BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg480397
Length=1101
Score E
Sequences producing significant alignments: (Bits) Value
AT3G44030.1 | Symbols: | pseudogene, similar to OSJNBb0043H09.... 363 3e-99
AT3G30520.1 | Symbols: | unknown protein; BEST Arabidopsis tha... 296 3e-79
AT1G43720.1 | Symbols: | unknown protein; BEST Arabidopsis tha... 268 6e-71
AT1G35820.1 | Symbols: | unknown protein; BEST Arabidopsis tha... 257 1e-67
AT3G42870.1 | Symbols: | unknown protein; BEST Arabidopsis tha... 246 3e-64
> AT3G44030.1 | Symbols: | pseudogene, similar to OSJNBb0043H09.1,
blastp match of 40% identity and 8.4e-38 P-value to GP|21740634|emb|CAD40195.1||AL606611
OSJNBb0043H09.1 {Oryza sativa
(japonica cultivar-group)} | chr3:15803993-15806948 FORWARD
LENGTH=2956
Length=2956
Score = 363 bits (196), Expect = 3e-99
Identities = 297/344 (86%), Gaps = 13/344 (4%)
Strand=Plus/Plus
Query 764 GTGGAGAACACCACCCAATGTTGCACAGTGGGGAACAACACAAAATGCTCCACAATGGGG 823
|||| |||||||| |||| |||||||||| | || ||| ||||| ||||||||||||
Sbjct 1484 GTGGGGAACACCA-CCAA--ATGCACAGTGGAGCACGTCACCAAATGTTCCACAATGGGG 1540
Query 824 AACACCACCAACTGCTCCACAGTGG-GG-AACACCACCAAATACTCCAC-A-GTGGGTCA 879
|| | |||||| ||||||||| ||| || || | || |||| || || | |||| |||
Sbjct 1541 AATATCACCAAATGCTCCACAATGGCGGCAA-A-CAGAAAATTTTCAACAAGGTGGTTCA 1598
Query 880 ACCGGAACAACTCCAACAAATGTTCAATATGGATTTTCAGTTGGAGGCCAAGGAGATGGT 939
| |||||| ||||||||||||||||||||||| |||||||||||||| ||||||||||||
Sbjct 1599 AGCGGAACGACTCCAACAAATGTTCAATATGGTTTTTCAGTTGGAGGTCAAGGAGATGGT 1658
Query 940 GCAAC-AGTAGAAACTTCACCGATCATTCAACGAACATCATCATCCGGTCTCGGTTTCAC 998
||||| | | |||||| |||| || ||||||| |||||||||||| |||||||||||| |
Sbjct 1659 GCAACAACT-GAAACTCCACCAATAATTCAACAAACATCATCATCTGGTCTCGGTTTCCC 1717
Query 999 AAATTATTTTGAAACTGGACAAATGCCACAAACACCTAGACC-GGGAGGTCTCTTCAATA 1057
||||||||||||||||||||||||||||||||||||||||| ||| |||||||| ||||
Sbjct 1718 AAATTATTTTGAAACTGGACAAATGCCACAAACACCTAGACGAGGG-GGTCTCTTTAATA 1776
Query 1058 TTTGGGGAACTCCGAAAGGATCCAATGCAAGTCATCAAAGTGAT 1101
|||||||||||||| |||||||||| ||||||||||| ||||||
Sbjct 1777 TTTGGGGAACTCCGCAAGGATCCAACGCAAGTCATCACAGTGAT 1820
Score = 257 bits (139), Expect = 1e-67
Identities = 172/188 (91%), Gaps = 2/188 (1%)
Strand=Plus/Plus
Query 448 GACACCATCGCTGGCTAT-AGAGAATTCCAACGACAAAGTTTTCAATAACTTCGCCCTGG 506
|||| |||| ||||| | ||||||||||||||||||||||||||| ||||||| ||||
Sbjct 1014 GACAGCATCATTGGCT-TCAGAGAATTCCAACGACAAAGTTTTCAACAACTTCGTTCTGG 1072
Query 507 TGGTTTTGACCAAGATGATTACGATGAATTTAAAAAGGCGGAAGCGATATTCATTGCACT 566
|| ||||||||||||||||||||||||||||||||| |||||||||||||| || || ||
Sbjct 1073 TGCTTTTGACCAAGATGATTACGATGAATTTAAAAAAGCGGAAGCGATATTTATCGCGCT 1132
Query 567 AAATCTTCCCAAGCACACTAGATTTTATTGGGCATGCATTAATGCACTTAAAGAGCTAGT 626
| |||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1133 AGATCTTCCCTAGCACACTAGATTTCATTGGGCATGCATTAATGCACTTAAAGAGCTAGT 1192
Query 627 ATTTTGGC 634
||||||||
Sbjct 1193 ATTTTGGC 1200
Score = 158 bits (85), Expect = 1e-37
Identities = 96/101 (95%), Gaps = 2/101 (2%)
Strand=Plus/Plus
Query 97 GGATGCAAATTAACAAAAAGCTTGAACCGAAAACCGCCTG-AGTTTTGGGACGTGATGCA 155
||||||||||||||||||||||||||||||||||| |||| | ||||||||||| |||||
Sbjct 585 GGATGCAAATTAACAAAAAGCTTGAACCGAAAACCACCTGTA-TTTTGGGACGTAATGCA 643
Query 156 ACGATGTTTCGTATTACATGATGTTCAATCACAATCTCAAC 196
||||||| |||||||||||||||||||||||||||||||||
Sbjct 644 ACGATGTCTCGTATTACATGATGTTCAATCACAATCTCAAC 684
> AT3G30520.1 | Symbols: | unknown protein; BEST Arabidopsis thaliana
protein match is: unknown protein (TAIR:AT3G42870.1);
Has 70 Blast hits to 70 proteins in 9 species: Archae - 0;
Bacteria - 8; Metazoa - 5; Fungi - 0; Plants - 57; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr3:12130340-12132173
FORWARD LENGTH=1194
Length=1194
Score = 296 bits (160), Expect = 3e-79
Identities = 242/279 (87%), Gaps = 15/279 (5%)
Strand=Plus/Plus
Query 764 GTGGAGAACACCACCCAATGTTGCACAGTGGGGAACAACACAAAATGCTCCACAATGGGG 823
||||||||||||||| || |||||||||||||||||| ||| ||| | | |||| || |
Sbjct 882 GTGGAGAACACCACCAAACGTTGCACAGTGGGGAACACCACCAAACGTTGCACAGTGCAG 941
Query 824 AACACCACCAACTGCTCCACAGTGGGGAACACCACCAAATACTCCACAGTGGGTCAACCG 883
||||||||||| ||||||||| |||||||||||||| || | | || | | ||
Sbjct 942 AACACCACCAAATGCTCCACATTGGGGAACACCACC-AA-A-T--GCA------C-A-CG 988
Query 884 GAACAACTCCAACAAATGTTCAATATGGATTTTCAGTTGGAGGCCAAGGAGATGGTGCAA 943
|||| |||||||||||||||||||||||||||||||||||| | |||| |||||||||||
Sbjct 989 GAACGACTCCAACAAATGTTCAATATGGATTTTCAGTTGGATGTCAAGAAGATGGTGCAA 1048
Query 944 C-AGTAGAAACTTCACCGATCATTCAACGAACATCATCATCCGGTCTCGGTTTCACAAAT 1002
| | | |||||| |||| |||||||||| |||||||||||| ||||||||||||||||||
Sbjct 1049 CAACT-GAAACTCCACCAATCATTCAACAAACATCATCATCTGGTCTCGGTTTCACAAAT 1107
Query 1003 TATTTTGAAACTGGACAAATGCCACAAACACCTAGACCG 1041
|||||||||||||||||||||||||||||||||||||||
Sbjct 1108 TATTTTGAAACTGGACAAATGCCACAAACACCTAGACCG 1146
Score = 274 bits (148), Expect = 1e-72
Identities = 179/194 (92%), Gaps = 2/194 (1%)
Strand=Plus/Plus
Query 4 TGGAAAGCTCTTATGCATAAAACTGGCATCACGGTTAATCCTGATACATGTATGATACAT 63
||||||||||||| ||| ||||| |||||||||||| |||||||||||| | | ||| ||
Sbjct 130 TGGAAAGCTCTTACGCACAAAACAGGCATCACGGTTGATCCTGATACATCTTTCATAAAT 189
Query 64 GCATCTGACGCATGGTGGACACAACAAGAGTTCGGATGCAAATTAACAAAAAGCTTGAAC 123
|||||||| |||||||||||| |||||||||| ||||||||||||||||||| |||||||
Sbjct 190 GCATCTGATGCATGGTGGACAGAACAAGAGTTTGGATGCAAATTAACAAAAAACTTGAAC 249
Query 124 CGAAAACCGCCTG-AGTTTTGGGACGTGATGCAACGATGTTTCGTATTACATGATGTTCA 182
||||||||||||| | |||||||||||||||||||||||| |||||||||||||||||||
Sbjct 250 CGAAAACCGCCTGTA-TTTTGGGACGTGATGCAACGATGTCTCGTATTACATGATGTTCA 308
Query 183 ATCACAATCTCAAC 196
||||||||||||||
Sbjct 309 ATCACAATCTCAAC 322
Score = 263 bits (142), Expect = 3e-69
Identities = 216/252 (86%), Gaps = 4/252 (2%)
Strand=Plus/Plus
Query 199 CACGAGCATGCAGTTGATGAAGAGGGCCATGATGACTCATACACTGATAATGGTGACTTT 258
|||||||||| |||||||||||| || | ||| ||||| | | ||| | |||| || |
Sbjct 355 CACGAGCATGGAGTTGATGAAGAAGGTGAAGATTACTCAGATAGTGACAGTGGTAAC-AT 413
Query 259 G-CACAAACAAAGGTTCCTGAGACGCAAGAAGAAGAAGAAGTGTATCGTGTTACTATTGA 317
| ||||||| |||||||||| |||||||||||||||||||||||||||||||| |||||
Sbjct 414 GCCACAAACCGAGGTTCCTGAAACGCAAGAAGAAGAAGAAGTGTATCGTGTTACCATTGA 473
Query 318 TGATGATGAAACGTTCCAACATTCCGCTTCTAGAAGCCAACAGCGAGGTAGGC-AGAATT 376
||||||||||| |||||| |||| ||| ||||||| ||||| |||||||||| | ||||
Sbjct 474 TGATGATGAAATATTCCAAAATTCTGCTGCTAGAAGGCAACAACGAGGTAGGCCA-AATT 532
Query 377 TGCAGTCAACAACTAGACGTGGGAGCAGTGCACACAGATCTGGGGGAAGCTCACGAGTTT 436
| |||||||| |||||||||| || |||||||| |||||||| |||| |||||||||||
Sbjct 533 TTCAGTCAACCGCTAGACGTGGAAGTAGTGCACAAAGATCTGGAGGAACCTCACGAGTTT 592
Query 437 CTATTGGAAGTG 448
||||||||||||
Sbjct 593 CTATTGGAAGTG 604
Score = 257 bits (139), Expect = 1e-67
Identities = 174/191 (91%), Gaps = 2/191 (1%)
Strand=Plus/Plus
Query 448 GACACCATCGCTGGCTAT-AGAGAATTCCAACGACAAAGTTTTCAATAACTTCGCCCTGG 506
|||| |||| || ||| | |||||||||||||||||||||||||| ||||||| ||| |
Sbjct 652 GACAGCATCACTAGCT-TCGGAGAATTCCAACGACAAAGTTTTCAACAACTTCGTCCTCG 710
Query 507 TGGTTTTGACCAAGATGATTACGATGAATTTAAAAAGGCGGAAGCGATATTCATTGCACT 566
|| |||||||||||||||||||||||||||||||||||||||||||||||| | || ||
Sbjct 711 TGCTTTTGACCAAGATGATTACGATGAATTTAAAAAGGCGGAAGCGATATTTACCGCCCT 770
Query 567 AAATCTTCCCAAGCACACTAGATTTTATTGGGCATGCATTAATGCACTTAAAGAGCTAGT 626
| ||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||
Sbjct 771 AGATCTTCCCAAGCACACTAGATTTCATTGGGCATGCATTAATGCACTTAAGGAGCTAGT 830
Query 627 ATTTTGGCCTA 637
|||||||||||
Sbjct 831 ATTTTGGCCTA 841
> AT1G43720.1 | Symbols: | unknown protein; BEST Arabidopsis thaliana
protein match is: unknown protein (TAIR:AT3G42870.1);
Has 51 Blast hits to 51 proteins in 3 species: Archae - 0;
Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 49; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr1:16495080-16496078
FORWARD LENGTH=945
Length=945
Score = 268 bits (145), Expect = 6e-71
Identities = 174/188 (93%), Gaps = 2/188 (1%)
Strand=Plus/Plus
Query 448 GACACCATCGCTGGCTAT-AGAGAATTCCAACGACAAAGTTTTCAATAACTTCGCCCTGG 506
|||| |||| |||||| | ||||||||||||||||||||||||||| ||||||| |||||
Sbjct 322 GACAGCATCACTGGCT-TCAGAGAATTCCAACGACAAAGTTTTCAACAACTTCGTCCTGG 380
Query 507 TGGTTTTGACCAAGATGATTACGATGAATTTAAAAAGGCGGAAGCGATATTCATTGCACT 566
|| |||||| ||||||||||||||||||||||||||||||||||||||||| || || ||
Sbjct 381 TGCTTTTGATCAAGATGATTACGATGAATTTAAAAAGGCGGAAGCGATATTTATCGCGCT 440
Query 567 AAATCTTCCCAAGCACACTAGATTTTATTGGGCATGCATTAATGCACTTAAAGAGCTAGT 626
||||||||| ||||||||||||||| ||||||||||||||||||||||||| ||||||||
Sbjct 441 AAATCTTCCTAAGCACACTAGATTTCATTGGGCATGCATTAATGCACTTAAGGAGCTAGT 500
Query 627 ATTTTGGC 634
||||||||
Sbjct 501 ATTTTGGC 508
Score = 134 bits (72), Expect = 2e-30
Identities = 111/130 (85%), Gaps = 2/130 (2%)
Strand=Plus/Plus
Query 199 CACGAGCATGCAGTTGATGAAGAGGGCCATGATGACTCATACACTGATAATGGTGACTTT 258
|||||||||| |||||||||||| || | ||| ||||| ||| ||||| |||| || |
Sbjct 79 CACGAGCATGGAGTTGATGAAGAAGGTGAAGATTACTCAGACAGTGATAGTGGTAAC-AT 137
Query 259 G-CACAAACAAAGGTTCCTGAGACGCAAGAAGAAGAAGAAGTGTATCGTGTTACTATTGA 317
| || || | |||||||||| |||||||||||||||||||||||||||||||| |||||
Sbjct 138 GCCAGAAGCCGAGGTTCCTGAAACGCAAGAAGAAGAAGAAGTGTATCGTGTTACCATTGA 197
Query 318 TGATGATGAA 327
||||||||||
Sbjct 198 TGATGATGAA 207
Score = 128 bits (69), Expect = 1e-28
Identities = 150/187 (80%), Gaps = 13/187 (7%)
Strand=Plus/Plus
Query 765 TGGAGAACACCACCCAATGTTGCACAGTGGGGA-ACAACACAAAATGCTCCACAATGGGG 823
|||| ||||||| |||| |||||||| |||| || ||| ||||| |||||| |||||
Sbjct 761 TGGAAAACACCA-CCAA--ATGCACAGT-GGGACACGCCACCAAATGTTCCACAGTGGGG 816
Query 824 AACACCACCAACTGCTCCACAGTGG-GG--AACACCACCAAATACTCCAC-A-GTGGGTC 878
| || |||||| |||||||| ||| || |||| | |||| | || | |||| ||
Sbjct 817 ATCATCACCAAAGGCTCCACAATGGCGGCAAACA-GA-AAAAT-TTTAACAAGGTGGTTC 873
Query 879 AACCGGAACAACTCCAACAAATGTTCAATATGGATTTTCAGTTGGAGGCCAAGGAGATGG 938
|| |||||| |||||||||||||||||||||||||||||||||||| | ||||||||| |
Sbjct 874 AAGCGGAACGACTCCAACAAATGTTCAATATGGATTTTCAGTTGGAAGTCAAGGAGATTG 933
Query 939 TGCAACA 945
|| ||||
Sbjct 934 TGTAACA 940
Score = 80.5 bits (43), Expect = 3e-14
Identities = 45/46 (98%), Gaps = 0/46 (0%)
Strand=Plus/Plus
Query 151 ATGCAACGATGTTTCGTATTACATGATGTTCAATCACAATCTCAAC 196
|||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 1 ATGCAACGATGTCTCGTATTACATGATGTTCAATCACAATCTCAAC 46
> AT1G35820.1 | Symbols: | unknown protein; BEST Arabidopsis thaliana
protein match is: unknown protein (TAIR:AT3G30520.1);
Has 30201 Blast hits to 17322 proteins in 780 species: Archae
- 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants
- 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink). | chr1:13308119-13309257 REVERSE LENGTH=864
Length=864
Score = 257 bits (139), Expect = 1e-67
Identities = 173/189 (92%), Gaps = 3/189 (2%)
Strand=Plus/Plus
Query 10 GCTCTTATGCA-TAAAACTGGCATCACGGTTAATCCTGATACATGTATGATACATGCATC 68
||||||| ||| ||||| |||||||||||| |||||||||||| | | ||| |||||||
Sbjct 51 GCTCTTACGCACAAAAACAGGCATCACGGTTGATCCTGATACATCTTTCATAAATGCATC 110
Query 69 TGACGCATGGTGGACACAACAAGAGTTCGGATGCAAATTAACAAAAAGCTTGAACCGAAA 128
||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||
Sbjct 111 TGACGCATGGTGGACTGAACAAGAGTTTGGATGCAAATTAACAAAAAGCTTGAACCGAAA 170
Query 129 ACCGCCTG-AGTTTTGGGACGTGATGCAACGATGTTTCGTATTACATGATGTTCAATCAC 187
|||||||| | |||||||||||||||||||||||| ||||| ||||||||||||||||||
Sbjct 171 ACCGCCTGTA-TTTTGGGACGTGATGCAACGATGTCTCGTAGTACATGATGTTCAATCAC 229
Query 188 AATCTCAAC 196
|||||||||
Sbjct 230 AATCTCAAC 238
Score = 257 bits (139), Expect = 1e-67
Identities = 215/252 (85%), Gaps = 4/252 (2%)
Strand=Plus/Plus
Query 199 CACGAGCATGCAGTTGATGAAGAGGGCCATGATGACTCATACACTGATAATGGTGACTTT 258
|||||||||| |||||||||||| || | ||| ||||| | | ||| | |||| || |
Sbjct 271 CACGAGCATGGAGTTGATGAAGAAGGTGAAGATTACTCAGATAGTGACAGTGGTAAC-AT 329
Query 259 G-CACAAACAAAGGTTCCTGAGACGCAAGAAGAAGAAGAAGTGTATCGTGTTACTATTGA 317
| ||||||| |||||||||| |||||||||||||||||||||||||||||||| |||||
Sbjct 330 GCCACAAACCGAGGTTCCTGAAACGCAAGAAGAAGAAGAAGTGTATCGTGTTACCATTGA 389
Query 318 TGATGATGAAACGTTCCAACATTCCGCTTCTAGAAGCCAACAGCGAGGTAGGC-AGAATT 376
||||||||||| |||||| |||| ||| ||||||| ||||| |||||||||| | ||||
Sbjct 390 TGATGATGAAATATTCCAAAATTCTGCTGCTAGAAGGCAACAACGAGGTAGGCCA-AATT 448
Query 377 TGCAGTCAACAACTAGACGTGGGAGCAGTGCACACAGATCTGGGGGAAGCTCACGAGTTT 436
| |||||| |||||||||| || |||||||| |||||||| ||||||||||||||||
Sbjct 449 TTTGGTCAACCGCTAGACGTGGAAGTAGTGCACAAAGATCTGGAGGAAGCTCACGAGTTT 508
Query 437 CTATTGGAAGTG 448
||||||||||||
Sbjct 509 CTATTGGAAGTG 520
> AT3G42870.1 | Symbols: | unknown protein; BEST Arabidopsis thaliana
protein match is: unknown protein (TAIR:AT3G30520.1);
Has 47 Blast hits to 47 proteins in 2 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 47; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr3:14949456-14951279
FORWARD LENGTH=939
Length=939
Score = 246 bits (133), Expect = 3e-64
Identities = 165/181 (91%), Gaps = 0/181 (0%)
Strand=Plus/Plus
Query 918 AGTTGGAGGCCAAGGAGATGGTGCAACAGTAGAAACTTCACCGATCATTCAACGAACATC 977
||||||| | |||||||||||||||||| | |||||| |||||||||| |||| ||||||
Sbjct 738 AGTTGGAAGTCAAGGAGATGGTGCAACAATGGAAACTCCACCGATCATACAACAAACATC 797
Query 978 ATCATCCGGTCTCGGTTTCACAAATTATTTTGAAACTGGACAAATGCCACAAACACCTAG 1037
|||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 798 ATCATCCGGTGTCGGTTTCACAAATTATTTTGAAACTGGACAAATACCACAAACACCTAG 857
Query 1038 ACCGGGAGGTCTCTTCAATATTTGGGGAACTCCGAAAGGATCCAATGCAAGTCATCAAAG 1097
||| ||||||||||| ||||||| ||||||||| ||||||||||||||| |||||| ||
Sbjct 858 ACCAGGAGGTCTCTTTAATATTTATGGAACTCCGCAAGGATCCAATGCAAATCATCACAG 917
Query 1098 T 1098
|
Sbjct 918 T 918
Score = 241 bits (130), Expect = 1e-62
Identities = 192/222 (86%), Gaps = 4/222 (2%)
Strand=Plus/Plus
Query 229 GATGACTCATACACTGATAATGGTGACTTTG-CACAAACAAAGGTTCCTGAGACGCAAGA 287
||| ||||| ||||||||| |||| || || ||||||| |||||||||| | ||||||
Sbjct 70 GATTACTCAGACACTGATAGTGGTAAC-ATGCCACAAACCGAGGTTCCTGAAATGCAAGA 128
Query 288 AGAAGAAGAAGTGTATCGTGTTACTATTGATGATGATGAAACGTTCCAACATTCCGCTTC 347
|||||||||||||||||||||||| |||||||||||||||| |||||||||| ||| |
Sbjct 129 AGAAGAAGAAGTGTATCGTGTTACCATTGATGATGATGAAATATTCCAACATTGTGCTGC 188
Query 348 TAGAAGCCAACAGCGAGGTAGGC-AGAATTTGCAGTCAACAACTAGACGTGGGAGCAGTG 406
|||||| ||||| |||||||||| | |||||||||||||| ||| ||||| || ||||
Sbjct 189 TAGAAGGCAACAACGAGGTAGGCCA-AATTTGCAGTCAACCGCTAAACGTGAAAGTAGTG 247
Query 407 CACACAGATCTGGGGGAAGCTCACGAGTTTCTATTGGAAGTG 448
|||| |||||||| ||||||||||||||||||||| ||||||
Sbjct 248 CACAAAGATCTGGAGGAAGCTCACGAGTTTCTATTAGAAGTG 289
Score = 209 bits (113), Expect = 4e-53
Identities = 152/169 (90%), Gaps = 9/169 (5%)
Strand=Plus/Plus
Query 466 AGAGAATTCCAACGACAAAGTTTTCAATAACTTCGCCCTGGTGGTTTTGACCAAGATGAT 525
||||||||||||||||||||||||| | | ||||||| ||||||||||||||||
Sbjct 355 AGAGAATTCCAACGACAAAGTTTTC----A--T---CCTGGTGCTTTTGACCAAGATGAT 405
Query 526 TACGATGAATTTAAAAAGGCGGAAGCGATATTCATTGCACTAAATCTTCCCAAGCACACT 585
|||||||||||||||||||||||||||||||| || ||||| |||||||||||||||||
Sbjct 406 TACGATGAATTTAAAAAGGCGGAAGCGATATTTATCCCACTAGATCTTCCCAAGCACACT 465
Query 586 AGATTTTATTGGGCATGCATTAATGCACTTAAAGAGCTAGTATTTTGGC 634
|||||||||||||||||||||||||||||| | |||||||||| |||||
Sbjct 466 AGATTTTATTGGGCATGCATTAATGCACTTGAGGAGCTAGTATATTGGC 514
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 53965585875
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5