BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg480348
Length=1288
Score E
Sequences producing significant alignments: (Bits) Value
AT2G14540.1 | Symbols: ATSRP2, SRP2 | serpin 2 | chr2:6197663-6... 1664 0.0
AT1G62170.2 | Symbols: | Serine protease inhibitor (SERPIN) fa... 582 2e-165
AT1G64035.1 | Symbols: | pseudogene, putative serpin, blastp m... 540 1e-152
AT1G62160.1 | Symbols: | Serine protease inhibitor (SERPIN) fa... 466 2e-130
> AT2G14540.1 | Symbols: ATSRP2, SRP2 | serpin 2 | chr2:6197663-6199406
REVERSE LENGTH=1499
Length=1499
Score = 1664 bits (901), Expect = 0.0
Identities = 1142/1256 (91%), Gaps = 25/1256 (2%)
Strand=Plus/Plus
Query 1 AAA-AACCAAGAACTTAGCACATCGGAAATCACAGATCCCTCTCTCTCAAAAACGAAGAA 59
||| |||||||||||||||||||| |||| | ||||||||||||||||||| ||||| ||
Sbjct 31 AAAGAACCAAGAACTTAGCACATCAGAAACCGCAGATCCCTCTCTCTCAAAGACGAATAA 90
Query 60 AAAGCAAAAGA-TGAATATGCAAGAAGCGATGAAGAACCAAAACGACGTTTCTATGTTCC 118
||||||||||| || ||||||||||||||||||||||||||||||| |||||| |||| |
Sbjct 91 AAAGCAAAAGATTG-ATATGCAAGAAGCGATGAAGAACCAAAACGAGGTTTCTCTGTTAC 149
Query 119 TTGCAGGGAAAGTAATCTCTGCCGTCGCCAAAAACTCTAACTTTGTTTTCTCTCCGGCAT 178
||| |||||||||||||||||||| ||||||||||| |||| ||| |||||||||||||
Sbjct 150 TTGTGGGGAAAGTAATCTCTGCCGTAGCCAAAAACTCAAACTGTGTCTTCTCTCCGGCAT 209
Query 179 CGATCAACGCCGTTCTCACCATGACTGCTGCCACCTCTGACAGCAAATCATTAAAATCCT 238
| |||||||||||||||||| |||| ||||||| | | |||| |||| |||||| ||| |
Sbjct 210 CCATCAACGCCGTTCTCACCGTGACCGCTGCCAACACCGACAACAAAACATTAAGATCTT 269
Query 239 TCATCCTCTCCTTTCTTAGGTCTTCTTCCACCGAAGAGATCAACGCCATCTTCCACGAAC 298
|||||||||| ||||||| ||||||||| |||||||||| ||||||||||||||||||||
Sbjct 270 TCATCCTCTCTTTTCTTAAGTCTTCTTCTACCGAAGAGACCAACGCCATCTTCCACGAAC 329
Query 299 TCGCTTCCGTCGTCCTCAGAGACGGAAGCGAAAGAGGCGGGCCTAAAATCGCGGCGGTTA 358
|||||||||||||| ||| ||||||||| |||| ||||||||| ||||| ||||||||||
Sbjct 330 TCGCTTCCGTCGTCTTCAAAGACGGAAGTGAAACAGGCGGGCCCAAAATTGCGGCGGTTA 389
Query 359 ATGGTGTGTGGATGGAGCAATCGCTTTCGTGTAACCCCGACTGGGAAGATCTCTTTCAGA 418
|||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||
Sbjct 390 ATGGAGTGTGGATGGAGCAATCGCTTTCGTGTAACCCCGACTGGGAAGATCTGTTTCTGA 449
Query 419 AGTTGTTCAAGGCTAGTTTCACTCAAGTTGATTTCCGAAACAAGGCTGAAGAAGTGCGTG 478
| || ||||||||||||||| || |||||||||||||| ||||||||||||||||||||
Sbjct 450 ACTTCTTCAAGGCTAGTTTCGCTAAAGTTGATTTCCGACACAAGGCTGAAGAAGTGCGTC 509
Query 479 AGGAGCTTACACCAACAAATACGTGGGCTTCACGTCACACCAATGACCTCATCAAAGATC 538
||| | | |||||||||||||||||||||||||||||| |||||||||||
Sbjct 510 TGGA-CGT--------AAATACGTGGGCTTCACGTCACACCAATGATCTCATCAAAGAAA 560
Query 539 TTCTTCCTTATGGATCTGTTACAAGCCTAACTAATTGGATATATGGAAACGCATTGTACT 598
|||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 561 TTCTTCCTCGTGGATCTGTTACAAGCCTAACTAATTGGATATATGGAAACGCCTTGTACT 620
Query 599 TCAAGGGAGCTTGGGAAAAGGAATTTGATAAGTCCATGACAAAAGAGAAACCATTTCACC 658
||||||||||||||||||||| ||| |||||||||||||||| ||| |||||||||||||
Sbjct 621 TCAAGGGAGCTTGGGAAAAGGCATTCGATAAGTCCATGACAAGAGATAAACCATTTCACC 680
Query 659 TTCTCAATGACAAATCAGTCTCTGTGCCTTTCATGAGAAGCTACAAGAGGCAATTCATAG 718
||||||||| ||||||||||||||||||||||||||||||||| ||| ||||||||||
Sbjct 681 TTCTCAATGGCAAATCAGTCTCTGTGCCTTTCATGAGAAGCTATGAGAAACAATTCATAG 740
Query 719 AGGCTTATGATGGTTTCAAAGTCCTCAAG-CTTCCTTATCGACAAAGCCGTGATGATACC 777
||||||||||||||||||||||||| | | ||||||||||||||| | ||||||||||||
Sbjct 741 AGGCTTATGATGGTTTCAAAGTCCT-ACGCCTTCCTTATCGACAAGGACGTGATGATACC 799
Query 778 AACCGCAAGTTTTCCATGTATCTCTATCTCCCTGACAAGAAAGGTGAATTGGATAATCTT 837
|||||| ||||||| ||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 800 AACCGCGAGTTTTCGATGTATCTCTATCTCCCTGACAAGAAAGGTGAACTGGATAATCTT 859
Query 838 TTGGAGAGAATGACATCTACTCCTGGATTCTTGGATAGTCATATTCCGAAATACCGAGTT 897
||||||||||| ||||||| |||||||||||||||||||||||||||| ||||||| |||
Sbjct 860 TTGGAGAGAATAACATCTAATCCTGGATTCTTGGATAGTCATATTCCGGAATACCGCGTT 919
Query 898 GATGTTGGTGATTTCAGAATTCCAAAATTTAAGATCGAATTCGGTTTTGAAGCTTCAAGT 957
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 920 GATGTTGGTGATTTCAGAATTCCAAAATTTAAGATCGAATTCGGGTTTGAAGCTTCAAGT 979
Query 958 GTTTTTAATGACGTCTTTGAGCTTAAAGTGTCATTATATCAGAAAGCTTTGATTGAGATT 1017
|||||||||||| | || |||||||| ||||||||| | ||||||||||||||||||||
Sbjct 980 GTTTTTAATGAC-T-TT-GAGCTTAATGTGTCATTACACCAGAAAGCTTTGATTGAGATC 1036
Query 1018 GATGAAGAAGGTACTGAAGCTGCGGCTGCTACTGCTTTTGTCGTGTGTTTAACCGGCAGC 1077
||||||||||||||||||||||||||||||||| || |||| || || ||||||||||
Sbjct 1037 GATGAAGAAGGTACTGAAGCTGCGGCTGCTACTACTGTTGTAGTA-GT--AACCGGCAGC 1093
Query 1078 TGTGCGTTTGAGCCG--GA-GAAGATAGATTTTGTGGCAGAACATCCATTTCTCTTTTTG 1134
||| || |||||| || ||||||||||||||||||||| ||||||||||||||||||
Sbjct 1094 TGTTTGTGGGAGCCGAAGAAGAAGATAGATTTTGTGGCAGATCATCCATTTCTCTTTTTG 1153
Query 1135 ATTAGAGAAGACAAAACCGGAACTGTTTTGTTCGCTGGTCAAATCTTCGATCCTTCCGAA 1194
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||
Sbjct 1154 ATTAGAGAAGACAAAACCGGAACTCTTTTGTTCGCTGGTCAAATCTTCGATCCTTCTGAA 1213
Query 1195 GCTT-CTTCTGCATTGGACCGGCCTTAACCGGATAGGGGTTTGGTATTTTAGATTT 1249
||| ||||||| ||||||||| |||||||||||| ||||||||||||||||||||
Sbjct 1214 -CTTTCTTCTGCGTTGGACCGGGCTTAACCGGATAAGGGTTTGGTATTTTAGATTT 1268
> AT1G62170.2 | Symbols: | Serine protease inhibitor (SERPIN)
family protein | chr1:22973840-22975754 FORWARD LENGTH=1728
Length=1728
Score = 582 bits (315), Expect = 2e-165
Identities = 581/706 (82%), Gaps = 31/706 (4%)
Strand=Plus/Plus
Query 496 AATACGTGGGCTTCACGTCACACCAATGACCTCATCAAAGATCTTCTTCCTTATGGATCT 555
||| ||||||| ||| ||||||| |||| ||||||||||||||||||||| ||||||
Sbjct 745 AATGCGTGGGCATCAAGTCACACAAATGGTCTCATCAAAGATCTTCTTCCTCGTGGATCA 804
Query 556 GTTACAAGCCTAACTAATTGGATATATGGAAACGCATTGTACTTCAAGGGAGCTTGGGA- 614
|||||||||||||| | || | ||||||| ||||||||||||||| ||| | |||||
Sbjct 805 GTTACAAGCCTAACCGACAGGGTTTATGGAAGCGCATTGTACTTCAAAGGAACCTGGGAG 864
Query 615 -AAAGGAAT-TTGATAAGTCCATGAC-AAAAGAGAAACCATTTCACCTTCTCAAT-GACA 670
||| ||| | | ||||| ||||| ||| | ||||| ||| ||||||||||| || |
Sbjct 865 GAAA--AATACTCA-AAGTCAATGACGAAATG-CAAACCTTTTTACCTTCTCAATGGA-A 919
Query 671 AATCAGTCTCTGTGCCTTTCATGAGAAGCTACAAGAGGCAATTCATAGAGGCTTATGATG 730
|||||| |||||||| |||||||| |||| ||| |||| ||| | |||||||||||
Sbjct 920 CATCAGTGTCTGTGCCATTCATGAGTAGCTTTGAGAAACAATACATTGCGGCTTATGATG 979
Query 731 GTTTCAAAGTCCTCAAG-CTTCCTTATCGACAAAGCCGTGATGATACCAACCGCAAGTTT 789
|||| || || ||| || ||||||||||||||| ||||||| ||||||||||||| |||
Sbjct 980 GTTTTAAGGTACTC-AGACTTCCTTATCGACAAGGCCGTGACAATACCAACCGCAACTTT 1038
Query 790 TCCATGTATCTCTATCTCCCTGACAAGAAAGGTGAATTGGATAATCTTTTGGAGAGAATG 849
| |||||| |||||||||| ||||||||||||||||||||| |||||||||| ||||||
Sbjct 1039 GCAATGTATATCTATCTCCCGGACAAGAAAGGTGAATTGGATGATCTTTTGGAAAGAATG 1098
Query 850 ACATCTACTCCTGGATTCTTGGATAGTCATATTCC-GAAATACCGAGTTGATGTTGGTGA 908
||||||||||||||||||||||||||||| | ||| |||| | ||||| | |||||| |
Sbjct 1099 ACATCTACTCCTGGATTCTTGGATAGTCACAATCCAGAAAGAA-GAGTTAAAGTTGGTAA 1157
Query 909 TTTCAGAATTCCAAAATTTAAGATCGAATTCGGTTTTGAAGCTTCAAGTGTTTTTAATGA 968
|||||||||||||| ||||||||||||||||| |||||||||||||||| ||| | |||
Sbjct 1158 ATTCAGAATTCCAAAGTTTAAGATCGAATTCGGGTTTGAAGCTTCAAGTGCTTTCAGTGA 1217
Query 969 CGTCTTTGAGCTTAAAGTGTCATTATATCAGAAAGCTTTGATTGAGATTGATGAAGAAGG 1028
| | || |||||| | |||||||| || || ||| |||||||||| || |||||| ||||
Sbjct 1218 C-T-TT-GAGCTTGATGTGTCATTTTACCAAAAAACTTTGATTGAAATCGATGAAAAAGG 1274
Query 1029 TACTGAAGCTGCGGCTGCTACTGCTTTTGTCGTG-TGTTTAACCG-GCAGCTGTGCGTTT 1086
||| ||||||| || |||||| ||| ||| || || || | | || || |||
Sbjct 1275 TACCGAAGCTGTTACTTTTACTGCATTT--CGTTCTGCATA-CCTTG--GTTGCGC-TTT 1328
Query 1087 GAGCCGGAGAAGATAGATTTTGTGGCAGAACATCCATTTCTCTTT-TTGATTAGAGAAGA 1145
| | | || || |||||||| ||||| ||||||||||| ||| ||||||||||||||
Sbjct 1329 G-GT-GAAGCCTATTGATTTTGTAGCAGATCATCCATTTCT-TTTCTTGATTAGAGAAGA 1385
Query 1146 -CAAAACCGGAACTGTTTTGTTCGCTGGTCAAATCTTCGATCCTTC 1190
|||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1386 ACAAA-CCGGAACTGTTTTGTTCGCTGGTCAAATCTTCGATCCTTC 1430
> AT1G64035.1 | Symbols: | pseudogene, putative serpin, blastp
match of 55% identity and 1.1e-82 P-value to GP|26224736|gb|AAN76362.1||AY158152
serpin-like protein {Citrus x paradisi}
| chr1:23755496-23757736 REVERSE LENGTH=2241
Length=2241
Score = 540 bits (292), Expect = 1e-152
Identities = 579/711 (81%), Gaps = 45/711 (6%)
Strand=Plus/Plus
Query 502 TGGGC-TTCACGTCACACCAATGACCTCATCAAAGATCTTCTTCCTTATGGATCTGTTAC 560
||||| || |||||||||||||| |||||||||||||||| ||| |||||| |||||
Sbjct 1546 TGGGCATT-ACGTCACACCAATGGTATCATCAAAGATCTTCTACCTCCTGGATCCGTTAC 1604
Query 561 AAGCCTAA-CTAAT-TGGATATATGGAAACGCATTGTACTTCAAGGGAGCTTGGGAAAAG 618
|||| || || | ||||| ||||||||||||||||||||||| ||||| |||||| |
Sbjct 1605 AAGCGAAACCT--TGTGGATTTATGGAAACGCATTGTACTTCAAAGGAGCCTGGGAAGAC 1662
Query 619 GAATT-TGATAAGTCCATGACAAAAGAGAAACCATTTC-ACCTTCTCAATGACAAATC-A 675
|||| | ||||||| ||||| ||| | ||||| |||| ||||| |||||| |||| | |
Sbjct 1663 AAATTCT-ATAAGTCAATGACGAAACACAAACC-TTTCTACCTTGTCAATGGCAAA-CAA 1719
Query 676 GTCTC-TGTGCCTTTCATG-AGAAGCT-ACAAGAGGCAAT-TCATAGAGGCTTATGATGG 731
|| | |||||| |||||| | ||||| |||| || |||| | || ||||||| |||||
Sbjct 1720 GT-ACATGTGCCATTCATGCA-AAGCTCACAA-AGTCAATATGTTA-AGGCTTACGATGG 1775
Query 732 TTTCAAAGTCCTCAAG-CTTCCTTATCGACAAAGCCG-TGATGATACCAA-CCG-CAAGT 787
|||||| ||||| || | || || |||| ||| || | |||||| ||| || ||| |
Sbjct 1776 TTTCAAGGTCCT-TAGACAACCATACCGAC-AAGGCGTTAATGATA-CAAGTCGCCAA-T 1831
Query 788 TTTCCATGTAT-CTCTATCTCCCTGACAAGAAAGGTGAATTGGATAATCTTTTGGAGAGA 846
| || |||| | | ||||||||| ||| |||||| || ||||||||||||| |||||| |
Sbjct 1832 TCTCAATGTGTAC-CTATCTCCCGGACGAGAAAGATGGATTGGATAATCTTGTGGAGAAA 1890
Query 847 ATGACATCTACTCCTGGATTCTTGGATAGTCATATTCCGAAATACCGAGTTGATGTTGGT 906
|||||||||||| |||||||||||| ||||| ||||||| | ||||||| ||||||
Sbjct 1891 ATGACATCTACTGATGGATTCTTGGACAGTCACATTCCGAGTTGGAGAGTTGAAGTTGGT 1950
Query 907 GATTTCAGAATTCCAAAATTTAAGATCGAATTCGGTTTTGAAGCTTCAAGTGTTTTTAAT 966
|| |||||||||||||| |||||||| ||||||||||||||||||||||| ||||| |||
Sbjct 1951 GAATTCAGAATTCCAAAGTTTAAGATTGAATTCGGTTTTGAAGCTTCAAGCGTTTTCAAT 2010
Query 967 GACGTCTTTGAGCTTAAAGTGTCATTATATCAGAAAGCTTTGATTGAGATTGATGAAGAA 1026
|| ||||| |||| | || |||||||| || |||||| ||||||||||||||||||||
Sbjct 2011 GA---CTTTGCGCTTGATGTATCATTATACCAAAAAGCTATGATTGAGATTGATGAAGAA 2067
Query 1027 GGTACTGAAGCTGCGGCTGCTACTGCTTTTGTCGTGTGTTTAACCGGCAGCTGTGCGTT- 1085
||||||||||||||||||||||||||| | || | ||| || ||| || | | ||
Sbjct 2068 GGTACTGAAGCTGCGGCTGCTACTGCTCTAGTTG-GTGCTTGT--GGCTGCAGC-CTTTA 2123
Query 1086 TGAG-CCGGAGAAG---ATAGATTTTGTGGCAGAACATCCATTTCTCTT-TTTGATTAGA 1140
| || || ||||||||||||||||| ||||||||| | || ||| ||||||
Sbjct 2124 T-AGGCCTCCTCCTCCCATAGATTTTGTGGCAGATCATCCATTTTTTTTCTTT-ATTAGA 2181
Query 1141 GAAGACAAAACCGGAACTGTTTTGTTCGCTGGTCAAATCTTCGATCCTTCC 1191
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2182 GAAGACAAAACCGGAACTGTTTTGTTCGCTGGTCAAATCTTCGATCCTTCC 2232
> AT1G62160.1 | Symbols: | Serine protease inhibitor (SERPIN)
family protein | chr1:22972352-22973303 FORWARD LENGTH=663
Length=663
Score = 466 bits (252), Expect = 2e-130
Identities = 413/488 (85%), Gaps = 21/488 (4%)
Strand=Plus/Plus
Query 709 CAATTCATAGAGGCTTATGATGGTTTCAAAGTCCTCAAG-CTTCCTTATCGACAAAGCCG 767
|||| ||| | ||||||||||||||| || || ||| || ||||||||||||||| ||||
Sbjct 184 CAATACATTGCGGCTTATGATGGTTTTAAGGTACTC-AGACTTCCTTATCGACAAGGCCG 242
Query 768 TGATGATACCAACCGCAAGTTTTCCATGTATCTCTATCTCCCTGACAAGAAAGGTGAATT 827
||| ||||||||||||| || || |||||| ||||||| || |||||||||||||||||
Sbjct 243 TGACAATACCAACCGCAACTTCTCAATGTATTTCTATCTACCGGACAAGAAAGGTGAATT 302
Query 828 GGATAATCTTTTGGAGAGAATGACATCTACTCCTGGATTCTTGGATAGTCATATTCCGAA 887
|||| ||||||| ||||||||||||||||||||||||||||||||||||| | |||||
Sbjct 303 GGATGATCTTTTAAAGAGAATGACATCTACTCCTGGATTCTTGGATAGTCACACTCCGAG 362
Query 888 ATACCGAGTTGATGTTGGTGATTTCAGAATTCCAAAATTTAAGATCGAATTCGGTTTTGA 947
| | ||||||| || | ||| |||||||||||||| |||||||||||||| || |||||
Sbjct 363 AGAAAGAGTTGAAGTCGATGAATTCAGAATTCCAAAGTTTAAGATCGAATTTGGGTTTGA 422
Query 948 AGCTTCAAGTGTTTTTAATGACGTCTTTGAGCTTAAAGTGTCATTATATCAGAAAGCTTT 1007
||||||||||||||| | |||| | || ||| || | |||||||| || || ||||||||
Sbjct 423 AGCTTCAAGTGTTTTCAGTGAC-T-TT-GAGATTGATGTGTCATTTTACCAAAAAGCTTT 479
Query 1008 GATTGAGATTGATGAAGAAGGTACTGAAGCTGCGGCTGCTACTGCTTTTGTCGTGTGTTT 1067
||||||||| ||||||||||||||||||||||| ||||| ||||||||||| ||
Sbjct 480 GATTGAGATCGATGAAGAAGGTACTGAAGCTGCTGCTGCAACTGCTTTTGT--TGAC--- 534
Query 1068 AACCGGCAGCTG--TGCG-TTTGAGCCGGAGAAGATAGATTTTGTGGCAGAACATCCATT 1124
||| | || || |||| ||| | ||||| | ||||||| |||||||| ||||||||
Sbjct 535 AAC-GA-AGATGGCTGCGGTTTT-GT-GGAGACGTTAGATTTCGTGGCAGATCATCCATT 590
Query 1125 TCTCTTT-TTGATTAGAGAAGA-CAAAACCGGAACTGTTTTGTTCGCTGGTCAAATCTTC 1182
||| ||| |||||||||||||| |||| |||||||||||||||| ||||||||||||||
Sbjct 591 TCT-TTTCTTGATTAGAGAAGAACAAA-CCGGAACTGTTTTGTTTGCTGGTCAAATCTTT 648
Query 1183 GATCCTTC 1190
||||||||
Sbjct 649 GATCCTTC 656
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 63353087790
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5