGATATGTTCTTCAAAGCTGCCAGAAAAGCAGGATGGCTTCCAGACGATGATAAAACTT 1185
Query 1138 ACCCTAGAGTTAATCATGTTGGTTTTGGTCTTGTTCTTGGAGATGATAACAAGCGATTTA 1197
|||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 1186 ACCCTAGAGTTAGCCATGTTGGTTTTGGTCTTGTCCTTGGAGATGATAACAAGCGATTTA 1245
Query 1198 GAACTCGGTCAACAGAGGTAGTCCGCCTAG-TCGATTTACTAGATGAGGCCAAGGATCGC 1256
|||||||| || |||||||||||||||||| | ||||| |||||||||||||||||||||
Sbjct 1246 GAACTCGGGCAGCAGAGGTAGTCCGCCTAGCT-GATTTGCTAGATGAGGCCAAGGATCGC 1304
Query 1257 AGTAAAGCTGCCCTTATTGAGCGTGGTAAGGACAAAGAATGGACACCCGAGGAGCTGGAC 1316
||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||
Sbjct 1305 AGTAAAGCTGCCCTTATTGAGCGCGGTAAGGACAAAGAATGGTCACCCGAGGAGCTGGAC 1364
Query 1317 CAAACAGCTGAGTCAGTTGGATACGGTGCGCTGAAGTATGCTGACCTGAAGACCAACAGA 1376
|||| ||||||| |||||||||| ||||| ||||||||||||||||||||||||||||||
Sbjct 1365 CAAATAGCTGAGGCAGTTGGATATGGTGCCCTGAAGTATGCTGACCTGAAGACCAACAGA 1424
Query 1377 -TTGACGGGTTATACTTTCAGCTTTGATCAAATGCTTAATGACAAGGGAGATACAGCCGT 1435
|| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 1425 ATT-ACGGGTTATACTTTTAGCTTTGATCAAATGCTTAATGACAAGGGAGATACAGCCGT 1483
Query 1436 TTACCTTCTTTACGCCCATGCTCGGATCTGCTCAATCATAAGAAAGTCTGGCAAAGACAT 1495
||||||||| ||||||||||||||||||||||||||||| ||||||||||| ||||||||
Sbjct 1484 TTACCTTCTCTACGCCCATGCTCGGATCTGCTCAATCATCAGAAAGTCTGGAAAAGACAT 1543
Query 1496 AGATGAGCTGAAAAAGACAGGAAAGATAGCATTGGATCATGCAGCGGAACGGGCACTGGG 1555
||||||||| |||||||||||||||||||| |||||||||||||| ||||||||||| ||
Sbjct 1544 AGATGAGCTAAAAAAGACAGGAAAGATAGCGTTGGATCATGCAGCCGAACGGGCACTAGG 1603
Query 1556 GCTTCACCTACTTCAATTTGCTGAGACGGTGGAGGAAGCATGCACCACATTGTTACCGAA 1615
||||||||| ||||| ||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1604 GCTTCACCTGCTTCAGTTTGCTGAGACGGTGGAGGAAGCGTGCACCACATTGTTACCGAA 1663
Query 1616 TGTGCTGTGCAAATACCTTTACTACTTATCTGAAGAGTTCACCAAATTCTACTCCAGTTG 1675
|||||| ||||| ||||||||||||||||| ||||||||||||||||| ||||||| |||
Sbjct 1664 TGTGCTTTGCAAGTACCTTTACTACTTATCCGAAGAGTTCACCAAATTTTACTCCAATTG 1723
Query 1676 TCAGGTGAATGGTTCAGCAGAGGAGACAAGCCGTCTCCTACTATGTGAAGCAACAGCCAT 1735
||||||||||||||| || |||||||| ||||||||| |||| || |||||||| || ||
Sbjct 1724 TCAGGTGAATGGTTCGGCCGAGGAGACGAGCCGTCTCTTACTTTGCGAAGCAACGGCTAT 1783
Query 1736 AGTCATGCGGAAATGCTTCCACCTTCTTGGAATCACCCCTGTTTACAAGCTTTGA 1790
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1784 AGTCATGCGGAAATGCTTCCACCTTCTTGGAATCACCCCTGTTTACAAGCTTTGA 1838
> AT4G26300.1 | Symbols: emb1027 | Arginyl-tRNA synthetase, class
Ic | chr4:13307977-13313109 REVERSE LENGTH=2352
Length=2352
Score = 2353 bits (1274), Expect = 0.0
Identities = 1615/1778 (91%), Gaps = 29/1778 (2%)
Strand=Plus/Plus
Query 32 AGCTAATAAAGAATTTACGGGAAATC-CAAGAAGACAACTGGCTAAGCTCTTTGATGTGT 90
||||||| |||||||||||||||||| || | | ||||| || |||||||||||||| |
Sbjct 162 AGCTAATGAAGAATTTACGGGAAATCTGAA-ACGTCAACTCGCGAAGCTCTTTGATGTTT 220
Query 91 CTCTTAAATTAACAGTTCCTGATGAACCTAATGTTGAGCCCTTGAT---TG----AGC-C 142
|||| |||||||| |||||||||||||||| ||||||||||||| | || || |
Sbjct 221 CTCTAAAATTAACGGTTCCTGATGAACCTAGTGTTGAGCCCTTGGTGGCTGCCTCCGCTC 280
Query 143 -TGGCAAATTTGGAGATTACCAATGTAACAATGCAATGGGACTATGGTCCATTATCAAAG 201
||| |||||||||||||||||||||||||| |||||||||||||||||||| || ||||
Sbjct 281 TTGGAAAATTTGGAGATTACCAATGTAACAACGCAATGGGACTATGGTCCATAATTAAAG 340
Query 202 GAAAGGGTACGCAGTTTAAGGGTCCTCCCGCTGTTGGACAGGCTCTTATTAAGAGTCTCC 261
|||||||||| ||||| ||||||||||| |||||||||||||| ||| ||||||||||||
Sbjct 341 GAAAGGGTACTCAGTTCAAGGGTCCTCCAGCTGTTGGACAGGCCCTTGTTAAGAGTCTCC 400
Query 262 CTACTTCTGAGATGGTGGAATCATGCTCTATAGCTGGACCTGGATTTGTTAATGTTGTAC 321
|||||||||||||||| |||||||||||| ||||||||||||| ||| ||||||||||||
Sbjct 401 CTACTTCTGAGATGGTAGAATCATGCTCTGTAGCTGGACCTGGCTTTATTAATGTTGTAC 460
Query 322 TATCGGCTAAGTGGATGGCTAAGAGTATTGAAAATATGCTTATCGATGGAATTGATACAT 381
|||| ||||||||||||||||||||||||||||||||||| ||||||||| |||| ||||
Sbjct 461 TATCAGCTAAGTGGATGGCTAAGAGTATTGAAAATATGCTCATCGATGGAGTTGACACAT 520
Query 382 GGGCGCCTACTCTTTCAGTTAAGAGAGCTGTAGTTGATTTTTCCTCTCCCAACATTGCTA 441
|||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
Sbjct 521 GGGCACCTACTCTTTCGGTTAAGAGAGCTGTAGTTGATTTTTCCTCTCCCAACATTGCAA 580
Query 442 AAGAAATGCATGTTGGTCATCTAAGATCAACTATTATCGGTGATACGCTTGCTCGTATGC 501
|||||||||||||||||||||||||||||||||| || ||||| || || ||||| ||||
Sbjct 581 AAGAAATGCATGTTGGTCATCTAAGATCAACTATCATTGGTGACACTCTAGCTCGCATGC 640
Query 502 TCGAGTACTCAAAGGTTGAAGTTCTACGCAGAAACCATGTTGGTGACTGGGGAACACAGT 561
||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 641 TCGAGTACTCACATGTTGAAGTTCTACGCAGAAACCATGTTGGTGACTGGGGAACACAGT 700
Query 562 TTGGCATGCTGATTGAGTTTCTCTTTGAGAAATTTCCTGATACAGATAGTGTGACCGAGA 621
|||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 701 TTGGCATGCTAATTGAGTACCTCTTTGAGAAATTTCCTGATACAGATAGTGTGACCGAGA 760
Query 622 CAGCAATTGGAGATCTTCAGATGTTTTACAAGAAATCAAAAT-TGAAATTTGATTTGGAT 680
|||||||||||||||||||| ||||||||||| ||||||| | ||||||||| ||||
Sbjct 761 CAGCAATTGGAGATCTTCAGGTGTTTTACAAGGCATCAAAACAT-AAATTTGATCTGGA- 818
Query 681 CC-GGAGTTTAAGGAAAAAGCACAACAGGCTGTGGTCCGTCTACAGGGTGGAGATCCTGT 739
| || |||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 819 CGAGGCCTTTAAGGAAAAAGCACAACAGGCTGTGGTCCGTCTACAGGGTGGTGATCCTGT 878
Query 740 TTACCGCAAGGCTTGGGCTAAGATTTGTGAAATCAGCCGAAAC-GAGTTTGCCAAGGTGT 798
|||||| ||||||||||||||||| ||||| |||||||||| | |||||||||||||| |
Sbjct 879 TTACCGTAAGGCTTGGGCTAAGATCTGTGACATCAGCCGAA-CTGAGTTTGCCAAGGTTT 937
Query 799 ACCAACGCCTTCGAGTCGAGCTTGAAGAAAAGGGAGAAAGCTTTTACAACCCTTATATCG 858
|||||||||||||||| |||||||||||||||||||||||||||||||||||| |||| |
Sbjct 938 ACCAACGCCTTCGAGTTGAGCTTGAAGAAAAGGGAGAAAGCTTTTACAACCCTCATATTG 997
Query 859 CTAACGTAATTGAGGAATTGAGCAGCAAGGGGTTAGTTGAAGAAAGTAAAGGTGCTCGTG 918
|||| |||||||||||||||| ||||||||||| |||||||||||| ||||||||||||
Sbjct 998 CTAAAGTAATTGAGGAATTGAATAGCAAGGGGTTGGTTGAAGAAAGTGAAGGTGCTCGTG 1057
Query 919 TGATATTCATCGAAGGCTTTAA-AGCCCCACTCATTGTTGTAAAGAGTGACGGTGGTTTT 977
|||| ||| | |||||||| | | ||| |||||| |||||||||||||| |||||||||
Sbjct 1058 TGATTTTCCTTGAAGGCTTCGACATCCC-ACTCATGGTTGTAAAGAGTGATGGTGGTTTT 1116
Query 978 AACTATGCCTCAACAGATCTGACTGCTCTTTGGTATCGGCTTAATGAAGAGAAAGCTGAG 1037
||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||
Sbjct 1117 AACTATGCCTCAACAGATCTGACTGCTCTTTGGTACCGGCTCAATGAAGAGAAAGCTGAG 1176
Query 1038 TGGATAATATATTTGACCGACT-TTGGCCAGCAGCAGCACTTTCATATGTTCTTCAAAGC 1096
||||| |||||| ||||||| | |||||||||||||||||||| ||||||||||||||||
Sbjct 1177 TGGATCATATATGTGACCGA-TGTTGGCCAGCAGCAGCACTTTAATATGTTCTTCAAAGC 1235
Query 1097 TGCCAGAAAAGCAGGCTGGCTTCCAGACGATGATAAAACTTACCCTAGAGTTAATCATGT 1156
||||||||||||||| |||||||||||| ||||||||||||||||||||||||| |||||
Sbjct 1236 TGCCAGAAAAGCAGGTTGGCTTCCAGACAATGATAAAACTTACCCTAGAGTTAACCATGT 1295
Query 1157 TGGTTTTGGTCTTGTTCTTGGAGATGATAACAAGCGATTTAGAACTCGGTCAACAGAGGT 1216
|||||||||||| || ||||| || ||| ||||||||||||||||||| ||||||| ||
Sbjct 1296 TGGTTTTGGTCTCGTCCTTGGGGAAGATGGCAAGCGATTTAGAACTCGGGCAACAGATGT 1355
Query 1217 AGTCCGCCTAGTCGATTTACTAGATGAGGCCAAGGA-TCGCAGTAAAGCT-GCCCTTATT 1274
|||||||||||| ||||| ||||||||||||||| | |||||||||| || |||||||||
Sbjct 1356 AGTCCGCCTAGTTGATTTGCTAGATGAGGCCAAG-ACTCGCAGTAAA-CTTGCCCTTATT 1413
Query 1275 GAGCGTGGTAAGGACAAAGAATGGACACCCGAGGAGCTGGACCAAACAGCTGAGTCAGTT 1334
||||| ||||||||||||||||||||||| || || |||||||||||||||||| |||||
Sbjct 1414 GAGCGCGGTAAGGACAAAGAATGGACACCGGAAGAACTGGACCAAACAGCTGAGGCAGTT 1473
Query 1335 GGATACGGTGCGCTGAAGTATGCTGACCTGAAGACCAACAGATTGACGGGTTATACTTTC 1394
||||| |||||| | ||||||||||||||||||| ||||||||| || ||||||||||
Sbjct 1474 GGATATGGTGCGGTCAAGTATGCTGACCTGAAGAACAACAGATTAACAAATTATACTTTC 1533
Query 1395 AGCTTTGATCAAATGCTTAATGACAAGGGAGATACAGCCGTTTACCTTCTTTACGCCCAT 1454
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1534 AGCTTTGATCAAATGCTTAATGACAAGGGAAATACAGCCGTTTACCTTCTTTACGCCCAT 1593
Query 1455 GCTCGGATCTGCTCAATCATAAGAAAGTCTGGCAAAGACATAGATGAGCTGAAAAAGACA 1514
||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1594 GCTCGGATCTGTTCAATCATCAGAAAGTCTGGCAAAGACATAGATGAGCTGAAAAAGACA 1653
Query 1515 GGAAAGAT-AGCATTGGATCATGCAGCGGAACGGGCACTGGGGCTTCACCTACTTCAATT 1573
||||| || ||||||||||||||||| ||||| ||||||||||||||| | |||| |||
Sbjct 1654 GGAAA-ATTAGCATTGGATCATGCAGATGAACGAGCACTGGGGCTTCACTTGCTTCGATT 1712
Query 1574 TGCTGAGACGGTGGAGGAAGCATGCACCA-CATTGTTACCGAATGTGCTGTGCAAATACC 1632
||||||||||||||||||||| || |||| | || ||||||| ||| |||||| | ||||
Sbjct 1713 TGCTGAGACGGTGGAGGAAGCTTGTACCAAC-TTATTACCGAGTGTTCTGTGCGAGTACC 1771
Query 1633 TTTACTACTTATCTGAAGAGTTCACCAAATTCTACTCCAGTTGTCAGGTGAATGGTTCAG 1692
| ||| | ||||||||| | || |||| ||||||||||| ||||||||| |||||||||
Sbjct 1772 TCTACAATTTATCTGAACACTTTACCAGATTCTACTCCAATTGTCAGGTCAATGGTTCAC 1831
Query 1693 CAGAGGAGACAAGCCGTCTCCTACTATGTGAAGCAACAGCCATAGTCATGCGGAAATGCT 1752
||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||
Sbjct 1832 CAGAGGAGACAAGCCGTCTCCTACTTTGTGAAGCAACGGCCATAGTCATGCGGAAATGCT 1891
Query 1753 TCCACCTTCTTGGAATCACCCCTGTTTACAAGCTTTGA 1790
||||||||||||||||||| || ||||||||| |||||
Sbjct 1892 TCCACCTTCTTGGAATCACTCCGGTTTACAAGATTTGA 1929
> AT4G26288.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; BEST Arabidopsis thaliana protein
match is: oxidative stress 3 (TAIR:AT5G56550.1); Has 289 Blast
hits to 232 proteins in 41 species: Archae - 0; Bacteria
- 12; Metazoa - 36; Fungi - 21; Plants - 151; Viruses - 2;
Other Eukaryotes - 67 (source: NCBI BLink). | chr4:13307461-13308953
FORWARD LENGTH=1366
Length=1366
Score = 172 bits (93), Expect = 8e-42
Identities = 107/114 (94%), Gaps = 0/114 (0%)
Strand=Plus/Minus
Query 1677 CAGGTGAATGGTTCAGCAGAGGAGACAAGCCGTCTCCTACTATGTGAAGCAACAGCCATA 1736
||||| ||||||||| ||||||||||||||||||||||||| ||||||||||| ||||||
Sbjct 926 CAGGTCAATGGTTCACCAGAGGAGACAAGCCGTCTCCTACTTTGTGAAGCAACGGCCATA 867
Query 1737 GTCATGCGGAAATGCTTCCACCTTCTTGGAATCACCCCTGTTTACAAGCTTTGA 1790
||||||||||||||||||||||||||||||||||| || ||||||||| |||||
Sbjct 866 GTCATGCGGAAATGCTTCCACCTTCTTGGAATCACTCCGGTTTACAAGATTTGA 813
> AT2G02430.1 | Symbols: | pseudogene, arginyl-tRNA synthetase
| chr2:635456-636638 FORWARD LENGTH=1183
Length=1183
Score = 62.1 bits (33), Expect = 2e-08
Identities = 33/33 (100%), Gaps = 0/33 (0%)
Strand=Plus/Plus
Query 1476 AGAAAGTCTGGCAAAGACATAGATGAGCTGAAA 1508
|||||||||||||||||||||||||||||||||
Sbjct 139 AGAAAGTCTGGCAAAGACATAGATGAGCTGAAA 171
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 88553761380
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5