BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg480322
Length=2037
Score E
Sequences producing significant alignments: (Bits) Value
AT3G29782.1 | Symbols: | transposable element gene | chr3:1168... 2538 0.0
AT1G42100.1 | Symbols: | transposable element gene | chr1:1572... 2464 0.0
AT1G41893.1 | Symbols: | transposable element gene | chr1:1565... 2316 0.0
AT2G04470.1 | Symbols: | transposable element gene | chr2:1550... 2283 0.0
AT5G35052.1 | Symbols: | transposable element gene | chr5:1331... 2194 0.0
AT3G42186.1 | Symbols: | transposable element gene | chr3:1435... 2028 0.0
AT2G07365.1 | Symbols: | transposable element gene | chr2:3060... 368 1e-100
AT3G42433.1 | Symbols: | transposable element gene | chr3:1455... 209 7e-53
> AT3G29782.1 | Symbols: | transposable element gene | chr3:11684240-11688370
FORWARD LENGTH=4131
Length=4131
Score = 2538 bits (1374), Expect = 0.0
Identities = 1860/2087 (89%), Gaps = 64/2087 (3%)
Strand=Plus/Plus
Query 3 GGGAAGCTTTGCTTACCAATAATTACATCCTCAACATAATACCGCATAAGGTGACTGGTA 62
|||||||||| ||||||| ||| |||||||| || | ||||| ||||||||||||| |
Sbjct 2057 GGGAAGCTTTTCTTACCACTAACTACATCCTTAATAGGATACCACATAAGGTGACTGCAA 2116
Query 63 AGTCACCACATGAACTTTGGAAAGGTACAGTACATTCGTACAAATACCTGAAAGTGTGGG 122
|||||||| |||||||||||||||||||||||| |||||||||||||| ||||||| ||
Sbjct 2117 AGTCACCATATGAACTTTGGAAAGGTACAGTACCCTCGTACAAATACCTAAAAGTGT-GG 2175
Query 123 GGTGCCTAGCAAAAGTGGCTGTACCACCTCCTAAAAAAGTCACAATTGGTCCTAAGACCA 182
|||| |||||||||||||||||||||||||| ||||| ||||||||||| |||||||
Sbjct 2176 GGTGTCTAGCAAAAGTGGCTGTACCACCTCCCAAAAAGGTCACAATTGGGCCTAAGATTG 2235
Query 183 TAGACTGTATCTTCATCGGATATGCGCATAATAGTAGTGCTTATCA-ATTT-TTGGTTCA 240
|||||||||||||||||||||||||||| || || | ||||||| | |||| ||| || |
Sbjct 2236 TAGACTGTATCTTCATCGGATATGCGCACAACAGCAATGCTTAT-AGATTTCTTGTTT-A 2293
Query 241 CAAATCAGATATTCCAGATATC-A-GTAAATACATTTATGGAATCAAGAAATGCATCATT 298
||||| ||||||||||||||| | | ||||||| | |||||||||||||||||||| ||
Sbjct 2294 TAAATCGGATATTCCAGATATCCATGAAAATACAGTCATGGAATCAAGAAATGCATCGTT 2353
Query 299 TTTTGAAGACATTTTCCCTTGTAGGAAAGCTCAAAAACGAACTCGTGAACAACGAGATGC 358
||||||||| ||||| |||||||||||| ||||||||||||||||||| ||||||| |||
Sbjct 2354 TTTTGAAGATATTTTTCCTTGTAGGAAAACTCAAAAACGAACTCGTGATCAACGAGTTGC 2413
Query 359 AGCAATC-TCAGAAGCTGAGGACAATACTTCGGGTACTATTACTGTTGAAGAAACAGAAC 417
||||| | || ||||||||||||||| ||| |||||||||||||||||||||||||||||
Sbjct 2414 AGCAA-CATCGGAAGCTGAGGACAATTCTTTGGGTACTATTACTGTTGAAGAAACAGAAC 2472
Query 418 C--AA----AAGAGC----T---CG---CAAA-GAG----AAA-------TCTTTCGGTG 449
|| |||| | | || |||| ||| ||| ||||||||||
Sbjct 2473 AGGAACCTGAAGATCAACCTAGGCGGAGCAAAAGAGCTCGAAAAGAGAAATCTTTCGGTG 2532
Query 450 ATGACTTCTTGATGGCGTTTCTAGCTGAAAACGTACCAAGAACTTATTCAGAAGCTATGT 509
|||| ||||||||||||||| |||||| ||||||||||||||||||||||||||| ||||
Sbjct 2533 ATGATTTCTTGATGGCGTTTTTAGCTGGAAACGTACCAAGAACTTATTCAGAAGCCATGT 2592
Query 510 CTACACCTGATGCACCTTATTGGAAGGAAGTAGTCAATACTGAAATAGACTCTATCTTGC 569
|| | || |||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 2593 CTTCCCCCGATGCACCTTATTGGAAGGAAGCAGTCAATACTGAAATAGACTCTATCTTGC 2652
Query 570 AACATCATACTTACGAGATAGCAGATCTACCCCAAGGCTCTAAACCATTGGGAAGTAAAT 629
||||||||||||||||||||||| ||||||||||| | |||||||||||||| |||||||
Sbjct 2653 AACATCATACTTACGAGATAGCAAATCTACCCCAAAGTTCTAAACCATTGGGGAGTAAAT 2712
Query 630 GGATTTTCA-TAATATAACGGAAAACCAATGGTGATATTGATAGGTACAAGGCTAGGCTT 688
||||||||| || || || ||||||| |||||||||||||||||||||||||||||||||
Sbjct 2713 GGATTTTCACTATTAAAA-GGAAAACAAATGGTGATATTGATAGGTACAAGGCTAGGCTT 2771
Query 689 GTGGTGCAAGGATTTCGACAAAAAGAATGCTTGGAtttttttGATACCTATTCTCTTGTA 748
||||| ||||||||| ||||||||||| | || ||||| |||||||||||||||| ||||
Sbjct 2772 GTGGTACAAGGATTTTGACAAAAAGAAGGTTTAGATTTCTTTGATACCTATTCTCCTGTA 2831
Query 749 ACGAGAATAACTTCAATCAGGATGCTCATAGGCATTGCTGCCTTACGAGATCTTGAAATC 808
|||| |||||||||||||||||||||||||||| |||| |||||| |||||||||||||
Sbjct 2832 ACGAAAATAACTTCAATCAGGATGCTCATAGGCTTTGCAGCCTTAAGAGATCTTGAAATA 2891
Query 809 CATCAAATGGATGTAAAAACTGCCTTTCTC-CATGGAGATTTGGAAGAGGAAATCTACAT 867
|||||||||||||||||||| || ||||| |||||||||||||| ||||||||||||||
Sbjct 2892 CATCAAATGGATGTAAAAACAGC-TTTCTTACATGGAGATTTGGATGAGGAAATCTACAT 2950
Query 868 GAAACAACCTGAAGGGTTTGTTATCCTAGGACAAGAACACAAAGTGTGTAAACTTGTGAA 927
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 2951 GAAACAACCTGAAGGGTTTGTTATCCCAGGACAAGAACACAAAGTGTGTAAACTTGTGAA 3010
Query 928 GTCATTATATGGACTCAAACAGGCTCCTAAGCAGTGGCATGAGAAGTTTGATAATGTGAT 987
|||| |||| ||||||||||||||||||||||||||||||||||||||||| | ||| ||
Sbjct 3011 GTCACTATACGGACTCAAACAGGCTCCTAAGCAGTGGCATGAGAAGTTTGACAGTGTTAT 3070
Query 988 GATGTCTAATGGCTTTAGCATTAATCAATGTGACAAATGCATATATTTCAAAATTACTCC 1047
||||||||||| |||| ||||||| ||||||| ||||||||||||||||||||||||||
Sbjct 3071 GATGTCTAATGATTTTACCATTAATGAATGTGATAAATGCATATATTTCAAAATTACTCC 3130
Query 1048 AACAGGGTACATTTTGTTATGTTTATATG----C--T---C--ATTTTGGGGAGCAATAA 1096
|| |||||||||||||||||||||||||| | | | || |||||||| || |
Sbjct 3131 AAAAGGGTACATTTTGTTATGTTTATATGTAGACGATATGCTCATCTTGGGGAGTAACAC 3190
Query 1097 AGACATCATAAATCAAA-TGAAAAGCATGCTCAAAAGATATTTTGACATGAAAGACT-TG 1154
||| |||||||||||| | |||| ||||||||||||||||||||| |||||| | | ||
Sbjct 3191 AGATATCATAAATCAATCTAAAAA-CATGCTCAAAAGATATTTTGAAATGAAAAA-TATG 3248
Query 1155 GGTCTACCAGATGTCATTTTGGGTATAAAAATCATCAGAACTGATGAGGGCCTTATCTTG 1214
|||||| ||||||| ||| |||||||||||||||||||||||||||| ||| ||||||||
Sbjct 3249 GGTCTAGCAGATGTTATTCTGGGTATAAAAATCATCAGAACTGATGAAGGCATTATCTTG 3308
Query 1215 TCTCAAACCCACTATCCTGAGAAGATACTTGATCGTTTCAAGCATTACTCAAATGGGACT 1274
||||||||||||||| |||||||||||| |||||||||||||||||||| |||||||||
Sbjct 3309 TCTCAAACCCACTATGATGAGAAGATACTCGATCGTTTCAAGCATTACTCTAATGGGACT 3368
Query 1275 G-AAAAAACTCCAGTAGATCCTCAAATTCACTTGACCAAAAATTCAGGTGAACCTGTGCA 1333
| |||||| |||||| ||||||||| |||||||||| ||||| || ||||||||||||||
Sbjct 3369 GCAAAAAA-TCCAGTTGATCCTCAACTTCACTTGACTAAAAACTCTGGTGAACCTGTGCA 3427
Query 1334 ACAGGTGGAATATGCAAGAGTAATTGGCAGTTTAATGTACTTGACAAACAGTACAAGACC 1393
|||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 3428 ACAGGTAAAATATGCAAGAGTAGTTGGCAGTTTAATGTACTTGACAAACAGTACAAGACC 3487
Query 1394 GGATTTAGCGCACTCTGTAAATGTACTTAGTCGCTACACAAGTAATCCAGGACATAAGCA 1453
|||||||| ||||||||||||||||||||||||||||||||| |||| |||| |||| ||
Sbjct 3488 GGATTTAGTGCACTCTGTAAATGTACTTAGTCGCTACACAAGCAATCAAGGATATAATCA 3547
Query 1454 TTGGAAGGCTATAACTAGAGTTTTGAACTATC-TACGTTATACCAAAGATCATGGCTTGC 1512
||| |||||||||||||||||| ||||||| | || ||||||||||||||||||||||||
Sbjct 3548 TTGCAAGGCTATAACTAGAGTTATGAACTA-CGTATGTTATACCAAAGATCATGGCTTGC 3606
Query 1513 ACTATGGTAAAGAACCCGCAATTTTAGAAGGTTACAGTGATGCCAATTGGATCGCAGACT 1572
|||||||||||||||| || |||| |||||||||||||||||||| || || ||||| |
Sbjct 3607 ACTATGGTAAAGAACCTGCGGTTTTGGAAGGTTACAGTGATGCCAACTGAATAGCAGATT 3666
Query 1573 CCAAGAACTCAAAATCCACAAGTGGATACATCTTTACACTTGGAGGTGCATCAGTGTCTT 1632
|||| ||||| |||||||| |||||||||||||||||||||||| || || |||| || |
Sbjct 3667 CCAAAAACTCTAAATCCACTAGTGGATACATCTTTACACTTGGAAGTCCAGCAGTATCCT 3726
Query 1633 GGAAATCTTGTAAACAAACTGTGGCGGCCAAATCAACTATGGAATCTGAATTCATTGCGT 1692
|||||||| | |||||||||||||| |||||||||||||||||||| |||||||| || |
Sbjct 3727 GGAAATCTAGCAAACAAACTGTGGCAGCCAAATCAACTATGGAATCGGAATTCATAGCAT 3786
Query 1693 TGGATACAGCTGCAGCGGAAGCCGAATGGCTCCGTAATTTCTTGGAAGATATCCCAATGT 1752
|||||||| |||||||||||||||||||||| ||||||||||||||||| || |||||||
Sbjct 3787 TGGATACAACTGCAGCGGAAGCCGAATGGCTTCGTAATTTCTTGGAAGACATTCCAATGT 3846
Query 1753 GGGGGAAACATGTGCCTGCAATACGTGTACACTGTGATAGCCAATC-GTCTATAGGCAGG 1811
|||||| || |||||||||||||||||||||||||||||||||||| || ||||||||||
Sbjct 3847 GGGGGATACCTGTGCCTGCAATACGTGTACACTGTGATAGCCAATCAGT-TATAGGCAGG 3905
Query 1812 GCACGAAGTACCCTATATAATGGTAAATCTCGTCACATAAGACGACGACATAAAACCATT 1871
|||| ||||||||||||||||||||||||||||||||| ||||| ||||||||||||||
Sbjct 3906 GCACAAAGTACCCTATATAATGGTAAATCTCGTCACATCAGACGTTGACATAAAACCATT 3965
Query 1872 AGACAACTTATCTCAACTAGAGTAATCACGATTGATTACATCAGGTCAGCAGACAACCTA 1931
|||||||||||| ||||| |||||||||||| |||||||||| |||| |||||||||
Sbjct 3966 CGACAACTTATCTTAACTAAAGTAATCACGATCGATTACATCAAATCAGTTGACAACCTA 4025
Query 1932 GCGGATCCATTTACAAAAGGTTTGACA-CGAGATCAAGTTGCGAGATCATCAAGAGGAAT 1990
||||||||||||||||||||||||| | |||||||||||||| |||||||||||||||||
Sbjct 4026 GCGGATCCATTTACAAAAGGTTTGA-ATCGAGATCAAGTTGCAAGATCATCAAGAGGAAT 4084
Query 1991 GGGTTTAAAGCCTATGACTTAAGAGGAGGTTTGATGGTAACCCCACC 2037
|||||||||||||| || |||||||| |||||||||||||||||||
Sbjct 4085 GGGTTTAAAGCCTACCACCTAAGAGGAAGTTTGATGGTAACCCCACC 4131
> AT1G42100.1 | Symbols: | transposable element gene | chr1:15721695-15724485
FORWARD LENGTH=2791
Length=2791
Score = 2464 bits (1334), Expect = 0.0
Identities = 1830/2060 (89%), Gaps = 71/2060 (3%)
Strand=Plus/Plus
Query 1 GGGGGAAGCTTTGCTTACCAATAATTACATCCTCAACATAATACCGCATAAGGTGACTGG 60
|||||||||||||||||||| ||| ||||||||||| | ||||| ||||||||||||
Sbjct 745 GGGGGAAGCTTTGCTTACCACTAACTACATCCTCAATAGGATACCACATAAGGTGACTAC 804
Query 61 TAAGTCACCACATGAACTTTGGAAAGGTACAGTACATTCGTACAAATACCTGAAAG-TGT 119
|||||||||||||||||||||||||||||| ||| |||||||||||||| |||| |||
Sbjct 805 AAAGTCACCACATGAACTTTGGAAAGGTACAATACCCTCGTACAAATACCT-AAAGGTGT 863
Query 120 GGGGGTGCCTAGCAAAAGTGGCTGTACCACCTCCTAAAAAAGTCACAATTG-GTCCTAAG 178
||||||| ||||||||||||| |||||||||||| ||| | |||||||||| | ||||||
Sbjct 864 GGGGGTGTCTAGCAAAAGTGGTTGTACCACCTCCCAAAGAGGTCACAATTGTG-CCTAAG 922
Query 179 ACCATAGACTGTATCTTCATCGGATATGCGCATAATAGTAGTGCTTATCAATTT-TTGGT 237
||| |||||||||||||||||||||||||||| || | |||||||||| |||| ||| |
Sbjct 923 ACCGTAGACTGTATCTTCATCGGATATGCGCACAACAACAGTGCTTATCGATTTCTTG-T 981
Query 238 TCACAAATCAGATATTCCAGATATC-A-GTAAATACATTTATGGAATCAAGAAATGCATC 295
| | |||| |||| ||||||||||| | | ||||||| |||||||||||||||||| |||
Sbjct 982 TAATAAATTAGATTTTCCAGATATCCATGAAAATACAGTTATGGAATCAAGAAATGTATC 1041
Query 296 ATTTTTTGAAGACATTTTCCCTTGTAGGAAAGCTCAAAAACGAACTCGTGAACAACGAGA 355
||| |||||||| ||||| |||||||||||| ||||||||||||||||||||||||||||
Sbjct 1042 ATTCTTTGAAGATATTTTTCCTTGTAGGAAAACTCAAAAACGAACTCGTGAACAACGAGA 1101
Query 356 TGCAGCAATCTCAGAAGCTGAGGACAATACTTCGGGTACTATTACTGTTGAAGAAACAG- 414
| || ||| ||| ||||||||||| || |||| ||||||||||||||||||||||||||
Sbjct 1102 TTCAACAACCTCGGAAGCTGAGGAAAACACTTTGGGTACTATTACTGTTGAAGAAACAGT 1161
Query 415 AAC-CAAAA-GA-G--C----T---CG---CAAA-GAG-----AAA------TCTTTCGG 447
|| ||| | || | | | || |||| ||| ||| ||||||||
Sbjct 1162 AAAGCAACATGAAGAACAACCTAAGCGGAGCAAAAGAGCTCGCAAAGAGAAATCTTTCGG 1221
Query 448 TGATGACTTCTTGATGGCGTTTCTAGCTGAAAACGTACCAAGAACTTATTCAGAAGCTAT 507
|||||| ||||||||||||||||||||||||||||||||||||||||||| |||||| ||
Sbjct 1222 TGATGATTTCTTGATGGCGTTTCTAGCTGAAAACGTACCAAGAACTTATTTAGAAGCCAT 1281
Query 508 GTCTA-CACCTGATGCACCTTATTGGAAGGAAGTAGTCAATACTGAAATAGACTCTATCT 566
||||| | ||||||||| |||| |||||||||| |||||||||||| |||||||||||||
Sbjct 1282 GTCTATC-CCTGATGCATCTTAGTGGAAGGAAGCAGTCAATACTGAGATAGACTCTATCT 1340
Query 567 TGCAACATCATACTTACGAGATAGCAGATCTACCCCAAGGCTCTAAACCATT-GGGAAGT 625
|||||||||||||| ||||||||||||||||||||||||| ||||||||||| |||| ||
Sbjct 1341 TGCAACATCATACTCACGAGATAGCAGATCTACCCCAAGGTTCTAAACCATTAGGGA-GT 1399
Query 626 AAATGGATTTTCA-TAATATAACGGAAAACCAATGGTGATATTGATAGGTACAAGGCTAG 684
||||||||||||| || || || ||||||| ||||||||||||||||||||||||| |||
Sbjct 1400 AAATGGATTTTCACTATTAAAA-GGAAAACGAATGGTGATATTGATAGGTACAAGGGTAG 1458
Query 685 GCTTGTGGTGCAAGGATTTCGACAAAAAGAATGCTTGGAtttttttGATACCTATTCTCT 744
||||||||| ||||||||| ||||||||||| | || ||||| |||||||| |||||||
Sbjct 1459 GCTTGTGGTACAAGGATTTTGACAAAAAGAAGGTTTAGATTTCTTTGATACATATTCTCC 1518
Query 745 TGTAACGAGAATAACTTCAATCAGGATGCTCATAGGCATTGCTGCCTTACGAGATCTTGA 804
|||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||
Sbjct 1519 GGTAACGAGAATAACTTCAATCAGGATGCTCGTAGGCATTGCAGCCTTACGAGATCTTGA 1578
Query 805 AATCCATCAAATGGATGTAAAAACTGCCTTTCTCCA-TGGAGATTTGGAAGAGGAAATCT 863
||| |||||||||||||||||||| || ||||| | |||||||||||||||| ||||||
Sbjct 1579 AATACATCAAATGGATGTAAAAACAGC-TTTCTTAAATGGAGATTTGGAAGAGAAAATCT 1637
Query 864 ACATGAAACAACCTGAAGGGTTTGTTATCCTAGGACAAGAACACAAAGTGTGTAAACTTG 923
|||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1638 ACATGAAACAACATGAAGGGTTTGTTATCCCAGGACAAGAACACAAAGTGTGTAAACTTG 1697
Query 924 TGAAGTCATTATATGGACTCAAAC-AGGCTCCTAAGCAGTGGCATGAGAAGTTTGATAAT 982
|||||||| ||| |||||||||| || |||||||||||||||||||||||||||| | |
Sbjct 1698 TGAAGTCACGATACGGACTCAAACCAG-CTCCTAAGCAGTGGCATGAGAAGTTTGACAGT 1756
Query 983 GTGATGATGTCTAATGGCTTTAGCATTAATCAATGTGACAAATGCATATATTTCAAAATT 1042
|| ||||||| |||||| |||| ||||||| |||||||||||||||||||||||||| ||
Sbjct 1757 GTTATGATGTATAATGGTTTTACCATTAATGAATGTGACAAATGCATATATTTCAAATTT 1816
Query 1043 ACTCCAACAGGGTACATTTTGTTATGTTTATATG----C--T---CA-T--T-TTGGGGA 1089
|||||||||||||||||||||||||||||||||| | | | | | |||||||
Sbjct 1817 ACTCCAACAGGGTACATTTTGTTATGTTTATATGTAGACAATATGCGCTCATCTTGGGGA 1876
Query 1090 GCAATAAAGACATCATAAATCAAATGAAAAGCATGCTCAAAAGATATTTTGACATGAAAG 1149
||| | | | ||||||||| ||| ||||| |||||||||| |||||||| | |||||||
Sbjct 1877 ACAACACATATATCATAAATAAAACGAAAAACATGCTCAAA-GATATTTTTAAATGAAAG 1935
Query 1150 ACTTGGGTCTACCAGATGTCATTTTGGGTATAAAAATCATCAGAACTGATGAGGGCCTTA 1209
|| |||||||| | ||||| ||||||| ||||||||||||||||| |||||| || ||||
Sbjct 1936 ACATGGGTCTAGCGGATGTTATTTTGG-TATAAAAATCATCAGAATTGATGAAGGTCTTA 1994
Query 1210 TCTT-GTCTCAAACCCACTATCCTGAGAAGATACTTGATCGTTTCAAGCATTACTCAAAT 1268
||| |||||||||||||||| |||||||||||||||||||||||||||||||||| |||
Sbjct 1995 -CTTTGTCTCAAACCCACTATGCTGAGAAGATACTTGATCGTTTCAAGCATTACTCTAAT 2053
Query 1269 GGGACTGAAAAAACTCCAGTAGATCCTCAAATTCACTTGACCAAAAATTCAGGTGAACCT 1328
||||||| |||||||||||||||||||||| ||||||||| |||||| || |||||||||
Sbjct 2054 GGGACTGCAAAAACTCCAGTAGATCCTCAACTTCACTTGATCAAAAACTCTGGTGAACCT 2113
Query 1329 GTGCAACAGGTGGAATATGCAAGAGTAATTGGCAGTTTAATGTACTTGACAAACAGTACA 1388
|||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 2114 GTGCAACAAGTGGAATATGCAAGAGTAATTGGTAGTTTAATGTACTTGACAAACAGTACA 2173
Query 1389 AGACCGGATTTAGCGCACTCTGTAAATGTACTTAGTCGCTACACAAGTAATCCAGGACAT 1448
||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||
Sbjct 2174 AGACCGGATTTAGCGCACTCTATAAATGTACTTAGTCACTACACAAGTAATCCAGGACAT 2233
Query 1449 AAGCATTGGAAGGCTATAACTAGAGTTTTGAACTATCTACGTTATACCAAAGATCATGGC 1508
||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||
Sbjct 2234 AAGCATTGGAAGGCTATAACTAGAGTTTTGAACTACCTACGTTATACAAAAGATCATGGC 2293
Query 1509 TTGCACTATGGTAAAGAACCCGCAATTTTAGAAGGTTACAGTGATGCCAATTGGATCGCA 1568
||||| |||||||||||||||||| |||| |||||||||| ||||||||| |||||||||
Sbjct 2294 TTGCAATATGGTAAAGAACCCGCAGTTTTGGAAGGTTACAATGATGCCAACTGGATCGCA 2353
Query 1569 GACTCCAAGAACTCAAAATCCACAAGTGGATACATCTTTACACTTGGAGGTGCA-TCAGT 1627
| ||||| ||||| ||||||||||||||||||||||||||||||||| ||||| | |||
Sbjct 2354 AATTCCAAAAACTCTAAATCCACAAGTGGATACATCTTTACACTTGGATGTGCAGT-AGT 2412
Query 1628 GTCTTGGAAATCTTGTAAACAAACTGTGGCGGCCAAATCAACTATGGAATCTGAATTCAT 1687
|| ||||||||| | ||||||||| |||| || |||||||||||||||| |||||||||
Sbjct 2413 ATCCTGGAAATCTAGCAAACAAACTATGGCAGCGAAATCAACTATGGAATTTGAATTCAT 2472
Query 1688 TGCGTTGGATACAGCTGCAGCGGAAGCCGAATGGCTCCGTAATTTCTTGGA-AGATATCC 1746
| ||||||| | ||||||||||||||||||||||||||||||||||| | ||| || |
Sbjct 2473 AGAATTGGATAAAACTGCAGCGGAAGCCGAATGGCTCCGTAATTTCTTG-ATAGACATTC 2531
Query 1747 CAATGTGGGGGAAACATGTGCCTGCAATACGTGTACACTGTGATAGCCAATC-GTCTATA 1805
|| |||||||||||| |||||||||||||||||||||||||||||||||||| | |||||
Sbjct 2532 CAGTGTGGGGGAAACCTGTGCCTGCAATACGTGTACACTGTGATAGCCAATCAG-CTATA 2590
Query 1806 GGCAGGGCACGAAGTACCCTATATAATGGTAAATCTCGTCACATAAGACGACGACATAAA 1865
||| ||||| |||||||| ||||||||||||||||| || ||| |||||||||||||||
Sbjct 2591 AGCATGGCACAAAGTACCCAATATAATGGTAAATCTCATCTCATCAGACGACGACATAAA 2650
Query 1866 ACCATTAGACAACTTATCTCAACTAGAGTAATCACGATTGATTACATCAGGTCAGCAGAC 1925
||||||||||||||||||| |||| ||||||||||||| |||||||||| |||||| |||
Sbjct 2651 ACCATTAGACAACTTATCTAAACTGGAGTAATCACGATCGATTACATCAAGTCAGCTGAC 2710
Query 1926 AACCTAGCGGATCCATTTACAAAAGGTTTGACA-CGAGATCAAGTTGCGAGATCATCAAG 1984
|||||||||||| |||||| ||||||||||| | | |||||||||||| |||||||||||
Sbjct 2711 AACCTAGCGGATTCATTTATAAAAGGTTTGA-ATCAAGATCAAGTTGCAAGATCATCAAG 2769
Query 1985 AGGAATGGGTTTAAAGCCTA 2004
||||||||||||||||||||
Sbjct 2770 AGGAATGGGTTTAAAGCCTA 2789
> AT1G41893.1 | Symbols: | transposable element gene | chr1:15657492-15660261
FORWARD LENGTH=2770
Length=2770
Score = 2316 bits (1254), Expect = 0.0
Identities = 1783/2025 (88%), Gaps = 90/2025 (4%)
Strand=Plus/Plus
Query 1 GGGGGAAGCTTTGCTTACCAATAATTACATCCTCAACATAATACCGCATAAGGTGACTGG 60
|||||||| ||||||||||| ||| ||||||||||||| ||||| |||||||||||||
Sbjct 723 GGGGGAAGTTTTGCTTACCACTAACTACATCCTCAACAGGATACCACATAAGGTGACTGC 782
Query 61 TAAGTCACCACATGAACTTTGGAAAGGTACAGTACATTCGTACAAATACCTGAAAGTGTG 120
||| |||||||||||||||||||||||||||||| |||||||||||||| ||||||||
Sbjct 783 AAAGGCACCACATGAACTTTGGAAAGGTACAGTACCCTCGTACAAATACCTAAAAGTGTG 842
Query 121 GGGGTGCCTAGCAAAAGTGGCTGTACCACCTCCTAAAAAAGTCACAATTGGTCCTAAGAC 180
|||||| ||||||||||||| |||||||||||| ||| | ||||||||||| ||||||||
Sbjct 843 GGGGTGTCTAGCAAAAGTGGATGTACCACCTCCCAAAGAGGTCACAATTGGGCCTAAGAC 902
Query 181 CATAGACTGTATCTTCATCGGATATGCGCATAATAGTAGTGCTTATCAATTT-TTGGTTC 239
| |||| ||||||||||||||||||||||| || || |||||||||| |||| ||| ||
Sbjct 903 CGTAGATTGTATCTTCATCGGATATGCGCACAACAGCAGTGCTTATCGATTTCTTG-TTA 961
Query 240 ACAAATCAGA-TATTCCAGATATC-A-GTAAATACATTTATGGAATCAAGAAATGCATCA 296
| ||||| || ||||||||||||| | | ||||||||||||||||||||||||||||||
Sbjct 962 AAAAATC-GAATATTCCAGATATCCATGAAAATACATTTATGGAATCAAGAAATGCATCG 1020
Query 297 TTTTTTGAAGACATTTTCCCTTGTAGGA-AAGCTCAAAAA-CGAACTCGTGAACAACGAG 354
|| |||||||| ||||| |||||||||| || |||||||| | |||||||||||||||||
Sbjct 1021 TTCTTTGAAGATATTTTTCCTTGTAGGAGAA-CTCAAAAAACAAACTCGTGAACAACGAG 1079
Query 355 ATGCAGCAATCTCAGAAGCTGAGGACAATACTTCGGGTACTATTACTGTTGAAGAAACAG 414
|| || ||| ||| || |||||||| |||| || ||||||||||||||||||||||||||
Sbjct 1080 ATTCAACAACCTCGGAGGCTGAGGAAAATAGTTTGGGTACTATTACTGTTGAAGAAACAG 1139
Query 415 -AA-----CC--AA-AAGAGC-T---CG---CAAA-GAG-----AAA------TCTTTCG 446
|| || || || | | | || |||| ||| ||| |||||||
Sbjct 1140 TAAAGGAACCTGAAGAACAACCTAGGCGGAGCAAAAGAGCTCGCAAAGAGAAATCTTTCG 1199
Query 447 GTGATGACTTCTTGATGGCGTTTCTAGCTGAAAACGTACCAAGAACTTATTCAGAAGCTA 506
||||||| |||||||||| |||| ||||||||||| |||||||||||||||||||||| |
Sbjct 1200 GTGATGATTTCTTGATGGTGTTTTTAGCTGAAAACATACCAAGAACTTATTCAGAAGCCA 1259
Query 507 TGTCTA-CACCTGATGCACCTTATTGGAAGGAAGTAGTCAATACTGAAATAGACTCTATC 565
|||||| | ||||||||| |||||||||||||||||||||||| ||| ||||||||||||
Sbjct 1260 TGTCTATC-CCTGATGCATCTTATTGGAAGGAAGTAGTCAATATTGAGATAGACTCTATC 1318
Query 566 TTGCAACATCATACTTACGAGATAGCAGATCTACCCCAAGGCTCTAAACCATTGGGAAGT 625
||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||
Sbjct 1319 TTGCAACATCATACTTACGAGATAGCAGATCTACCCCAAGGTTCTAAACCATTGGGGAGT 1378
Query 626 AAATGGATTTTCA-TAATATAACGGAAAACCAATGGTGATATTGATAGGTACAAGGCTAG 684
||||||||||| | || || || ||||| | |||||||||||||||||||||||||||||
Sbjct 1379 AAATGGATTTTTACTATTAAAA-GGAAA-CGAATGGTGATATTGATAGGTACAAGGCTAG 1436
Query 685 GCTTGTGGTGCAAGGATTTCGACAAAAAGAATGCTTGGAtttttttGA-TACCTATTCTC 743
||||||| | |||||||||||||||||| || | || ||||| ||||| ||| |||||||
Sbjct 1437 GCTTGTGATACAAGGATTTCGACAAAAAAAAGGTTTAGATTTCTTTGAATACATATTCTC 1496
Query 744 TTGTAACGAGAATAACTTCAATCAGGATGCTCATAGGCATTGCTGCCTTACGAGATCTTG 803
||||||||| |||||| |||||||||||||||| ||||||| |||||||||||||||
Sbjct 1497 CAGTAACGAGATTAACTTTAATCAGGATGCTCATAAGCATTGCAACCTTACGAGATCTTG 1556
Query 804 AAATCCATCAAATGGATGTAAAAACTGCCTTTCTCCA-TGGAGATTTGGAAGAGGAAATC 862
|||| |||||||||||||||||||| || ||||| | ||||| ||||||||||||||||
Sbjct 1557 AAATACATCAAATGGATGTAAAAACAGC-TTTCTTAAATGGAG-TTTGGAAGAGGAAATC 1614
Query 863 TACATGAAACAACCTGAAGGGTTTGTTATCCTAGGACAAGAACACAAAGTGTGTAAACTT 922
||||||||||||| ||||||||||||||||||| |||||||||||||| ||| |||||||
Sbjct 1615 TACATGAAACAACATGAAGGGTTTGTTATCCTAAGACAAGAACACAAAATGTATAAACTT 1674
Query 923 GTGAAGTCATTATATGGACTCAAACAGGCTCCTAAGCAGTGGCATGAGAAGTTTGATAAT 982
||||||||| |||| ||||||||||||||||||||| ||||||||||||||||||| | |
Sbjct 1675 GTGAAGTCACTATACGGACTCAAACAGGCTCCTAAGTAGTGGCATGAGAAGTTTGACAGT 1734
Query 983 GTGATGATGTCTAATGGCTTTAGCATTAATCAATGTGACAAATGCATATATTTCAAAATT 1042
|| |||||||||||||| |||| ||||||| |||||||||||||||||||||||||||||
Sbjct 1735 GTTATGATGTCTAATGGTTTTACCATTAATGAATGTGACAAATGCATATATTTCAAAATT 1794
Query 1043 ACTCCAACAGGGTACATTTTGTTATGTTTATATG----C--T---C--ATTTTGGGGAGC 1091
|||||||||||||||||||||||||||||||||| | | | || ||||||| |
Sbjct 1795 ACTCCAACAGGGTACATTTTGTTATGTTTATATGTAGACGATATGCTCATATTGGGGAAC 1854
Query 1092 AATAAAGACATCATAAATCAAA-TGAAAAGCATGCTCAAAAGATATTTTGACATGAAAGA 1150
|| | | | ||||||||||||| | |||| |||||||||||||| |||||| ||||||||
Sbjct 1855 AACACATATATCATAAATCAAACTAAAAA-CATGCTCAAAAGATCTTTTGAAATGAAAGA 1913
Query 1151 CTTGGGTCTACCAGATGTCATTTTGGGTATAAAAATCATCAGAACTGATGAGGGCCTTAT 1210
| |||||||| ||||||| ||||||||||||||||||||||||||| |||| || ||||
Sbjct 1914 CATGGGTCTAGCAGATGTTATTTTGGGTATAAAAATCATCAGAACTAATGAAGGTCTTAC 1973
Query 1211 CTTGTCTCAAACCCACTATCCTGAGAAGATACTTGATCGTTTCAAGCATTACTCAAATGG 1270
||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||
Sbjct 1974 CTTGTCTCAAACCCACTATTCTGAGAAGATACTTGATCGTTTCAAGCATTACTCTAATGA 2033
Query 1271 GACTGAAAAAACTCCAGTAGATCCTCAAATTCACTTGACCAAAAATTCAGGTGAACCTGT 1330
||||| ||||||||| | |||| ||| ||| | | ||||||| |||
Sbjct 2034 GACTGCAAAAACTCC--T-GATCA--AAA---ACT---C------T---GGTGAACATGT 2073
Query 1331 GCAACAGGTGGAATATGCAAGAGTAATTGGCAGTTTAATGTACTTGACAAACAGTACAAG 1390
||||||||||||||||||||||||||||||||||||||||||||| | || |||||||||
Sbjct 2074 GCAACAGGTGGAATATGCAAGAGTAATTGGCAGTTTAATGTACTTTA-AA-CAGTACAAG 2131
Query 1391 ACCGGATTTAGCGCACTCTGTAAATGTACTTAGTCGCTACACAAGTAATCCAGGACATAA 1450
|||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 2132 ACCGGATTTAATGCACTCTATAAATGTACTTAGTCGCTACACAAGTAATCCAGGACATAA 2191
Query 1451 GCATTGGAAGGCTATAACTAGAGTTTTGAACTATCTACGTTATACCAAAGATCATGGCTT 1510
||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||
Sbjct 2192 GCATTGGAAGGCTATAACTAGAGTTTTGAACTACCTACATTATACCAAAGATCATGGCTT 2251
Query 1511 GCACTATGGTAAAGAACCCGCAATTTTAGAAGGTTACAGTGATGCCAATTGGATCGCAGA 1570
||| |||||||||||||||||| |||| |||||||||||||||||||| |||||||||||
Sbjct 2252 GCAATATGGTAAAGAACCCGCAGTTTTGGAAGGTTACAGTGATGCCAACTGGATCGCAGA 2311
Query 1571 CTCCAAGAACTCAAAATCCACAAGTGGATACATCTTTACACTTGGAGGTGCA-TCAGTGT 1629
||||| ||||| ||||||||||||||||||||||||||||||||||||||| | ||| |
Sbjct 2312 TTCCAAAAACTCTAAATCCACAAGTGGATACATCTTTACACTTGGAGGTGCAGT-AGTAT 2370
Query 1630 CTTGGAAATCTTGTAAACAAA-CTGTGGCGGCCAAATCAACTATGGAATCTGAATTCATT 1688
| ||||||||| | ||| ||| | ||||| || ||||||||||||||||||||||||||
Sbjct 2371 CCTGGAAATCTAGCAAATAAATC-GTGGCAGCGAAATCAACTATGGAATCTGAATTCATA 2429
Query 1689 GCGTTGGATACAGCTGCAGCGGAAGCCGAATGGCTCCGTAATTTCTTGGAAGATATCCCA 1748
| ||||||||| |||||||||||||||||||||||||||||||| ||||||| || |||
Sbjct 2430 GTATTGGATACAACTGCAGCGGAAGCCGAATGGCTCCGTAATTTCCTGGAAGACATTCCA 2489
Query 1749 ATGTGGGGGAAACATGTGCCTGCAATACGTGTACACTGTGATAGCCAATC-GTCTATAGG 1807
||||||||||||| |||||||||||||||||||||| |||||||||| || | ||| ||
Sbjct 2490 ATGTGGGGGAAACCTGTGCCTGCAATACGTGTACACCGTGATAGCCATTCAG-CTAAAGA 2548
Query 1808 CAGGGCACGAAGTACCCTATATAATGGTAAATCTCGTCACATAAGACGACGACATAAAAC 1867
|| || || ||||||||||||||||||||||||||||| ||| |||||| ||||||||||
Sbjct 2549 CATGG-ACAAAGTACCCTATATAATGGTAAATCTCGTCTCATTAGACGATGACATAAAAC 2607
Query 1868 CATTAGACAACTTATCTCAACTAGAGTAATCACGATTGATTACATCAGGTCAGCAGACAA 1927
|||||||||||||||||||||| ||||||||||||| |||||||||| |||||| |||||
Sbjct 2608 CATTAGACAACTTATCTCAACTGGAGTAATCACGATCGATTACATCAAGTCAGCTGACAA 2667
Query 1928 CCTAGCGGATCCATTTACAAAAGGTTTGACA-CGAGATCAAGTTG 1971
||||| ||||||||||||||||||||||| | |||||||||||||
Sbjct 2668 CCTAGTGGATCCATTTACAAAAGGTTTGA-ATCGAGATCAAGTTG 2711
> AT2G04470.1 | Symbols: | transposable element gene | chr2:1550133-1553029
REVERSE LENGTH=2897
Length=2897
Score = 2283 bits (1236), Expect = 0.0
Identities = 1696/1912 (89%), Gaps = 55/1912 (3%)
Strand=Plus/Plus
Query 168 TTGGTCCTAAGACCATAGACTGTATCTTCATCGGATATGCGCATAATAGTAGTGCTTATC 227
|||| | ||||||| |||||||||||||||||||||||||||| || |||||||||||||
Sbjct 999 TTGGGCTTAAGACCGTAGACTGTATCTTCATCGGATATGCGCACAACAGTAGTGCTTATC 1058
Query 228 AATTTTTGGT-TCACAAATCAGATATTCCAGATATC-A-GTAAATACATTTATGGAATCA 284
||||||||| | | ||||||| ||||||| ||||| | | ||||||| |||||||||||
Sbjct 1059 GATTTTTGGTGT-ATAAATCAGGTATTCCAAATATCCATGAAAATACAGTTATGGAATCA 1117
Query 285 AGAAATGCATCATTTTTTGAAGACATTTTCCCTTGTAGGAAAGCTCAAAAACGAACT-CG 343
| |||| |||| ||||| |||| |||||| || || |||| ||||||||||||| |
Sbjct 1118 ACAAATTCATCGTTTTTA-AAGATGTTTTCCTTTATAAAAAAGATCAAAAACGAACTTC- 1175
Query 344 TGAACAACGAGATGCAGCAATCTCAGAAGCTGAGGACAATACTTCGGGTACTATTACTGT 403
|||||||||||||||||||| ||| |||||||| |||||||||| |||||||||||||||
Sbjct 1176 TGAACAACGAGATGCAGCAACCTCGGAAGCTGAAGACAATACTTTGGGTACTATTACTGT 1235
Query 404 TGAAGAAACAGAACC--AA----AAGAGC-TC---G-C--A--AA--GAG----AAA--- 439
|||||||||||||| || |||| | || | | | || ||| |||
Sbjct 1236 TGAAGAAACAGAACAGGAACTTGAAGAACATCCTAGGCGGATCAAAAGAGCTTGAAAGAG 1295
Query 440 ---TCTTTCGGTGATGACTTCTTGATGGCGTTTCTAGCTGAAAACGTACCAAGAACTTAT 496
||||| ||||||| ||||||||||||||| |||||||||||||||||| ||| |||
Sbjct 1296 AAATCTTTATGTGATGATTTCTTGATGGCGTTTTTAGCTGAAAACGTACCAA-AACCTAT 1354
Query 497 TCAGAAGCTATGTCTACACCT-GATGCACCTTATTGGAAGGAAGTAGTCAATACTGAAAT 555
|||||||| |||||||| ||| |||||||||||||||||||||| |||||||||||||||
Sbjct 1355 TCAGAAGCAATGTCTAC-CCTTGATGCACCTTATTGGAAGGAAGCAGTCAATACTGAAAT 1413
Query 556 AGACTCTATCTTGCAACATCATACTTACGAGATAGCAGATCTACCCCAAGGCTCTAAACC 615
||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 1414 AGACTCTATTTTGCAACATCATACTTACGAGATAGCATATCTACCCCAAGGCTCTAAACC 1473
Query 616 ATTGGG-AAGTAAATGGA-TTTTCATAATATAACGGAAAACCAATGGTGATATTGATAGG 673
|||||| ||| |||| | |||||| |||| || |||||| ||||||||||||||||||
Sbjct 1474 ATTGGGGAAG-AAATAAAATTTTCACAATAAAAAAGAAAACGAATGGTGATATTGATAGG 1532
Query 674 TACAAGGCTAGGCTTGTGGTGCAAGGATTTCGACAAAAAGAATGCTTG-GAtttttttGA 732
|||||||||||||||| ||| |||||||||||||||||| || | || ||||| |||||
Sbjct 1533 TACAAGGCTAGGCTTGGGGTACAAGGATTTCGACAAAAAAAAAGGTTTAGATTTCTTTGA 1592
Query 733 TACCTATTCTCTTGTAACGAGAATAACTTCAATCAGGATGCTCATAGGCATTGCTGCCTT 792
||||||||||| |||||||||||| ||||||||| |||||||||||||||||| |||||
Sbjct 1593 TACCTATTCTCCGGTAACGAGAATATCTTCAATCAAGATGCTCATAGGCATTGCAGCCTT 1652
Query 793 ACGAGATCTTGAAATCCATCAAATGGATGTAAAAACTGCCTTTCTCCATGGAGATTTGGA 852
|| |||||||||||||||||||| |||||||||||| ||||| | |||||||||||||
Sbjct 1653 ACTAGATCTTGAAATCCATCAAACGGATGTAAAAACAACCTTTTTAAATGGAGATTTGGA 1712
Query 853 AGAGGAAA-TCTACATGAAACAACCTGAAGGGTTTGTTATCCTAGGACAAGAACACAAAG 911
|||| ||| ||||||||||||||||| ||||||||||||||| |||||||||||||||||
Sbjct 1713 AGAGAAAAATCTACATGAAACAACCTAAAGGGTTTGTTATCCCAGGACAAGAACACAAAG 1772
Query 912 TGTGTAAACTTGTGAAGTCATTATATGGACTCAAACAGGCTCCTAAGCAGTGGCATGAGA 971
| |||||||||||||||||| |||| ||||||||||||||||||||| ||||||||||||
Sbjct 1773 TATGTAAACTTGTGAAGTCACTATACGGACTCAAACAGGCTCCTAAGTAGTGGCATGAGA 1832
Query 972 AGTTTGA-TAATGTGATGATGTCTAATGGCTT-TAGCATTAATCAATGTGACAAATGCAT 1029
| ||||| | ||| |||||||||||| || || ||||||| ||| | ||||||||||
Sbjct 1833 AATTTGACTT-TGTTATGATGTCTAATAA-TTATACCATTAATGAATATTACAAATGCAT 1890
Query 1030 ATATTTCAAAATTACTCCAACAGGGTACATTTTGTTATGTTTATATGCTCATTTTGGGGA 1089
|||||||||||||||||||| | ||||||||||||||||||||||| |||||||||||||
Sbjct 1891 ATATTTCAAAATTACTCCAATATGGTACATTTTGTTATGTTTATATACTCATTTTGGGGA 1950
Query 1090 GCAATAAAGACATCATAAATCAAA-TGAAAAGCATGCTCAAAAGATATTTTGACATGAAA 1148
|||||| ||| ||||||||||||| | |||| ||||||||||||||||||||| ||||||
Sbjct 1951 GCAATACAGATATCATAAATCAAACTAAAAA-CATGCTCAAAAGATATTTTGAAATGAAA 2009
Query 1149 GACTTGGGTCTACCAGATGTCATTTTGGGTATAAAAATCATCA-GAACTGATGAGGGCCT 1207
||||||| |||| || |||| ||||||| |||||||||||| | |||||||||| |||||
Sbjct 2010 GACTTGGATCTAGCAAATGTTATTTTGGTTATAAAAATCAT-ATGAACTGATGAAGGCCT 2068
Query 1208 TATCTTGTCTCAAACCCACTATCCTGAGAAGATACTTGATCGTTTCAAGCATTACTCAAA 1267
|| ||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||
Sbjct 2069 TACCTTGTCTCAAACCCACTATGCTGAGAAGATACTTGATCGTTTCAAGCATTCCTCAAA 2128
Query 1268 TGGGACTGAAAAAACTCCAGTAGATCCTCAAATTCACTTGACCAAAAATTCAGGTGAACC 1327
||||| || |||||||| ||||||||||||| |||||||||||||||| || ||||||||
Sbjct 2129 TGGGATTGCAAAAACTCGAGTAGATCCTCAACTTCACTTGACCAAAAACTCGGGTGAACC 2188
Query 1328 TGTGCAACAGGTGGAATATGCAAGAGTAATTGGCAGTTTAATGTACTTGACAAACAGTAC 1387
| ||||||| || |||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 2189 TATGCAACAAGTAGAATATGCAAGAGTAATTGGCAATTTAATGTACTTGACAAACAGTAC 2248
Query 1388 AAGACCGGATTTAGCGCACTCTGTAAATGTACTTAGTCGCTACACAAGTAATCCAGGACA 1447
|||||||||| ||| ||||||||||||||||||||||||||||||||| ||||||| |||
Sbjct 2249 AAGACCGGATCTAG-GCACTCTGTAAATGTACTTAGTCGCTACACAAGCAATCCAGAACA 2307
Query 1448 TAAGCATTGGAAGGCTATAACTAGAGTTTTGAACTATCTACGTTATACCAAAGATCATGG 1507
||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||
Sbjct 2308 TAAGCATTGGAAGGCTATAACTAGATTTTTGAACTACCTACGTTATACCAAAGATCATGG 2367
Query 1508 CTTGCACTATGGTAAAGAACCCGCAATTTTAGAAGGTTACAGTGATGCCAATTGGATCGC 1567
||| || ||| |||||||||||||| |||| |||||||||||||||||||| ||||||||
Sbjct 2368 CTTACATTATTGTAAAGAACCCGCAGTTTTGGAAGGTTACAGTGATGCCAACTGGATCGC 2427
Query 1568 AGACTCCAAGAACTCAAAATCCACAAGTGGATACATCTTTACACTTGGAGGTGCATCAGT 1627
||| | ||| |||| ||||||||||||||||||||||||||||||||||||| | ||||
Sbjct 2428 AGATTTCAAAAACTTTAAATCCACAAGTGGATACATCTTTACACTTGGAGGTGTAGCAGT 2487
Query 1628 GTCTTGGAAATCTTGTAAACAAACTGTGGCGGCCAAATCAACTATGGAATCTGAATTCAT 1687
||||||| |||||| |||||||||||| |||||||||||||||||||||||||||||
Sbjct 2488 ATCTTGGAGATCTTGCAAACAAACTGTGTTAGCCAAATCAACTATGGAATCTGAATTCAT 2547
Query 1688 TGCGTTGGATACAGCTGCAGCGGAAGCCGAATGGCTCCGTAATTTCTTGGAAGATATCCC 1747
||||| |||||| || |||||||| |||||||||| ||||||||| ||||| |||||
Sbjct 2548 AGCGTTCGATACAACTATAGCGGAAGACGAATGGCTCAATAATTTCTTAGAAGACATCCC 2607
Query 1748 AATGTGGGGGAAACATGTGCCTGCAATACGTGTACACTGTGATAGCCAATC-GTCTATAG 1806
|||||||||||||| |||||| |||||||||| |||| ||||||||||| | ||||||
Sbjct 2608 AATGTGGGGGAAACCTGTGCCCACAATACGTGTGCACTTTGATAGCCAATTAG-CTATAG 2666
Query 1807 GCAGGGCACGAAGTACCCTATATAATGGTAAATCTCGTCACATAAGACGACGACATAAAA 1866
||||||||| |||||||||||||||| |||||||| ||||||| ||||||||||||||||
Sbjct 2667 GCAGGGCACAAAGTACCCTATATAATCGTAAATCTTGTCACATCAGACGACGACATAAAA 2726
Query 1867 CCATTAGACAACTTATCTCAACTAGAGTAATCACGATTGATTACATCAGGTCAGCAGACA 1926
| ||| ||||||||||||||||| ||||||||||||| |||||||||| |||||| ||||
Sbjct 2727 CTATTTGACAACTTATCTCAACTTGAGTAATCACGATCGATTACATCAAGTCAGCTGACA 2786
Query 1927 ACCTAGCGGATCCATTTACAAAAGGTTTGACA-CGAGATCAAGTTGCGAGATCATCAAGA 1985
|||||||||||||||||||||||||||||| | |||||||||||| | ||||||||||||
Sbjct 2787 ACCTAGCGGATCCATTTACAAAAGGTTTGA-ATCGAGATCAAGTTTCAAGATCATCAAGA 2845
Query 1986 GGAATGGGTTTAAAGCCTATGACTTAAGAGGAGGTTTGATGGTAACCCCACC 2037
||||||||||||||||||| || |||||||| |||||||||||||||||||
Sbjct 2846 GGAATGGGTTTAAAGCCTACCACCTAAGAGGAAGTTTGATGGTAACCCCACC 2897
Score = 222 bits (120), Expect = 9e-57
Identities = 152/168 (90%), Gaps = 0/168 (0%)
Strand=Plus/Plus
Query 1 GGGGGAAGCTTTGCTTACCAATAATTACATCCTCAACATAATACCGCATAAGGTGACTGG 60
|||||||||||||||||||| ||| ||||||||||||| ||||| ||||| ||||||
Sbjct 2 GGGGGAAGCTTTGCTTACCACTAACTACATCCTCAACAGGATACCACATAAAGTGACTAC 61
Query 61 TAAGTCACCACATGAACTTTGGAAAGGTACAGTACATTCGTACAAATACCTGAAAGTGTG 120
||||||||||||||||||| |||||| ||||||| ||||||||||||||| ||||||||
Sbjct 62 AAAGTCACCACATGAACTTTAGAAAGGCACAGTACCTTCGTACAAATACCTAAAAGTGTG 121
Query 121 GGGGTGCCTAGCAAAAGTGGCTGTACCACCTCCTAAAAAAGTCACAAT 168
|||||||||||||||||||| |||||||||||| ||||| ||||||||
Sbjct 122 GGGGTGCCTAGCAAAAGTGGTTGTACCACCTCCCAAAAAGGTCACAAT 169
> AT5G35052.1 | Symbols: | transposable element gene | chr5:13315155-13318790
REVERSE LENGTH=3636
Length=3636
Score = 2194 bits (1188), Expect = 0.0
Identities = 1629/1834 (89%), Gaps = 62/1834 (3%)
Strand=Plus/Plus
Query 1 GGGGG-AAGCTTTGCTTACCAATAATTACATCCTCAACATAATACCGCATAAGGTGACTG 59
||||| || |||||||||||| ||| |||||||| || | ||||| |||||||||||||
Sbjct 1561 GGGGGAAAACTTTGCTTACCACTAACTACATCCTTAATAGGATACCACATAAGGTGACTG 1620
Query 60 GTAAGTCACCACATGAACTTTGGAAAGGTACAGTACATTCGTACAAATACCTGAAAGTGT 119
|||||||||||| ||||||||||||||||||||| |||||||||||||| |||||||
Sbjct 1621 CAAAGTCACCACATTAACTTTGGAAAGGTACAGTACCCTCGTACAAATACCTAAAAGTGT 1680
Query 120 GGGGGTGCCTAGCAAAAGTGGCTGTACCACCTCCTAAAAAAGTCACAATTGGTCCTAAGA 179
||||||| ||| |||||||||||||||||||||| ||||| ||||||||||| |||||||
Sbjct 1681 GGGGGTGTCTAACAAAAGTGGCTGTACCACCTCCCAAAAAGGTCACAATTGGGCCTAAGA 1740
Query 180 CCATAGACTGTATCTTCATCGGATATGCGCATAATAGTAGTGCTTATCAATTT-TTGGTT 238
| ||||||| ||||||||||||||||||||| || || |||||||||| |||| || |||
Sbjct 1741 CTATAGACTATATCTTCATCGGATATGCGCACAACAGCAGTGCTTATCGATTTCTT-GTT 1799
Query 239 CACAAATCAGATATTCCAGATAT-CA-GTAAATACATTTATGGAATC-AAGAAATGCATC 295
| ||||| |||||||||||||| || | ||||||| |||| ||||| ||| ||||||||
Sbjct 1800 TATAAATCGGATATTCCAGATATCCATGAAAATACAGTTATAGAATCAAAG-AATGCATC 1858
Query 296 -ATTTTTTGAAGACATTTTCCCTTGTAGGAAAGCTCAAAAACGAACTCGTGAACAACGAG 354
||||||||||| ||||| |||||||||||| ||||||||||||||||||| |||||||
Sbjct 1859 GTTTTTTTGAAGATATTTTTCCTTGTAGGAAAACTCAAAAACGAACTCGTGATCAACGAG 1918
Query 355 ATGCAGCAATC-TCAGAAGCTGAGGAC-AATACT-TCG--GGTACTATTAC-TG---TTG 405
||||||||| | | | |||| || | |||| | | | || | || || ||
Sbjct 1919 ATGCAGCAACCTTGA-AAGC----CACTATTACTGTTGAAGAAAC-AAAACATGAACCTG 1972
Query 406 AAG-A-AA-C-A---GAACCAAAAGAGCTCGCAAAGAGAAATCTTTCGGTGATGACTTCT 458
||| | || | | | | |||||||||||||||||||||||||||||||||||| ||||
Sbjct 1973 AAGAACAACCTAGGCGGAGCAAAAGAGCTCGCAAAGAGAAATCTTTCGGTGATGATTTCT 2032
Query 459 TGATGGCGTTTCTAGCTGAAAACGTACCAAGAACTTATTCAGAAGCTATGTCTACACC-T 517
||||||||||| |||||||||||||||||||||||||||||||||| |||||||| || |
Sbjct 2033 TGATGGCGTTTTTAGCTGAAAACGTACCAAGAACTTATTCAGAAGCCATGTCTAC-CCGT 2091
Query 518 GATGCACCTTATTGGAAGGAAGTAGTCAATACTGAAATAGACTCTATCTTGCAACATCAT 577
|||||||||| ||||||||||| |||||||| ||||||||||||||||||| ||||||||
Sbjct 2092 GATGCACCTTTTTGGAAGGAAGCAGTCAATAATGAAATAGACTCTATCTTGAAACATCAT 2151
Query 578 ACTTACGAGATAGCAGATCTACCCCAAGGCTCTAAACCATTGGGAAGTAAATGGATTTTC 637
||||| ||||||||||||||| ||||||| |||||||||||||| |||||||||||||||
Sbjct 2152 ACTTATGAGATAGCAGATCTA-CCCAAGGTTCTAAACCATTGGGGAGTAAATGGATTTTC 2210
Query 638 A-TAATATAACGGAAAACCAATGGTGATATTGATAGGTACAAGGCTAGGCTTGTGGTGCA 696
| || || || ||||||| ||||||||||||||||||||||||||| |||||||||| ||
Sbjct 2211 ACTATTA-AAAGGAAAACAAATGGTGATATTGATAGGTACAAGGCT-GGCTTGTGGTACA 2268
Query 697 AGGATTTCGACAAAAAGAATGCTTGGAtttttttGATACCTATTCTCTTGTAACGAGAAT 756
||||||||||||||||||| | || ||||| |||||||||||||||| |||||||||||
Sbjct 2269 AGGATTTCGACAAAAAGAAGGTTTAGATTTCTTTGATACCTATTCTCCGGTAACGAGAAT 2328
Query 757 AACTTCAATCAGGATGCTCATAGGCATTGCTGCCTTACGAGATCTTGAAATCCATCAAAT 816
|||||||||||||||||||||||| ||||| |||||||||||||||||||| ||||||||
Sbjct 2329 AACTTCAATCAGGATGCTCATAGGTATTGCAGCCTTACGAGATCTTGAAATACATCAAAT 2388
Query 817 GGATGT---A---AAAACT-GCCTTTC-TCCATGGAGATTTGGAAGAGGAAATCTACATG 868
|||||| | |||| | | ||||| | |||||||||| |||||||||||||||||||
Sbjct 2389 GGATGTAGGATGTAAAAATAG-CTTTCTTGCATGGAGATTCGGAAGAGGAAATCTACATG 2447
Query 869 AAACAACCTGAAGGGTTTGTTA-TCCTAGGACAAGAACACAAAGTGTGTAAACTTGTGAA 927
||||||||||||| |||||||| ||| |||||||||||||||||||||||||||||||||
Sbjct 2448 AAACAACCTGAAGAGTTTGTTATTCC-AGGACAAGAACACAAAGTGTGTAAACTTGTGAA 2506
Query 928 GTCATTATATGGACTCAAACAGGCTCCTAAGCAGTGGCATGAGAAGTTTGATAATGTGAT 987
|||| |||| |||||||||||||||||||| ||||||||||||||||||| | ||| ||
Sbjct 2507 GTCACTATACAGACTCAAACAGGCTCCTAAGTAGTGGCATGAGAAGTTTGACAGTGTTAT 2566
Query 988 GATGTCTAATGGCTTTAGCATTAATCAATGTGACAAATGCATATATTTCAAAATTACTCC 1047
||||||||||| |||| ||||||| ||||||||||||||||||||||| ||||||||||
Sbjct 2567 AATGTCTAATGGTTTTACCATTAATGAATGTGACAAATGCATATATTTCCAAATTACTCC 2626
Query 1048 AACAGGGTACATTTTGTTATG----T-T-T-----ATATGCTCATTTTGGGGAGCAATAA 1096
||| ||||||||||||||||| | | | |||||||||| || |||||||| |
Sbjct 2627 AACGGGGTACATTTTGTTATGTTTATATGTAGACGATATGCTCATCTTCGGGAGCAACAC 2686
Query 1097 AGACATCATAAATCAAA-TGAAAAGCATGCTCAAAAGATATTTTGACATGAAAGACTTGG 1155
||| ||||||||||||| | |||| ||||||||||||||||||||| ||||||||| |||
Sbjct 2687 AGATATCATAAATCAAACT-AAAAACATGCTCAAAAGATATTTTGAAATGAAAGACATGG 2745
Query 1156 GTCTACCAGATGTCATTTTGGGTATAAAAATCATCAGAACTGATGAGGGCCTTATCTTGT 1215
|| || ||||||| |||||||||||||||||||| ||||||||||| ||| ||| |||||
Sbjct 2746 GTATAGCAGATGTTATTTTGGGTATAAAAATCATTAGAACTGATGAAGGCATTACCTTGT 2805
Query 1216 CTCAAACCCACTATCCTGAGAAGATACTTGATCGTTTCAAGCATTACTCAAATGGGACTG 1275
|||||||||| ||| ||||||||||||||||||||||||||||||| || ||||||||||
Sbjct 2806 CTCAAACCCATTATGCTGAGAAGATACTTGATCGTTTCAAGCATTATTCTAATGGGACTG 2865
Query 1276 AAAAAACTCCAGTAGATCCTCAAATTCACTTGACCAAAAATTCAGGTGAACCTGTGCAAC 1335
|||||||||||||||||||||| |||||||||||||||| || ||||||||||||||||
Sbjct 2866 CAAAAACTCCAGTAGATCCTCAACTTCACTTGACCAAAAACTCTGGTGAACCTGTGCAAC 2925
Query 1336 AGGTGGAATATGCAAGAGTAATTGGCAGTTTAATGTACTTGACAAACAGTACAAGACCGG 1395
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
Sbjct 2926 AGGTGGAATATGCAAGAGTAATTGACAGTTTAATGTACTTGACAAACAGTACAAGACCAG 2985
Query 1396 ATTTAGCGCACTCTGTAAATGTACTTAGTCGCTACACAAGTAATCCAGGACATAAGCATT 1455
|||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 2986 ATTTAGCGCACTCTATAAATGTACTTAGTCGCTACACAAGCAATCCAGGACATAAGCATT 3045
Query 1456 GGAAGGCTATAACTAGAGTTTTGAACTATCTACGTTATACCAAAGATCATGGCTTGCACT 1515
|||||||||||||||||| ||||||||| ||| ||||||||||||| |||||||||||||
Sbjct 3046 GGAAGGCTATAACTAGAGCTTTGAACTACCTATGTTATACCAAAGACCATGGCTTGCACT 3105
Query 1516 ATGGTAAAGAACCCGCAATTTTAGAAGGTTACAGTGATGCCAATTGGATCGCAGACTCCA 1575
||||||||||||||||| |||| |||||||||||||||||||| ||||||||||| ||||
Sbjct 3106 ATGGTAAAGAACCCGCATTTTTGGAAGGTTACAGTGATGCCAACTGGATCGCAGATTCCA 3165
Query 1576 AGAACTCAAAATCCACAAGTGGATACATCTTTACACTTGGAGGTGCATCAGTGTCTTGGA 1635
| ||||| || |||||||||||||||||||||||||||||||||||| ||| || ||||
Sbjct 3166 ACAACTCTAAGTCCACAAGTGGATACATCTTTACACTTGGAGGTGCAGGAGTATCCTGGA 3225
Query 1636 AATCTTGTAAACAAACTGTGGCGGCCAAATCAACTATGGAATCTGAATTCATTGCGTTGG 1695
||||| | || ||||||||||| |||||||||||||||||||| |||||||| || ||||
Sbjct 3226 AATCTAGCAACCAAACTGTGGCAGCCAAATCAACTATGGAATCGGAATTCATAGCATTGG 3285
Query 1696 ATACAGCTGCAGCGGAAGCCGAATGGCTCCGTAATTTCTTGGAAGATAT-CCCAATGTGG 1754
||||| ||||||||||||| |||||||| ||||||||||||||||| || |||| |||||
Sbjct 3286 ATACAACTGCAGCGGAAGCTGAATGGCTTCGTAATTTCTTGGAAGACATTCCCA-TGTGG 3344
Query 1755 GGGAAACATGTGCCTGCAATACGTGTACACTGTG 1788
||||||| ||||||||||||||||||||| ||||
Sbjct 3345 GGGAAACCTGTGCCTGCAATACGTGTACATTGTG 3378
Score = 243 bits (131), Expect = 7e-63
Identities = 165/181 (91%), Gaps = 4/181 (2%)
Strand=Plus/Plus
Query 1837 AATCTCGTCACATAAGACGACGACATAAAACCATTAGACAACTTATCTCAACTAGAGTAA 1896
||||||||||||| ||||||||||||||||||||| ||||||||||||||||| |||||
Sbjct 3453 AATCTCGTCACATCAGACGACGACATAAAACCATTCGACAACTTATCTCAACTGGAGTAG 3512
Query 1897 TCACGATTGATTACATC-AGGTCAGCAGACAACCTAGCGGATCCATTTACAAAAGGTTTG 1955
||||||| ||||||||| ||| |||| |||||||||||||||||||||||||||||||||
Sbjct 3513 TCACGATCGATTACATCAAGG-CAGCTGACAACCTAGCGGATCCATTTACAAAAGGTTTG 3571
Query 1956 ACA-CGAGATCAAGTTGCGAGATCATCAAGAGGAATGGGTTTAAAGCCTATGACTTAAGA 2014
| | ||| || ||||||| ||||||||||||||||||||||||||||||| || |||||
Sbjct 3572 A-ATCGAAATAAAGTTGCAAGATCATCAAGAGGAATGGGTTTAAAGCCTACCACCTAAGA 3630
Query 2015 G 2015
|
Sbjct 3631 G 3631
> AT3G42186.1 | Symbols: | transposable element gene | chr3:14356952-14359522
REVERSE LENGTH=2571
Length=2571
Score = 2028 bits (1098), Expect = 0.0
Identities = 1480/1659 (89%), Gaps = 48/1659 (3%)
Strand=Plus/Plus
Query 418 CAAAAGAGCTCGCAAAGAGAAATCTTTCGGTGATGACTTCTTGATGGCGTTTCTAGCTGA 477
|||||||||||||||||||| |||||||||||||| ||||||||| |||| |||||||
Sbjct 897 CAAAAGAGCTCGCAAAGAGAGATCTTTCGGTGATGGTTTCTTGATGATGTTTTTAGCTGA 956
Query 478 AAACGTACCAAGAACTTATTCAGAAGCTATGTCTACACCTGATGCACCTTATTGGAAGGA 537
|||||||||||||||||||| |||||| |||||||| ||||||||||||| |||||||||
Sbjct 957 AAACGTACCAAGAACTTATTTAGAAGCCATGTCTACCCCTGATGCACCTTGTTGGAAGGA 1016
Query 538 AGTAGTCAATACTGAAATAGACTCTATCTTGCAACATCATACTTACGAGATAGCAGATCT 597
|| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 1017 AGCAGTCAATACTGAAATAGACTCTATCTTGCAACATCATACTTACGAGATATCAGATCT 1076
Query 598 ACCCCAAGGCTCTAAACCATTGGGAAGTAAATGGATTTTCA-TAATATAACGG-AAAACC 655
||| ||||| |||||||||||||| |||||||||||||||| || || || || |||||
Sbjct 1077 ACCACAAGGTTCTAAACCATTGGGGAGTAAATGGATTTTCACTATTA-AAAGGAAAAACG 1135
Query 656 AATGGTGATATTGATAGGTAC--A---A--------G------GCTAGGCTTGTGGTGCA 696
||||||||||||||||||||| | | | |||||||||||||| ||
Sbjct 1136 AATGGTGATATTGATAGGTACAAAGCTAGGCTTGTGGTACAAAGCTAGGCTTGTGGTACA 1195
Query 697 AGGATTTCGACAAAAAGAATGCTTGGAtttttttGATACCTATTCTCTTGTAACGAGAAT 756
||||||| |||||| |||| | || ||||| |||||||||||||||| |||||||||||
Sbjct 1196 AGGATTTTGACAAAGAGAAGGTTTAGATTTCTTTGATACCTATTCTCCGGTAACGAGAAT 1255
Query 757 AACTTCAATCAGGATGCTCATAGGCATTGCTGCCTTACGAGATCTTGAAATCCATCAAAT 816
|||||||||||||||||||||||||||||| ||||||||||||| |||||| ||||||||
Sbjct 1256 AACTTCAATCAGGATGCTCATAGGCATTGCAGCCTTACGAGATCGTGAAATACATCAAAT 1315
Query 817 GGATGTAAAAACTGCCTTTCT-CCATGGAGATTTGGAAGAGGAAATCTACATGAAACAAC 875
|||||||||||| | |||| | ||||||||||||||||||||||||||||||||||||
Sbjct 1316 GGATGTAAAAACAG-CTTTTTAAAATGGAGATTTGGAAGAGGAAATCTACATGAAACAAC 1374
Query 876 CTGAAGGGTTTGTTAT-CCTAGGACAAGAACACAAAGTGTGTAAACTTGTGAAGTCATTA 934
|||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||
Sbjct 1375 CTGAAGGGTTTGTTATACC-AGGACAAGAACACAAAGTGTGTAAACTTGTGAAGTCATTA 1433
Query 935 TATGGACTCAAACAGGCTCCTAAGCAGTGGCATGAGAAGTTTGATAATGTGATGATGTCT 994
|| |||||||||| ||||||||||||| |||||||||||||||| | ||| |||||||||
Sbjct 1434 TAGGGACTCAAACTGGCTCCTAAGCAGCGGCATGAGAAGTTTGACAGTGTTATGATGTCT 1493
Query 995 AATGGCTTTAGCATTAATCAATGTGACAAATGCATATATTTCAAAATTACTCCAACAGGG 1054
||||| |||| ||||||| |||||||||||| |||||||||||| |||||||||| |||
Sbjct 1494 AATGGTTTTACCATTAATGAATGTGACAAATACATATATTTCAATATTACTCCAAGAGGA 1553
Query 1055 TACATTTTGTTATG----T-T-T-----ATATGCTCATTTTGGGGAGCAATAAAGACATC 1103
|||||||||||||| | | | |||||||||| |||| |||||| | ||| |||
Sbjct 1554 TACATTTTGTTATGTTTATATGTAGACGATATGCTCATCTTGGAGAGCAACACAGATATC 1613
Query 1104 ATAAATCAAA-TGAAAAGCATGCTCAAAAGATATTTTGACATGAAAGACTTGGGTCTACC 1162
|||||||||| | |||| ||||||||||||||||||| | |||| |||| ||| |||| |
Sbjct 1614 ATAAATCAAACT-AAAAACATGCTCAAAAGATATTTTTAAATGACAGACATGGATCTAGC 1672
Query 1163 AGATGTCATTTTGGGTATAAAAATCATCAGAACTGATGAGGGCCTT-ATCTTGTCTCAAA 1221
|||||| || |||||| | ||||||||||| ||| |||| |||||| || ||||||||||
Sbjct 1673 AGATGTTATGTTGGGT-TTAAAATCATCAGTACTAATGAAGGCCTTAAT-TTGTCTCAAA 1730
Query 1222 CCCACTATCCTGAGAAGATACTTGATCGTTTCAAGCATTACTCAAATGGGACTGA-AAAA 1280
|||||||| ||| ||||||||||||||||||||||||||||| ||||||||| | ||||
Sbjct 1731 CCCACTATGTTGAAAAGATACTTGATCGTTTCAAGCATTACTCTAATGGGACT-ACAAAA 1789
Query 1281 ACTCCAGTAGATCCTCAAATTCACTTGACCAAAAATTCAGGTGAACCTGTGCAACAGGTG 1340
| |||||||||||||||| |||||||||||||||| || |||||| |||||||||| ||
Sbjct 1790 ATTCCAGTAGATCCTCAACTTCACTTGACCAAAAACTCTTGTGAACATGTGCAACAGATG 1849
Query 1341 GAATATGCAAGAGTAATTGGCAGTTTAATGTACTTGACAAACAGTACAAGACCGGATTTA 1400
||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||
Sbjct 1850 GAATATGCAAGAGTAATTGACAGCTTAATGTACTTGACAAACAGTACAAGACCGGATTTA 1909
Query 1401 GCGCACTCTGTAAATGTACTTAGTCGCTACACAAGTAATCCAGGACATAAGCATTGGAAG 1460
|||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 1910 GCGCACTCAGTAAATGTACTTAGTCGCTACACAAGCAATCCAGGACATAAGCATTGGAAG 1969
Query 1461 GCTATAACTAGAGTTTTGAACTATCTACGTTATACCAAAGATCATGGCTTGCACTATGGT 1520
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1970 GCTATAACTAGAGTTTTGAACTAACTACGTTATACCAAAGATCATGGCTTGCACTATGGT 2029
Query 1521 AAAGAACCCGCAATTTTAGAAGGTTACAGTGATGCCAATTGGATCGCAGACTCCAAGAAC 1580
|||||||||||| ||||||||||||| ||||||||||| ||||||||||| ||||| |||
Sbjct 2030 AAAGAACCCGCAGTTTTAGAAGGTTATAGTGATGCCAACTGGATCGCAGATTCCAAAAAC 2089
Query 1581 TCAAAATCCACAAGTGGATACATCTTTACACTTGGAGGTGCATCAGTGTCTTGGAAATCT 1640
| |||||||||| |||||| ||||||||||||||||||||| |||| || | |||||||
Sbjct 2090 TTTAAATCCACAATTGGATATATCTTTACACTTGGAGGTGCAGCAGTATCCTCGAAATCT 2149
Query 1641 TGTAAACAAACTGTGGCGGCCAAATCAACTATGGAATCTGAATTCATTGCGTTGGATACA 1700
| ||| ||| |||||| || |||||||||||||||||||||||||| | ||||||||||
Sbjct 2150 AGCAAAAAAATTGTGGCAGCGAAATCAACTATGGAATCTGAATTCATAGAGTTGGATACA 2209
Query 1701 GCTGCAGCGGAAGCCGAATGGCTCCGTAATTTCTTGGAAGATATCCCAATGTGGGGGAAA 1760
|||||||||||||| ||||||||| ||||||||||||||| || |||||||||||||||
Sbjct 2210 ACTGCAGCGGAAGCCAAATGGCTCCATAATTTCTTGGAAGACATTCCAATGTGGGGGAAA 2269
Query 1761 CATGTGCCTGCAATACGTGTACACTGTGATAGCCAATCGTCTATAGGCAGGGCACGAAGT 1820
| |||||||||||||||||||||||||||||||||||| ||||||| | ||||| ||||
Sbjct 2270 CCTGTGCCTGCAATACGTGTACACTGTGATAGCCAATCAACTATAGGTAAGGCACAAAGT 2329
Query 1821 ACCCTATATAATGGTAAATCTCGTCACATAAGA-CGACGACATAAAACCATTAGACAACT 1879
||||||||||||||||||||| ||||||| ||| | |||||||||||| ||| |||||||
Sbjct 2330 ACCCTATATAATGGTAAATCTAGTCACATCAGAAC-ACGACATAAAACTATTCGACAACT 2388
Query 1880 TATCTCAACTAGAGTAATCACGATTGATTACATCAGGTCAGCAGACAACCTAGCGGATCC 1939
|||||||||| |||||||||| || |||||||||| ||||| |||||||||||| ||||
Sbjct 2389 TATCTCAACTGGAGTAATCACAATCGATTACATCAAGTCAGTTGACAACCTAGCGAATCC 2448
Query 1940 ATTTACAAAAGGTTTGACA-CGAGATCAAGTTGCGAGATCATCAAGAGGAATGGGTTTAA 1998
||||||||||||||| | | |||||||||||||| |||||||||||||||||| ||||||
Sbjct 2449 ATTTACAAAAGGTTTAA-ATCGAGATCAAGTTGCAAGATCATCAAGAGGAATGAGTTTAA 2507
Query 1999 AGCCTATGACTTAAGAGGAGGTTTGATGGTAACCCCACC 2037
|||||| || |||||||| |||||||||||||||||||
Sbjct 2508 AGCCTACCACCTAAGAGGAAGTTTGATGGTAACCCCACC 2546
> AT2G07365.1 | Symbols: | transposable element gene | chr2:3060291-3060852
REVERSE LENGTH=562
Length=562
Score = 368 bits (199), Expect = 1e-100
Identities = 420/523 (80%), Gaps = 30/523 (6%)
Strand=Plus/Plus
Query 1497 AAAGATCATGGCTTGCACTATGGTAAAGAACCCGCAATTTTAGAAGGTTACAGTGATGCC 1556
|||| | ||||||||||||| ||||||||||| ||| |||| ||||| || || ||||||
Sbjct 56 AAAG-TTATGGCTTGCACTACGGTAAAGAACCAGCAGTTTTGGAAGGATATAGCGATGCC 114
Query 1557 AATTGGATCGCA-GACTCCAAG-AACTCAAAATCCACAAGTGGATACATCTTTACACTTG 1614
|||||||| | | || ||| || ||||| ||||||||||||||||| ||||||| || |
Sbjct 115 AATTGGATAG-ATGATTCC-AGAAACTCGAAATCCACAAGTGGATATGTCTTTACTCTAG 172
Query 1615 GAGGTGCATCAGTGTCTTGGAAATC-TTGTAAACAAACTGTGGCGGCCA-AATCAACTAT 1672
| |||||| |||| ||||||||||| | ||||||||| | || || ||||| ||
Sbjct 173 GTGGTGCAACAGTTTCTTGGAAATCACAG-AAACAAACTTTAATGG-CACGCTCAACGAT 230
Query 1673 GGAATCTGAATTCATTGCGT-T-GGATACAGCTGCAGCGGAAGCCGAATGGCTCCGTAA- 1729
||| ||||| || || || | | || | |||||| | ||||| || ||||| | ||
Sbjct 231 GGAGTCTGAGTTTATAGC-TCTAGG-CAAAGCTGCCGAAGAAGCTGATTGGCTTCAAAAC 288
Query 1730 TTTCTTGGAAGATATCCCAATGTGGGGGAAACATGTGCCTGCAATACGTGTACACTGTGA 1789
||| ||||||||||| |||||||||||||||| ||||| || ||||||||||||||||
Sbjct 289 TTT-TTGGAAGATATTCCAATGTGGGGGAAACCCGTGCCAGCTTTACGTGTACACTGTGA 347
Query 1790 TAGCCAATCGTCTATAGGCAGGGCAC-GAAGTACCCTA-TATAATGGTAAA-TCTCGTCA 1846
|| ||||| |||| | | | |||| ||| ||||| | |||||||| ||| ||||||||
Sbjct 348 AAGTTAATCGACTATTGCCCGAGCACAGAA-TACCC-ACTATAATGG-AAAGTCTCGTCA 404
Query 1847 CATAAGACGACGACATAAAACCATTAGACAACTT-ATCTCAACTAGAGTAATCACGATTG 1905
|| ||| ||||| ||||||||||||||| |||| || | | | | ||||| ||||| |
Sbjct 405 TATTAGAAGACGAAATAAAACCATTAGAC-ACTTGATTTTAGC-GGTGTAATGACGATCG 462
Query 1906 ATTACATCAGGTCAG-CAGACAACCTAGCGGATCCATTTACAAAAGGTTTGACACGAGAT 1964
||||||| | ||| | | |||||||||||||||| |||||| || |||||||||||||||
Sbjct 463 ATTACATTAAGTCGGTC-GACAACCTAGCGGATCTATTTACCAAGGGTTTGACACGAGAT 521
Query 1965 CAAGT--TGCGAGATCATCAAGAGGAATGGGTTTAAAGCCTAT 2005
||||| | | | ||||||||||||||||||||||||||||||
Sbjct 522 CAAGTGATTC-A-ATCATCAAGAGGAATGGGTTTAAAGCCTAT 562
> AT3G42433.1 | Symbols: | transposable element gene | chr3:14558641-14560743
REVERSE LENGTH=2103
Length=2103
Score = 209 bits (113), Expect = 7e-53
Identities = 151/169 (89%), Gaps = 4/169 (2%)
Strand=Plus/Plus
Query 3 GGGAAGCTTTGCTTACCAATAATTACATCCTCAACATAATACCGCATAAGGTGACTGGTA 62
|||||||||||||||||| ||| ||||||||||||| |||||| |||| ||||| |
Sbjct 40 GGGAAGCTTTGCTTACCACTAACTACATCCTCAACAGAATACCATGTAAGATGACTACAA 99
Query 63 AGTCACCACATGAACTTTGGAAAGGTACAGTACATTCGTACAAATACCTGAAAGTG-TGG 121
||||||||||||||||||||||||||||||||||||||||||||||||| ||| || |||
Sbjct 100 AGTCACCACATGAACTTTGGAAAGGTACAGTACATTCGTACAAATACCTAAAA-TGATGG 158
Query 122 GGGTGCCTAGCAAAAGTGGCTGTACCACCTCCTAAAAAAGT-CACAATT 169
|||||||||| |||||||| |||||||||||| ||||| || |||||||
Sbjct 159 GGGTGCCTAGAAAAAGTGGTTGTACCACCTCCCAAAAA-GTTCACAATT 206
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 100953295995
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5