BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg480347 Length=1509 Score E Sequences producing significant alignments: (Bits) Value AT2G14530.1 | Symbols: TBL13 | TRICHOME BIREFRINGENCE-LIKE 13 |... 2194 0.0 > AT2G14530.1 | Symbols: TBL13 | TRICHOME BIREFRINGENCE-LIKE 13 | chr2:6187421-6190380 FORWARD LENGTH=1545 Length=1545 Score = 2194 bits (1188), Expect = 0.0 Identities = 1396/1495 (93%), Gaps = 20/1495 (1%) Strand=Plus/Plus Query 1 CCAAAATCTCCGCCATGGCTAAGAGCTTCT--GAGAG----AGCCATGGCTACGATTTCA 54 |||||||||||||||||||| ||||||||| ||||| |||||||||||| | |||| Sbjct 19 CCAAAATCTCCGCCATGGCTGAGAGCTTCTGAGAGAGACACAGCCATGGCTACAACTTCA 78 Query 55 CCCAACAAActctcaatcttccctctactctcccttctctgtttcatctccattttcttc 114 | |||||||| |||| ||||||||||||||||||||||||||||||||||||||||| || Sbjct 79 CACAACAAACCCTCACTCTTCCCTCTACTCTCCCTTCTCTGTTTCATCTCCATTTTCCTC 138 Query 115 ctcctctctctatccaaacgcgcttctctctcctctccCAACACTCACCGCTCCGCCACC 174 |||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| Sbjct 139 CTCCTCTCTCTATCCAAACGCGCTTCCCTCTCCTCTCCCAAAACTCACCGCTCCGCCACC 198 Query 175 GTCTTCCCTCCAAAATCCGACGGTTCCCTCTCACCTCTCTCCGCCACTTGCGACTTCTCC 234 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 199 GTCTTCCCTCCAAAACCCGACGGTTCCCTCTCACCTCTCTCCGCCACTTGCGACTTCTCC 258 Query 235 GACGGCTCATGGATCTACGACCCCAACCCCAGATCCACCAGGTACACTAGTAATTGTAAA 294 || ||||| |||||||||||||||||||||||||||||||||||||| |||| ||||||| Sbjct 259 GAAGGCTCCTGGATCTACGACCCCAACCCCAGATCCACCAGGTACACCAGTAGTTGTAAA 318 Query 295 GAGATCTTCAAAGGATGGAATTGCATTCGTAACAACAAAACCAATGGTCTCGAGATCTCT 354 || |||||||||||||||||||| |||||||||||||||||||||||| ||||||| ||| Sbjct 319 GAAATCTTCAAAGGATGGAATTGTATTCGTAACAACAAAACCAATGGTTTCGAGATATCT 378 Query 355 AAATGGCGATGGAAGCCTAAGGACTGTGATCTTCCTTCGTTTGATCCACTCAAATTTCTT 414 || ||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| Sbjct 379 AATTGGCGATGGAAACCTAAACACTGTGATCTTCCTTCGTTTGATCCACTCAAATTTCTT 438 Query 415 CAGACTCATCGAAATACCAACATCGGATTTGTGGGTGATTCATTGAATAGGAACATGTTT 474 ||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 439 CAGTCTCATCGCAATACCAACATCGGATTTGTGGGTGATTCATTGAATAGGAACATGTTT 498 Query 475 GTATCTTTATTCTGTATGTTAAAGAGTGTGACGGGTGAACTGAAGAAGTGGCGACCAGCG 534 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||| || Sbjct 499 GTATCTTTATTCTGTATGTTAAAGAGTGTGACGGGTGAATTGAAGAAGTGGCGACCTGCC 558 Query 535 GGTGCAGATCGCGGATTTACGTTTTTGCAGTATAATCTGACTATAGCGTATCATCGAACA 594 ||||||||||||||||| ||||||| |||||||||| ||||||| ||||||||||||||| Sbjct 559 GGTGCAGATCGCGGATTCACGTTTTCGCAGTATAATTTGACTATCGCGTATCATCGAACA 618 Query 595 AATCTCTTGGCTCGTTATGGTAGGTGGTCAGCTAATGCCAATGGTGGTGAGTTAGAATCT 654 ||||| ||||||||||||||||| |||||||| ||||| || |||||||||||||||||| Sbjct 619 AATCTATTGGCTCGTTATGGTAGATGGTCAGCCAATGCTAAGGGTGGTGAGTTAGAATCT 678 Query 655 CTTGGATTTAAAGAGGGCTATAGAGTTGATGTCGATATTCCAGACAGCTCATGGGAAAAG 714 |||||||||||||||||||||||||||||||| ||||||||||||||||| |||| ||| Sbjct 679 CTTGGATTTAAAGAGGGCTATAGAGTTGATGTTGATATTCCAGACAGCTCGTGGGCGAAG 738 Query 715 GCTTCGAGTTTCCATGACATTCTCATTTTAAACACTGGGCATTGGTGGTGGGCGCCATCA 774 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 739 GCTTCGAGTTTCCATGACATTCTCATTTTGAACACTGGGCATTGGTGGTGGGCGCCATCA 798 Query 775 AAATTTGACCCTCTAAAATCTCCTATGCTATTCTTTGAAGGTGGCCGGCCAATACTTCCA 834 |||||||||||| |||||||||||||||| ||||||||||| || ||||||||||||||| Sbjct 799 AAATTTGACCCTGTAAAATCTCCTATGCTTTTCTTTGAAGGCGGTCGGCCAATACTTCCA 858 Query 835 CCAATACCTCCTGCTGCTGGCCTGGATCGGGTTCTAAACAATATGGTAAATTTTGTGGAG 894 || |||||||||||| ||||||| || ||||||||||||||||||||||||||||||||| Sbjct 859 CCTATACCTCCTGCTACTGGCCTAGACCGGGTTCTAAACAATATGGTAAATTTTGTGGAG 918 Query 895 AAAACAAAGCGACCTGGAGGGATCATATTCTTCCGAACACAATCACCTAGGCACTTTGAA 954 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 919 AAAACAAAGCGACCTGGAGGGATCATATTCTTCCGGACACAATCACCTAGGCACTTTGAA 978 Query 955 GGAGGTGACTGGAACCAAGGTGGTACTTGTCAAAGACTGCAACCTTTGTTACCTGGACAA 1014 |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| || Sbjct 979 GGAGGTGACTGGGACCAAGGTGGTACTTGTCAACGACTGCAACCTTTGTTACCTGGAAAA 1038 Query 1015 GTTGAAGAATTGTTCTCAGTGGGGAACAACGGAACAAATGTAGAGGTTCGTCTGGTGAAT 1074 ||||| ||||| ||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 1039 GTTGAGGAATTTTTCTCAGTGGGGAACAACGGAACAAATGTAGAGGTTCGTCTCGTGAAT 1098 Query 1075 CAACACCTCTATAACTCCCTCAAGAGTAGAAGCGCCTTCCACGTTTTGGACATAACTCGA 1134 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1099 CAACACCTCTATAACTCCCTCAAGAGTAGAAGCGCCTTCCACGTTTTGGACATAACTCGA 1158 Query 1135 ATGAGCGAGTACAGAGCTGACGCTCATCCAGCAGCAGCTGGTGGAAAGAATCACGATGAC 1194 ||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||| Sbjct 1159 ATGAGCGAGTACAGAGCCGACGCTCATCCGGCAGCAGCTGGTGGAAAGAATCACGATGAC 1218 Query 1195 TGCATGCATTGGTGCCTTCCGGGCATCACCGACACTTGGAATGATTTATTCATCGCAACT 1254 ||||||||||||||||| |||||| | |||||||||||||||||||||||| | |||||| Sbjct 1219 TGCATGCATTGGTGCCTCCCGGGCCTTACCGACACTTGGAATGATTTATTCGTTGCAACT 1278 Query 1255 CTCCATACGATCAAAGGATAAGTAACCTGAAGGAAGAATCACACCCGTCTTTATAATTGT 1314 || ||||||||||||| | ||||||||||| || ||||||||||||||| ||| || Sbjct 1279 CTTCATACGATCAAAGCTTT-GTAACCTGAAG-AA---TCACACCCGTCTTTAGAATGGT 1333 Query 1315 TTTGATTCGTTGGGTCTAGCGTCA--GTCAtttt-tttctttttGTACTCTTGTAAATTT 1371 | | || ||||||||||||||| |||||||| ||||||||||||||||||||||||| Sbjct 1334 T---ACTC-TTGGGTCTAGCGTCATAGTCATTTTATTTCTTTTTGTACTCTTGTAAATTT 1389 Query 1372 TGATGTTATCTTCTGCG-TAttttttaatttagttattttttGGTCTACAGTATGCAAAA 1430 ||||||||||||||||| | |||||| |||||||||||||||| ||||||||| ||||| Sbjct 1390 TGATGTTATCTTCTGCGATTTTTTTTTGTTTAGTTATTTTTTGGCCTACAGTATTCAAAA 1449 Query 1431 GTGTTTTAAATATTATATACACTTTTCATTTTATCTTTTT-GGTCAAACACTTTT 1484 ||||||| ||||||| || ||||||||||||||| ||||| |||||||||||||| Sbjct 1450 GTGTTTTTAATATTACATGCACTTTTCATTTTATTTTTTTTGGTCAAACACTTTT 1504 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 74447408235 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5