BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg480346
Length=1441
Score E
Sequences producing significant alignments: (Bits) Value
AT2G14520.1 | Symbols: | CBS domain-containing protein with a ... 2025 0.0
AT4G33700.1 | Symbols: | CBS domain-containing protein with a ... 1166 0.0
> AT2G14520.1 | Symbols: | CBS domain-containing protein with
a domain of unknown function (DUF21) | chr2:6182193-6184648
REVERSE LENGTH=1441
Length=1441
Score = 2025 bits (1096), Expect = 0.0
Identities = 1342/1454 (92%), Gaps = 44/1454 (3%)
Strand=Plus/Plus
Query 1 ATGGCGGTGGAATATGAATGTTGCGGGA-CGGACTTCTTTATACATATCGGTGTGATAGT 59
|||||||||||||||||||| ||||||| | | |||||| ||||| |||| |||||||||
Sbjct 1 ATGGCGGTGGAATATGAATGCTGCGGGACCAG-CTTCTTCATACACATCGCTGTGATAGT 59
Query 60 GTTACTAGTGTTGTTCGCTGGACTAATGTCCGGTCTTACTTTGGGTCTTATGTCTATGAG 119
||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 60 GTTACTAGTCTTGTTCGCTGGACTAATGTCTGGTCTTACTTTGGGTCTTATGTCTATGAG 119
Query 120 TCTCGTTGATCTTGAAGTTCTTACTAAATCCGGTACACCCAGAGATCGTCTTCATGCTGA 179
||||||||||||||| |||||| ||||||||||||| |||||||||||| | |||||||
Sbjct 120 TCTCGTTGATCTTGAGGTTCTTGCTAAATCCGGTACTCCCAGAGATCGTATCCATGCTGC 179
Query 180 AAAGATATTGCCGGTTGTGAAAAATCAGCATCTTTTGCTTTGTACTTTACTGATATGTAA 239
|||||| || || |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 180 AAAGATTTTACCAGTTGTGAAAAATCAGCATCTTTTGCTTTGTACTTTACTGATATGTAA 239
Query 240 TGCAGCTGCTATGGAGACGCTTCCTATATTCCTTGATGCTCTTGTGACGGCTTGGGGTGC 299
|||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||
Sbjct 240 TGCAGCTGCTATGGAGGCGCTTCCTATATTTCTTGATGCTCTTGTGACGGCTTGGGGTGC 299
Query 300 CATTTTGATTTCAGTGACGTTAATTCTTTTCTTTGGTGAGATCATACCTCAGTCAGTTTG 359
||||||||||||||||||| |||||||| |||||||||||||||||||||||||||| ||
Sbjct 300 CATTTTGATTTCAGTGACGCTAATTCTTCTCTTTGGTGAGATCATACCTCAGTCAGTCTG 359
Query 360 TTCCCATCATGGGTTGGCGATTGGTGCAACAATGGCTCCATTTGTTCGTGTTCTAGTCTG 419
||| | |||||| || || |||||||||||| ||||||||||||||||||||||||| ||
Sbjct 360 TTCTCGTCATGGTTTAGCTATTGGTGCAACAGTGGCTCCATTTGTTCGTGTTCTAGTTTG 419
Query 420 GATCTGCTTACCAGTTGCATGGCCGATTAGTAAGCTGCTGGACTTTCTACTGGGTCATGG 479
||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||
Sbjct 420 GATCTGCTTACCAGTTGCATGGCCGATTAGTAAGCTGCTAGACTTTCTACTTGGTCATGG 479
Query 480 TCGTGTAGCCCTTTTCCGAAGAGCTGAGCTTAAAACACTTGTGGATTTGCATGGAAATGA 539
||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 480 TCGTGTAGCTCTTTTCCGAAGAGCTGAGCTGAAAACACTTGTGGATTTGCATGGAAAT-- 537
Query 540 GGCATCATTCAAATTCTTTCAGGCTGGTAAGGGTGGAGAGTTGACACATGATGAAACAAC 599
| |||||||||| |||||||| ||||||||||||||||||||
Sbjct 538 -G------------------AGGCTGGTAAAGGTGGAGAATTGACACATGATGAAACAAC 578
Query 600 AATCATTGCCGGAGCTCTTGAACTATCTGGGAAAATGGCTAAAGATGCAATGACACCAAT 659
||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 579 AATCATTGCTGGAGCTCTTGAACTATCTGAGAAAATGGCTAAAGATGCAATGACACCAAT 638
Query 660 TTCTGACACTTTTGTGATTGATATCAATGCCAAACTAGACAGGGAATTGATGAATTTGAT 719
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 639 TTCTGACACTTTTGTGATTGATATCAATGCCAAACTAGACAGGGATTTGATGAATTTGAT 698
Query 720 TCTTGAGAAAGGTCATAGCAGAGTCCCAGTATACTATGAGCAACGTACCAACATAATTGG 779
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 699 TCTTGATAAAGGTCATAGCAGAGTCCCAGTATACTATGAGCAACGTACCAACATAATTGG 758
Query 780 ACTTGTTTTGGTAAAGAACTTACTAACTATCAACCCAGATGATGAAATACAAGTCAAGAA 839
|||||||||||| ||||||||| | |||||||| |||||||| ||||||||||| || ||
Sbjct 759 ACTTGTTTTGGTGAAGAACTTATTGACTATCAATCCAGATGAAGAAATACAAGTAAAAAA 818
Query 840 TGTGACAATACGAAGGATTCCAAGAGTTCCAGAAACCTTACCGTTATATGATATATTGAA 899
|||||| |||||||| || ||||||||||||||||| |||||||||||||||||||| ||
Sbjct 819 TGTGACTATACGAAGAATCCCAAGAGTTCCAGAAACGTTACCGTTATATGATATATTAAA 878
Query 900 CGAATTCCAGAAAGGACATAGCCACATGGCTGTTGTTGTGAGACAGTGTGACAAAATCCA 959
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 879 CGAGTTCCAGAAAGGACATAGCCACATGGCTGTTGTTGTGAGACAGTGTGACAAAATCCA 938
Query 960 CCCATTACACAATAATGATGCTGCAAACGAGACTGTAAATGAAGTCAGAGTGGATGTGGA 1019
||| ||||| | ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 939 CCCGTTACAGAGTAATGATGCTGCAAACGAGACTGTAAATGAAGTCAGAGTGGATGTGGA 998
Query 1020 TAATGAGAGATCCCCACAGGAAACAAAGTTAAAGAGAAGGACATCACTT-CAGAAATGGA 1078
| |||||||||||||||||||||| |||||||||||||||| |||| || ||||||||||
Sbjct 999 TTATGAGAGATCCCCACAGGAAACGAAGTTAAAGAGAAGGAGATCA-TTACAGAAATGGA 1057
Query 1079 AGAGCTTTCCAAACCGAGCAAATTCGTTTAAAGCAGGGTCGAGGAGCAAGAGGTGGTCCA 1138
|||||||||||||||||||||||||| || ||||||||||||||||||||||||||
Sbjct 1058 AGAGCTTTCCAAACCGAGCAAATTCG-TT-----AGGGTCGAGGAGCAAGAGGTGGTCCA 1111
Query 1139 AAGATAATGATACTGACATTCTGCAACTTAACGAACATCCACTTCCAAAGCTAGATGAGG 1198
||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 1112 AAGATAATGATGCTGATATTCTGCAACTTAACGAACATCCACTTCCAAAGCTAGATGAGG 1171
Query 1199 AGGAAGATGCTGTTGGTATCATTACCATGGAAGATGTCATTGAAGAACTTTTACAGGAAG 1258
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1172 AGGAAGATGCTGTTGGTATCATTACAATGGAAGATGTCATTGAAGAACTTTTACAGGAAG 1231
Query 1259 AGATATTCGATGAGACGGATCATCATTTTGAAGACTTGTGACAG--------T-CGAGTG 1309
|||||||||||||||||||||||||||||||||||||||||||| | ||||||
Sbjct 1232 AGATATTCGATGAGACGGATCATCATTTTGAAGACTTGTGACAGGCCACAACTTCGAGTG 1291
Query 1310 CTCAATATTAGTTGTCTGGACCATATACATGGTGCTATA--CCTCAGAAGATCCAATTTC 1367
|| |||||||||||| || ||||| |||||||||||||| |||||||||||||||||||
Sbjct 1292 CTTAATATTAGTTGTTTGAACCATGTACATGGTGCTATATACCTCAGAAGATCCAATTTC 1351
Query 1368 CACTGGACAAGTTTTGCTGCGAAAGAGTCGTATATATACAAGTCAGATCATATGTCATGT 1427
|||||||||||||||| |||||||||||| | |||| | |||| ||||||||||||||||
Sbjct 1352 CACTGGACAAGTTTTGTTGCGAAAGAGTCATGTATA-A-AAGTAAGATCATATGTCATGT 1409
Query 1428 AATAACACTGCTTC 1441
||||||||||||||
Sbjct 1410 AATAACACTGCTTC 1423
> AT4G33700.1 | Symbols: | CBS domain-containing protein with
a domain of unknown function (DUF21) | chr4:16176276-16179481
REVERSE LENGTH=1839
Length=1839
Score = 1166 bits (631), Expect = 0.0
Identities = 1098/1315 (83%), Gaps = 66/1315 (5%)
Strand=Plus/Plus
Query 1 ATGGCGGTGGAATATGAATGTTGCGGGACGGACTTCTTTATACATATCGGTGTGATAGTG 60
||||||||||| |||| ||||||| | | |||||||||||||||| | |||||| |||
Sbjct 294 ATGGCGGTGGAGTATGTATGTTGCAGCCCAAACTTCTTTATACATATAGCTGTGATTGTG 353
Query 61 TTACTAGTGTTGTTCGCTGGACTAATGTCCGGTCTT-ACTTTGGGTCTTATGTCTATGAG 119
|| || || |||||||||||||| ||||| || ||| || ||||||||||||||| ||||
Sbjct 354 TTTCTTGTCTTGTTCGCTGGACTCATGTCTGG-CTTAACATTGGGTCTTATGTCTTTGAG 412
Query 120 TCTCGTTGATCTTGAAGTTCTTACTAAATCCGGTACACCCAG-AGATCGT-CTTCATGCT 177
||||||||||||||||||||| |||||||||||||| || | | ||||| | ||||
Sbjct 413 TCTCGTTGATCTTGAAGTTCTCGCTAAATCCGGTACA-CCTGAACATCGTAAAT-ATGCA 470
Query 178 GAAAAGATATTGCCGGTTGTGAAA-AATCAGCATCTT-TTGCTTTGT-ACTTTACTGATA 234
| |||||||||||| || || ||| |||||||| ||| |||| |||| |||||||| |||
Sbjct 471 GCAAAGATATTGCCAGTGGT-AAAGAATCAGCA-CTTGTTGC-TTGTCACTTTACTTATA 527
Query 235 TGTAATGCAGCTGCTATGGAGACGCTTCCTATATTCCTTGATG-CTCTTGTGACGGCTTG 293
|| ||||||||||||||||||||||||||||| || ||||||| | ||||||||||| ||
Sbjct 528 TGCAATGCAGCTGCTATGGAGACGCTTCCTATTTTTCTTGATGGC-CTTGTGACGGCATG 586
Query 294 GGGTGCCATTTTGATTTCAGTGACGTTAATTCTTTTCTTTGGTGAGATCATACCTCAGTC 353
||||||||||||||||||||| || || |||||| ||||||||||||| |||||||||||
Sbjct 587 GGGTGCCATTTTGATTTCAGTTACATTGATTCTTCTCTTTGGTGAGATTATACCTCAGTC 646
Query 354 -AGTTTGTTCCCATCATGGGTTGGCGATTGGTGCAACAATGGCTCCATTTGTTCGTGTTC 412
| ||||||| | | |||| || ||||||||||||||| ||||||| ||||| ||||| |
Sbjct 647 GA-TTTGTTCACGTTATGGTTTAGCGATTGGTGCAACAGTGGCTCCGTTTGTCCGTGTCC 705
Query 413 TAGTCTGGATCTGCTTACCAGTTGCATGGCCGATTAGTAAGCTGCTGGACTTTCTACTGG 472
|||||| ||||||||||| ||||||||||| || || ||| |||||||||||||| |||
Sbjct 706 TAGTCTTTATCTGCTTACCTGTTGCATGGCCAATAAGCAAGTTGCTGGACTTTCTATTGG 765
Query 473 GTCATGGTCGTGTAGCCCTTTTCCGAAGAGCTGAGCTTAAAACACTTGTGGATTTGCATG 532
||||| |||||| ||| ||||| |||||||||||||| ||||||||||||||||| ||||
Sbjct 766 GTCATCGTCGTGCAGCGCTTTTTCGAAGAGCTGAGCTGAAAACACTTGTGGATTTTCATG 825
Query 533 GAAATGAGGCATCATTCAAATTCTTTCAGGCTGGTAAGGGTGGAGAGTTGACACATGATG 592
|||||||||| | ||| || | | ||| | || ||||| ||||| |
Sbjct 826 GAAATGAGGC-TGG---AAA--------GG--G-T--GGG-G-AG--TTGACTCATGACG 864
Query 593 AAACAACAATCATTGCCGGAGCTCTTGAACTATCTGGGAAAATGG-CTAAAGATGCAATG 651
|||| ||||||||||| |||||||||||||| |||| |||||||| | ||||||||||||
Sbjct 865 AAACGACAATCATTGCAGGAGCTCTTGAACTCTCTGAGAAAATGGTC-AAAGATGCAATG 923
Query 652 ACACCAATTTCTGACA-CTTTTGTGATTGATATCAATGCCAAACTAGACAGGGAATTGAT 710
|||||||| || || | |||| ||||||||||||||||||||||||||||| || |||||
Sbjct 924 ACACCAATATCGGATATCTTT-GTGATTGATATCAATGCCAAACTAGACAGAGACTTGAT 982
Query 711 GAATTTGATTCTTGAGAAAGGTCATAGCAGAGTCCCAGTATACTATGAGCAACGTACCAA 770
||| ||||||||||||||||| ||||||||||| ||||||||||||||||| | || ||
Sbjct 983 GAACTTGATTCTTGAGAAAGGGCATAGCAGAGTTCCAGTATACTATGAGCAGCCAACTAA 1042
Query 771 CATAATTGGACTTGTTTTGGTAAAGAACTTACTAACTATCAACCCAGATGATGAAATACA 830
|||||| || |||||| |||| ||||||||| ||||||||||||||||||| |||||||
Sbjct 1043 CATAATCGGCCTTGTTCTGGTGAAGAACTTATTAACTATCAACCCAGATGAAGAAATACC 1102
Query 831 AGTCAAGAATGTGACAATACGAAGGATTCCAAGAGTTCCAGAAACCTTACCGTTATATGA 890
||||||||||| || ||| |||||||||||||||||||||||| ||| || ||||||||
Sbjct 1103 TGTCAAGAATGTCACGATAAGAAGGATTCCAAGAGTTCCAGAAATCTTGCCTTTATATGA 1162
Query 891 TATATTGAACGAATTCCAGAAAGGACAT-AGCCACATGGCTGTTGTTGTGAGACAGTGTG 949
||||||||||||||||||||||||| | |||||||||||||||||||| ||||||||||
Sbjct 1163 CATATTGAACGAATTCCAGAAAGGAC-TCAGCCACATGGCTGTTGTTGTAAGACAGTGTG 1221
Query 950 ACAAAATCCACCCATTACACAATAATGATGCTGCAAACGAGACTGTAAATGAAGTCAGAG 1009
|||||||||||||||||| | | | || ||| | || ||| || |||| | |||
Sbjct 1222 ACAAAATCCACCCATTAC-C--T--T----CTAAAAATGGGAGTGTTAAGGAAGCCCGAG 1272
Query 1010 TGGATGTGGATAATGAGAGA--TCC--C-CA-CAGGAAACAAAGTTAAAGAGAAGGACAT 1063
|||||||||||| |||| || ||| | | ||||| | || ||||| || || | ||
Sbjct 1273 TGGATGTGGATAGTGAGGGAACTCCTACTCCTCAGGAGAGAATGTTAAGGACAAAAAGAT 1332
Query 1064 CACTTCAGAAA-TGGAAGAGCTTTCCAAACCGAGCAAATTCGTTTAAAGCAGGGTCGAGG 1122
| ||||| ||| |||||||||||||| || ||||||| ||||||||||| |||||| | |
Sbjct 1333 CGCTTCA-AAAGTGGAAGAGCTTTCCGAATCGAGCAAGTTCGTTTAAAGGAGGGTCAAAG 1391
Query 1123 AGCAAGAGGTGGTCCAAAGATAATGATACTGACATTCTGCAACTT-AACGAACA-TCCAC 1180
||||||| |||||| ||||| |||||| | ||||| |||||| || || | || ||| |
Sbjct 1392 AGCAAGAAGTGGTCAAAAGACAATGATGCAGACATCCTGCAA-TTGAATGG-CAATCCGC 1449
Query 1181 TTCC-AAAGCTAGATGAGGAGGAAGATGCTGTTGGTATCATTACCATGGAAGATGTCATT 1239
| || ||| || | |||||| ||||| || || || |||||||| ||||| |||||||||
Sbjct 1450 TGCCTAAA-CTTGCTGAGGAAGAAGAAGCAGTCGGAATCATTACGATGGAGGATGTCATT 1508
Query 1240 GAAGAACTTTTACAGGAAGAGATATTCGATGAGACGGATCATCATTTTGAAGACT 1294
||||||||| | ||||| ||||| || || || || ||||| |||||||||||||
Sbjct 1509 GAAGAACTTCTGCAGGAGGAGATCTTTGACGAAACTGATCACCATTTTGAAGACT 1563
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 71033771175
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5